@cleocode/core 2026.4.41 → 2026.4.43

package/dist/memory/brain-similarity.js

@@ -1,145 +0,0 @@
-/**
- * BRAIN Vector Similarity Search
- *
- * Provides vector-based KNN search against brain_embeddings vec0 table.
- * Falls back gracefully when no embedding provider is registered or
- * sqlite-vec is unavailable.
- *
- * @task T5388
- * @epic T5149
- */
-import { getBrainAccessor } from '../store/brain-accessor.js';
-import { typedAll } from '../store/typed-query.js';
-import { embedText, isEmbeddingAvailable } from './brain-embedding.js';
-// ============================================================================
-// ID prefix -> table type
-// ============================================================================
-function parseIdPrefix(id) {
-    if (id.startsWith('D-') || /^D\d/.test(id))
-        return 'decision';
-    if (id.startsWith('P-') || /^P\d/.test(id))
-        return 'pattern';
-    if (id.startsWith('L-') || /^L\d/.test(id))
-        return 'learning';
-    if (id.startsWith('O-') || id.startsWith('O') || id.startsWith('CM-'))
-        return 'observation';
-    return null;
-}
-// ============================================================================
-// Implementation
-// ============================================================================
-/**
- * Search for entries similar to a query string using vector similarity.
- *
- * 1. Embeds the query text via the registered embedding provider.
- * 2. Runs KNN query against brain_embeddings vec0 table.
- * 3. Joins with observation/decision/pattern/learning tables for full entries.
- *
- * Returns empty array when embedding is unavailable (graceful fallback).
- *
- * @param query - Text to find similar entries for
- * @param projectRoot - Project root directory
- * @param limit - Maximum results to return (default 10)
- * @returns Array of similar entries ranked by distance (ascending)
- */
-export async function searchSimilar(query, projectRoot, limit) {
-    if (!query || !query.trim())
-        return [];
-    if (!isEmbeddingAvailable())
-        return [];
-    const maxResults = limit ?? 10;
-    // Embed the query text
-    const queryVector = await embedText(query);
-    if (!queryVector)
-        return [];
-    // Ensure brain.db is initialized
-    const { getBrainDb, getBrainNativeDb, isBrainVecLoaded } = await import('../store/brain-sqlite.js');
-    await getBrainDb(projectRoot);
-    const nativeDb = getBrainNativeDb();
-    if (!nativeDb)
-        return [];
-    // Require sqlite-vec for KNN queries
-    if (!isBrainVecLoaded())
-        return [];
-    // Run KNN query against vec0 table
-    let knnRows;
-    try {
-        const stmt = nativeDb.prepare('SELECT id, distance FROM brain_embeddings WHERE embedding MATCH ? ORDER BY distance LIMIT ?');
-        knnRows = typedAll(stmt, new Float32Array(queryVector.buffer, queryVector.byteOffset, queryVector.length), maxResults);
-    }
-    catch {
-        // vec0 query failed — table may not exist or extension not loaded
-        return [];
-    }
-    if (knnRows.length === 0)
-        return [];
-    // Resolve each ID to its full entry
-    const accessor = await getBrainAccessor(projectRoot);
-    const results = [];
-    for (const row of knnRows) {
-        const entryType = parseIdPrefix(row.id);
-        if (!entryType)
-            continue;
-        try {
-            switch (entryType) {
-                case 'observation': {
-                    const entry = await accessor.getObservation(row.id);
-                    if (entry) {
-                        results.push({
-                            id: row.id,
-                            distance: row.distance,
-                            type: 'observation',
-                            title: entry.title,
-                            text: entry.narrative ?? entry.title,
-                        });
-                    }
-                    break;
-                }
-                case 'decision': {
-                    const entry = await accessor.getDecision(row.id);
-                    if (entry) {
-                        results.push({
-                            id: row.id,
-                            distance: row.distance,
-                            type: 'decision',
-                            title: entry.decision,
-                            text: `${entry.decision} — ${entry.rationale}`,
-                        });
-                    }
-                    break;
-                }
-                case 'pattern': {
-                    const entry = await accessor.getPattern(row.id);
-                    if (entry) {
-                        results.push({
-                            id: row.id,
-                            distance: row.distance,
-                            type: 'pattern',
-                            title: entry.pattern,
-                            text: `${entry.pattern} — ${entry.context}`,
-                        });
-                    }
-                    break;
-                }
-                case 'learning': {
-                    const entry = await accessor.getLearning(row.id);
-                    if (entry) {
-                        results.push({
-                            id: row.id,
-                            distance: row.distance,
-                            type: 'learning',
-                            title: entry.insight,
-                            text: `${entry.insight} (source: ${entry.source})`,
-                        });
-                    }
-                    break;
-                }
-            }
-        }
-        catch {
-            // Skip entries that fail to resolve
-        }
-    }
-    return results;
-}
-//# sourceMappingURL=brain-similarity.js.map

package/dist/memory/brain-similarity.js.map

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package/dist/memory/claude-mem-migration.js

@@ -1,277 +0,0 @@
-/**
- * Claude-mem to brain.db migration.
- * Imports observations from ~/.claude-mem/claude-mem.db into brain_observations.
- * Also creates brain_decisions from decision-typed observations and
- * brain_learnings from session_summaries with learned fields.
- *
- * @epic T5149
- * @task T5143
- */
-import { existsSync } from 'node:fs';
-import { createRequire } from 'node:module';
-import { getClaudeMemDbPath } from '../paths.js';
-import { getBrainDb, getBrainNativeDb } from '../store/brain-sqlite.js';
-import { ensureFts5Tables, rebuildFts5Index } from './brain-search.js';
-/** Type-safe wrapper for StatementSync.all(). */
-function typedAll(db, sql) {
-    return db.prepare(sql).all();
-}
-// Runtime-load node:sqlite via createRequire (same pattern as node-sqlite-adapter.ts)
-const _require = createRequire(import.meta.url);
-const { DatabaseSync } = _require('node:sqlite');
-/** Valid observation types in the BRAIN schema. */
-const VALID_OBSERVATION_TYPES = new Set([
-    'discovery',
-    'change',
-    'feature',
-    'bugfix',
-    'decision',
-    'refactor',
-]);
-/**
- * Map a claude-mem observation type to a valid BRAIN observation type.
- * Falls back to 'discovery' for unrecognized types.
- */
-function mapObservationType(type) {
-    if (VALID_OBSERVATION_TYPES.has(type)) {
-        return type;
-    }
-    return 'discovery';
-}
-/**
- * Parse a learned field from claude-mem session_summaries.
- * The field may be a JSON array of strings or a plain string.
- */
-function parseLearned(learned) {
-    try {
-        const parsed = JSON.parse(learned);
-        if (Array.isArray(parsed)) {
-            return parsed.filter((s) => typeof s === 'string' && s.trim()).join('; ');
-        }
-        if (typeof parsed === 'string') {
-            return parsed;
-        }
-        return String(parsed);
-    }
-    catch {
-        // Not valid JSON — treat as plain string
-        return learned;
-    }
-}
-/**
- * Migrate observations from claude-mem's SQLite database into CLEO brain.db.
- *
- * Reads from ~/.claude-mem/claude-mem.db (or a custom path) and inserts into:
- * - brain_observations (all observations, prefixed CM-)
- * - brain_decisions (decision-typed observations, prefixed CMD-)
- * - brain_learnings (session summaries with learned field, prefixed CML-)
- *
- * Idempotent: skips rows whose ID already exists in brain.db.
- * After all inserts, rebuilds FTS5 indexes.
- *
- * @param projectRoot - The CLEO project root (for brain.db resolution)
- * @param options - Migration options
- */
-export async function migrateClaudeMem(projectRoot, options = {}) {
-    const sourcePath = options.sourcePath ?? getClaudeMemDbPath();
-    const dryRun = options.dryRun ?? false;
-    const batchSize = options.batchSize ?? 100;
-    const result = {
-        observationsImported: 0,
-        observationsSkipped: 0,
-        learningsImported: 0,
-        decisionsImported: 0,
-        errors: [],
-        dryRun,
-    };
-    // Validate source database exists
-    if (!existsSync(sourcePath)) {
-        throw new Error(`claude-mem database not found at: ${sourcePath}\n` +
-            `Expected location: ~/.claude-mem/claude-mem.db\n` +
-            `Use --source <path> to specify a custom location.`);
-    }
-    // Open source DB read-only
-    let sourceDb;
-    try {
-        sourceDb = new DatabaseSync(sourcePath, {
-            readOnly: true,
-        });
-    }
-    catch (err) {
-        throw new Error(`Failed to open claude-mem database at ${sourcePath}: ${err instanceof Error ? err.message : String(err)}`);
-    }
-    try {
-        // Initialize brain.db (ensures tables exist via migrations)
-        await getBrainDb(projectRoot);
-        const nativeDb = getBrainNativeDb();
-        if (!nativeDb) {
-            throw new Error('Failed to initialize brain.db — getBrainNativeDb() returned null');
-        }
-        // Ensure FTS5 tables exist for the rebuild at the end
-        ensureFts5Tables(nativeDb);
-        // --- Phase 1: Migrate observations ---
-        const observations = typedAll(sourceDb, 'SELECT * FROM observations ORDER BY id');
-        // Process observations in batches
-        for (let i = 0; i < observations.length; i += batchSize) {
-            const batch = observations.slice(i, i + batchSize);
-            if (!dryRun) {
-                nativeDb.prepare('BEGIN IMMEDIATE').run();
-            }
-            try {
-                for (const row of batch) {
-                    const obsId = `CM-${row.id}`;
-                    // Check if already imported (idempotent)
-                    const existing = nativeDb
-                        .prepare('SELECT id FROM brain_observations WHERE id = ?')
-                        .get(obsId);
-                    if (existing) {
-                        result.observationsSkipped++;
-                        continue;
-                    }
-                    if (dryRun) {
-                        result.observationsImported++;
-                        // Also count decisions in dry run
-                        if (row.type === 'decision') {
-                            result.decisionsImported++;
-                        }
-                        continue;
-                    }
-                    const mappedType = mapObservationType(row.type);
-                    const projectTag = options.project ?? row.project ?? null;
-                    nativeDb
-                        .prepare(`
-            INSERT INTO brain_observations (
-              id, type, title, subtitle, narrative,
-              facts_json, concepts_json, project,
-              files_read_json, files_modified_json,
-              source_type, created_at, updated_at
-            ) VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?)
-          `)
-                        .run(obsId, mappedType, row.title, row.subtitle ?? null, row.narrative ?? null, row.facts ?? null, row.concepts ?? null, projectTag, row.files_read ?? null, row.files_modified ?? null, 'claude-mem', row.created_at ?? null, row.updated_at ?? null);
-                    result.observationsImported++;
-                    // For decision-typed observations, also create a brain_decisions entry
-                    if (row.type === 'decision') {
-                        const decId = `CMD-${row.id}`;
-                        const existingDec = nativeDb
-                            .prepare('SELECT id FROM brain_decisions WHERE id = ?')
-                            .get(decId);
-                        if (!existingDec) {
-                            nativeDb
-                                .prepare(`
-                INSERT INTO brain_decisions (
-                  id, type, decision, rationale, confidence, created_at
-                ) VALUES (?, ?, ?, ?, ?, ?)
-              `)
-                                .run(decId, 'tactical', row.title, row.narrative ?? 'Imported from claude-mem', 'medium', row.created_at ?? null);
-                            result.decisionsImported++;
-                        }
-                    }
-                }
-                if (!dryRun) {
-                    nativeDb.prepare('COMMIT').run();
-                }
-            }
-            catch (err) {
-                if (!dryRun) {
-                    try {
-                        nativeDb.prepare('ROLLBACK').run();
-                    }
-                    catch {
-                        // Ignore rollback errors
-                    }
-                }
-                result.errors.push(`Batch starting at observation ${batch[0]?.id ?? '?'}: ` +
-                    `${err instanceof Error ? err.message : String(err)}`);
-            }
-        }
-        // --- Phase 2: Migrate session_summaries (learned -> brain_learnings) ---
-        let summaries = [];
-        try {
-            summaries = typedAll(sourceDb, 'SELECT * FROM session_summaries ORDER BY id');
-        }
-        catch {
-            // session_summaries table may not exist in all claude-mem versions
-            // This is not an error — just skip
-        }
-        for (let i = 0; i < summaries.length; i += batchSize) {
-            const batch = summaries.slice(i, i + batchSize);
-            if (!dryRun) {
-                nativeDb.prepare('BEGIN IMMEDIATE').run();
-            }
-            try {
-                for (const row of batch) {
-                    if (!row.learned || !row.learned.trim()) {
-                        continue;
-                    }
-                    const learnId = `CML-${row.id}`;
-                    // Check if already imported
-                    const existing = nativeDb
-                        .prepare('SELECT id FROM brain_learnings WHERE id = ?')
-                        .get(learnId);
-                    if (existing) {
-                        // Don't count as skipped — these are separate from observations
-                        continue;
-                    }
-                    const insight = parseLearned(row.learned);
-                    if (!insight.trim()) {
-                        continue;
-                    }
-                    if (dryRun) {
-                        result.learningsImported++;
-                        continue;
-                    }
-                    const source = row.session_id
-                        ? `claude-mem session ${row.session_id}`
-                        : 'claude-mem session';
-                    nativeDb
-                        .prepare(`
-            INSERT INTO brain_learnings (
-              id, insight, source, confidence, actionable, created_at
-            ) VALUES (?, ?, ?, ?, ?, ?)
-          `)
-                        .run(learnId, insight, source, 0.5, 0, // false
-                    row.created_at ?? null);
-                    result.learningsImported++;
-                }
-                if (!dryRun) {
-                    nativeDb.prepare('COMMIT').run();
-                }
-            }
-            catch (err) {
-                if (!dryRun) {
-                    try {
-                        nativeDb.prepare('ROLLBACK').run();
-                    }
-                    catch {
-                        // Ignore rollback errors
-                    }
-                }
-                result.errors.push(`Session summary batch starting at ${batch[0]?.id ?? '?'}: ` +
-                    `${err instanceof Error ? err.message : String(err)}`);
-            }
-        }
-        // --- Phase 3: Rebuild FTS5 indexes ---
-        if (!dryRun &&
-            (result.observationsImported > 0 ||
-                result.learningsImported > 0 ||
-                result.decisionsImported > 0)) {
-            try {
-                rebuildFts5Index(nativeDb);
-            }
-            catch (err) {
-                result.errors.push(`FTS5 rebuild warning: ${err instanceof Error ? err.message : String(err)}`);
-            }
-        }
-    }
-    finally {
-        // Close source DB (read-only, safe to close)
-        try {
-            sourceDb.close();
-        }
-        catch {
-            // Ignore close errors
-        }
-    }
-    return result;
-}
-//# sourceMappingURL=claude-mem-migration.js.map

package/dist/memory/claude-mem-migration.js.map

@@ -1 +0,0 @@
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package/dist/memory/decisions.js

@@ -1,236 +0,0 @@
-/**
- * Decision Memory module for CLEO BRAIN.
- * Uses brain.db via BrainDataAccessor for persistent storage.
- *
- * Provides functions to store, recall, search, and update decisions
- * with sequential ID generation (D001, D002, ...).
- *
- * @task T5155
- * @epic T5149
- */
-import { getBrainAccessor } from '../store/brain-accessor.js';
-import { taskExistsInTasksDb } from '../store/cross-db-cleanup.js';
-import { getDb } from '../store/sqlite.js';
-import { addGraphEdge, upsertGraphNode } from './graph-auto-populate.js';
-import { computeDecisionQuality } from './quality-scoring.js';
-import { detectSupersession, supersedeMemory } from './temporal-supersession.js';
-/**
- * Generate the next sequential decision ID (D001, D002, ...).
- * Reads the highest existing ID from brain_decisions to determine next.
- */
-async function nextDecisionId(projectRoot) {
-    const { getBrainDb } = await import('../store/brain-sqlite.js');
-    const { brainDecisions } = await import('../store/brain-schema.js');
-    const { desc } = await import('drizzle-orm');
-    const db = await getBrainDb(projectRoot);
-    const rows = await db
-        .select({ id: brainDecisions.id })
-        .from(brainDecisions)
-        .orderBy(desc(brainDecisions.id))
-        .limit(1);
-    if (rows.length === 0) {
-        return 'D001';
-    }
-    const lastId = rows[0].id;
-    const num = parseInt(lastId.slice(1), 10);
-    if (Number.isNaN(num)) {
-        return 'D001';
-    }
-    return `D${String(num + 1).padStart(3, '0')}`;
-}
-/**
- * Store a new decision or update an existing one if a duplicate is found.
- * Duplicate detection: same decision text (case-insensitive).
- *
- * @task T5155
- */
-export async function storeDecision(projectRoot, params) {
-    if (!params.decision?.trim()) {
-        throw new Error('Decision text is required');
-    }
-    if (!params.rationale?.trim()) {
-        throw new Error('Rationale is required');
-    }
-    const accessor = await getBrainAccessor(projectRoot);
-    // Check for duplicate (same decision text, case-insensitive)
-    const existing = await accessor.findDecisions({ type: params.type });
-    const duplicate = existing.find((d) => d.decision.toLowerCase() === params.decision.toLowerCase());
-    if (duplicate) {
-        // Update the existing decision
-        const now = new Date().toISOString().replace('T', ' ').slice(0, 19);
-        await accessor.updateDecision(duplicate.id, {
-            rationale: params.rationale.trim(),
-            confidence: params.confidence,
-            outcome: params.outcome ?? duplicate.outcome,
-            alternativesJson: params.alternatives
-                ? JSON.stringify(params.alternatives)
-                : duplicate.alternativesJson,
-            updatedAt: now,
-        });
-        const updated = await accessor.getDecision(duplicate.id);
-        // Refresh the graph node for the updated decision (best-effort).
-        const updatedQuality = computeDecisionQuality({
-            confidence: params.confidence,
-            rationale: params.rationale.trim(),
-            contextTaskId: params.contextTaskId ?? null,
-        });
-        upsertGraphNode(projectRoot, `decision:${duplicate.id}`, 'decision', params.decision.trim().substring(0, 200), updatedQuality, params.decision.trim() + params.rationale.trim(), { type: params.type, confidence: params.confidence }).catch(() => {
-            /* best-effort */
-        });
-        return updated;
-    }
-    // Create new decision with sequential ID
-    const id = await nextDecisionId(projectRoot);
-    // Write-guard: validate cross-db task references before inserting
-    let validEpicId = params.contextEpicId;
-    let validTaskId = params.contextTaskId;
-    if (validEpicId || validTaskId) {
-        const tasksDb = await getDb(projectRoot);
-        if (validEpicId && !(await taskExistsInTasksDb(validEpicId, tasksDb))) {
-            validEpicId = undefined;
-        }
-        if (validTaskId && !(await taskExistsInTasksDb(validTaskId, tasksDb))) {
-            validTaskId = undefined;
-        }
-    }
-    // T549 Wave 1-A: Tier routing for decisions.
-    // Decisions are always medium-term semantic entries — they are intentional acts,
-    // always manually entered via cleo memory decision-store or the CLI.
-    // sourceConfidence = 'owner' (decisions are owner-stated facts by definition)
-    // verified = true (the act of deciding IS verification)
-    // memoryTier = 'medium' (decisions skip short-term; may promote to long after 7d+outcome:success)
-    // memoryType = 'semantic' (decisions are declarative architectural facts)
-    const memoryTier = 'medium';
-    const memoryType = 'semantic';
-    const sourceConfidence = 'owner';
-    const verified = true;
-    // Compute quality score from confidence level, rationale richness, task linkage,
-    // and T549 source multiplier (owner = 1.0, medium tier = +0.05).
-    const qualityScore = computeDecisionQuality({
-        confidence: params.confidence,
-        rationale: params.rationale.trim(),
-        contextTaskId: validTaskId ?? null,
-        sourceConfidence,
-        memoryTier,
-    });
-    const row = {
-        id,
-        type: params.type,
-        decision: params.decision.trim(),
-        rationale: params.rationale.trim(),
-        confidence: params.confidence,
-        outcome: params.outcome,
-        alternativesJson: params.alternatives ? JSON.stringify(params.alternatives) : undefined,
-        contextEpicId: validEpicId,
-        contextTaskId: validTaskId,
-        contextPhase: params.contextPhase,
-        qualityScore,
-        // T549 Wave 1-A: tier/type/confidence assigned at write time
-        memoryTier,
-        memoryType,
-        sourceConfidence,
-        verified,
-    };
-    const saved = await accessor.addDecision(row);
-    // Auto-populate graph node + edges for the new decision (best-effort, T537).
-    // All graph writes run fire-and-forget so they never block the return.
-    try {
-        await upsertGraphNode(projectRoot, `decision:${saved.id}`, 'decision', saved.decision.substring(0, 200), qualityScore, saved.decision + saved.rationale, { type: saved.type, confidence: saved.confidence });
-        // Link decision → task when a task context is present.
-        if (validTaskId) {
-            await upsertGraphNode(projectRoot, `task:${validTaskId}`, 'task', validTaskId, 1.0, '');
-            await addGraphEdge(projectRoot, `decision:${saved.id}`, `task:${validTaskId}`, 'applies_to', 1.0, 'auto:store-decision');
-        }
-        // Link decision → epic when an epic context is present.
-        if (validEpicId) {
-            await upsertGraphNode(projectRoot, `epic:${validEpicId}`, 'epic', validEpicId, 1.0, '');
-            await addGraphEdge(projectRoot, `decision:${saved.id}`, `epic:${validEpicId}`, 'applies_to', 1.0, 'auto:store-decision');
-        }
-    }
-    catch {
-        /* Graph population is best-effort — never block the primary return */
-    }
-    // Detect supersession: check if this new decision supersedes any existing ones.
-    // Fire-and-forget — never block the primary return.
-    detectSupersession(projectRoot, {
-        id: saved.id,
-        text: saved.decision + ' ' + saved.rationale,
-        createdAt: saved.createdAt ?? new Date().toISOString().replace('T', ' ').slice(0, 19),
-    })
-        .then((candidates) => {
-        for (const candidate of candidates) {
-            supersedeMemory(projectRoot, candidate.existingId, saved.id, 'auto:decision-supersedes — high overlap detected at store time').catch(() => {
-                /* best-effort */
-            });
-        }
-    })
-        .catch(() => {
-        /* best-effort */
-    });
-    return saved;
-}
-/**
- * Recall a specific decision by ID.
- *
- * @task T5155
- */
-export async function recallDecision(projectRoot, id) {
-    const accessor = await getBrainAccessor(projectRoot);
-    return accessor.getDecision(id);
-}
-/**
- * Search decisions by type, confidence, outcome, and/or free-text query.
- * Query searches across decision + rationale fields using LIKE.
- *
- * @task T5155
- */
-export async function searchDecisions(projectRoot, params = {}) {
-    const accessor = await getBrainAccessor(projectRoot);
-    // Use the accessor for structured filters
-    let results = await accessor.findDecisions({
-        type: params.type,
-        confidence: params.confidence,
-        outcome: params.outcome ?? undefined,
-        limit: params.query ? undefined : params.limit,
-    });
-    // Apply free-text search on top
-    if (params.query) {
-        const q = params.query.toLowerCase();
-        results = results.filter((d) => d.decision.toLowerCase().includes(q) || d.rationale.toLowerCase().includes(q));
-    }
-    if (params.limit && params.limit > 0) {
-        results = results.slice(0, params.limit);
-    }
-    return results;
-}
-/**
- * List decisions with pagination.
- *
- * @task T5155
- */
-export async function listDecisions(projectRoot, params = {}) {
-    const accessor = await getBrainAccessor(projectRoot);
-    // Get all decisions for total count
-    const all = await accessor.findDecisions({});
-    const total = all.length;
-    const offset = params.offset ?? 0;
-    const limit = params.limit ?? 50;
-    const decisions = all.slice(offset, offset + limit);
-    return { decisions, total };
-}
-/**
- * Update the outcome of a decision after learning from results.
- *
- * @task T5155
- */
-export async function updateDecisionOutcome(projectRoot, id, outcome) {
-    const accessor = await getBrainAccessor(projectRoot);
-    const existing = await accessor.getDecision(id);
-    if (!existing) {
-        throw new Error(`Decision not found: ${id}`);
-    }
-    await accessor.updateDecision(id, { outcome });
-    const updated = await accessor.getDecision(id);
-    return updated;
-}
-//# sourceMappingURL=decisions.js.map