@cleocode/core 2026.3.58 → 2026.3.59

package/dist/store/git-checkpoint.js

@@ -1,365 +0,0 @@
-/**
- * Git checkpoint system for CLEO state files.
- * Ported from lib/data/git-checkpoint.sh
- *
- * Opt-in automatic git commits of .cleo/ state files at semantic
- * boundaries (save_json, session end) with debounce to prevent commit noise.
- * All git errors are suppressed - checkpointing is never fatal.
- *
- * @task T4552
- * @task T4872
- * @epic T4545
- */
-import { execFile } from 'node:child_process';
-import { existsSync } from 'node:fs';
-import { readFile, writeFile } from 'node:fs/promises';
-import { join, resolve } from 'node:path';
-import { promisify } from 'node:util';
-import { getCleoDir, getConfigPath } from '../paths.js';
-import { readJson } from './json.js';
-const execFileAsync = promisify(execFile);
-/**
- * Build environment variables that point git at the isolated .cleo/.git repo.
- * @task T4872
- */
-export function makeCleoGitEnv(cleoDir) {
-    // resolve() ensures GIT_DIR and GIT_WORK_TREE are absolute even when cleoDir
-    // is a relative path (e.g. '.cleo' returned by getCleoDir() with no cwd arg)
-    const abs = resolve(cleoDir);
-    return {
-        ...process.env,
-        GIT_DIR: join(abs, '.git'),
-        GIT_WORK_TREE: abs,
-    };
-}
-/**
- * Run a git command against the isolated .cleo/.git repo, suppressing errors.
- * @task T4872
- */
-export async function cleoGitCommand(args, cleoDir) {
-    try {
-        const result = await execFileAsync('git', args, {
-            cwd: resolve(cleoDir), // absolute cwd so relative paths in args resolve correctly
-            env: makeCleoGitEnv(cleoDir),
-            timeout: 10_000,
-        });
-        return { stdout: result.stdout.trim(), success: true };
-    }
-    catch {
-        return { stdout: '', success: false };
-    }
-}
-/**
- * Check whether the isolated .cleo/.git repo has been initialized.
- * @task T4872
- */
-export function isCleoGitInitialized(cleoDir) {
-    return existsSync(join(cleoDir, '.git', 'HEAD'));
-}
-/**
- * Core state files and directories eligible for checkpointing (relative to .cleo/).
- *
- * Only human-editable JSON config files (per ADR-006) and documentation
- * output directories. All operational data lives in tasks.db (SQLite).
- * tasks.db is excluded from git — backed up via VACUUM INTO rotation instead.
- *
- * Directory entries (trailing slash) are passed directly to git; git handles
- * them recursively for add/diff/ls-files operations.
- *
- * Users can add custom entries via config.json `checkpoint.stateFileAllowlist`.
- */
-const STATE_FILES = [
-    // Human-editable config files (ADR-006: JSON retained for human-editable config only)
-    'config.json',
-    'project-info.json',
-    'project-context.json',
-    // Architecture decisions and research outputs (docs, never in SQLite)
-    'adrs/',
-    'agent-outputs/',
-];
-/**
- * Load additional state file paths from config.json `checkpoint.stateFileAllowlist`.
- * Returns an empty array if config is missing, malformed, or the key is absent.
- */
-export async function loadStateFileAllowlist(cwd) {
-    try {
-        const configPath = getConfigPath(cwd);
-        const config = await readJson(configPath);
-        const checkpoint = config?.checkpoint;
-        const allowlist = checkpoint?.stateFileAllowlist;
-        if (!Array.isArray(allowlist))
-            return [];
-        // Filter to strings only, ignore non-string entries
-        return allowlist.filter((entry) => typeof entry === 'string');
-    }
-    catch {
-        return [];
-    }
-}
-/**
- * Get the full list of state files: core defaults merged with config allowlist.
- */
-async function getAllStateFiles(cwd) {
-    const custom = await loadStateFileAllowlist(cwd);
-    const all = [...STATE_FILES, ...custom];
-    // Deduplicate
-    return [...new Set(all)];
-}
-/** Debounce state file name (relative to .cleo/). */
-const CHECKPOINT_STATE_FILE = '.git-checkpoint-state';
-/**
- * Load checkpoint configuration from config.json.
- * @task T4552
- */
-export async function loadCheckpointConfig(cwd) {
-    try {
-        const configPath = getConfigPath(cwd);
-        const config = await readJson(configPath);
-        const gc = config?.gitCheckpoint;
-        return {
-            enabled: gc?.enabled !== false,
-            debounceMinutes: typeof gc?.debounceMinutes === 'number' ? gc.debounceMinutes : 5,
-            messagePrefix: typeof gc?.messagePrefix === 'string' ? gc.messagePrefix : 'chore(cleo):',
-            noVerify: gc?.noVerify !== false,
-        };
-    }
-    catch {
-        return {
-            enabled: true,
-            debounceMinutes: 5,
-            messagePrefix: 'chore(cleo):',
-            noVerify: true,
-        };
-    }
-}
-/**
- * Check if the isolated .cleo/.git repo is a valid git work tree.
- * @task T4552
- * @task T4872
- */
-async function isCleoGitRepo(cleoDir) {
-    const result = await cleoGitCommand(['rev-parse', '--is-inside-work-tree'], cleoDir);
-    // On a freshly initialized empty repo, git returns "false" (no commits yet) but
-    // the repo is still valid for staging + committing. Fall back to existsSync check.
-    return result.success && (result.stdout === 'true' || isCleoGitInitialized(cleoDir));
-}
-/**
- * Check if a merge is in progress in the .cleo/.git repo.
- * @task T4552
- * @task T4872
- */
-function isMergeInProgress(cleoDir) {
-    return existsSync(join(cleoDir, '.git', 'MERGE_HEAD'));
-}
-/**
- * Check if HEAD is detached in the .cleo/.git repo.
- * @task T4552
- * @task T4872
- */
-async function isDetachedHead(cleoDir) {
-    const result = await cleoGitCommand(['symbolic-ref', 'HEAD'], cleoDir);
-    return !result.success;
-}
-/**
- * Check if a rebase is in progress in the .cleo/.git repo.
- * @task T4552
- * @task T4872
- */
-function isRebaseInProgress(cleoDir) {
-    return (existsSync(join(cleoDir, '.git', 'rebase-merge')) ||
-        existsSync(join(cleoDir, '.git', 'rebase-apply')));
-}
-/**
- * Record the current time as the last checkpoint time.
- * @task T4552
- */
-async function recordCheckpointTime(cleoDir) {
-    try {
-        const stateFile = join(cleoDir, CHECKPOINT_STATE_FILE);
-        await writeFile(stateFile, String(Math.floor(Date.now() / 1000)));
-    }
-    catch {
-        // Non-fatal
-    }
-}
-/**
- * Get the epoch time of the last checkpoint.
- * @task T4552
- */
-async function getLastCheckpointTime(cleoDir) {
-    try {
-        const stateFile = join(cleoDir, CHECKPOINT_STATE_FILE);
-        const content = await readFile(stateFile, 'utf-8');
-        const epoch = parseInt(content.trim(), 10);
-        return Number.isNaN(epoch) ? 0 : epoch;
-    }
-    catch {
-        return 0;
-    }
-}
-/**
- * Get list of state files with pending changes in the .cleo/.git repo.
- * Paths are relative to cleoDir (the git work tree).
- * @task T4552
- * @task T4872
- */
-async function getChangedStateFiles(cleoDir, cwd) {
-    const changed = [];
-    const allStateFiles = await getAllStateFiles(cwd);
-    for (const stateFile of allStateFiles) {
-        const fullPath = join(cleoDir, stateFile);
-        if (!existsSync(fullPath))
-            continue;
-        // Check for staged or unstaged changes (paths relative to cleoDir work tree)
-        const diffResult = await cleoGitCommand(['diff', '--quiet', '--', stateFile], cleoDir);
-        const cachedResult = await cleoGitCommand(['diff', '--cached', '--quiet', '--', stateFile], cleoDir);
-        const untrackedResult = await cleoGitCommand(['ls-files', '--others', '--exclude-standard', '--', stateFile], cleoDir);
-        if (!diffResult.success || !cachedResult.success) {
-            changed.push({ path: stateFile, status: 'modified' });
-        }
-        else if (untrackedResult.stdout.length > 0) {
-            changed.push({ path: stateFile, status: 'untracked' });
-        }
-    }
-    return changed;
-}
-/**
- * Check whether a checkpoint should be performed.
- * Evaluates: enabled, .cleo/.git initialized, debounce elapsed, files changed.
- * @task T4552
- * @task T4872
- */
-export async function shouldCheckpoint(options) {
-    const force = options?.force ?? false;
-    const cwd = options?.cwd;
-    // Suppression check (even force doesn't override explicit suppression)
-    if (process.env['GIT_CHECKPOINT_SUPPRESS'] === 'true') {
-        return false;
-    }
-    const config = await loadCheckpointConfig(cwd);
-    if (!config.enabled)
-        return false;
-    const cleoDir = getCleoDir(cwd);
-    if (!existsSync(cleoDir))
-        return false;
-    // Guard: .cleo/.git must be initialized (run `cleo init` to enable checkpointing)
-    if (!isCleoGitInitialized(cleoDir))
-        return false;
-    if (!(await isCleoGitRepo(cleoDir)))
-        return false;
-    if (isMergeInProgress(cleoDir))
-        return false;
-    if (await isDetachedHead(cleoDir))
-        return false;
-    if (isRebaseInProgress(cleoDir))
-        return false;
-    // Check debounce (unless forced)
-    if (!force) {
-        const lastCheckpoint = await getLastCheckpointTime(cleoDir);
-        const now = Math.floor(Date.now() / 1000);
-        const elapsed = now - lastCheckpoint;
-        const debounceSeconds = config.debounceMinutes * 60;
-        if (elapsed < debounceSeconds)
-            return false;
-    }
-    // Check if any state files have changes
-    const changed = await getChangedStateFiles(cleoDir, cwd);
-    return changed.length > 0;
-}
-/**
- * Stage .cleo/ state files and commit to the isolated .cleo/.git repo.
- * Never fatal - all git errors are suppressed.
- * @task T4552
- * @task T4872
- */
-export async function gitCheckpoint(trigger = 'auto', context, cwd) {
-    // Suppression check
-    if (process.env['GIT_CHECKPOINT_SUPPRESS'] === 'true') {
-        return;
-    }
-    const force = trigger === 'manual';
-    if (!(await shouldCheckpoint({ force, cwd }))) {
-        return;
-    }
-    const config = await loadCheckpointConfig(cwd);
-    const cleoDir = getCleoDir(cwd);
-    const changed = await getChangedStateFiles(cleoDir, cwd);
-    if (changed.length === 0)
-        return;
-    // Stage changed files (paths are relative to cleoDir work tree)
-    let stagedCount = 0;
-    for (const file of changed) {
-        const result = await cleoGitCommand(['add', file.path], cleoDir);
-        if (result.success)
-            stagedCount++;
-    }
-    if (stagedCount === 0)
-        return;
-    // Build commit message
-    let commitMsg = `${config.messagePrefix} ${trigger} checkpoint`;
-    if (context) {
-        commitMsg = `${config.messagePrefix} ${trigger} checkpoint (${context})`;
-    }
-    // Build commit args
-    const commitArgs = ['commit', '-m', commitMsg];
-    if (config.noVerify) {
-        commitArgs.push('--no-verify');
-    }
-    // Restrict commit to only the staged state files (prevents sweeping pre-staged project files)
-    commitArgs.push('--', ...changed.map((f) => f.path));
-    // Commit to .cleo/.git
-    const commitResult = await cleoGitCommand(commitArgs, cleoDir);
-    if (!commitResult.success) {
-        // If commit failed, unstage our changes
-        for (const file of changed) {
-            await cleoGitCommand(['reset', 'HEAD', '--', file.path], cleoDir);
-        }
-        return;
-    }
-    // Record checkpoint time
-    await recordCheckpointTime(cleoDir);
-}
-/**
- * Show checkpoint configuration and status.
- * @task T4552
- * @task T4872
- */
-export async function gitCheckpointStatus(cwd) {
-    const config = await loadCheckpointConfig(cwd);
-    const cleoDir = getCleoDir(cwd);
-    const lastCheckpoint = await getLastCheckpointTime(cleoDir);
-    let lastCheckpointIso = 'never';
-    if (lastCheckpoint !== 0) {
-        lastCheckpointIso = new Date(lastCheckpoint * 1000).toISOString();
-    }
-    const isRepo = isCleoGitInitialized(cleoDir) && (await isCleoGitRepo(cleoDir));
-    let pendingChanges = 0;
-    if (isRepo) {
-        const changed = await getChangedStateFiles(cleoDir, cwd);
-        pendingChanges = changed.length;
-    }
-    const suppressed = process.env['GIT_CHECKPOINT_SUPPRESS'] === 'true';
-    return {
-        config,
-        status: {
-            isGitRepo: isRepo,
-            lastCheckpoint: lastCheckpointIso,
-            lastCheckpointEpoch: lastCheckpoint,
-            pendingChanges,
-            suppressed,
-        },
-    };
-}
-/**
- * Show what files would be committed (dry-run).
- * @task T4552
- * @task T4872
- */
-export async function gitCheckpointDryRun(cwd) {
-    const cleoDir = getCleoDir(cwd);
-    const isRepo = isCleoGitInitialized(cleoDir) && (await isCleoGitRepo(cleoDir));
-    if (!isRepo)
-        return [];
-    return getChangedStateFiles(cleoDir, cwd);
-}
-//# sourceMappingURL=git-checkpoint.js.map

package/dist/store/git-checkpoint.js.map

@@ -1 +0,0 @@
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package/dist/store/import-logging.js

@@ -1,139 +0,0 @@
-/**
- * Import-specific logging functions for CLEO system.
- * Ported from lib/data/import-logging.sh
- *
- * Provides structured audit logging for import operations including
- * start, success, error, and conflict events.
- *
- * @task T4552
- * @epic T4545
- */
-import { getLogPath } from '../paths.js';
-import { appendJsonl, readJson } from './json.js';
-/**
- * Generate a log entry ID.
- * @task T4552
- */
-function generateLogId() {
-    const epoch = Math.floor(Date.now() / 1000);
-    const rand = Math.random().toString(36).slice(2, 8);
-    return `log-${epoch}-${rand}`;
-}
-/**
- * Extract package metadata from an export file.
- * @task T4552
- */
-export async function extractPackageMeta(sourceFilePath) {
-    const data = await readJson(sourceFilePath);
-    const meta = data?._meta;
-    return {
-        sourceFile: sourceFilePath.split('/').pop() ?? sourceFilePath,
-        sourceProject: meta?.source?.project ?? 'unknown',
-        exportedAt: meta?.exportedAt ?? 'unknown',
-        packageChecksum: meta?.checksum ?? 'unknown',
-        taskCount: typeof meta?.taskCount === 'number' ? meta.taskCount : 0,
-    };
-}
-/**
- * Write a log entry to the log file.
- * @task T4552
- */
-async function writeLogEntry(action, taskId, details, sessionId, cwd) {
-    const logPath = getLogPath(cwd);
-    const entry = {
-        id: generateLogId(),
-        timestamp: new Date().toISOString(),
-        action,
-        taskId,
-        actor: 'system',
-        details,
-        sessionId: sessionId ?? null,
-    };
-    try {
-        await appendJsonl(logPath, entry);
-    }
-    catch {
-        // Log failure is non-fatal
-    }
-}
-/**
- * Log import operation start with package metadata.
- * @task T4552
- */
-export async function logImportStart(sourceFilePath, sessionId, cwd) {
-    let meta;
-    try {
-        meta = await extractPackageMeta(sourceFilePath);
-    }
-    catch {
-        meta = {
-            sourceFile: sourceFilePath.split('/').pop() ?? sourceFilePath,
-            sourceProject: 'unknown',
-            exportedAt: 'unknown',
-            packageChecksum: 'unknown',
-            taskCount: 0,
-        };
-    }
-    await writeLogEntry('import', null, {
-        ...meta,
-        stage: 'start',
-    }, sessionId, cwd);
-}
-/**
- * Log import operation completion with full metadata.
- * @task T4552
- */
-export async function logImportSuccess(sourceFilePath, tasksImported, idRemap, conflicts, options, sessionId, cwd) {
-    let meta;
-    try {
-        meta = await extractPackageMeta(sourceFilePath);
-    }
-    catch {
-        meta = {
-            sourceFile: sourceFilePath.split('/').pop() ?? sourceFilePath,
-            sourceProject: 'unknown',
-            exportedAt: 'unknown',
-            packageChecksum: 'unknown',
-            taskCount: 0,
-        };
-    }
-    await writeLogEntry('import', null, {
-        sourceFile: meta.sourceFile,
-        sourceProject: meta.sourceProject,
-        exportedAt: meta.exportedAt,
-        packageChecksum: meta.packageChecksum,
-        importedAt: new Date().toISOString(),
-        tasksImported,
-        idRemap,
-        conflicts: conflicts ?? [],
-        options: options ?? {},
-        stage: 'success',
-    }, sessionId, cwd);
-}
-/**
- * Log import operation error with diagnostic details.
- * @task T4552
- */
-export async function logImportError(sourceFilePath, errorMessage, errorCode, stage = 'unknown', sessionId, cwd) {
-    await writeLogEntry('error_occurred', null, {
-        sourceFile: sourceFilePath.split('/').pop() ?? sourceFilePath,
-        stage,
-        error: {
-            message: errorMessage,
-            code: String(errorCode),
-            timestamp: new Date().toISOString(),
-        },
-    }, sessionId, cwd);
-}
-/**
- * Log import conflict detection and resolution.
- * @task T4552
- */
-export async function logImportConflict(conflictType, taskId, conflictDetails, resolution, sessionId, cwd) {
-    await writeLogEntry('task_updated', taskId, {
-        conflictType,
-        resolution,
-        details: conflictDetails,
-    }, sessionId, cwd);
-}
-//# sourceMappingURL=import-logging.js.map

package/dist/store/import-logging.js.map

@@ -1 +0,0 @@
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package/dist/store/import-remap.js

@@ -1,145 +0,0 @@
-/**
- * ID remapping logic for import system.
- * Ported from lib/data/import-remap.sh
- *
- * @epic T4454
- * @task T4530
- */
-/**
- * Get the next available task ID number from existing tasks.
- */
-export function getNextAvailableId(tasks) {
-    if (tasks.length === 0)
-        return 1;
-    const maxId = tasks.reduce((max, t) => {
-        const num = parseInt(t.id.replace('T', ''), 10);
-        return Number.isNaN(num) ? max : Math.max(max, num);
-    }, 0);
-    return maxId + 1;
-}
-/**
- * Generate a remap table for importing tasks.
- * Maps source task IDs to new sequential IDs starting from nextAvailable.
- */
-export function generateRemapTable(sourceTaskIds, existingTasks) {
-    const forward = new Map();
-    const reverse = new Map();
-    let nextId = getNextAvailableId(existingTasks);
-    for (const sourceId of sourceTaskIds) {
-        const newId = `T${String(nextId).padStart(3, '0')}`;
-        forward.set(sourceId, newId);
-        reverse.set(newId, sourceId);
-        nextId++;
-    }
-    return { forward, reverse };
-}
-/**
- * Validate that a remap table is complete and consistent.
- */
-export function validateRemapTable(table, expectedSourceIds) {
-    const errors = [];
-    // Check completeness
-    for (const id of expectedSourceIds) {
-        if (!table.forward.has(id)) {
-            errors.push(`Missing mapping for source ID: ${id}`);
-        }
-    }
-    // Check consistency
-    for (const [source, target] of table.forward) {
-        const reverseSource = table.reverse.get(target);
-        if (reverseSource !== source) {
-            errors.push(`Inconsistent mapping: ${source} -> ${target} -> ${reverseSource}`);
-        }
-    }
-    // Check ID format
-    for (const newId of table.reverse.keys()) {
-        if (!/^T\d{3,}$/.test(newId)) {
-            errors.push(`Invalid new task ID format: ${newId}`);
-        }
-    }
-    return { valid: errors.length === 0, errors };
-}
-/**
- * Remap a single task ID, returning original if not in table.
- */
-export function remapTaskId(taskId, table) {
-    if (!taskId)
-        return null;
-    return table.forward.get(taskId) ?? taskId;
-}
-/**
- * Remap all ID references in a task.
- */
-export function remapTaskReferences(task, table, existingTaskIds, missingDepStrategy = 'strip') {
-    const newId = table.forward.get(task.id);
-    if (!newId)
-        throw new Error(`No mapping for task ${task.id}`);
-    // Remap parent
-    let newParentId;
-    if (task.parentId) {
-        if (table.forward.has(task.parentId)) {
-            newParentId = table.forward.get(task.parentId);
-        }
-        else if (existingTaskIds.has(task.parentId)) {
-            newParentId = task.parentId;
-        }
-        else {
-            newParentId = null; // Orphan
-        }
-    }
-    // Remap dependencies
-    let newDepends;
-    if (task.depends?.length) {
-        newDepends = [];
-        for (const dep of task.depends) {
-            if (table.forward.has(dep)) {
-                newDepends.push(table.forward.get(dep));
-            }
-            else if (existingTaskIds.has(dep)) {
-                newDepends.push(dep);
-            }
-            else if (missingDepStrategy === 'fail') {
-                throw new Error(`Missing dependency ${dep} for task ${task.id}`);
-            }
-            // 'strip' strategy: just skip missing deps
-        }
-    }
-    return {
-        ...task,
-        id: newId,
-        ...(newParentId !== undefined ? { parentId: newParentId } : {}),
-        ...(newDepends !== undefined ? { depends: newDepends } : {}),
-    };
-}
-/**
- * Detect duplicate titles between import and target.
- */
-export function detectDuplicateTitles(importTasks, existingTasks) {
-    const titleMap = new Map();
-    for (const t of existingTasks) {
-        titleMap.set(t.title.toLowerCase(), t.id);
-    }
-    const conflicts = [];
-    for (const t of importTasks) {
-        const existing = titleMap.get(t.title.toLowerCase());
-        if (existing) {
-            conflicts.push({ sourceId: t.id, title: t.title, existingId: existing });
-        }
-    }
-    return conflicts;
-}
-/**
- * Resolve duplicate title by appending suffix.
- */
-export function resolveDuplicateTitle(title, existingTitles) {
-    let candidate = `${title} (imported)`;
-    if (!existingTitles.has(candidate.toLowerCase()))
-        return candidate;
-    for (let i = 2; i <= 1000; i++) {
-        candidate = `${title} (imported-${i})`;
-        if (!existingTitles.has(candidate.toLowerCase()))
-            return candidate;
-    }
-    return candidate;
-}
-//# sourceMappingURL=import-remap.js.map

package/dist/store/import-remap.js.map

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