@cleocode/core 2026.3.37 → 2026.3.39

package/src/memory/claude-mem-migration.ts

@@ -12,13 +12,16 @@ import { existsSync } from 'node:fs';
 import { createRequire } from 'node:module';
 // underscore-import: node:sqlite type alias is required for createRequire interop.
 import type { DatabaseSync as _DatabaseSyncType } from 'node:sqlite';
+import { getClaudeMemDbPath } from '../paths.js';
 import type { BRAIN_OBSERVATION_TYPES } from '../store/brain-schema.js';
 import { getBrainDb, getBrainNativeDb } from '../store/brain-sqlite.js';
-import { getClaudeMemDbPath } from '../paths.js';
 import { ensureFts5Tables, rebuildFts5Index } from './brain-search.js';
 
 /** Type-safe wrapper for StatementSync.all(). */
-function typedAll<T>(db: { prepare(sql: string): { all(...args: unknown[]): unknown[] } }, sql: string): T[] {
+function typedAll<T>(
+  db: { prepare(sql: string): { all(...args: unknown[]): unknown[] } },
+  sql: string,
+): T[] {
   return db.prepare(sql).all() as T[];
 }
 
@@ -181,7 +184,10 @@ export async function migrateClaudeMem(
     ensureFts5Tables(nativeDb);
 
     // --- Phase 1: Migrate observations ---
-    const observations = typedAll<ClaudeMemObservation>(sourceDb, 'SELECT * FROM observations ORDER BY id');
+    const observations = typedAll<ClaudeMemObservation>(
+      sourceDb,
+      'SELECT * FROM observations ORDER BY id',
+    );
 
     // Process observations in batches
     for (let i = 0; i < observations.length; i += batchSize) {
@@ -291,7 +297,10 @@ export async function migrateClaudeMem(
     // --- Phase 2: Migrate session_summaries (learned -> brain_learnings) ---
     let summaries: ClaudeMemSessionSummary[] = [];
     try {
-      summaries = typedAll<ClaudeMemSessionSummary>(sourceDb, 'SELECT * FROM session_summaries ORDER BY id');
+      summaries = typedAll<ClaudeMemSessionSummary>(
+        sourceDb,
+        'SELECT * FROM session_summaries ORDER BY id',
+      );
     } catch {
       // session_summaries table may not exist in all claude-mem versions
       // This is not an error — just skip

package/src/memory/engine-compat.ts

@@ -13,16 +13,12 @@
  * @epic T5149
  */
 
+import type { BrainEntrySummary, ContradictionDetail, SupersededEntry } from '@cleocode/contracts';
+import type { EngineResult } from '../engine-result.js';
+import { getProjectRoot } from '../paths.js';
 // BRAIN accessor for direct table queries (T5241)
 import { getBrainAccessor } from '../store/brain-accessor.js';
 import { getAccessor } from '../store/data-accessor.js';
-import type { EngineResult } from '../engine-result.js';
-import { getProjectRoot } from '../paths.js';
-import type {
-  BrainEntrySummary,
-  ContradictionDetail,
-  SupersededEntry,
-} from '@cleocode/contracts';
 import { linkMemoryToTask, unlinkMemoryFromTask } from './brain-links.js';
 // BRAIN retrieval imports (T5131-T5135)
 import {
@@ -779,10 +775,7 @@ export async function memorySuperseded(
     const superseded: SupersededEntry[] = [];
 
     // Helper to normalize and group by key
-    const addSuperseded = (
-      entries: BrainEntrySummary[],
-      groupKey: string,
-    ) => {
+    const addSuperseded = (entries: BrainEntrySummary[], groupKey: string) => {
       if (entries.length < 2) return;
 
       // Sort by creation date (oldest first)

package/src/memory/index.ts

@@ -6,9 +6,6 @@
 
 import { existsSync, readFileSync } from 'node:fs';
 import { join, resolve } from 'node:path';
-import { atomicWrite, safeReadFile } from '../store/atomic.js';
-import type { DataAccessor } from '../store/data-accessor.js';
-import { appendJsonl, readJson, saveJson } from '../store/json.js';
 import { ExitCode } from '@cleocode/contracts';
 import { CleoError } from '../errors.js';
 import {
@@ -18,6 +15,9 @@ import {
   getManifestArchivePath,
   getProjectRoot,
 } from '../paths.js';
+import { atomicWrite, safeReadFile } from '../store/atomic.js';
+import type { DataAccessor } from '../store/data-accessor.js';
+import { appendJsonl, readJson, saveJson } from '../store/json.js';
 import { logOperation } from '../tasks/add.js';
 
 /** Research entry attached to a task. */

package/src/memory/memory-bridge.ts

@@ -288,9 +288,11 @@ async function getLastHandoffSafe(
 
 function queryRecentDecisions(db: DatabaseSync, limit: number): DecisionRow[] {
   try {
-    return typedAll<DecisionRow>(db,
+    return typedAll<DecisionRow>(
+      db,
       'SELECT id, decision, created_at FROM brain_decisions ORDER BY created_at DESC LIMIT ?',
-      limit);
+      limit,
+    );
   } catch {
     return [];
   }
@@ -300,12 +302,14 @@ function queryHighConfidenceLearnings(db: DatabaseSync, limit: number): Learning
   try {
     // Fetch more than needed so we can apply decay filtering client-side.
     // We fetch 3x the limit to account for entries that will be filtered out.
-    const candidates = typedAll<LearningRow>(db,
+    const candidates = typedAll<LearningRow>(
+      db,
       `SELECT id, insight, confidence, created_at, updated_at FROM brain_learnings
          WHERE CAST(confidence AS REAL) >= 0.3
          ORDER BY confidence DESC, created_at DESC
          LIMIT ?`,
-      limit * 3);
+      limit * 3,
+    );
 
     // Apply confidence decay based on age (T028).
     // Uses updated_at if available (referenced memories decay slower),
@@ -318,8 +322,7 @@ function queryHighConfidenceLearnings(db: DatabaseSync, limit: number): Learning
         const referenceDate = row.updated_at || row.created_at;
         const ageDays = Math.max(0, (now - new Date(referenceDate).getTime()) / MS_PER_DAY);
         const rawConfidence = parseFloat(row.confidence) || 0;
-        const effectiveConfidence =
-          rawConfidence * Math.pow(DECAY_RATE, ageDays / DECAY_HALF_LIFE_DAYS);
+        const effectiveConfidence = rawConfidence * DECAY_RATE ** (ageDays / DECAY_HALF_LIFE_DAYS);
         return { ...row, effectiveConfidence };
       })
       .filter((row) => row.effectiveConfidence >= DECAY_MIN_CONFIDENCE_THRESHOLD)
@@ -337,9 +340,12 @@ function queryHighConfidenceLearnings(db: DatabaseSync, limit: number): Learning
 
 function queryPatterns(db: DatabaseSync, type: string, limit: number): PatternRow[] {
   try {
-    return typedAll<PatternRow>(db,
+    return typedAll<PatternRow>(
+      db,
       'SELECT id, pattern, type, impact, extracted_at FROM brain_patterns WHERE type = ? ORDER BY extracted_at DESC LIMIT ?',
-      type, limit);
+      type,
+      limit,
+    );
   } catch {
     return [];
   }
@@ -347,7 +353,8 @@ function queryPatterns(db: DatabaseSync, type: string, limit: number): PatternRo
 
 function queryRecentObservations(db: DatabaseSync, limit: number): ObservationRow[] {
   try {
-    return typedAll<ObservationRow>(db,
+    return typedAll<ObservationRow>(
+      db,
       `SELECT id, title, type, created_at FROM brain_observations
          WHERE type != 'change'
            AND title NOT LIKE 'File changed:%'
@@ -355,7 +362,8 @@ function queryRecentObservations(db: DatabaseSync, limit: number): ObservationRo
            AND title NOT LIKE 'Task complete:%'
            AND title NOT LIKE '[hook]%'
          ORDER BY created_at DESC LIMIT ?`,
-      limit);
+      limit,
+    );
   } catch {
     return [];
   }

package/src/memory/pipeline-manifest-sqlite.ts

@@ -15,8 +15,8 @@ import { createHash } from 'node:crypto';
 import { existsSync, readFileSync, renameSync } from 'node:fs';
 import { join } from 'node:path';
 import { and, count, desc, eq, gte, isNull, like, lte, or, type SQL } from 'drizzle-orm';
-import { pipelineManifest } from '../store/tasks-schema.js';
 import type { EngineResult } from '../engine-result.js';
+import { pipelineManifest } from '../store/tasks-schema.js';
 
 async function getDb(cwd?: string): ReturnType<typeof import('../store/sqlite.js')['getDb']> {
   const { getDb: _getDb } = await import('../store/sqlite.js');
@@ -42,7 +42,7 @@ import {
 
 // Re-export types for consumers that previously imported them from pipeline-manifest-compat
 export type ManifestEntry = ExtendedManifestEntry;
-export type { ResearchFilter, ContradictionDetail, SupersededDetail };
+export type { ContradictionDetail, ResearchFilter, SupersededDetail };
 export { filterManifestEntries };
 
 interface PipelineManifestListParams extends ResearchFilter {

package/src/metrics/__tests__/model-provider-registry.test.d.ts

@@ -1,2 +1,2 @@
 export {};
-//# sourceMappingURL=model-provider-registry.test.d.ts.map
+//# sourceMappingURL=model-provider-registry.test.d.ts.map

package/src/metrics/__tests__/provider-detection.test.d.ts

@@ -1,2 +1,2 @@
 export {};
-//# sourceMappingURL=provider-detection.test.d.ts.map
+//# sourceMappingURL=provider-detection.test.d.ts.map

package/src/metrics/token-service.ts

@@ -14,8 +14,8 @@
 import { createHash, randomUUID } from 'node:crypto';
 import { existsSync, readdirSync, readFileSync } from 'node:fs';
 import { join } from 'node:path';
-import { type NewTokenUsageRow, type TokenUsageRow, tokenUsage } from '../store/tasks-schema.js';
 import { getCleoHome } from '../paths.js';
+import { type NewTokenUsageRow, type TokenUsageRow, tokenUsage } from '../store/tasks-schema.js';
 import { resolveProviderFromModelRegistry } from './model-provider-registry.js';
 import { detectRuntimeProviderContext } from './provider-detection.js';
 

package/src/migration/__tests__/checksum.test.d.ts

@@ -5,4 +5,4 @@
  * @epic T4454
  */
 export {};
-//# sourceMappingURL=checksum.test.d.ts.map
+//# sourceMappingURL=checksum.test.d.ts.map

package/src/migration/__tests__/logger.test.d.ts

@@ -2,4 +2,4 @@
  * Tests for migration logger (@task T4727)
  */
 export {};
-//# sourceMappingURL=logger.test.d.ts.map
+//# sourceMappingURL=logger.test.d.ts.map

package/src/migration/__tests__/migration-failure.integration.test.d.ts

@@ -12,4 +12,4 @@
  * @epic T4454
  */
 export {};
-//# sourceMappingURL=migration-failure.integration.test.d.ts.map
+//# sourceMappingURL=migration-failure.integration.test.d.ts.map

package/src/migration/__tests__/migration.test.d.ts

@@ -10,4 +10,4 @@
  * The pure-function tests (detectVersion, compareSemver) remain unchanged.
  */
 export {};
-//# sourceMappingURL=migration.test.d.ts.map
+//# sourceMappingURL=migration.test.d.ts.map

package/src/migration/__tests__/state.test.d.ts

@@ -5,4 +5,4 @@
  * @epic T4454
  */
 export {};
-//# sourceMappingURL=state.test.d.ts.map
+//# sourceMappingURL=state.test.d.ts.map

package/src/migration/__tests__/validate.test.d.ts

@@ -5,4 +5,4 @@
  * @epic T4454
  */
 export {};
-//# sourceMappingURL=validate.test.d.ts.map
+//# sourceMappingURL=validate.test.d.ts.map

package/src/migration/index.ts

@@ -71,10 +71,10 @@ export {
 } from './validate.js';
 
 import { join } from 'node:path';
-import { readJson, saveJson } from '../store/json.js';
 import { ExitCode } from '@cleocode/contracts';
 import { CleoError } from '../errors.js';
 import { getBackupDir, getCleoDirAbsolute, getConfigPath, getTaskPath } from '../paths.js';
+import { readJson, saveJson } from '../store/json.js';
 
 /** Schema version info. */
 export interface SchemaVersion {

package/src/nexus/__tests__/deps.test.d.ts

@@ -4,4 +4,4 @@
  * @epic T4540
  */
 export {};
-//# sourceMappingURL=deps.test.d.ts.map
+//# sourceMappingURL=deps.test.d.ts.map

package/src/nexus/__tests__/deps.test.js.map

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package/src/nexus/__tests__/deps.test.ts

@@ -7,6 +7,7 @@
 import { mkdir, mkdtemp, rm } from 'node:fs/promises';
 import { tmpdir } from 'node:os';
 import { join } from 'node:path';
+import type { Task } from '@cleocode/contracts';
 import { afterEach, beforeEach, describe, expect, it } from 'vitest';
 import { seedTasks } from '../../store/__tests__/test-db-helper.js';
 import { resetDbState } from '../../store/sqlite.js';
@@ -24,16 +25,7 @@ import { nexusRegister, resetNexusDbState } from '../registry.js';
 /** Create a test project with tasks in SQLite (tasks.db). */
 async function createTestProjectDb(
   dir: string,
-  tasks: Array<{
-    id: string;
-    title: string;
-    status: string;
-    description?: string;
-    labels?: string[];
-    depends?: string[];
-    priority?: string;
-    createdAt?: string;
-  }>,
+  tasks: Array<Partial<Task> & { id: string }>,
 ): Promise<void> {
   await mkdir(join(dir, '.cleo'), { recursive: true });
   resetDbState();

package/src/nexus/__tests__/permissions.test.d.ts

@@ -4,4 +4,4 @@
  * @epic T4540
  */
 export {};
-//# sourceMappingURL=permissions.test.d.ts.map
+//# sourceMappingURL=permissions.test.d.ts.map

package/src/nexus/__tests__/query.test.d.ts

@@ -4,4 +4,4 @@
  * @epic T4540
  */
 export {};
-//# sourceMappingURL=query.test.d.ts.map
+//# sourceMappingURL=query.test.d.ts.map

package/src/nexus/__tests__/reconcile.test.d.ts

@@ -4,4 +4,4 @@
  * @epic T4540
  */
 export {};
-//# sourceMappingURL=reconcile.test.d.ts.map
+//# sourceMappingURL=reconcile.test.d.ts.map

package/src/nexus/__tests__/reconcile.test.js

@@ -9,12 +9,12 @@ import { tmpdir } from 'node:os';
 import { join } from 'node:path';
 import { eq } from 'drizzle-orm';
 import { afterEach, beforeEach, describe, expect, it } from 'vitest';
+import { CleoError } from '../../errors.js';
 import { seedTasks } from '../../store/__tests__/test-db-helper.js';
 import { projectRegistry } from '../../store/nexus-schema.js';
 import { getNexusDb } from '../../store/nexus-sqlite.js';
 import { resetDbState } from '../../store/sqlite.js';
 import { createSqliteDataAccessor } from '../../store/sqlite-data-accessor.js';
-import { CleoError } from '../../errors.js';
 import { generateProjectHash } from '../hash.js';
 import { nexusGetProject, nexusInit, nexusReconcile, nexusRegister, resetNexusDbState, } from '../registry.js';
 /** Create a test project with tasks in SQLite (tasks.db) and project-info.json. */

package/src/nexus/__tests__/reconcile.test.js.map

@@ -1 +1 @@
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package/src/nexus/__tests__/reconcile.test.ts

@@ -10,12 +10,12 @@ import { tmpdir } from 'node:os';
 import { join } from 'node:path';
 import { eq } from 'drizzle-orm';
 import { afterEach, beforeEach, describe, expect, it } from 'vitest';
+import { CleoError } from '../../errors.js';
 import { seedTasks } from '../../store/__tests__/test-db-helper.js';
 import { projectRegistry } from '../../store/nexus-schema.js';
 import { getNexusDb } from '../../store/nexus-sqlite.js';
 import { resetDbState } from '../../store/sqlite.js';
 import { createSqliteDataAccessor } from '../../store/sqlite-data-accessor.js';
-import { CleoError } from '../../errors.js';
 import { generateProjectHash } from '../hash.js';
 import {
   nexusGetProject,

package/src/nexus/__tests__/registry.test.d.ts

@@ -4,4 +4,4 @@
  * @epic T4540
  */
 export {};
-//# sourceMappingURL=registry.test.d.ts.map
+//# sourceMappingURL=registry.test.d.ts.map