@cirrobio/api-client 0.4.3 → 0.9.1

package/dist/models/ResourcesInfo.js

@@ -18,7 +18,7 @@ exports.ResourcesInfoToJSON = exports.ResourcesInfoFromJSONTyped = exports.Resou
  * Check if a given object implements the ResourcesInfo interface.
  */
 function instanceOfResourcesInfo(value) {
-    var isInstance = true;
+    let isInstance = true;
     isInstance = isInstance && "commit" in value;
     isInstance = isInstance && "date" in value;
     isInstance = isInstance && "repository" in value;

package/dist/models/RunAnalysisRequest.d.ts

@@ -45,6 +45,14 @@ export interface RunAnalysisRequest {
      * @memberof RunAnalysisRequest
      */
     sourceSampleIds?: Array<string> | null;
+    /**
+     * Files containing samples used to define source data input to this workflow. If not specified, all files will be used. Keys are sampleIds, and the lists are file paths to include.
+     * @type {{ [key: string]: Array<string>; }}
+     * @memberof RunAnalysisRequest
+     */
+    sourceSampleFilesMap?: {
+        [key: string]: Array<string>;
+    } | null;
     /**
      * Used for caching task execution. If the parameters are the same as the dataset specified here, it will re-use the output to minimize duplicate work
      * @type {string}

package/dist/models/RunAnalysisRequest.js

@@ -14,12 +14,12 @@
  */
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.RunAnalysisRequestToJSON = exports.RunAnalysisRequestFromJSONTyped = exports.RunAnalysisRequestFromJSON = exports.instanceOfRunAnalysisRequest = void 0;
-var runtime_1 = require("../runtime");
+const runtime_1 = require("../runtime");
 /**
  * Check if a given object implements the RunAnalysisRequest interface.
  */
 function instanceOfRunAnalysisRequest(value) {
-    var isInstance = true;
+    let isInstance = true;
     isInstance = isInstance && "name" in value;
     isInstance = isInstance && "processId" in value;
     isInstance = isInstance && "sourceDatasetIds" in value;
@@ -42,6 +42,7 @@ function RunAnalysisRequestFromJSONTyped(json, ignoreDiscriminator) {
         'processId': json['processId'],
         'sourceDatasetIds': json['sourceDatasetIds'],
         'sourceSampleIds': !(0, runtime_1.exists)(json, 'sourceSampleIds') ? undefined : json['sourceSampleIds'],
+        'sourceSampleFilesMap': !(0, runtime_1.exists)(json, 'sourceSampleFilesMap') ? undefined : json['sourceSampleFilesMap'],
         'resumeDatasetId': !(0, runtime_1.exists)(json, 'resumeDatasetId') ? undefined : json['resumeDatasetId'],
         'params': json['params'],
         'notificationEmails': json['notificationEmails'],
@@ -62,6 +63,7 @@ function RunAnalysisRequestToJSON(value) {
         'processId': value.processId,
         'sourceDatasetIds': value.sourceDatasetIds,
         'sourceSampleIds': value.sourceSampleIds,
+        'sourceSampleFilesMap': value.sourceSampleFilesMap,
         'resumeDatasetId': value.resumeDatasetId,
         'params': value.params,
         'notificationEmails': value.notificationEmails,

package/dist/models/Sample.js

@@ -14,13 +14,13 @@
  */
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.SampleToJSON = exports.SampleFromJSONTyped = exports.SampleFromJSON = exports.instanceOfSample = void 0;
-var runtime_1 = require("../runtime");
-var DataFile_1 = require("./DataFile");
+const runtime_1 = require("../runtime");
+const DataFile_1 = require("./DataFile");
 /**
  * Check if a given object implements the Sample interface.
  */
 function instanceOfSample(value) {
-    var isInstance = true;
+    let isInstance = true;
     isInstance = isInstance && "id" in value;
     isInstance = isInstance && "name" in value;
     return isInstance;

package/dist/models/SampleRequest.js

@@ -18,7 +18,7 @@ exports.SampleRequestToJSON = exports.SampleRequestFromJSONTyped = exports.Sampl
  * Check if a given object implements the SampleRequest interface.
  */
 function instanceOfSampleRequest(value) {
-    var isInstance = true;
+    let isInstance = true;
     isInstance = isInstance && "name" in value;
     isInstance = isInstance && "metadata" in value;
     return isInstance;

package/dist/models/ServiceConnection.js

@@ -18,7 +18,7 @@ exports.ServiceConnectionToJSON = exports.ServiceConnectionFromJSONTyped = expor
  * Check if a given object implements the ServiceConnection interface.
  */
 function instanceOfServiceConnection(value) {
-    var isInstance = true;
+    let isInstance = true;
     isInstance = isInstance && "name" in value;
     isInstance = isInstance && "description" in value;
     return isInstance;

package/dist/models/SetUserProjectRoleRequest.js

@@ -14,13 +14,13 @@
  */
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.SetUserProjectRoleRequestToJSON = exports.SetUserProjectRoleRequestFromJSONTyped = exports.SetUserProjectRoleRequestFromJSON = exports.instanceOfSetUserProjectRoleRequest = void 0;
-var runtime_1 = require("../runtime");
-var ProjectRole_1 = require("./ProjectRole");
+const runtime_1 = require("../runtime");
+const ProjectRole_1 = require("./ProjectRole");
 /**
  * Check if a given object implements the SetUserProjectRoleRequest interface.
  */
 function instanceOfSetUserProjectRoleRequest(value) {
-    var isInstance = true;
+    let isInstance = true;
     isInstance = isInstance && "username" in value;
     isInstance = isInstance && "role" in value;
     return isInstance;

package/dist/models/SftpCredentials.js

@@ -18,7 +18,7 @@ exports.SftpCredentialsToJSON = exports.SftpCredentialsFromJSONTyped = exports.S
  * Check if a given object implements the SftpCredentials interface.
  */
 function instanceOfSftpCredentials(value) {
-    var isInstance = true;
+    let isInstance = true;
     isInstance = isInstance && "username" in value;
     isInstance = isInstance && "password" in value;
     isInstance = isInstance && "projectId" in value;

package/dist/models/Share.js

@@ -14,13 +14,13 @@
  */
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.ShareToJSON = exports.ShareFromJSONTyped = exports.ShareFromJSON = exports.instanceOfShare = void 0;
-var DatasetCondition_1 = require("./DatasetCondition");
-var ShareType_1 = require("./ShareType");
+const DatasetCondition_1 = require("./DatasetCondition");
+const ShareType_1 = require("./ShareType");
 /**
  * Check if a given object implements the Share interface.
  */
 function instanceOfShare(value) {
-    var isInstance = true;
+    let isInstance = true;
     isInstance = isInstance && "id" in value;
     isInstance = isInstance && "name" in value;
     isInstance = isInstance && "description" in value;

package/dist/models/ShareDetail.js

@@ -14,14 +14,14 @@
  */
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.ShareDetailToJSON = exports.ShareDetailFromJSONTyped = exports.ShareDetailFromJSON = exports.instanceOfShareDetail = void 0;
-var DatasetCondition_1 = require("./DatasetCondition");
-var NamedItem_1 = require("./NamedItem");
-var ShareType_1 = require("./ShareType");
+const DatasetCondition_1 = require("./DatasetCondition");
+const NamedItem_1 = require("./NamedItem");
+const ShareType_1 = require("./ShareType");
 /**
  * Check if a given object implements the ShareDetail interface.
  */
 function instanceOfShareDetail(value) {
-    var isInstance = true;
+    let isInstance = true;
     isInstance = isInstance && "id" in value;
     isInstance = isInstance && "name" in value;
     isInstance = isInstance && "description" in value;

package/dist/models/ShareInput.js

@@ -14,13 +14,13 @@
  */
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.ShareInputToJSON = exports.ShareInputFromJSONTyped = exports.ShareInputFromJSON = exports.instanceOfShareInput = void 0;
-var runtime_1 = require("../runtime");
-var DatasetCondition_1 = require("./DatasetCondition");
+const runtime_1 = require("../runtime");
+const DatasetCondition_1 = require("./DatasetCondition");
 /**
  * Check if a given object implements the ShareInput interface.
  */
 function instanceOfShareInput(value) {
-    var isInstance = true;
+    let isInstance = true;
     isInstance = isInstance && "name" in value;
     isInstance = isInstance && "description" in value;
     isInstance = isInstance && "classificationIds" in value;

package/dist/models/StopExecutionResponse.js

@@ -14,12 +14,12 @@
  */
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.StopExecutionResponseToJSON = exports.StopExecutionResponseFromJSONTyped = exports.StopExecutionResponseFromJSON = exports.instanceOfStopExecutionResponse = void 0;
-var runtime_1 = require("../runtime");
+const runtime_1 = require("../runtime");
 /**
  * Check if a given object implements the StopExecutionResponse interface.
  */
 function instanceOfStopExecutionResponse(value) {
-    var isInstance = true;
+    let isInstance = true;
     return isInstance;
 }
 exports.instanceOfStopExecutionResponse = instanceOfStopExecutionResponse;

package/dist/models/SystemInfoResponse.js

@@ -14,14 +14,14 @@
  */
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.SystemInfoResponseToJSON = exports.SystemInfoResponseFromJSONTyped = exports.SystemInfoResponseFromJSON = exports.instanceOfSystemInfoResponse = void 0;
-var AuthInfo_1 = require("./AuthInfo");
-var ResourcesInfo_1 = require("./ResourcesInfo");
-var TenantInfo_1 = require("./TenantInfo");
+const AuthInfo_1 = require("./AuthInfo");
+const ResourcesInfo_1 = require("./ResourcesInfo");
+const TenantInfo_1 = require("./TenantInfo");
 /**
  * Check if a given object implements the SystemInfoResponse interface.
  */
 function instanceOfSystemInfoResponse(value) {
-    var isInstance = true;
+    let isInstance = true;
     isInstance = isInstance && "resourcesBucket" in value;
     isInstance = isInstance && "referencesBucket" in value;
     isInstance = isInstance && "liveEndpoint" in value;

package/dist/models/Table.js

@@ -14,13 +14,13 @@
  */
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.TableToJSON = exports.TableFromJSONTyped = exports.TableFromJSON = exports.instanceOfTable = void 0;
-var runtime_1 = require("../runtime");
-var ColumnDefinition_1 = require("./ColumnDefinition");
+const runtime_1 = require("../runtime");
+const ColumnDefinition_1 = require("./ColumnDefinition");
 /**
  * Check if a given object implements the Table interface.
  */
 function instanceOfTable(value) {
-    var isInstance = true;
+    let isInstance = true;
     isInstance = isInstance && "desc" in value;
     return isInstance;
 }

package/dist/models/Tag.js

@@ -14,12 +14,12 @@
  */
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.TagToJSON = exports.TagFromJSONTyped = exports.TagFromJSON = exports.instanceOfTag = void 0;
-var runtime_1 = require("../runtime");
+const runtime_1 = require("../runtime");
 /**
  * Check if a given object implements the Tag interface.
  */
 function instanceOfTag(value) {
-    var isInstance = true;
+    let isInstance = true;
     isInstance = isInstance && "value" in value;
     return isInstance;
 }

package/dist/models/Task.js

@@ -14,12 +14,12 @@
  */
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.TaskToJSON = exports.TaskFromJSONTyped = exports.TaskFromJSON = exports.instanceOfTask = void 0;
-var runtime_1 = require("../runtime");
+const runtime_1 = require("../runtime");
 /**
  * Check if a given object implements the Task interface.
  */
 function instanceOfTask(value) {
-    var isInstance = true;
+    let isInstance = true;
     isInstance = isInstance && "name" in value;
     isInstance = isInstance && "nativeJobId" in value;
     isInstance = isInstance && "status" in value;

package/dist/models/TenantInfo.js

@@ -14,13 +14,13 @@
  */
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.TenantInfoToJSON = exports.TenantInfoFromJSONTyped = exports.TenantInfoFromJSON = exports.instanceOfTenantInfo = void 0;
-var FeatureFlags_1 = require("./FeatureFlags");
-var LoginProvider_1 = require("./LoginProvider");
+const FeatureFlags_1 = require("./FeatureFlags");
+const LoginProvider_1 = require("./LoginProvider");
 /**
  * Check if a given object implements the TenantInfo interface.
  */
 function instanceOfTenantInfo(value) {
-    var isInstance = true;
+    let isInstance = true;
     isInstance = isInstance && "id" in value;
     isInstance = isInstance && "name" in value;
     isInstance = isInstance && "description" in value;

package/dist/models/UpdateDatasetRequest.js

@@ -14,12 +14,12 @@
  */
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.UpdateDatasetRequestToJSON = exports.UpdateDatasetRequestFromJSONTyped = exports.UpdateDatasetRequestFromJSON = exports.instanceOfUpdateDatasetRequest = void 0;
-var Tag_1 = require("./Tag");
+const Tag_1 = require("./Tag");
 /**
  * Check if a given object implements the UpdateDatasetRequest interface.
  */
 function instanceOfUpdateDatasetRequest(value) {
-    var isInstance = true;
+    let isInstance = true;
     isInstance = isInstance && "name" in value;
     isInstance = isInstance && "description" in value;
     isInstance = isInstance && "processId" in value;

package/dist/models/UpdateUserRequest.js

@@ -14,13 +14,13 @@
  */
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.UpdateUserRequestToJSON = exports.UpdateUserRequestFromJSONTyped = exports.UpdateUserRequestFromJSON = exports.instanceOfUpdateUserRequest = void 0;
-var runtime_1 = require("../runtime");
-var UserSettings_1 = require("./UserSettings");
+const runtime_1 = require("../runtime");
+const UserSettings_1 = require("./UserSettings");
 /**
  * Check if a given object implements the UpdateUserRequest interface.
  */
 function instanceOfUpdateUserRequest(value) {
-    var isInstance = true;
+    let isInstance = true;
     isInstance = isInstance && "name" in value;
     isInstance = isInstance && "email" in value;
     return isInstance;

package/dist/models/UploadDatasetCreateResponse.js

@@ -18,7 +18,7 @@ exports.UploadDatasetCreateResponseToJSON = exports.UploadDatasetCreateResponseF
  * Check if a given object implements the UploadDatasetCreateResponse interface.
  */
 function instanceOfUploadDatasetCreateResponse(value) {
-    var isInstance = true;
+    let isInstance = true;
     isInstance = isInstance && "id" in value;
     isInstance = isInstance && "message" in value;
     isInstance = isInstance && "uploadPath" in value;

package/dist/models/UploadDatasetRequest.js

@@ -14,13 +14,13 @@
  */
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.UploadDatasetRequestToJSON = exports.UploadDatasetRequestFromJSONTyped = exports.UploadDatasetRequestFromJSON = exports.instanceOfUploadDatasetRequest = void 0;
-var runtime_1 = require("../runtime");
-var Tag_1 = require("./Tag");
+const runtime_1 = require("../runtime");
+const Tag_1 = require("./Tag");
 /**
  * Check if a given object implements the UploadDatasetRequest interface.
  */
 function instanceOfUploadDatasetRequest(value) {
-    var isInstance = true;
+    let isInstance = true;
     isInstance = isInstance && "name" in value;
     isInstance = isInstance && "processId" in value;
     isInstance = isInstance && "expectedFiles" in value;

package/dist/models/User.js

@@ -18,7 +18,7 @@ exports.UserToJSON = exports.UserFromJSONTyped = exports.UserFromJSON = exports.
  * Check if a given object implements the User interface.
  */
 function instanceOfUser(value) {
-    var isInstance = true;
+    let isInstance = true;
     isInstance = isInstance && "name" in value;
     isInstance = isInstance && "username" in value;
     isInstance = isInstance && "organization" in value;

package/dist/models/UserDetail.js

@@ -14,14 +14,14 @@
  */
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.UserDetailToJSON = exports.UserDetailFromJSONTyped = exports.UserDetailFromJSON = exports.instanceOfUserDetail = void 0;
-var runtime_1 = require("../runtime");
-var UserProjectAssignment_1 = require("./UserProjectAssignment");
-var UserSettings_1 = require("./UserSettings");
+const runtime_1 = require("../runtime");
+const UserProjectAssignment_1 = require("./UserProjectAssignment");
+const UserSettings_1 = require("./UserSettings");
 /**
  * Check if a given object implements the UserDetail interface.
  */
 function instanceOfUserDetail(value) {
-    var isInstance = true;
+    let isInstance = true;
     isInstance = isInstance && "username" in value;
     isInstance = isInstance && "name" in value;
     isInstance = isInstance && "phone" in value;

package/dist/models/UserProjectAssignment.js

@@ -14,13 +14,13 @@
  */
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.UserProjectAssignmentToJSON = exports.UserProjectAssignmentFromJSONTyped = exports.UserProjectAssignmentFromJSON = exports.instanceOfUserProjectAssignment = void 0;
-var runtime_1 = require("../runtime");
-var ProjectRole_1 = require("./ProjectRole");
+const runtime_1 = require("../runtime");
+const ProjectRole_1 = require("./ProjectRole");
 /**
  * Check if a given object implements the UserProjectAssignment interface.
  */
 function instanceOfUserProjectAssignment(value) {
-    var isInstance = true;
+    let isInstance = true;
     isInstance = isInstance && "projectId" in value;
     isInstance = isInstance && "role" in value;
     isInstance = isInstance && "createdBy" in value;

package/dist/models/UserSettings.js

@@ -12,24 +12,13 @@
  * https://openapi-generator.tech
  * Do not edit the class manually.
  */
-var __assign = (this && this.__assign) || function () {
-    __assign = Object.assign || function(t) {
-        for (var s, i = 1, n = arguments.length; i < n; i++) {
-            s = arguments[i];
-            for (var p in s) if (Object.prototype.hasOwnProperty.call(s, p))
-                t[p] = s[p];
-        }
-        return t;
-    };
-    return __assign.apply(this, arguments);
-};
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.UserSettingsToJSON = exports.UserSettingsFromJSONTyped = exports.UserSettingsFromJSON = exports.instanceOfUserSettings = void 0;
 /**
  * Check if a given object implements the UserSettings interface.
  */
 function instanceOfUserSettings(value) {
-    var isInstance = true;
+    let isInstance = true;
     isInstance = isInstance && "analysisUpdateNotificationsEnabled" in value;
     return isInstance;
 }
@@ -42,7 +31,7 @@ function UserSettingsFromJSONTyped(json, ignoreDiscriminator) {
     if ((json === undefined) || (json === null)) {
         return json;
     }
-    return __assign(__assign({}, json), { 'analysisUpdateNotificationsEnabled': json['analysisUpdateNotificationsEnabled'] });
+    return Object.assign(Object.assign({}, json), { 'analysisUpdateNotificationsEnabled': json['analysisUpdateNotificationsEnabled'] });
 }
 exports.UserSettingsFromJSONTyped = UserSettingsFromJSONTyped;
 function UserSettingsToJSON(value) {
@@ -52,6 +41,6 @@ function UserSettingsToJSON(value) {
     if (value === null) {
         return null;
     }
-    return __assign(__assign({}, value), { 'analysisUpdateNotificationsEnabled': value.analysisUpdateNotificationsEnabled });
+    return Object.assign(Object.assign({}, value), { 'analysisUpdateNotificationsEnabled': value.analysisUpdateNotificationsEnabled });
 }
 exports.UserSettingsToJSON = UserSettingsToJSON;

package/dist/models/ValidateFileRequirementsRequest.js

@@ -18,7 +18,7 @@ exports.ValidateFileRequirementsRequestToJSON = exports.ValidateFileRequirements
  * Check if a given object implements the ValidateFileRequirementsRequest interface.
  */
 function instanceOfValidateFileRequirementsRequest(value) {
-    var isInstance = true;
+    let isInstance = true;
     isInstance = isInstance && "fileNames" in value;
     isInstance = isInstance && "sampleSheet" in value;
     return isInstance;