@aws-sdk/client-omics 3.331.0 → 3.335.0

package/dist-types/models/models_0.d.ts

@@ -3,6 +3,28 @@ import { ExceptionOptionType as __ExceptionOptionType } from "@aws-sdk/smithy-cl
 import { DocumentType as __DocumentType } from "@aws-sdk/types";
 import { Readable } from "stream";
 import { OmicsServiceException as __BaseException } from "./OmicsServiceException";
+/**
+ * @public
+ */
+export interface AbortMultipartReadSetUploadRequest {
+    /**
+     * <p>
+     *       The sequence store ID for the store involved in the multipart upload.
+     *     </p>
+     */
+    sequenceStoreId: string | undefined;
+    /**
+     * <p>
+     *       The ID for the multipart upload.
+     *     </p>
+     */
+    uploadId: string | undefined;
+}
+/**
+ * @public
+ */
+export interface AbortMultipartReadSetUploadResponse {
+}
 /**
  * @public
  * <p>You do not have sufficient access to perform this action.</p>
@@ -15,6 +37,107 @@ export declare class AccessDeniedException extends __BaseException {
      */
     constructor(opts: __ExceptionOptionType<AccessDeniedException, __BaseException>);
 }
+/**
+ * @public
+ * <p>An unexpected error occurred. Try the request again.</p>
+ */
+export declare class InternalServerException extends __BaseException {
+    readonly name: "InternalServerException";
+    readonly $fault: "server";
+    $retryable: {};
+    /**
+     * @internal
+     */
+    constructor(opts: __ExceptionOptionType<InternalServerException, __BaseException>);
+}
+/**
+ * @public
+ * <p>
+ *       The operation is not supported by Amazon Omics, or the API does not exist.
+ *     </p>
+ */
+export declare class NotSupportedOperationException extends __BaseException {
+    readonly name: "NotSupportedOperationException";
+    readonly $fault: "client";
+    /**
+     * @internal
+     */
+    constructor(opts: __ExceptionOptionType<NotSupportedOperationException, __BaseException>);
+}
+/**
+ * @public
+ * <p>The request timed out.</p>
+ */
+export declare class RequestTimeoutException extends __BaseException {
+    readonly name: "RequestTimeoutException";
+    readonly $fault: "client";
+    /**
+     * @internal
+     */
+    constructor(opts: __ExceptionOptionType<RequestTimeoutException, __BaseException>);
+}
+/**
+ * @public
+ * <p>The target resource was not found in the current Region.</p>
+ */
+export declare class ResourceNotFoundException extends __BaseException {
+    readonly name: "ResourceNotFoundException";
+    readonly $fault: "client";
+    /**
+     * @internal
+     */
+    constructor(opts: __ExceptionOptionType<ResourceNotFoundException, __BaseException>);
+}
+/**
+ * @public
+ * <p>The request exceeds a service quota.</p>
+ */
+export declare class ServiceQuotaExceededException extends __BaseException {
+    readonly name: "ServiceQuotaExceededException";
+    readonly $fault: "client";
+    /**
+     * @internal
+     */
+    constructor(opts: __ExceptionOptionType<ServiceQuotaExceededException, __BaseException>);
+}
+/**
+ * @public
+ * <p>The request was denied due to request throttling.</p>
+ */
+export declare class ThrottlingException extends __BaseException {
+    readonly name: "ThrottlingException";
+    readonly $fault: "client";
+    $retryable: {
+        throttling: boolean;
+    };
+    /**
+     * @internal
+     */
+    constructor(opts: __ExceptionOptionType<ThrottlingException, __BaseException>);
+}
+/**
+ * @public
+ * <p>The input fails to satisfy the constraints specified by an AWS service.</p>
+ */
+export declare class ValidationException extends __BaseException {
+    readonly name: "ValidationException";
+    readonly $fault: "client";
+    /**
+     * @internal
+     */
+    constructor(opts: __ExceptionOptionType<ValidationException, __BaseException>);
+}
+/**
+ * @public
+ * @enum
+ */
+export declare const Accelerators: {
+    readonly GPU: "GPU";
+};
+/**
+ * @public
+ */
+export type Accelerators = (typeof Accelerators)[keyof typeof Accelerators];
 /**
  * @public
  * @enum
@@ -180,58 +303,6 @@ export interface CancelAnnotationImportRequest {
  */
 export interface CancelAnnotationImportResponse {
 }
-/**
- * @public
- * <p>An unexpected error occurred. Try the request again.</p>
- */
-export declare class InternalServerException extends __BaseException {
-    readonly name: "InternalServerException";
-    readonly $fault: "server";
-    $retryable: {};
-    /**
-     * @internal
-     */
-    constructor(opts: __ExceptionOptionType<InternalServerException, __BaseException>);
-}
-/**
- * @public
- * <p>The target resource was not found in the current Region.</p>
- */
-export declare class ResourceNotFoundException extends __BaseException {
-    readonly name: "ResourceNotFoundException";
-    readonly $fault: "client";
-    /**
-     * @internal
-     */
-    constructor(opts: __ExceptionOptionType<ResourceNotFoundException, __BaseException>);
-}
-/**
- * @public
- * <p>The request was denied due to request throttling.</p>
- */
-export declare class ThrottlingException extends __BaseException {
-    readonly name: "ThrottlingException";
-    readonly $fault: "client";
-    $retryable: {
-        throttling: boolean;
-    };
-    /**
-     * @internal
-     */
-    constructor(opts: __ExceptionOptionType<ThrottlingException, __BaseException>);
-}
-/**
- * @public
- * <p>The input fails to satisfy the constraints specified by an AWS service.</p>
- */
-export declare class ValidationException extends __BaseException {
-    readonly name: "ValidationException";
-    readonly $fault: "client";
-    /**
-     * @internal
-     */
-    constructor(opts: __ExceptionOptionType<ValidationException, __BaseException>);
-}
 /**
  * @public
  */
@@ -392,6 +463,12 @@ export interface GetAnnotationImportResponse {
      * <p>Formatting options for a file.</p>
      */
     formatOptions: FormatOptions | undefined;
+    /**
+     * <p>
+     *       The annotation schema generated by the parsed annotation data.
+     *     </p>
+     */
+    annotationFields?: Record<string, string>;
 }
 /**
  * @public
@@ -465,6 +542,12 @@ export interface AnnotationImportJobItem {
      * <p>The job's left normalization setting.</p>
      */
     runLeftNormalization?: boolean;
+    /**
+     * <p>
+     *       The annotation schema generated by the parsed annotation data.
+     *     </p>
+     */
+    annotationFields?: Record<string, string>;
 }
 /**
  * @public
@@ -479,18 +562,6 @@ export interface ListAnnotationImportJobsResponse {
      */
     nextToken?: string;
 }
-/**
- * @public
- * <p>The request exceeds a service quota.</p>
- */
-export declare class ServiceQuotaExceededException extends __BaseException {
-    readonly name: "ServiceQuotaExceededException";
-    readonly $fault: "client";
-    /**
-     * @internal
-     */
-    constructor(opts: __ExceptionOptionType<ServiceQuotaExceededException, __BaseException>);
-}
 /**
  * @public
  */
@@ -515,6 +586,12 @@ export interface StartAnnotationImportRequest {
      * <p>The job's left normalization setting.</p>
      */
     runLeftNormalization?: boolean;
+    /**
+     * <p>
+     *       The annotation schema generated by the parsed annotation data.
+     *     </p>
+     */
+    annotationFields?: Record<string, string>;
 }
 /**
  * @public
@@ -1104,61 +1181,270 @@ export interface BatchDeleteReadSetRequest {
  */
 export interface ReadSetBatchError {
     /**
-     * <p>The error's ID.</p>
+     * <p>The error's ID.</p>
+     */
+    id: string | undefined;
+    /**
+     * <p>The error's code.</p>
+     */
+    code: string | undefined;
+    /**
+     * <p>The error's message.</p>
+     */
+    message: string | undefined;
+}
+/**
+ * @public
+ */
+export interface BatchDeleteReadSetResponse {
+    /**
+     * <p>Errors returned by individual delete operations.</p>
+     */
+    errors?: ReadSetBatchError[];
+}
+/**
+ * @public
+ */
+export interface CancelRunRequest {
+    /**
+     * <p>The run's ID.</p>
+     */
+    id: string | undefined;
+}
+/**
+ * @public
+ */
+export interface CancelVariantImportRequest {
+    /**
+     * <p>The job's ID.</p>
+     */
+    jobId: string | undefined;
+}
+/**
+ * @public
+ */
+export interface CancelVariantImportResponse {
+}
+/**
+ * @public
+ * @enum
+ */
+export declare const ReadSetPartSource: {
+    readonly SOURCE1: "SOURCE1";
+    readonly SOURCE2: "SOURCE2";
+};
+/**
+ * @public
+ */
+export type ReadSetPartSource = (typeof ReadSetPartSource)[keyof typeof ReadSetPartSource];
+/**
+ * @public
+ * <p>
+ *       Part of the response to the CompleteReadSetUpload API, including metadata.
+ *     </p>
+ */
+export interface CompleteReadSetUploadPartListItem {
+    /**
+     * <p>
+     *       A number identifying the part in a read set upload.
+     *     </p>
+     */
+    partNumber: number | undefined;
+    /**
+     * <p>
+     *       The source file of the part being uploaded.
+     *     </p>
+     */
+    partSource: ReadSetPartSource | string | undefined;
+    /**
+     * <p>
+     *       A unique identifier used to confirm that parts are being added to the correct upload.
+     *     </p>
+     */
+    checksum: string | undefined;
+}
+/**
+ * @public
+ */
+export interface CompleteMultipartReadSetUploadRequest {
+    /**
+     * <p>
+     *       The sequence store ID for the store involved in the multipart upload.
+     *     </p>
+     */
+    sequenceStoreId: string | undefined;
+    /**
+     * <p>
+     *       The ID for the multipart upload.
+     *     </p>
+     */
+    uploadId: string | undefined;
+    /**
+     * <p>
+     *       The individual uploads or parts of a multipart upload.
+     *     </p>
+     */
+    parts: CompleteReadSetUploadPartListItem[] | undefined;
+}
+/**
+ * @public
+ */
+export interface CompleteMultipartReadSetUploadResponse {
+    /**
+     * <p>
+     *       The read set ID created for an uploaded read set.
+     *     </p>
+     */
+    readSetId: string | undefined;
+}
+/**
+ * @public
+ * @enum
+ */
+export declare const FileType: {
+    readonly BAM: "BAM";
+    readonly CRAM: "CRAM";
+    readonly FASTQ: "FASTQ";
+};
+/**
+ * @public
+ */
+export type FileType = (typeof FileType)[keyof typeof FileType];
+/**
+ * @public
+ */
+export interface CreateMultipartReadSetUploadRequest {
+    /**
+     * <p>
+     *       The sequence store ID for the store that is the destination of the multipart uploads.
+     *     </p>
+     */
+    sequenceStoreId: string | undefined;
+    /**
+     * <p>
+     *       An idempotency token that can be used to avoid triggering multiple multipart uploads.
+     *     </p>
+     */
+    clientToken?: string;
+    /**
+     * <p>
+     *       The type of file being uploaded.
+     *     </p>
+     */
+    sourceFileType: FileType | string | undefined;
+    /**
+     * <p>
+     *       The source's subject ID.
+     *     </p>
+     */
+    subjectId: string | undefined;
+    /**
+     * <p>
+     *       The source's sample ID.
+     *     </p>
+     */
+    sampleId: string | undefined;
+    /**
+     * <p>
+     *       Where the source originated.
+     *     </p>
+     */
+    generatedFrom?: string;
+    /**
+     * <p>
+     *       The ARN of the reference.
+     *     </p>
+     */
+    referenceArn: string | undefined;
+    /**
+     * <p>
+     *       The name of the read set.
+     *     </p>
+     */
+    name: string | undefined;
+    /**
+     * <p>
+     *       The description of the read set.
+     *     </p>
+     */
+    description?: string;
+    /**
+     * <p>
+     *       Any tags to add to the read set.
+     *     </p>
+     */
+    tags?: Record<string, string>;
+}
+/**
+ * @public
+ */
+export interface CreateMultipartReadSetUploadResponse {
+    /**
+     * <p>
+     *       The sequence store ID for the store that the read set will be created in.
+     *     </p>
+     */
+    sequenceStoreId: string | undefined;
+    /**
+     * <p>
+     *       he ID for the initiated multipart upload.
+     *     </p>
+     */
+    uploadId: string | undefined;
+    /**
+     * <p>
+     *       The file type of the read set source.
+     *     </p>
+     */
+    sourceFileType: FileType | string | undefined;
+    /**
+     * <p>
+     *       The source's subject ID.
+     *     </p>
+     */
+    subjectId: string | undefined;
+    /**
+     * <p>
+     *       The source's sample ID.
+     *     </p>
      */
-    id: string | undefined;
+    sampleId: string | undefined;
     /**
-     * <p>The error's code.</p>
+     * <p>
+     *       The source of the read set.
+     *     </p>
      */
-    code: string | undefined;
+    generatedFrom?: string;
     /**
-     * <p>The error's message.</p>
+     * <p>
+     *       The read set source's reference ARN.
+     *     </p>
      */
-    message: string | undefined;
-}
-/**
- * @public
- */
-export interface BatchDeleteReadSetResponse {
+    referenceArn: string | undefined;
     /**
-     * <p>Errors returned by individual delete operations.</p>
+     * <p>
+     *       The name of the read set.
+     *     </p>
      */
-    errors?: ReadSetBatchError[];
-}
-/**
- * @public
- * <p>The request timed out.</p>
- */
-export declare class RequestTimeoutException extends __BaseException {
-    readonly name: "RequestTimeoutException";
-    readonly $fault: "client";
+    name?: string;
     /**
-     * @internal
+     * <p>
+     *       The description of the read set.
+     *     </p>
      */
-    constructor(opts: __ExceptionOptionType<RequestTimeoutException, __BaseException>);
-}
-/**
- * @public
- */
-export interface CancelRunRequest {
+    description?: string;
     /**
-     * <p>The run's ID.</p>
+     * <p>
+     *       The tags to add to the read set.
+     *     </p>
      */
-    id: string | undefined;
-}
-/**
- * @public
- */
-export interface CancelVariantImportRequest {
+    tags?: Record<string, string>;
     /**
-     * <p>The job's ID.</p>
+     * <p>
+     *       The creation time of the multipart upload.
+     *     </p>
      */
-    jobId: string | undefined;
-}
-/**
- * @public
- */
-export interface CancelVariantImportResponse {
+    creationTime: Date | undefined;
 }
 /**
  * @public
@@ -1242,6 +1528,12 @@ export interface CreateRunGroupRequest {
      * <p>To ensure that requests don't run multiple times, specify a unique ID for each request.</p>
      */
     requestId?: string;
+    /**
+     * <p>
+     *       The maximum GPUs that can be used by a run group.
+     *     </p>
+     */
+    maxGpus?: number;
 }
 /**
  * @public
@@ -1284,6 +1576,12 @@ export interface CreateSequenceStoreRequest {
      * <p>To ensure that requests don't run multiple times, specify a unique token for each request.</p>
      */
     clientToken?: string;
+    /**
+     * <p>
+     *       An S3 location that is used to store files that have failed a direct upload.
+     *     </p>
+     */
+    fallbackLocation?: string;
 }
 /**
  * @public
@@ -1313,6 +1611,12 @@ export interface CreateSequenceStoreResponse {
      * <p>When the store was created.</p>
      */
     creationTime: Date | undefined;
+    /**
+     * <p>
+     *       An S3 location that is used to store files that have failed a direct upload.
+     *     </p>
+     */
+    fallbackLocation?: string;
 }
 /**
  * @public
@@ -1434,6 +1738,12 @@ export interface CreateWorkflowRequest {
      * <p>To ensure that requests don't run multiple times, specify a unique ID for each request.</p>
      */
     requestId?: string;
+    /**
+     * <p>
+     *       The computational accelerator specified to run the workflow.
+     *     </p>
+     */
+    accelerators?: Accelerators | string;
 }
 /**
  * @public
@@ -1444,6 +1754,7 @@ export declare const WorkflowStatus: {
     readonly CREATING: "CREATING";
     readonly DELETED: "DELETED";
     readonly FAILED: "FAILED";
+    readonly INACTIVE: "INACTIVE";
     readonly UPDATING: "UPDATING";
 };
 /**
@@ -1691,19 +2002,6 @@ export interface FileInformation {
      */
     contentLength?: number;
 }
-/**
- * @public
- * @enum
- */
-export declare const FileType: {
-    readonly BAM: "BAM";
-    readonly CRAM: "CRAM";
-    readonly FASTQ: "FASTQ";
-};
-/**
- * @public
- */
-export type FileType = (typeof FileType)[keyof typeof FileType];
 /**
  * @public
  * @enum
@@ -2064,6 +2362,8 @@ export declare const ReadSetStatus: {
     readonly ARCHIVED: "ARCHIVED";
     readonly DELETED: "DELETED";
     readonly DELETING: "DELETING";
+    readonly PROCESSING_UPLOAD: "PROCESSING_UPLOAD";
+    readonly UPLOAD_FAILED: "UPLOAD_FAILED";
 };
 /**
  * @public
@@ -2125,6 +2425,12 @@ export interface GetReadSetMetadataResponse {
      * <p>The read set's files.</p>
      */
     files?: ReadSetFiles;
+    /**
+     * <p>
+     *       The status message for a read set. It provides more detail as to why the read set has a status.
+     *     </p>
+     */
+    statusMessage?: string;
 }
 /**
  * @public
@@ -2468,6 +2774,7 @@ export type RunStatus = (typeof RunStatus)[keyof typeof RunStatus];
  */
 export declare const WorkflowType: {
     readonly PRIVATE: "PRIVATE";
+    readonly READY2RUN: "READY2RUN";
 };
 /**
  * @public
@@ -2569,6 +2876,12 @@ export interface GetRunResponse {
      * <p>The run's tags.</p>
      */
     tags?: Record<string, string>;
+    /**
+     * <p>
+     *       The computational accelerator used to run the workflow.
+     *     </p>
+     */
+    accelerators?: Accelerators | string;
 }
 /**
  * @public
@@ -2615,6 +2928,12 @@ export interface GetRunGroupResponse {
      * <p>The group's tags.</p>
      */
     tags?: Record<string, string>;
+    /**
+     * <p>
+     *       The maximum GPUs that can be used by a run group.
+     *     </p>
+     */
+    maxGpus?: number;
 }
 /**
  * @public
@@ -2690,6 +3009,12 @@ export interface GetRunTaskResponse {
      * <p>The task's log stream.</p>
      */
     logStream?: string;
+    /**
+     * <p>
+     *       The number of Graphics Processing Units (GPU) specified in the task.
+     *     </p>
+     */
+    gpus?: number;
 }
 /**
  * @public
@@ -2728,6 +3053,12 @@ export interface GetSequenceStoreResponse {
      * <p>When the store was created.</p>
      */
     creationTime: Date | undefined;
+    /**
+     * <p>
+     *       An S3 location that is used to store files that have failed a direct upload.
+     *     </p>
+     */
+    fallbackLocation?: string;
 }
 /**
  * @public
@@ -2800,6 +3131,12 @@ export interface GetVariantImportResponse {
      * <p>The job's left normalization setting.</p>
      */
     runLeftNormalization: boolean | undefined;
+    /**
+     * <p>
+     *       The annotation schema generated by the parsed annotation data.
+     *     </p>
+     */
+    annotationFields?: Record<string, string>;
 }
 /**
  * @public
@@ -2955,6 +3292,17 @@ export interface GetWorkflowResponse {
      * <p>The workflow's tags.</p>
      */
     tags?: Record<string, string>;
+    /**
+     * <p>
+     *       Gets metadata for workflow.
+     *     </p>
+     */
+    metadata?: Record<string, string>;
+    /**
+     * <p>
+     *       The computational accelerator specified to run the workflow. </p>
+     */
+    accelerators?: Accelerators | string;
 }
 /**
  * @public
@@ -3052,6 +3400,120 @@ export interface ImportReferenceJobItem {
      */
     completionTime?: Date;
 }
+/**
+ * @public
+ */
+export interface ListMultipartReadSetUploadsRequest {
+    /**
+     * <p>
+     *       The Sequence Store ID used for the multipart uploads.
+     *     </p>
+     */
+    sequenceStoreId: string | undefined;
+    /**
+     * <p>
+     *       The maximum number of multipart uploads returned in a page.
+     *     </p>
+     */
+    maxResults?: number;
+    /**
+     * <p>
+     *       Next token returned in the response of a previous ListMultipartReadSetUploads call. Used to get the next page of results.
+     *     </p>
+     */
+    nextToken?: string;
+}
+/**
+ * @public
+ * <p>
+ *       Part of the response to ListMultipartReadSetUploads, excluding completed and aborted multipart uploads.
+ *     </p>
+ */
+export interface MultipartReadSetUploadListItem {
+    /**
+     * <p>
+     *       The sequence store ID used for the multipart upload.
+     *     </p>
+     */
+    sequenceStoreId: string | undefined;
+    /**
+     * <p>
+     *       The ID for the initiated multipart upload.
+     *     </p>
+     */
+    uploadId: string | undefined;
+    /**
+     * <p>
+     *       The type of file the read set originated from.
+     *     </p>
+     */
+    sourceFileType: FileType | string | undefined;
+    /**
+     * <p>
+     *       The read set source's subject ID.
+     *     </p>
+     */
+    subjectId: string | undefined;
+    /**
+     * <p>
+     *       The read set source's sample ID.
+     *     </p>
+     */
+    sampleId: string | undefined;
+    /**
+     * <p>
+     *       The source of an uploaded part.
+     *     </p>
+     */
+    generatedFrom: string | undefined;
+    /**
+     * <p>
+     *       The source's reference ARN.
+     *     </p>
+     */
+    referenceArn: string | undefined;
+    /**
+     * <p>
+     *       The name of a read set.
+     *     </p>
+     */
+    name?: string;
+    /**
+     * <p>
+     *       The description of a read set.
+     *     </p>
+     */
+    description?: string;
+    /**
+     * <p>
+     *       Any tags you wish to add to a read set.
+     *     </p>
+     */
+    tags?: Record<string, string>;
+    /**
+     * <p>
+     *       The time stamp for when a direct upload was created.
+     *     </p>
+     */
+    creationTime: Date | undefined;
+}
+/**
+ * @public
+ */
+export interface ListMultipartReadSetUploadsResponse {
+    /**
+     * <p>
+     *       Next token returned in the response of a previous ListMultipartReadSetUploads call. Used to get the next page of results.
+     *     </p>
+     */
+    nextToken?: string;
+    /**
+     * <p>
+     *       An array of multipart uploads.
+     *     </p>
+     */
+    uploads?: MultipartReadSetUploadListItem[];
+}
 /**
  * @public
  */
@@ -3179,6 +3641,24 @@ export interface ReadSetFilter {
      * <p>The filter's end date.</p>
      */
     createdBefore?: Date;
+    /**
+     * <p>
+     *       The read set source's sample ID.
+     *     </p>
+     */
+    sampleId?: string;
+    /**
+     * <p>
+     *       The read set source's subject ID.
+     *     </p>
+     */
+    subjectId?: string;
+    /**
+     * <p>
+     *       Where the source originated.
+     *     </p>
+     */
+    generatedFrom?: string;
 }
 /**
  * @public
@@ -3254,6 +3734,12 @@ export interface ReadSetListItem {
      * <p>When the read set was created.</p>
      */
     creationTime: Date | undefined;
+    /**
+     * <p>
+     *       The status for a read set. It provides more detail as to why the read set has a status.
+     *     </p>
+     */
+    statusMessage?: string;
 }
 /**
  * @public
@@ -3268,6 +3754,128 @@ export interface ListReadSetsResponse {
      */
     readSets: ReadSetListItem[] | undefined;
 }
+/**
+ * @public
+ * <p>
+ *       Filter settings that select for read set upload parts of interest.
+ *     </p>
+ */
+export interface ReadSetUploadPartListFilter {
+    /**
+     * <p>
+     *       Filters for read set uploads after a specified time.
+     *     </p>
+     */
+    createdAfter?: Date;
+    /**
+     * <p>
+     *       Filters for read set part uploads before a specified time.
+     *     </p>
+     */
+    createdBefore?: Date;
+}
+/**
+ * @public
+ */
+export interface ListReadSetUploadPartsRequest {
+    /**
+     * <p>
+     *       The Sequence Store ID used for the multipart uploads.
+     *     </p>
+     */
+    sequenceStoreId: string | undefined;
+    /**
+     * <p>
+     *       The ID for the initiated multipart upload.
+     *     </p>
+     */
+    uploadId: string | undefined;
+    /**
+     * <p>
+     *       The source file for the upload part.
+     *     </p>
+     */
+    partSource: ReadSetPartSource | string | undefined;
+    /**
+     * <p>
+     *       The maximum number of read set upload parts returned in a page.
+     *     </p>
+     */
+    maxResults?: number;
+    /**
+     * <p>
+     *       Next token returned in the response of a previous ListReadSetUploadPartsRequest call. Used to get the next page of results.
+     *     </p>
+     */
+    nextToken?: string;
+    /**
+     * <p>
+     *       Attributes used to filter for a specific subset of read set part uploads.
+     *     </p>
+     */
+    filter?: ReadSetUploadPartListFilter;
+}
+/**
+ * @public
+ * <p>
+ *       The metadata of a single part of a file that was added to a multipart upload. A list of these parts is returned in the response to the ListReadSetUploadParts API.
+ *     </p>
+ */
+export interface ReadSetUploadPartListItem {
+    /**
+     * <p>
+     *       The number identifying the part in an upload.
+     *     </p>
+     */
+    partNumber: number | undefined;
+    /**
+     * <p>
+     *       The size of the the part in an upload.
+     *     </p>
+     */
+    partSize: number | undefined;
+    /**
+     * <p>
+     *       The origin of the part being direct uploaded.
+     *     </p>
+     */
+    partSource: ReadSetPartSource | string | undefined;
+    /**
+     * <p>
+     *       A unique identifier used to confirm that parts are being added to the correct upload.
+     *     </p>
+     */
+    checksum: string | undefined;
+    /**
+     * <p>
+     *       The time stamp for when a direct upload was created.
+     *     </p>
+     */
+    creationTime?: Date;
+    /**
+     * <p>
+     *       The time stamp for the most recent update to an uploaded part.
+     *     </p>
+     */
+    lastUpdatedTime?: Date;
+}
+/**
+ * @public
+ */
+export interface ListReadSetUploadPartsResponse {
+    /**
+     * <p>
+     *       Next token returned in the response of a previous ListReadSetUploadParts call. Used to get the next page of results.
+     *     </p>
+     */
+    nextToken?: string;
+    /**
+     * <p>
+     *       An array of upload parts.
+     *     </p>
+     */
+    parts?: ReadSetUploadPartListItem[];
+}
 /**
  * @public
  */
@@ -3528,6 +4136,12 @@ export interface RunGroupListItem {
      * <p>When the group was created.</p>
      */
     creationTime?: Date;
+    /**
+     * <p>
+     *       The maximum GPUs that can be used by a run group.
+     *     </p>
+     */
+    maxGpus?: number;
 }
 /**
  * @public
@@ -3562,6 +4176,12 @@ export interface ListRunsRequest {
      * <p>The maximum number of runs to return in one page of results.</p>
      */
     maxResults?: number;
+    /**
+     * <p>
+     *       The status of a run.
+     *     </p>
+     */
+    status?: RunStatus | string;
 }
 /**
  * @public
@@ -3680,6 +4300,12 @@ export interface TaskListItem {
      * <p>When the task stopped.</p>
      */
     stopTime?: Date;
+    /**
+     * <p>
+     *       The number of Graphics Processing Units (GPU) specified for the task.
+     *     </p>
+     */
+    gpus?: number;
 }
 /**
  * @public
@@ -3758,6 +4384,12 @@ export interface SequenceStoreDetail {
      * <p>When the store was created.</p>
      */
     creationTime: Date | undefined;
+    /**
+     * <p>
+     *       An S3 location that is used to store files that have failed a direct upload.
+     *     </p>
+     */
+    fallbackLocation?: string;
 }
 /**
  * @public
@@ -3862,6 +4494,12 @@ export interface VariantImportJobItem {
      * <p>The job's left normalization setting.</p>
      */
     runLeftNormalization?: boolean;
+    /**
+     * <p>
+     *       The annotation schema generated by the parsed annotation data.
+     *     </p>
+     */
+    annotationFields?: Record<string, string>;
 }
 /**
  * @public
@@ -4024,6 +4662,12 @@ export interface WorkflowListItem {
      * <p>When the workflow was created.</p>
      */
     creationTime?: Date;
+    /**
+     * <p>
+     *       Any metadata available for workflow. The information listed may vary depending on the workflow, and there may also be no metadata to return.
+     *     </p>
+     */
+    metadata?: Record<string, string>;
 }
 /**
  * @public
@@ -4130,6 +4774,12 @@ export interface UpdateRunGroupRequest {
      * <p>A maximum run time for the group in minutes.</p>
      */
     maxDuration?: number;
+    /**
+     * <p>
+     *       The maximum GPUs that can be used by a run group.
+     *     </p>
+     */
+    maxGpus?: number;
 }
 /**
  * @public
@@ -4395,6 +5045,52 @@ export interface StartReadSetImportJobResponse {
      */
     creationTime: Date | undefined;
 }
+/**
+ * @public
+ */
+export interface UploadReadSetPartRequest {
+    /**
+     * <p>
+     *       The Sequence Store ID used for the multipart upload.
+     *     </p>
+     */
+    sequenceStoreId: string | undefined;
+    /**
+     * <p>
+     *       The ID for the initiated multipart upload.
+     *     </p>
+     */
+    uploadId: string | undefined;
+    /**
+     * <p>
+     *       The source file for an upload part.
+     *     </p>
+     */
+    partSource: ReadSetPartSource | string | undefined;
+    /**
+     * <p>
+     *       The number of the part being uploaded.
+     *     </p>
+     */
+    partNumber: number | undefined;
+    /**
+     * <p>
+     *       The read set data to upload for a part.
+     *     </p>
+     */
+    payload: Readable | ReadableStream | Blob | undefined;
+}
+/**
+ * @public
+ */
+export interface UploadReadSetPartResponse {
+    /**
+     * <p>
+     *       An identifier used to confirm that parts are being added to the intended upload.
+     *     </p>
+     */
+    checksum: string | undefined;
+}
 /**
  * @public
  */
@@ -4461,6 +5157,12 @@ export interface StartVariantImportRequest {
      * <p>The job's left normalization setting.</p>
      */
     runLeftNormalization?: boolean;
+    /**
+     * <p>
+     *       The annotation schema generated by the parsed annotation data.
+     *     </p>
+     */
+    annotationFields?: Record<string, string>;
 }
 /**
  * @public
@@ -4542,3 +5244,7 @@ export declare const GetReadSetResponseFilterSensitiveLog: (obj: GetReadSetRespo
  * @internal
  */
 export declare const GetReferenceResponseFilterSensitiveLog: (obj: GetReferenceResponse) => any;
+/**
+ * @internal
+ */
+export declare const UploadReadSetPartRequestFilterSensitiveLog: (obj: UploadReadSetPartRequest) => any;