@aws-sdk/client-omics 3.331.0 → 3.335.0

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Files changed (88) hide show
  1. package/README.md +56 -8
  2. package/dist-cjs/Omics.js +12 -0
  3. package/dist-cjs/commands/AbortMultipartReadSetUploadCommand.js +45 -0
  4. package/dist-cjs/commands/CompleteMultipartReadSetUploadCommand.js +45 -0
  5. package/dist-cjs/commands/CreateMultipartReadSetUploadCommand.js +45 -0
  6. package/dist-cjs/commands/ListMultipartReadSetUploadsCommand.js +45 -0
  7. package/dist-cjs/commands/ListReadSetUploadPartsCommand.js +45 -0
  8. package/dist-cjs/commands/UploadReadSetPartCommand.js +46 -0
  9. package/dist-cjs/commands/index.js +6 -0
  10. package/dist-cjs/models/models_0.js +83 -55
  11. package/dist-cjs/pagination/ListMultipartReadSetUploadsPaginator.js +29 -0
  12. package/dist-cjs/pagination/ListReadSetUploadPartsPaginator.js +29 -0
  13. package/dist-cjs/pagination/index.js +2 -0
  14. package/dist-cjs/protocols/Aws_restJson1.js +626 -4
  15. package/dist-es/Omics.js +12 -0
  16. package/dist-es/commands/AbortMultipartReadSetUploadCommand.js +41 -0
  17. package/dist-es/commands/CompleteMultipartReadSetUploadCommand.js +41 -0
  18. package/dist-es/commands/CreateMultipartReadSetUploadCommand.js +41 -0
  19. package/dist-es/commands/ListMultipartReadSetUploadsCommand.js +41 -0
  20. package/dist-es/commands/ListReadSetUploadPartsCommand.js +41 -0
  21. package/dist-es/commands/UploadReadSetPartCommand.js +42 -0
  22. package/dist-es/commands/index.js +6 -0
  23. package/dist-es/models/models_0.js +78 -52
  24. package/dist-es/pagination/ListMultipartReadSetUploadsPaginator.js +25 -0
  25. package/dist-es/pagination/ListReadSetUploadPartsPaginator.js +25 -0
  26. package/dist-es/pagination/index.js +2 -0
  27. package/dist-es/protocols/Aws_restJson1.js +612 -2
  28. package/dist-types/Omics.d.ts +43 -1
  29. package/dist-types/OmicsClient.d.ts +12 -5
  30. package/dist-types/commands/AbortMultipartReadSetUploadCommand.d.ts +96 -0
  31. package/dist-types/commands/CompleteMultipartReadSetUploadCommand.d.ts +105 -0
  32. package/dist-types/commands/CreateMultipartReadSetUploadCommand.d.ts +120 -0
  33. package/dist-types/commands/CreateRunGroupCommand.d.ts +1 -0
  34. package/dist-types/commands/CreateSequenceStoreCommand.d.ts +2 -0
  35. package/dist-types/commands/CreateWorkflowCommand.d.ts +1 -0
  36. package/dist-types/commands/GetAnnotationImportJobCommand.d.ts +3 -0
  37. package/dist-types/commands/GetReadSetMetadataCommand.d.ts +1 -0
  38. package/dist-types/commands/GetRunCommand.d.ts +1 -0
  39. package/dist-types/commands/GetRunGroupCommand.d.ts +1 -0
  40. package/dist-types/commands/GetRunTaskCommand.d.ts +1 -0
  41. package/dist-types/commands/GetSequenceStoreCommand.d.ts +1 -0
  42. package/dist-types/commands/GetVariantImportJobCommand.d.ts +3 -0
  43. package/dist-types/commands/GetWorkflowCommand.d.ts +4 -0
  44. package/dist-types/commands/ListAnnotationImportJobsCommand.d.ts +3 -0
  45. package/dist-types/commands/ListMultipartReadSetUploadsCommand.d.ts +116 -0
  46. package/dist-types/commands/ListReadSetUploadPartsCommand.d.ts +115 -0
  47. package/dist-types/commands/ListReadSetsCommand.d.ts +4 -0
  48. package/dist-types/commands/ListRunGroupsCommand.d.ts +1 -0
  49. package/dist-types/commands/ListRunTasksCommand.d.ts +1 -0
  50. package/dist-types/commands/ListRunsCommand.d.ts +1 -0
  51. package/dist-types/commands/ListSequenceStoresCommand.d.ts +1 -0
  52. package/dist-types/commands/ListVariantImportJobsCommand.d.ts +3 -0
  53. package/dist-types/commands/ListWorkflowsCommand.d.ts +3 -0
  54. package/dist-types/commands/StartAnnotationImportJobCommand.d.ts +3 -0
  55. package/dist-types/commands/StartVariantImportJobCommand.d.ts +3 -0
  56. package/dist-types/commands/UpdateRunGroupCommand.d.ts +1 -0
  57. package/dist-types/commands/UploadReadSetPartCommand.d.ts +111 -0
  58. package/dist-types/commands/index.d.ts +6 -0
  59. package/dist-types/endpoint/EndpointParameters.d.ts +2 -1
  60. package/dist-types/models/models_0.d.ts +825 -119
  61. package/dist-types/pagination/ListMultipartReadSetUploadsPaginator.d.ts +7 -0
  62. package/dist-types/pagination/ListReadSetUploadPartsPaginator.d.ts +7 -0
  63. package/dist-types/pagination/index.d.ts +2 -0
  64. package/dist-types/protocols/Aws_restJson1.d.ts +57 -2
  65. package/dist-types/runtimeConfig.browser.d.ts +12 -12
  66. package/dist-types/runtimeConfig.d.ts +9 -9
  67. package/dist-types/runtimeConfig.native.d.ts +13 -13
  68. package/dist-types/runtimeConfig.shared.d.ts +4 -4
  69. package/dist-types/ts3.4/Omics.d.ts +102 -0
  70. package/dist-types/ts3.4/OmicsClient.d.ts +45 -7
  71. package/dist-types/ts3.4/commands/AbortMultipartReadSetUploadCommand.d.ts +41 -0
  72. package/dist-types/ts3.4/commands/CompleteMultipartReadSetUploadCommand.d.ts +41 -0
  73. package/dist-types/ts3.4/commands/CreateMultipartReadSetUploadCommand.d.ts +41 -0
  74. package/dist-types/ts3.4/commands/ListMultipartReadSetUploadsCommand.d.ts +41 -0
  75. package/dist-types/ts3.4/commands/ListReadSetUploadPartsCommand.d.ts +41 -0
  76. package/dist-types/ts3.4/commands/UploadReadSetPartCommand.d.ts +44 -0
  77. package/dist-types/ts3.4/commands/index.d.ts +6 -0
  78. package/dist-types/ts3.4/endpoint/EndpointParameters.d.ts +1 -2
  79. package/dist-types/ts3.4/models/models_0.d.ts +202 -52
  80. package/dist-types/ts3.4/pagination/ListMultipartReadSetUploadsPaginator.d.ts +11 -0
  81. package/dist-types/ts3.4/pagination/ListReadSetUploadPartsPaginator.d.ts +11 -0
  82. package/dist-types/ts3.4/pagination/index.d.ts +2 -0
  83. package/dist-types/ts3.4/protocols/Aws_restJson1.d.ts +74 -4
  84. package/dist-types/ts3.4/runtimeConfig.browser.d.ts +18 -15
  85. package/dist-types/ts3.4/runtimeConfig.d.ts +12 -12
  86. package/dist-types/ts3.4/runtimeConfig.native.d.ts +20 -15
  87. package/dist-types/ts3.4/runtimeConfig.shared.d.ts +4 -4
  88. package/package.json +7 -6
@@ -0,0 +1,41 @@
1
+ import { EndpointParameterInstructions } from "@aws-sdk/middleware-endpoint";
2
+ import { Command as $Command } from "@aws-sdk/smithy-client";
3
+ import {
4
+ Handler,
5
+ HttpHandlerOptions as __HttpHandlerOptions,
6
+ MetadataBearer as __MetadataBearer,
7
+ MiddlewareStack,
8
+ } from "@aws-sdk/types";
9
+ import {
10
+ AbortMultipartReadSetUploadRequest,
11
+ AbortMultipartReadSetUploadResponse,
12
+ } from "../models/models_0";
13
+ import {
14
+ OmicsClientResolvedConfig,
15
+ ServiceInputTypes,
16
+ ServiceOutputTypes,
17
+ } from "../OmicsClient";
18
+ export interface AbortMultipartReadSetUploadCommandInput
19
+ extends AbortMultipartReadSetUploadRequest {}
20
+ export interface AbortMultipartReadSetUploadCommandOutput
21
+ extends AbortMultipartReadSetUploadResponse,
22
+ __MetadataBearer {}
23
+ export declare class AbortMultipartReadSetUploadCommand extends $Command<
24
+ AbortMultipartReadSetUploadCommandInput,
25
+ AbortMultipartReadSetUploadCommandOutput,
26
+ OmicsClientResolvedConfig
27
+ > {
28
+ readonly input: AbortMultipartReadSetUploadCommandInput;
29
+ static getEndpointParameterInstructions(): EndpointParameterInstructions;
30
+ constructor(input: AbortMultipartReadSetUploadCommandInput);
31
+ resolveMiddleware(
32
+ clientStack: MiddlewareStack<ServiceInputTypes, ServiceOutputTypes>,
33
+ configuration: OmicsClientResolvedConfig,
34
+ options?: __HttpHandlerOptions
35
+ ): Handler<
36
+ AbortMultipartReadSetUploadCommandInput,
37
+ AbortMultipartReadSetUploadCommandOutput
38
+ >;
39
+ private serialize;
40
+ private deserialize;
41
+ }
@@ -0,0 +1,41 @@
1
+ import { EndpointParameterInstructions } from "@aws-sdk/middleware-endpoint";
2
+ import { Command as $Command } from "@aws-sdk/smithy-client";
3
+ import {
4
+ Handler,
5
+ HttpHandlerOptions as __HttpHandlerOptions,
6
+ MetadataBearer as __MetadataBearer,
7
+ MiddlewareStack,
8
+ } from "@aws-sdk/types";
9
+ import {
10
+ CompleteMultipartReadSetUploadRequest,
11
+ CompleteMultipartReadSetUploadResponse,
12
+ } from "../models/models_0";
13
+ import {
14
+ OmicsClientResolvedConfig,
15
+ ServiceInputTypes,
16
+ ServiceOutputTypes,
17
+ } from "../OmicsClient";
18
+ export interface CompleteMultipartReadSetUploadCommandInput
19
+ extends CompleteMultipartReadSetUploadRequest {}
20
+ export interface CompleteMultipartReadSetUploadCommandOutput
21
+ extends CompleteMultipartReadSetUploadResponse,
22
+ __MetadataBearer {}
23
+ export declare class CompleteMultipartReadSetUploadCommand extends $Command<
24
+ CompleteMultipartReadSetUploadCommandInput,
25
+ CompleteMultipartReadSetUploadCommandOutput,
26
+ OmicsClientResolvedConfig
27
+ > {
28
+ readonly input: CompleteMultipartReadSetUploadCommandInput;
29
+ static getEndpointParameterInstructions(): EndpointParameterInstructions;
30
+ constructor(input: CompleteMultipartReadSetUploadCommandInput);
31
+ resolveMiddleware(
32
+ clientStack: MiddlewareStack<ServiceInputTypes, ServiceOutputTypes>,
33
+ configuration: OmicsClientResolvedConfig,
34
+ options?: __HttpHandlerOptions
35
+ ): Handler<
36
+ CompleteMultipartReadSetUploadCommandInput,
37
+ CompleteMultipartReadSetUploadCommandOutput
38
+ >;
39
+ private serialize;
40
+ private deserialize;
41
+ }
@@ -0,0 +1,41 @@
1
+ import { EndpointParameterInstructions } from "@aws-sdk/middleware-endpoint";
2
+ import { Command as $Command } from "@aws-sdk/smithy-client";
3
+ import {
4
+ Handler,
5
+ HttpHandlerOptions as __HttpHandlerOptions,
6
+ MetadataBearer as __MetadataBearer,
7
+ MiddlewareStack,
8
+ } from "@aws-sdk/types";
9
+ import {
10
+ CreateMultipartReadSetUploadRequest,
11
+ CreateMultipartReadSetUploadResponse,
12
+ } from "../models/models_0";
13
+ import {
14
+ OmicsClientResolvedConfig,
15
+ ServiceInputTypes,
16
+ ServiceOutputTypes,
17
+ } from "../OmicsClient";
18
+ export interface CreateMultipartReadSetUploadCommandInput
19
+ extends CreateMultipartReadSetUploadRequest {}
20
+ export interface CreateMultipartReadSetUploadCommandOutput
21
+ extends CreateMultipartReadSetUploadResponse,
22
+ __MetadataBearer {}
23
+ export declare class CreateMultipartReadSetUploadCommand extends $Command<
24
+ CreateMultipartReadSetUploadCommandInput,
25
+ CreateMultipartReadSetUploadCommandOutput,
26
+ OmicsClientResolvedConfig
27
+ > {
28
+ readonly input: CreateMultipartReadSetUploadCommandInput;
29
+ static getEndpointParameterInstructions(): EndpointParameterInstructions;
30
+ constructor(input: CreateMultipartReadSetUploadCommandInput);
31
+ resolveMiddleware(
32
+ clientStack: MiddlewareStack<ServiceInputTypes, ServiceOutputTypes>,
33
+ configuration: OmicsClientResolvedConfig,
34
+ options?: __HttpHandlerOptions
35
+ ): Handler<
36
+ CreateMultipartReadSetUploadCommandInput,
37
+ CreateMultipartReadSetUploadCommandOutput
38
+ >;
39
+ private serialize;
40
+ private deserialize;
41
+ }
@@ -0,0 +1,41 @@
1
+ import { EndpointParameterInstructions } from "@aws-sdk/middleware-endpoint";
2
+ import { Command as $Command } from "@aws-sdk/smithy-client";
3
+ import {
4
+ Handler,
5
+ HttpHandlerOptions as __HttpHandlerOptions,
6
+ MetadataBearer as __MetadataBearer,
7
+ MiddlewareStack,
8
+ } from "@aws-sdk/types";
9
+ import {
10
+ ListMultipartReadSetUploadsRequest,
11
+ ListMultipartReadSetUploadsResponse,
12
+ } from "../models/models_0";
13
+ import {
14
+ OmicsClientResolvedConfig,
15
+ ServiceInputTypes,
16
+ ServiceOutputTypes,
17
+ } from "../OmicsClient";
18
+ export interface ListMultipartReadSetUploadsCommandInput
19
+ extends ListMultipartReadSetUploadsRequest {}
20
+ export interface ListMultipartReadSetUploadsCommandOutput
21
+ extends ListMultipartReadSetUploadsResponse,
22
+ __MetadataBearer {}
23
+ export declare class ListMultipartReadSetUploadsCommand extends $Command<
24
+ ListMultipartReadSetUploadsCommandInput,
25
+ ListMultipartReadSetUploadsCommandOutput,
26
+ OmicsClientResolvedConfig
27
+ > {
28
+ readonly input: ListMultipartReadSetUploadsCommandInput;
29
+ static getEndpointParameterInstructions(): EndpointParameterInstructions;
30
+ constructor(input: ListMultipartReadSetUploadsCommandInput);
31
+ resolveMiddleware(
32
+ clientStack: MiddlewareStack<ServiceInputTypes, ServiceOutputTypes>,
33
+ configuration: OmicsClientResolvedConfig,
34
+ options?: __HttpHandlerOptions
35
+ ): Handler<
36
+ ListMultipartReadSetUploadsCommandInput,
37
+ ListMultipartReadSetUploadsCommandOutput
38
+ >;
39
+ private serialize;
40
+ private deserialize;
41
+ }
@@ -0,0 +1,41 @@
1
+ import { EndpointParameterInstructions } from "@aws-sdk/middleware-endpoint";
2
+ import { Command as $Command } from "@aws-sdk/smithy-client";
3
+ import {
4
+ Handler,
5
+ HttpHandlerOptions as __HttpHandlerOptions,
6
+ MetadataBearer as __MetadataBearer,
7
+ MiddlewareStack,
8
+ } from "@aws-sdk/types";
9
+ import {
10
+ ListReadSetUploadPartsRequest,
11
+ ListReadSetUploadPartsResponse,
12
+ } from "../models/models_0";
13
+ import {
14
+ OmicsClientResolvedConfig,
15
+ ServiceInputTypes,
16
+ ServiceOutputTypes,
17
+ } from "../OmicsClient";
18
+ export interface ListReadSetUploadPartsCommandInput
19
+ extends ListReadSetUploadPartsRequest {}
20
+ export interface ListReadSetUploadPartsCommandOutput
21
+ extends ListReadSetUploadPartsResponse,
22
+ __MetadataBearer {}
23
+ export declare class ListReadSetUploadPartsCommand extends $Command<
24
+ ListReadSetUploadPartsCommandInput,
25
+ ListReadSetUploadPartsCommandOutput,
26
+ OmicsClientResolvedConfig
27
+ > {
28
+ readonly input: ListReadSetUploadPartsCommandInput;
29
+ static getEndpointParameterInstructions(): EndpointParameterInstructions;
30
+ constructor(input: ListReadSetUploadPartsCommandInput);
31
+ resolveMiddleware(
32
+ clientStack: MiddlewareStack<ServiceInputTypes, ServiceOutputTypes>,
33
+ configuration: OmicsClientResolvedConfig,
34
+ options?: __HttpHandlerOptions
35
+ ): Handler<
36
+ ListReadSetUploadPartsCommandInput,
37
+ ListReadSetUploadPartsCommandOutput
38
+ >;
39
+ private serialize;
40
+ private deserialize;
41
+ }
@@ -0,0 +1,44 @@
1
+ import { EndpointParameterInstructions } from "@aws-sdk/middleware-endpoint";
2
+ import { Command as $Command } from "@aws-sdk/smithy-client";
3
+ import {
4
+ Handler,
5
+ HttpHandlerOptions as __HttpHandlerOptions,
6
+ MetadataBearer as __MetadataBearer,
7
+ MiddlewareStack,
8
+ } from "@aws-sdk/types";
9
+ import {
10
+ UploadReadSetPartRequest,
11
+ UploadReadSetPartResponse,
12
+ } from "../models/models_0";
13
+ import {
14
+ OmicsClientResolvedConfig,
15
+ ServiceInputTypes,
16
+ ServiceOutputTypes,
17
+ } from "../OmicsClient";
18
+ export type UploadReadSetPartCommandInputType = Pick<
19
+ UploadReadSetPartRequest,
20
+ Exclude<keyof UploadReadSetPartRequest, "payload">
21
+ > & {
22
+ payload: UploadReadSetPartRequest["payload"] | string | Uint8Array | Buffer;
23
+ };
24
+ export interface UploadReadSetPartCommandInput
25
+ extends UploadReadSetPartCommandInputType {}
26
+ export interface UploadReadSetPartCommandOutput
27
+ extends UploadReadSetPartResponse,
28
+ __MetadataBearer {}
29
+ export declare class UploadReadSetPartCommand extends $Command<
30
+ UploadReadSetPartCommandInput,
31
+ UploadReadSetPartCommandOutput,
32
+ OmicsClientResolvedConfig
33
+ > {
34
+ readonly input: UploadReadSetPartCommandInput;
35
+ static getEndpointParameterInstructions(): EndpointParameterInstructions;
36
+ constructor(input: UploadReadSetPartCommandInput);
37
+ resolveMiddleware(
38
+ clientStack: MiddlewareStack<ServiceInputTypes, ServiceOutputTypes>,
39
+ configuration: OmicsClientResolvedConfig,
40
+ options?: __HttpHandlerOptions
41
+ ): Handler<UploadReadSetPartCommandInput, UploadReadSetPartCommandOutput>;
42
+ private serialize;
43
+ private deserialize;
44
+ }
@@ -1,8 +1,11 @@
1
+ export * from "./AbortMultipartReadSetUploadCommand";
1
2
  export * from "./BatchDeleteReadSetCommand";
2
3
  export * from "./CancelAnnotationImportJobCommand";
3
4
  export * from "./CancelRunCommand";
4
5
  export * from "./CancelVariantImportJobCommand";
6
+ export * from "./CompleteMultipartReadSetUploadCommand";
5
7
  export * from "./CreateAnnotationStoreCommand";
8
+ export * from "./CreateMultipartReadSetUploadCommand";
6
9
  export * from "./CreateReferenceStoreCommand";
7
10
  export * from "./CreateRunGroupCommand";
8
11
  export * from "./CreateSequenceStoreCommand";
@@ -36,9 +39,11 @@ export * from "./GetVariantStoreCommand";
36
39
  export * from "./GetWorkflowCommand";
37
40
  export * from "./ListAnnotationImportJobsCommand";
38
41
  export * from "./ListAnnotationStoresCommand";
42
+ export * from "./ListMultipartReadSetUploadsCommand";
39
43
  export * from "./ListReadSetActivationJobsCommand";
40
44
  export * from "./ListReadSetExportJobsCommand";
41
45
  export * from "./ListReadSetImportJobsCommand";
46
+ export * from "./ListReadSetUploadPartsCommand";
42
47
  export * from "./ListReadSetsCommand";
43
48
  export * from "./ListReferenceImportJobsCommand";
44
49
  export * from "./ListReferenceStoresCommand";
@@ -64,3 +69,4 @@ export * from "./UpdateAnnotationStoreCommand";
64
69
  export * from "./UpdateRunGroupCommand";
65
70
  export * from "./UpdateVariantStoreCommand";
66
71
  export * from "./UpdateWorkflowCommand";
72
+ export * from "./UploadReadSetPartCommand";
@@ -1,9 +1,8 @@
1
1
  import {
2
- Endpoint,
3
2
  EndpointParameters as __EndpointParameters,
4
3
  EndpointV2,
5
- Provider,
6
4
  } from "@aws-sdk/types";
5
+ import { Endpoint, Provider } from "@smithy/types";
7
6
  export interface ClientInputEndpointParameters {
8
7
  region?: string | Provider<string>;
9
8
  useDualstackEndpoint?: boolean | Provider<boolean>;