@apollo-annotation/shared 0.3.13 → 1.0.0

package/src/Operations/GetAssembliesOperation.ts

@@ -1,28 +0,0 @@
-/* eslint-disable @typescript-eslint/require-await */
-import {
-  type LocalGFF3DataStore,
-  Operation,
-  type SerializedOperation,
-  type ServerDataStore,
-} from '@apollo-annotation/common'
-
-interface SerializedGetAssembliesOperation extends SerializedOperation {
-  typeName: 'GetAssembliesOperation'
-}
-
-export class GetAssembliesOperation extends Operation {
-  typeName = 'GetAssembliesOperation' as const
-
-  toJSON(): SerializedGetAssembliesOperation {
-    const { typeName } = this
-    return { typeName }
-  }
-
-  executeOnServer(backend: ServerDataStore) {
-    return backend.assemblyModel.find({ status: 0 }).exec()
-  }
-
-  async executeOnLocalGFF3(_backend: LocalGFF3DataStore) {
-    throw new Error('executeOnLocalGFF3 not implemented')
-  }
-}

package/src/Operations/GetFeaturesOperation.ts

@@ -1,58 +0,0 @@
-/* eslint-disable @typescript-eslint/require-await */
-import {
-  type LocalGFF3DataStore,
-  Operation,
-  type OperationOptions,
-  type SerializedOperation,
-  type ServerDataStore,
-} from '@apollo-annotation/common'
-
-interface SerializedGetFeaturesOperation extends SerializedOperation {
-  typeName: 'GetFeaturesOperation'
-  refSeq: string
-  start: number
-  end: number
-}
-
-export class GetFeaturesOperation extends Operation {
-  typeName = 'GetFeaturesOperation' as const
-  refSeq: string
-  start: number
-  end: number
-
-  constructor(
-    json: SerializedGetFeaturesOperation,
-    options?: OperationOptions,
-  ) {
-    super(json, options)
-    this.refSeq = json.refSeq
-    this.start = json.start
-    this.end = json.end
-  }
-
-  toJSON(): SerializedGetFeaturesOperation {
-    const { end, refSeq, start, typeName } = this
-    return { typeName, refSeq, start, end }
-  }
-
-  /**
-   * Fetch features based on Reference seq, Start and End -values
-   * @param request - Contain search criteria i.e. refSeq, start and end -parameters
-   * @returns Return Array of features if search was successful
-   * or if search data was not found or in case of error throw exception
-   */
-  executeOnServer(backend: ServerDataStore) {
-    return backend.featureModel
-      .find({
-        refSeq: this.refSeq,
-        min: { $lte: this.end },
-        max: { $gte: this.start },
-        status: 0,
-      })
-      .exec()
-  }
-
-  async executeOnLocalGFF3(_backend: LocalGFF3DataStore) {
-    throw new Error('executeOnLocalGFF3 not implemented')
-  }
-}

package/src/Operations/index.ts

@@ -1,6 +0,0 @@
-import { GetAssembliesOperation } from './GetAssembliesOperation.js'
-import { GetFeaturesOperation } from './GetFeaturesOperation.js'
-
-export const operations = { GetAssembliesOperation, GetFeaturesOperation }
-export * from './GetAssembliesOperation.js'
-export * from './GetFeaturesOperation.js'