@apollo-annotation/jbrowse-plugin-apollo 0.3.11 → 0.3.13

package/dist/LinearApolloReferenceSequenceDisplay/stateModel/index.d.ts

@@ -0,0 +1,245 @@
+import type PluginManager from '@jbrowse/core/PluginManager';
+import type { AnyConfigurationSchemaType } from '@jbrowse/core/configuration';
+import type { Instance } from '@jbrowse/mobx-state-tree';
+export declare function stateModelFactory(pluginManager: PluginManager, configSchema: AnyConfigurationSchemaType): import("@jbrowse/mobx-state-tree").IModelType<{
+    id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
+    type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
+    rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
+} & {
+    type: import("@jbrowse/mobx-state-tree").ISimpleType<"LinearApolloReferenceSequenceDisplay">;
+    configuration: AnyConfigurationSchemaType;
+    showStartCodons: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
+    showStopCodons: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
+    highContrast: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
+    heightPreConfig: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
+    sequenceRowHeight: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
+}, {
+    rendererTypeName: string;
+    error: unknown;
+    statusMessage: string | undefined;
+} & {
+    readonly RenderingComponent: import("react").FC<{
+        model: {
+            id: string;
+            type: string;
+            rpcDriverName: string | undefined;
+        } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
+            rendererTypeName: string;
+            error: unknown;
+            statusMessage: string | undefined;
+        } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
+            id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
+            type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
+            rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
+        }, {
+            rendererTypeName: string;
+            error: unknown;
+            statusMessage: string | undefined;
+        }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
+        onHorizontalScroll?: () => void;
+        blockState?: Record<string, any>;
+    }>;
+    readonly DisplayBlurb: import("react").FC<{
+        model: {
+            id: string;
+            type: string;
+            rpcDriverName: string | undefined;
+        } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
+            rendererTypeName: string;
+            error: unknown;
+            statusMessage: string | undefined;
+        } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
+            id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
+            type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
+            rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
+        }, {
+            rendererTypeName: string;
+            error: unknown;
+            statusMessage: string | undefined;
+        }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
+    }> | null;
+    readonly adapterConfig: any;
+    readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
+    readonly isMinimized: boolean;
+    readonly parentDisplay: any;
+    readonly effectiveRpcDriverName: any;
+} & {
+    renderProps(): any;
+    renderingProps(): {
+        displayModel: {
+            id: string;
+            type: string;
+            rpcDriverName: string | undefined;
+        } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
+            rendererTypeName: string;
+            error: unknown;
+            statusMessage: string | undefined;
+        } & {
+            readonly RenderingComponent: import("react").FC<{
+                model: {
+                    id: string;
+                    type: string;
+                    rpcDriverName: string | undefined;
+                } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
+                    rendererTypeName: string;
+                    error: unknown;
+                    statusMessage: string | undefined;
+                } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
+                    id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
+                    type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
+                    rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
+                }, {
+                    rendererTypeName: string;
+                    error: unknown;
+                    statusMessage: string | undefined;
+                }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
+                onHorizontalScroll?: () => void;
+                blockState?: Record<string, any>;
+            }>;
+            readonly DisplayBlurb: import("react").FC<{
+                model: {
+                    id: string;
+                    type: string;
+                    rpcDriverName: string | undefined;
+                } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
+                    rendererTypeName: string;
+                    error: unknown;
+                    statusMessage: string | undefined;
+                } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
+                    id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
+                    type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
+                    rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
+                }, {
+                    rendererTypeName: string;
+                    error: unknown;
+                    statusMessage: string | undefined;
+                }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
+            }> | null;
+            readonly adapterConfig: any;
+            readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
+            readonly isMinimized: boolean;
+            readonly parentDisplay: any;
+            readonly effectiveRpcDriverName: any;
+        } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
+            id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
+            type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
+            rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
+        }, {
+            rendererTypeName: string;
+            error: unknown;
+            statusMessage: string | undefined;
+        } & {
+            readonly RenderingComponent: import("react").FC<{
+                model: {
+                    id: string;
+                    type: string;
+                    rpcDriverName: string | undefined;
+                } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
+                    rendererTypeName: string;
+                    error: unknown;
+                    statusMessage: string | undefined;
+                } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
+                    id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
+                    type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
+                    rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
+                }, {
+                    rendererTypeName: string;
+                    error: unknown;
+                    statusMessage: string | undefined;
+                }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
+                onHorizontalScroll?: () => void;
+                blockState?: Record<string, any>;
+            }>;
+            readonly DisplayBlurb: import("react").FC<{
+                model: {
+                    id: string;
+                    type: string;
+                    rpcDriverName: string | undefined;
+                } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
+                    rendererTypeName: string;
+                    error: unknown;
+                    statusMessage: string | undefined;
+                } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
+                    id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
+                    type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
+                    rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
+                }, {
+                    rendererTypeName: string;
+                    error: unknown;
+                    statusMessage: string | undefined;
+                }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
+            }> | null;
+            readonly adapterConfig: any;
+            readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
+            readonly isMinimized: boolean;
+            readonly parentDisplay: any;
+            readonly effectiveRpcDriverName: any;
+        }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
+    };
+    readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
+    readonly DisplayMessageComponent: undefined | import("react").FC<any>;
+    trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
+    readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
+    regionCannotBeRendered(): null;
+} & {
+    setStatusMessage(arg?: string): void;
+    setError(error?: unknown): void;
+    setRpcDriverName(rpcDriverName: string): void;
+    reload(): void;
+} & {
+    renderProps(): any;
+} & {
+    readonly lgv: import("@jbrowse/plugin-linear-genome-view").LinearGenomeViewModel;
+} & {
+    readonly rendererTypeName: any;
+    readonly session: import("../../session").ApolloSessionModel;
+    readonly regions: {
+        assemblyName: string;
+        refName: string;
+        start: number;
+        end: number;
+    }[];
+    regionCannotBeRendered(): "Zoom in to see sequence" | undefined;
+} & {
+    readonly apolloInternetAccount: import("../../ApolloInternetAccount/model").ApolloInternetAccountModel | undefined;
+    readonly changeManager: import("../../ChangeManager").ChangeManager;
+    getAssemblyId(assemblyName: string): string;
+    readonly selectedFeature: import("@apollo-annotation/mst").AnnotationFeature | undefined;
+    readonly hoveredFeature: import("../../session").HoveredFeature | undefined;
+    readonly height: number;
+} & {
+    scrollTop: number;
+} & {
+    setScrollTop(scrollTop: number): void;
+    setHeight(displayHeight: number): number;
+    resizeHeight(distance: number): number;
+    toggleShowStartCodons(): void;
+    toggleShowStopCodons(): void;
+    toggleHighContrast(): void;
+} & {
+    trackMenuItems(): (import("@jbrowse/core/ui").MenuDivider | import("@jbrowse/core/ui").MenuSubHeader | import("@jbrowse/core/ui").NormalMenuItem | import("@jbrowse/core/ui").CheckboxMenuItem | import("@jbrowse/core/ui").RadioMenuItem | import("@jbrowse/core/ui").SubMenuItem | {
+        type: string;
+        label: string;
+        subMenu: {
+            label: string;
+            type: string;
+            checked: boolean;
+            onClick: () => void;
+        }[];
+    })[];
+} & {
+    afterAttach(): void;
+} & {
+    seqTrackCanvas: HTMLCanvasElement | null;
+    seqTrackOverlayCanvas: HTMLCanvasElement | null;
+    theme: import("@mui/material").Theme;
+} & {
+    setSeqTrackCanvas(canvas: HTMLCanvasElement | null): void;
+    setSeqTrackOverlayCanvas(canvas: HTMLCanvasElement | null): void;
+    setTheme(theme: import("@mui/material").Theme): void;
+    afterAttach(): void;
+}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>;
+export type LinearApolloReferenceSequenceDisplayStateModel = ReturnType<typeof stateModelFactory>;
+export interface LinearApolloReferenceSequenceDisplay extends Instance<LinearApolloReferenceSequenceDisplayStateModel> {
+}
+//# sourceMappingURL=index.d.ts.map

package/dist/LinearApolloReferenceSequenceDisplay/stateModel/index.d.ts.map

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package/dist/LinearApolloReferenceSequenceDisplay/stateModel/rendering.d.ts

@@ -0,0 +1,246 @@
+import type PluginManager from '@jbrowse/core/PluginManager';
+import type { AnyConfigurationSchemaType } from '@jbrowse/core/configuration';
+import { type Instance } from '@jbrowse/mobx-state-tree';
+import { type Theme } from '@mui/material';
+export declare function renderingModelFactory(pluginManager: PluginManager, configSchema: AnyConfigurationSchemaType): import("@jbrowse/mobx-state-tree").IModelType<{
+    id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
+    type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
+    rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
+} & {
+    type: import("@jbrowse/mobx-state-tree").ISimpleType<"LinearApolloReferenceSequenceDisplay">;
+    configuration: AnyConfigurationSchemaType;
+    showStartCodons: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
+    showStopCodons: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
+    highContrast: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
+    heightPreConfig: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
+    sequenceRowHeight: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
+}, {
+    rendererTypeName: string;
+    error: unknown;
+    statusMessage: string | undefined;
+} & {
+    readonly RenderingComponent: import("react").FC<{
+        model: {
+            id: string;
+            type: string;
+            rpcDriverName: string | undefined;
+        } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
+            rendererTypeName: string;
+            error: unknown;
+            statusMessage: string | undefined;
+        } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
+            id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
+            type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
+            rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
+        }, {
+            rendererTypeName: string;
+            error: unknown;
+            statusMessage: string | undefined;
+        }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
+        onHorizontalScroll?: () => void;
+        blockState?: Record<string, any>;
+    }>;
+    readonly DisplayBlurb: import("react").FC<{
+        model: {
+            id: string;
+            type: string;
+            rpcDriverName: string | undefined;
+        } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
+            rendererTypeName: string;
+            error: unknown;
+            statusMessage: string | undefined;
+        } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
+            id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
+            type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
+            rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
+        }, {
+            rendererTypeName: string;
+            error: unknown;
+            statusMessage: string | undefined;
+        }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
+    }> | null;
+    readonly adapterConfig: any;
+    readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
+    readonly isMinimized: boolean;
+    readonly parentDisplay: any;
+    readonly effectiveRpcDriverName: any;
+} & {
+    renderProps(): any;
+    renderingProps(): {
+        displayModel: {
+            id: string;
+            type: string;
+            rpcDriverName: string | undefined;
+        } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
+            rendererTypeName: string;
+            error: unknown;
+            statusMessage: string | undefined;
+        } & {
+            readonly RenderingComponent: import("react").FC<{
+                model: {
+                    id: string;
+                    type: string;
+                    rpcDriverName: string | undefined;
+                } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
+                    rendererTypeName: string;
+                    error: unknown;
+                    statusMessage: string | undefined;
+                } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
+                    id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
+                    type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
+                    rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
+                }, {
+                    rendererTypeName: string;
+                    error: unknown;
+                    statusMessage: string | undefined;
+                }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
+                onHorizontalScroll?: () => void;
+                blockState?: Record<string, any>;
+            }>;
+            readonly DisplayBlurb: import("react").FC<{
+                model: {
+                    id: string;
+                    type: string;
+                    rpcDriverName: string | undefined;
+                } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
+                    rendererTypeName: string;
+                    error: unknown;
+                    statusMessage: string | undefined;
+                } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
+                    id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
+                    type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
+                    rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
+                }, {
+                    rendererTypeName: string;
+                    error: unknown;
+                    statusMessage: string | undefined;
+                }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
+            }> | null;
+            readonly adapterConfig: any;
+            readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
+            readonly isMinimized: boolean;
+            readonly parentDisplay: any;
+            readonly effectiveRpcDriverName: any;
+        } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
+            id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
+            type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
+            rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
+        }, {
+            rendererTypeName: string;
+            error: unknown;
+            statusMessage: string | undefined;
+        } & {
+            readonly RenderingComponent: import("react").FC<{
+                model: {
+                    id: string;
+                    type: string;
+                    rpcDriverName: string | undefined;
+                } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
+                    rendererTypeName: string;
+                    error: unknown;
+                    statusMessage: string | undefined;
+                } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
+                    id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
+                    type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
+                    rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
+                }, {
+                    rendererTypeName: string;
+                    error: unknown;
+                    statusMessage: string | undefined;
+                }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
+                onHorizontalScroll?: () => void;
+                blockState?: Record<string, any>;
+            }>;
+            readonly DisplayBlurb: import("react").FC<{
+                model: {
+                    id: string;
+                    type: string;
+                    rpcDriverName: string | undefined;
+                } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
+                    rendererTypeName: string;
+                    error: unknown;
+                    statusMessage: string | undefined;
+                } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
+                    id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
+                    type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
+                    rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
+                }, {
+                    rendererTypeName: string;
+                    error: unknown;
+                    statusMessage: string | undefined;
+                }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
+            }> | null;
+            readonly adapterConfig: any;
+            readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
+            readonly isMinimized: boolean;
+            readonly parentDisplay: any;
+            readonly effectiveRpcDriverName: any;
+        }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
+    };
+    readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
+    readonly DisplayMessageComponent: undefined | import("react").FC<any>;
+    trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
+    readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
+    regionCannotBeRendered(): null;
+} & {
+    setStatusMessage(arg?: string): void;
+    setError(error?: unknown): void;
+    setRpcDriverName(rpcDriverName: string): void;
+    reload(): void;
+} & {
+    renderProps(): any;
+} & {
+    readonly lgv: import("@jbrowse/plugin-linear-genome-view").LinearGenomeViewModel;
+} & {
+    readonly rendererTypeName: any;
+    readonly session: import("../../session").ApolloSessionModel;
+    readonly regions: {
+        assemblyName: string;
+        refName: string;
+        start: number;
+        end: number;
+    }[];
+    regionCannotBeRendered(): "Zoom in to see sequence" | undefined;
+} & {
+    readonly apolloInternetAccount: import("../../ApolloInternetAccount/model").ApolloInternetAccountModel | undefined;
+    readonly changeManager: import("../../ChangeManager").ChangeManager;
+    getAssemblyId(assemblyName: string): string;
+    readonly selectedFeature: import("@apollo-annotation/mst").AnnotationFeature | undefined;
+    readonly hoveredFeature: import("../../session").HoveredFeature | undefined;
+    readonly height: number;
+} & {
+    scrollTop: number;
+} & {
+    setScrollTop(scrollTop: number): void;
+    setHeight(displayHeight: number): number;
+    resizeHeight(distance: number): number;
+    toggleShowStartCodons(): void;
+    toggleShowStopCodons(): void;
+    toggleHighContrast(): void;
+} & {
+    trackMenuItems(): (import("@jbrowse/core/ui").MenuDivider | import("@jbrowse/core/ui").MenuSubHeader | import("@jbrowse/core/ui").NormalMenuItem | import("@jbrowse/core/ui").CheckboxMenuItem | import("@jbrowse/core/ui").RadioMenuItem | import("@jbrowse/core/ui").SubMenuItem | {
+        type: string;
+        label: string;
+        subMenu: {
+            label: string;
+            type: string;
+            checked: boolean;
+            onClick: () => void;
+        }[];
+    })[];
+} & {
+    afterAttach(): void;
+} & {
+    seqTrackCanvas: HTMLCanvasElement | null;
+    seqTrackOverlayCanvas: HTMLCanvasElement | null;
+    theme: Theme;
+} & {
+    setSeqTrackCanvas(canvas: HTMLCanvasElement | null): void;
+    setSeqTrackOverlayCanvas(canvas: HTMLCanvasElement | null): void;
+    setTheme(theme: Theme): void;
+    afterAttach(): void;
+}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>;
+export type LinearApolloReferenceSequenceDisplayRenderingModel = ReturnType<typeof renderingModelFactory>;
+export interface LinearApolloReferenceSequenceDisplayRendering extends Instance<LinearApolloReferenceSequenceDisplayRenderingModel> {
+}
+//# sourceMappingURL=rendering.d.ts.map

package/dist/LinearApolloReferenceSequenceDisplay/stateModel/rendering.d.ts.map

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package/dist/LinearApolloSixFrameDisplay/components/LinearApolloSixFrameDisplay.d.ts

@@ -0,0 +1,7 @@
+import type { LinearApolloSixFrameDisplay as LinearApolloSixFrameDisplayI } from '../stateModel';
+interface LinearApolloSixFrameDisplayProps {
+    model: LinearApolloSixFrameDisplayI;
+}
+export declare const LinearApolloSixFrameDisplay: (props: LinearApolloSixFrameDisplayProps, apolloDragging: any) => import("react/jsx-runtime").JSX.Element | null;
+export {};
+//# sourceMappingURL=LinearApolloSixFrameDisplay.d.ts.map

package/dist/LinearApolloSixFrameDisplay/components/LinearApolloSixFrameDisplay.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"LinearApolloSixFrameDisplay.d.ts","sourceRoot":"","sources":["../../../src/LinearApolloSixFrameDisplay/components/LinearApolloSixFrameDisplay.tsx"],"names":[],"mappings":"AAwBA,OAAO,KAAK,EAAE,2BAA2B,IAAI,4BAA4B,EAAE,MAAM,eAAe,CAAA;AAIhG,UAAU,gCAAgC;IACxC,KAAK,EAAE,4BAA4B,CAAA;CACpC;AAED,eAAO,MAAM,2BAA2B,UAE7B,gCAAgC,wEAsQ1C,CAAA"}

package/dist/LinearApolloSixFrameDisplay/components/TrackLines.d.ts

@@ -0,0 +1,8 @@
+import React from 'react';
+import type { LinearApolloSixFrameDisplay } from '../stateModel';
+export declare const TrackLines: ({ model, hrStyle, idx, }: {
+    model: LinearApolloSixFrameDisplay;
+    hrStyle?: React.CSSProperties;
+    idx: number;
+}) => import("react/jsx-runtime").JSX.Element;
+//# sourceMappingURL=TrackLines.d.ts.map

package/dist/LinearApolloSixFrameDisplay/components/TrackLines.d.ts.map

@@ -0,0 +1 @@
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package/dist/LinearApolloSixFrameDisplay/components/index.d.ts

@@ -0,0 +1,3 @@
+export * from './LinearApolloSixFrameDisplay';
+export * from './TrackLines';
+//# sourceMappingURL=index.d.ts.map

package/dist/LinearApolloSixFrameDisplay/components/index.d.ts.map

@@ -0,0 +1 @@
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package/dist/LinearApolloSixFrameDisplay/glyphs/GeneGlyph.d.ts

@@ -0,0 +1,3 @@
+import type { Glyph } from './Glyph';
+export declare const geneGlyph: Glyph;
+//# sourceMappingURL=GeneGlyph.d.ts.map

package/dist/LinearApolloSixFrameDisplay/glyphs/GeneGlyph.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"GeneGlyph.d.ts","sourceRoot":"","sources":["../../../src/LinearApolloSixFrameDisplay/glyphs/GeneGlyph.ts"],"names":[],"mappings":"AA0CA,OAAO,KAAK,EAAE,KAAK,EAAE,MAAM,SAAS,CAAA;AA28BpC,eAAO,MAAM,SAAS,EAAE,KAWvB,CAAA"}

package/dist/LinearApolloSixFrameDisplay/glyphs/Glyph.d.ts

@@ -0,0 +1,20 @@
+import type { AnnotationFeature } from '@apollo-annotation/mst';
+import type { MenuItem } from '@jbrowse/core/ui';
+import type { MousePositionWithFeature } from '../../util';
+import type { LinearApolloSixFrameDisplayMouseEvents } from '../stateModel/mouseEvents';
+import type { LinearApolloSixFrameDisplayRendering } from '../stateModel/rendering';
+import type { CanvasMouseEvent } from '../types';
+export interface Glyph {
+    /** draw the feature's primary rendering on the canvas */
+    draw(ctx: CanvasRenderingContext2D, feature: AnnotationFeature, row: number, stateModel: LinearApolloSixFrameDisplayRendering, displayedRegionIndex: number): void;
+    drawHover(display: LinearApolloSixFrameDisplayMouseEvents, overlayCtx: CanvasRenderingContext2D): void;
+    drawDragPreview(display: LinearApolloSixFrameDisplayMouseEvents, ctx: CanvasRenderingContext2D): void;
+    onMouseDown(display: LinearApolloSixFrameDisplayMouseEvents, currentMousePosition: MousePositionWithFeature, event: CanvasMouseEvent): void;
+    onMouseMove(display: LinearApolloSixFrameDisplayMouseEvents, currentMousePosition: MousePositionWithFeature, event: CanvasMouseEvent): void;
+    onMouseLeave(display: LinearApolloSixFrameDisplayMouseEvents, currentMousePosition: MousePositionWithFeature, event: CanvasMouseEvent): void;
+    onMouseUp(display: LinearApolloSixFrameDisplayMouseEvents, currentMousePosition: MousePositionWithFeature, event: CanvasMouseEvent): void;
+    drawTooltip(display: LinearApolloSixFrameDisplayMouseEvents, context: CanvasRenderingContext2D): void;
+    getContextMenuItemsForFeature(display: LinearApolloSixFrameDisplayMouseEvents, sourceFeature: AnnotationFeature): MenuItem[];
+    getContextMenuItems(display: LinearApolloSixFrameDisplayMouseEvents, currentMousePosition: MousePositionWithFeature): MenuItem[];
+}
+//# sourceMappingURL=Glyph.d.ts.map

package/dist/LinearApolloSixFrameDisplay/glyphs/Glyph.d.ts.map

@@ -0,0 +1 @@
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package/dist/LinearApolloSixFrameDisplay/glyphs/index.d.ts

@@ -0,0 +1,2 @@
+export * from './GeneGlyph';
+//# sourceMappingURL=index.d.ts.map

package/dist/LinearApolloSixFrameDisplay/glyphs/index.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../../src/LinearApolloSixFrameDisplay/glyphs/index.ts"],"names":[],"mappings":"AAAA,cAAc,aAAa,CAAA"}

package/dist/LinearApolloSixFrameDisplay/index.d.ts

@@ -0,0 +1,3 @@
+export { configSchema } from './configSchema';
+export { stateModelFactory } from './stateModel';
+//# sourceMappingURL=index.d.ts.map

package/dist/LinearApolloSixFrameDisplay/index.d.ts.map

@@ -0,0 +1 @@
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