@aperant/framework 0.6.2

package/dist/cli/commands/event.mjs.map

@@ -0,0 +1 @@
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package/dist/cli/commands/features-audit.d.mts

@@ -0,0 +1,2 @@
+export function cmdFeaturesAudit(projectDir: any, extraArgs: any): import("../util/result.mjs").CommandResult;
+//# sourceMappingURL=features-audit.d.mts.map

package/dist/cli/commands/features-audit.d.mts.map

@@ -0,0 +1 @@
+{"version":3,"file":"features-audit.d.mts","sourceRoot":"","sources":["../../../src/cli/commands/features-audit.mjs"],"names":[],"mappings":"AAsBA,8GA0DC"}

package/dist/cli/commands/features-audit.mjs

@@ -0,0 +1,134 @@
+/**
+ * commands/features-audit.mjs — CLI entry point for the features-registry
+ * audit (C33).
+ *
+ * Modes:
+ *   - report only (default): print `new_components`, `unregistered`, `stub_patches`
+ *   - `--apply-stubs`:        additionally write the stub patches to disk.
+ *                             This is what the /apt:execute post-step calls.
+ *
+ * Diff source precedence:
+ *   1. `--diff-files <a,b,c>` explicit CSV (highest priority)
+ *   2. `--since <ref>` → runs `git diff --name-only <ref>..HEAD`
+ *   3. fallback: `git diff HEAD --name-only` (current WIP)
+ */
+import { execFileSync } from 'node:child_process';
+import { resolve } from 'node:path';
+import { loadDocsPolicy, matchSurfaceToPolicy } from '../docs-audit/policy.mjs';
+import { applyStubPatches, auditFeatureRegistry } from '../features/registry-audit.mjs';
+import { parseFlags } from '../util/args.mjs';
+import { err, ok } from '../util/result.mjs';
+export function cmdFeaturesAudit(projectDir, extraArgs) {
+    if (!projectDir)
+        return err('Usage: apt-tools features-audit <project-dir> [flags]');
+    const root = resolve(projectDir);
+    const flags = parseFlags(extraArgs);
+    const diffFiles = resolveDiffFiles(root, flags);
+    const applyStubs = flags.has('apply-stubs');
+    const format = (flags.get('format') || 'json').toLowerCase();
+    const result = auditFeatureRegistry({ projectDir: root, diffFiles });
+    // Honor `.aperant/config.json.docs_policy`: only apply stubs for targets
+    // whose resolved policy is `auto-update`. This closes the skill-vs-code
+    // gap where `apt-execute` §3e-features promised `--apply-stubs` would
+    // no-op on surfaces the user opted out of. Patches whose target matches
+    // `skip` / `flag-drift` (or nothing) are surfaced in `stub_patches` but
+    // never written to disk.
+    let applied_patches = null;
+    let skipped_patches = null;
+    if (applyStubs && result.stub_patches.length > 0) {
+        const policy = loadDocsPolicy(root);
+        const eligible = [];
+        const skipped = [];
+        for (const patch of result.stub_patches) {
+            const policyValue = matchSurfaceToPolicy(patch.target, policy);
+            if (policyValue === 'auto-update') {
+                eligible.push(patch);
+            }
+            else {
+                skipped.push({ target: patch.target, policy: policyValue });
+            }
+        }
+        if (eligible.length > 0) {
+            applied_patches = applyStubPatches(root, eligible);
+        }
+        if (skipped.length > 0) {
+            skipped_patches = skipped;
+        }
+    }
+    if (format === 'md') {
+        return ok({
+            status: 'ok',
+            command: 'features-audit',
+            format: 'md',
+            markdown: renderMarkdown(result, applied_patches, skipped_patches),
+            ...result,
+            ...(applied_patches ? { applied_patches } : {}),
+            ...(skipped_patches ? { skipped_patches } : {}),
+        });
+    }
+    return ok({
+        status: 'ok',
+        command: 'features-audit',
+        ...result,
+        ...(applied_patches ? { applied_patches } : {}),
+        ...(skipped_patches ? { skipped_patches } : {}),
+    });
+}
+function resolveDiffFiles(root, flags) {
+    const explicit = flags.get('diff-files');
+    if (explicit && typeof explicit === 'string') {
+        return explicit
+            .split(',')
+            .map((s) => s.trim())
+            .filter(Boolean);
+    }
+    const since = flags.get('since');
+    try {
+        const args = since ? ['diff', '--name-only', `${since}..HEAD`] : ['diff', 'HEAD', '--name-only'];
+        const out = execFileSync('git', args, {
+            cwd: root,
+            encoding: 'utf-8',
+            stdio: ['ignore', 'pipe', 'ignore'],
+        });
+        return out
+            .split('\n')
+            .map((s) => s.trim())
+            .filter(Boolean);
+    }
+    catch {
+        // Not a git repo or HEAD doesn't exist — clean slate.
+        return [];
+    }
+}
+function renderMarkdown(result, applied, skipped) {
+    const lines = ['### Features audit', ''];
+    if (result.new_components.length === 0) {
+        lines.push('_No new feature-qualifying files in diff._');
+    }
+    else {
+        lines.push('**New candidates:**');
+        for (const c of result.new_components) {
+            lines.push(`- \`${c.file}\` — kind: \`${c.kind}\`, area: \`${c.area}\``);
+        }
+    }
+    if (result.unregistered.length > 0) {
+        lines.push('', '**Unregistered:**');
+        for (const u of result.unregistered) {
+            lines.push(`- \`${u.file}\` (area: \`${u.area}\`)`);
+        }
+    }
+    if (applied && applied.length > 0) {
+        lines.push('', '**Applied patches:**');
+        for (const p of applied) {
+            lines.push(`- ${p.target} — ${p.applied ? p.reason : `FAILED: ${p.reason}`}`);
+        }
+    }
+    if (skipped && skipped.length > 0) {
+        lines.push('', '**Skipped patches (policy opt-out):**');
+        for (const s of skipped) {
+            lines.push(`- ${s.target} — policy: \`${s.policy ?? 'unmatched'}\``);
+        }
+    }
+    return lines.join('\n');
+}
+//# sourceMappingURL=features-audit.mjs.map

package/dist/cli/commands/features-audit.mjs.map

@@ -0,0 +1 @@
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package/dist/cli/commands/gate.d.mts

@@ -0,0 +1,2 @@
+export function cmdGate(subcommand: any, projectDir: any, extraArgs: any): Promise<import("../util/result.mjs").CommandResult>;
+//# sourceMappingURL=gate.d.mts.map

package/dist/cli/commands/gate.d.mts.map

@@ -0,0 +1 @@
+{"version":3,"file":"gate.d.mts","sourceRoot":"","sources":["../../../src/cli/commands/gate.mjs"],"names":[],"mappings":"AAoCA,+HAWC"}

package/dist/cli/commands/gate.mjs

@@ -0,0 +1,255 @@
+/**
+ * commands/gate.mjs — `apt-tools gate <list|check>` CLI surface (C2).
+ *
+ * `list`  — enumerate registered gates, optionally filtered by --skill.
+ * `check` — run the gate set for --skill against --task-id, emit the C2
+ *           JSON envelope, exit 0 when no blocking failures remain (or
+ *           --force --reason was supplied), exit 1 otherwise.
+ *
+ * Layer 1 (post-CLI-layering refactor, subtask 10). cmdGate is async and
+ * returns `Promise<{envelope, exitCode}>` — it MUST NOT call process.exit,
+ * output(), or fail() directly. The Layer 2 wrapper (dispatch.mjs `wrap()`)
+ * writes stdout and exits.
+ */
+import { resolve } from 'node:path';
+import { createCoordinationStore } from '../coordination/store.mjs';
+import { buildGateContext } from '../gate/context.mjs';
+import '../gate/gates/index.mjs';
+import { listGates } from '../gate/registry.mjs';
+// Cache module is optional — when present (subtask 4), the check loop reuses
+// prior verdicts keyed on input hashes. The lazy import keeps subtask 3 self
+// contained: the CLI works before cache.mjs lands.
+let cacheModulePromise = null;
+async function loadCache() {
+    if (!cacheModulePromise) {
+        cacheModulePromise = import('../gate/cache.mjs').catch(() => null);
+    }
+    return cacheModulePromise;
+}
+import { parseFlags } from '../util/args.mjs';
+import { err, exitWith, ok } from '../util/result.mjs';
+const BLOCKING_SEVERITIES = new Set(['blocking']);
+export async function cmdGate(subcommand, projectDir, extraArgs) {
+    if (!subcommand)
+        return err('Usage: apt-tools gate <list|check> [project-dir] [flags]');
+    switch (subcommand) {
+        case 'list':
+            return cmdGateList(projectDir, extraArgs ?? []);
+        case 'check':
+            return await cmdGateCheck(projectDir, extraArgs ?? []);
+        default:
+            return err(`Unknown gate subcommand: ${subcommand}. Expected: list, check`);
+    }
+}
+function cmdGateList(projectDir, extraArgs) {
+    // `list` is a pure read; project-dir is tolerated but unused. If the
+    // caller passed `--skill` in the project-dir slot (no explicit dir), we
+    // prepend it back into extraArgs so parseFlags picks it up.
+    const merged = typeof projectDir === 'string' && projectDir.startsWith('--')
+        ? [projectDir, ...(extraArgs ?? [])]
+        : (extraArgs ?? []);
+    const flags = parseFlags(merged);
+    const skill = typeof flags.get('skill') === 'string' ? flags.get('skill') : null;
+    const gates = listGates({ skill });
+    return ok({
+        status: 'ok',
+        command: 'gate-list',
+        skill: skill ?? null,
+        count: gates.length,
+        gates: gates.map((g) => ({
+            id: g.id,
+            description: g.description,
+            severity: g.severity,
+            skills: g.skills,
+        })),
+    });
+}
+async function cmdGateCheck(projectDir, extraArgs) {
+    if (!projectDir)
+        return err('Usage: apt-tools gate check <project-dir> --task-id <id> --skill <skill> [flags]');
+    const absRoot = resolve(projectDir);
+    const flags = parseFlags(extraArgs);
+    const taskId = flags.get('task-id');
+    const skill = flags.get('skill');
+    const force = flags.get('force') === true;
+    const reasonRaw = flags.get('reason');
+    const reason = typeof reasonRaw === 'string' ? reasonRaw : null;
+    if (!taskId || typeof taskId !== 'string')
+        return err('Required: --task-id <id>');
+    if (!skill || typeof skill !== 'string')
+        return err('Required: --skill <skill>');
+    if (force && !reason)
+        return err('--force requires --reason "<explanation>" (the override is logged to the audit trail)');
+    let ctx;
+    try {
+        ctx = buildGateContext(absRoot, taskId);
+    }
+    catch (e) {
+        // Every failure during context build surfaces as the standard envelope,
+        // not a raw exception — the CLI contract is "always emit JSON on
+        // stdout, exit non-zero on failure". ETASKNOTFOUND is the expected
+        // case (bad --task-id); anything else (e.g. unreadable state.json) is
+        // still reported through the same shape so callers don't need two
+        // parsing paths.
+        const reasonMsg = e?.code === 'ETASKNOTFOUND' ? e.message : `context build failed: ${e?.message ?? String(e)}`;
+        return exitWith({
+            status: 'fail',
+            command: 'gate-check',
+            skill,
+            task_id: taskId,
+            failed: [{ id: 'task-context', severity: 'blocking', reason: reasonMsg }],
+            passed: [],
+            warned: [],
+            skipped: [],
+            duration_ms: 0,
+        }, 1);
+    }
+    const gates = listGates({ skill });
+    const startedNs = process.hrtime.bigint();
+    const passed = [];
+    const failed = [];
+    const warned = [];
+    const skipped = [];
+    const forced = [];
+    const cacheHits = [];
+    // Load the persisted cache once. Writes happen incrementally so a crash
+    // mid-run still keeps the verdicts that did complete. When cache.mjs is
+    // not yet present (pre-subtask-4), `cacheMod` is null and every gate runs.
+    const cacheMod = await loadCache();
+    const cache = cacheMod ? cacheMod.readCache(ctx.taskDir) : {};
+    for (const gate of gates) {
+        let verdict;
+        let cached = false;
+        let inputHash = null;
+        // Cache probe — reuse the prior verdict if the inputs it recorded
+        // still hash identically.
+        if (cacheMod) {
+            const prior = cache[gate.id];
+            const priorInputs = prior?.verdict?.inputs;
+            if (prior && Array.isArray(priorInputs)) {
+                const currentHash = cacheMod.computeInputHash(gate.id, priorInputs);
+                if (currentHash === prior.key) {
+                    verdict = prior.verdict;
+                    cached = true;
+                    cacheHits.push(gate.id);
+                }
+            }
+        }
+        if (!verdict) {
+            try {
+                verdict = await gate.check(ctx);
+            }
+            catch (e) {
+                verdict = {
+                    status: 'fail',
+                    reason: `gate ${gate.id} threw: ${e.message}`,
+                };
+            }
+            if (cacheMod && Array.isArray(verdict.inputs) && verdict.inputs.length > 0) {
+                inputHash = cacheMod.computeInputHash(gate.id, verdict.inputs);
+            }
+        }
+        const entry = {
+            id: gate.id,
+            severity: gate.severity,
+            reason: verdict.reason,
+            ...(verdict.evidence ? { evidence: verdict.evidence } : {}),
+            ...(cached ? { cached: true } : {}),
+        };
+        if (verdict.status === 'pass') {
+            passed.push(entry);
+            if (!cached && inputHash && cacheMod)
+                cacheMod.writeCache(ctx.taskDir, gate.id, inputHash, {
+                    status: verdict.status,
+                    reason: verdict.reason,
+                    evidence: verdict.evidence ?? null,
+                    inputs: verdict.inputs ?? [],
+                });
+        }
+        else if (verdict.status === 'warn') {
+            warned.push(entry);
+            if (!cached && inputHash && cacheMod)
+                cacheMod.writeCache(ctx.taskDir, gate.id, inputHash, {
+                    status: verdict.status,
+                    reason: verdict.reason,
+                    evidence: verdict.evidence ?? null,
+                    inputs: verdict.inputs ?? [],
+                });
+        }
+        else if (verdict.status === 'skip') {
+            skipped.push(entry);
+            // Skipped verdicts are always cheap — intentionally not cached.
+        }
+        else if (verdict.status === 'fail') {
+            failed.push(entry);
+            // Cache failures too (unchanged inputs → still failing) but NEVER
+            // cache a forced-through result — force must always re-run the gate
+            // so the event log captures the current state.
+            if (!cached && inputHash && cacheMod && !force)
+                cacheMod.writeCache(ctx.taskDir, gate.id, inputHash, {
+                    status: verdict.status,
+                    reason: verdict.reason,
+                    evidence: verdict.evidence ?? null,
+                    inputs: verdict.inputs ?? [],
+                });
+        }
+        else {
+            failed.push({ ...entry, reason: `unknown verdict status "${verdict.status}"` });
+        }
+    }
+    // Preserve sub-ms precision: convert ns → ms via float division, not
+    // bigint integer division (which would truncate a 142μs check to 0).
+    const duration_ms = Number(process.hrtime.bigint() - startedNs) / 1_000_000;
+    const blockingFailed = failed.filter((f) => BLOCKING_SEVERITIES.has(f.severity));
+    // --force path: append one audit event per blocking failure, annotate envelope.
+    let eventLogFile = null;
+    if (force && blockingFailed.length > 0) {
+        const store = createCoordinationStore(absRoot);
+        for (const f of blockingFailed) {
+            const evt = store.appendEvent({
+                op: 'gate.force-override',
+                task: taskId,
+                data: {
+                    gate_id: f.id,
+                    skill,
+                    severity: f.severity,
+                    reason,
+                    gate_reason: f.reason,
+                },
+            });
+            if (evt?.file)
+                eventLogFile = evt.file;
+            forced.push({ id: f.id, severity: f.severity, reason });
+        }
+    }
+    const envelope = {
+        command: 'gate-check',
+        skill,
+        task_id: taskId,
+        passed: passed.map((p) => p.id),
+        warned: warned.map((w) => ({ id: w.id, reason: w.reason })),
+        skipped: skipped.map((s) => ({ id: s.id, reason: s.reason })),
+        failed: blockingFailed.map((f) => ({ id: f.id, severity: f.severity, reason: f.reason })),
+        duration_ms,
+    };
+    if (cacheHits.length > 0)
+        envelope.cache_hits = cacheHits;
+    if (blockingFailed.length === 0) {
+        envelope.status = 'ok';
+        return ok(envelope);
+    }
+    if (force) {
+        envelope.status = 'ok';
+        envelope.forced = forced;
+        envelope.failed_before_force = envelope.failed;
+        envelope.failed = [];
+        if (eventLogFile)
+            envelope.event_logged = eventLogFile;
+        return ok(envelope);
+    }
+    envelope.status = 'fail';
+    envelope.hint =
+        'Re-run with --force --reason "<explanation>" to override (the bypass will be logged to the audit trail).';
+    return exitWith(envelope, 1);
+}
+//# sourceMappingURL=gate.mjs.map

package/dist/cli/commands/gate.mjs.map

@@ -0,0 +1 @@
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package/dist/cli/commands/health-check.d.mts

@@ -0,0 +1,2 @@
+export function cmdHealthCheck(projectDir: any): import("../util/result.mjs").CommandResult;
+//# sourceMappingURL=health-check.d.mts.map

package/dist/cli/commands/health-check.d.mts.map

@@ -0,0 +1 @@
+{"version":3,"file":"health-check.d.mts","sourceRoot":"","sources":["../../../src/cli/commands/health-check.mjs"],"names":[],"mappings":"AAeA,4FAsJC"}

package/dist/cli/commands/health-check.mjs

@@ -0,0 +1,161 @@
+/**
+ * commands/health-check.mjs — health-check command (C29).
+ */
+import { execSync } from 'node:child_process';
+import { existsSync, readdirSync, readFileSync } from 'node:fs';
+import { dirname, join, resolve } from 'node:path';
+import { fileURLToPath } from 'node:url';
+import { getSharedLockDir } from '../util/project.mjs';
+import { err, ok } from '../util/result.mjs';
+import { readSkillInstallState } from '../util/skill-installs.mjs';
+const __filename = fileURLToPath(import.meta.url);
+const __dirname = dirname(__filename);
+export function cmdHealthCheck(projectDir) {
+    if (!projectDir)
+        return err('Usage: apt-tools health-check <project-dir>');
+    const targetDir = resolve(projectDir);
+    const aperantDir = join(targetDir, '.aperant');
+    const issues = [];
+    // 1. Check for uncommitted changes in working tree
+    let dirtyFiles = [];
+    try {
+        const status = execSync('git status --porcelain 2>/dev/null', {
+            cwd: targetDir,
+            encoding: 'utf-8',
+        }).trim();
+        if (status) {
+            dirtyFiles = status.split('\n').filter(Boolean);
+            if (dirtyFiles.length > 0) {
+                issues.push({
+                    type: 'dirty-workdir',
+                    severity: 'warning',
+                    detail: `${dirtyFiles.length} uncommitted file(s) in working tree`,
+                    files: dirtyFiles.slice(0, 10),
+                });
+            }
+        }
+    }
+    catch {
+        /* no git */
+    }
+    // 2. Check for stale active_task in state.json
+    const statePath = join(aperantDir, 'state.json');
+    if (existsSync(statePath)) {
+        try {
+            const state = JSON.parse(readFileSync(statePath, 'utf-8'));
+            if (state.active_task) {
+                const lastActivity = new Date(state.last_activity);
+                const staleMinutes = (Date.now() - lastActivity.getTime()) / 60000;
+                if (staleMinutes > 30) {
+                    issues.push({
+                        type: 'stale-active-task',
+                        severity: 'warning',
+                        detail: `Active task "${state.active_task.description}" last active ${Math.round(staleMinutes)}m ago`,
+                        task: state.active_task,
+                    });
+                }
+            }
+        }
+        catch {
+            /* malformed state */
+        }
+    }
+    // 3. Check for stale locks
+    const locksDir = getSharedLockDir(targetDir);
+    if (existsSync(locksDir)) {
+        try {
+            const lockFiles = readdirSync(locksDir).filter((f) => f.endsWith('.lock'));
+            for (const lockFile of lockFiles) {
+                const lockPath = join(locksDir, lockFile);
+                const lockData = JSON.parse(readFileSync(lockPath, 'utf-8'));
+                const heartbeat = new Date(lockData.heartbeat);
+                const staleSec = (Date.now() - heartbeat.getTime()) / 1000;
+                let pidAlive = false;
+                try {
+                    process.kill(lockData.worker_pid, 0);
+                    pidAlive = true;
+                }
+                catch {
+                    pidAlive = false;
+                }
+                if (staleSec > lockData.ttl_seconds && !pidAlive) {
+                    issues.push({
+                        type: 'stale-lock',
+                        severity: 'error',
+                        detail: `Stale lock: ${lockFile} (PID ${lockData.worker_pid} dead, heartbeat ${Math.round(staleSec)}s ago)`,
+                        lock_file: lockFile,
+                        lock_data: lockData,
+                    });
+                }
+            }
+        }
+        catch {
+            /* no locks dir */
+        }
+    }
+    // 4. Check for orphaned events (claimed but never completed/failed)
+    const eventsDir = join(aperantDir, 'events');
+    if (existsSync(eventsDir)) {
+        try {
+            const eventFiles = readdirSync(eventsDir)
+                .filter((f) => f.endsWith('.json'))
+                .sort();
+            const claimed = new Map();
+            const resolved = new Set();
+            for (const ef of eventFiles) {
+                const event = JSON.parse(readFileSync(join(eventsDir, ef), 'utf-8'));
+                if (event.type === 'task-claimed')
+                    claimed.set(event.subtask, ef);
+                if (event.type === 'task-completed' || event.type === 'task-failed')
+                    resolved.add(event.subtask);
+            }
+            for (const [subtask, eventFile] of claimed) {
+                if (!resolved.has(subtask)) {
+                    issues.push({
+                        type: 'orphaned-event',
+                        severity: 'warning',
+                        detail: `Subtask "${subtask}" was claimed (${eventFile}) but never completed or failed`,
+                        subtask,
+                    });
+                }
+            }
+        }
+        catch {
+            /* no events */
+        }
+    }
+    // 5. Check skill installs for each supported host surface
+    const pkgPath = resolve(__dirname, '..', '..', '..', 'package.json');
+    if (existsSync(pkgPath)) {
+        const frameworkVersion = JSON.parse(readFileSync(pkgPath, 'utf-8')).version;
+        const installs = readSkillInstallState(targetDir, frameworkVersion);
+        const installed = installs.filter((surface) => surface.installed);
+        const staleInstalls = installed.filter((surface) => surface.stale);
+        if (installed.length === 0) {
+            issues.push({
+                type: 'missing-skills',
+                severity: 'warning',
+                detail: 'No installed skill version stamps found under .claude/skills or .agents/skills',
+                install_surfaces: installs,
+            });
+        }
+        if (staleInstalls.length > 0) {
+            issues.push({
+                type: 'stale-skills',
+                severity: 'warning',
+                detail: `Installed skills differ from framework (${frameworkVersion}) on ${staleInstalls
+                    .map((surface) => surface.host)
+                    .join(', ')}`,
+                install_surfaces: staleInstalls,
+            });
+        }
+    }
+    return ok({
+        status: 'ok',
+        command: 'health-check',
+        healthy: issues.length === 0,
+        issue_count: issues.length,
+        issues,
+    });
+}
+//# sourceMappingURL=health-check.mjs.map

package/dist/cli/commands/health-check.mjs.map

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package/dist/cli/commands/host-detect.d.mts

@@ -0,0 +1,3 @@
+export function cmdHostDetect(): import("../util/result.mjs").CommandResult;
+export function cmdReconcile(projectDir: any): import("../util/result.mjs").CommandResult;
+//# sourceMappingURL=host-detect.d.mts.map

package/dist/cli/commands/host-detect.d.mts.map

@@ -0,0 +1 @@
+{"version":3,"file":"host-detect.d.mts","sourceRoot":"","sources":["../../../src/cli/commands/host-detect.mjs"],"names":[],"mappings":"AAeA,4EAOC;AAED,0FA8DC"}