@alisio/plugin-thesis 0.1.0

package/dist/coordinator.js.map

@@ -0,0 +1 @@
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package/dist/delegate.d.ts

@@ -0,0 +1,34 @@
+import type { ChildSessionSpec, PluginAPI } from "@alisio/sdk";
+import { type Validated } from "./schemas.js";
+/** Host web tools the librarian may use when they exist; their absence is never an error. */
+export declare const librarianTools: string[];
+type Profile = Pick<ChildSessionSpec, "agent" | "readOnly" | "permission" | "tools" | "maxTurns" | "timeoutMs" | "maxOutputTokens">;
+/** Spec 5.3: read-only children, 8 to 20 turns, 180 s (librarian 300 s), 6000 output tokens. */
+export declare const childProfiles: {
+    readonly "thesis-methodologist": Profile;
+    readonly "thesis-architect": Profile;
+    readonly "thesis-librarian": Profile;
+    readonly "thesis-evidence-auditor": Profile;
+    readonly "thesis-writer": Profile;
+    readonly "thesis-editor": Profile;
+    readonly "thesis-reviewer": Profile;
+};
+export type DelegatedRole = keyof typeof childProfiles;
+/** A child was asked twice and still returned an envelope that fails validation. */
+export declare class ChildRejectedError extends Error {
+    readonly role: string;
+    readonly errors: string[];
+    constructor(role: string, errors: string[]);
+}
+export declare class Delegator {
+    private readonly api;
+    constructor(api: PluginAPI);
+    private once;
+    /**
+     * Run a child and validate its envelope. A malformed or invalid reply is retried once with the
+     * validation errors in the prompt; a second failure throws ChildRejectedError.
+     */
+    run<T>(role: DelegatedRole, parentId: string, workspace: string, title: string, prompt: string, validate: (value: unknown) => Validated<T>): Promise<T>;
+}
+export {};
+//# sourceMappingURL=delegate.d.ts.map

package/dist/delegate.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"delegate.d.ts","sourceRoot":"","sources":["../src/delegate.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,gBAAgB,EAAE,SAAS,EAAE,MAAM,aAAa,CAAC;AAE/D,OAAO,EAAkB,KAAK,SAAS,EAAE,MAAM,cAAc,CAAC;AAM9D,6FAA6F;AAC7F,eAAO,MAAM,cAAc,UAQ1B,CAAC;AAEF,KAAK,OAAO,GAAG,IAAI,CACjB,gBAAgB,EAChB,OAAO,GAAG,UAAU,GAAG,YAAY,GAAG,OAAO,GAAG,UAAU,GAAG,WAAW,GAAG,iBAAiB,CAC7F,CAAC;AAkBF,gGAAgG;AAChG,eAAO,MAAM,aAAa;;;;;;;;CAciC,CAAC;AAC5D,MAAM,MAAM,aAAa,GAAG,MAAM,OAAO,aAAa,CAAC;AAEvD,oFAAoF;AACpF,qBAAa,kBAAmB,SAAQ,KAAK;IAEzC,QAAQ,CAAC,IAAI,EAAE,MAAM;IACrB,QAAQ,CAAC,MAAM,EAAE,MAAM,EAAE;IAF3B,YACW,IAAI,EAAE,MAAM,EACZ,MAAM,EAAE,MAAM,EAAE,EAI1B;CACF;AAED,qBAAa,SAAS;IACR,OAAO,CAAC,QAAQ,CAAC,GAAG;IAAhC,YAA6B,GAAG,EAAE,SAAS,EAAI;YAEjC,IAAI;IA4BlB;;;OAGG;IACG,GAAG,CAAC,CAAC,EACT,IAAI,EAAE,aAAa,EACnB,QAAQ,EAAE,MAAM,EAChB,SAAS,EAAE,MAAM,EACjB,KAAK,EAAE,MAAM,EACb,MAAM,EAAE,MAAM,EACd,QAAQ,EAAE,CAAC,KAAK,EAAE,OAAO,KAAK,SAAS,CAAC,CAAC,CAAC,GACzC,OAAO,CAAC,CAAC,CAAC,CAoBZ;CACF"}

package/dist/delegate.js

@@ -0,0 +1,105 @@
+import { loadRoleInstructions } from "./resources.js";
+import { parseChildJson } from "./schemas.js";
+const readTools = ["read_file", "list_files", "search_text"];
+const delegationTools = ["task", "delegate", "subagent", "sessions_create"];
+/** Host web tools the librarian may use when they exist; their absence is never an error. */
+export const librarianTools = [
+    "thesis_scholar_search",
+    "thesis_scholar_resolve",
+    "web_search",
+    "web_fetch",
+    "brave_web_search",
+    "brave_llm_context",
+    "brave_summarizer",
+];
+const profile = (agent, maxTurns, allow, timeoutMs = 180_000, maxOutputTokens = 6000) => ({
+    agent,
+    readOnly: true,
+    permission: { write: "deny", process: "deny" },
+    tools: { allow, deny: delegationTools },
+    maxTurns,
+    timeoutMs,
+    maxOutputTokens,
+});
+/** Spec 5.3: read-only children, 8 to 20 turns, 180 s (librarian 300 s), 6000 output tokens. */
+export const childProfiles = {
+    "thesis-methodologist": profile("Thesis Methodologist", 12, readTools),
+    "thesis-architect": profile("Thesis Architect", 12, readTools),
+    "thesis-librarian": profile("Thesis Librarian", 20, [...readTools, ...librarianTools], 300_000),
+    "thesis-evidence-auditor": profile("Thesis Evidence Auditor", 14, [
+        ...readTools,
+        "thesis_scholar_resolve",
+    ]),
+    // The writer returns whole sections: a larger output budget (spec 5.3).
+    "thesis-writer": profile("Thesis Writer", 16, readTools, 180_000, 12_000),
+    // The editor may fetch an institutional guide by URL when the host offers a web tool.
+    "thesis-editor": profile("Thesis Editor", 14, [...readTools, "web_fetch"], 180_000, 12_000),
+    // The reviewer sees the built artifacts and the deterministic check report only.
+    "thesis-reviewer": profile("Thesis Reviewer", 16, [...readTools, "thesis_check"]),
+};
+/** A child was asked twice and still returned an envelope that fails validation. */
+export class ChildRejectedError extends Error {
+    role;
+    errors;
+    constructor(role, errors) {
+        super(`${role} returned an invalid envelope: ${errors.join("; ")}`);
+        this.role = role;
+        this.errors = errors;
+        this.name = "ChildRejectedError";
+    }
+}
+export class Delegator {
+    api;
+    constructor(api) {
+        this.api = api;
+    }
+    async once(role, parentId, workspace, title, prompt) {
+        const instructions = await loadRoleInstructions(role);
+        const child = await this.api.sessions.create({
+            parentId,
+            workspace,
+            title,
+            instructions,
+            ...childProfiles[role],
+        });
+        this.api.ui.status("phase", `${role}: running`, title);
+        try {
+            const result = await this.api.sessions.run(child.id, prompt);
+            if (result.turnsExceeded)
+                throw new Error(`${role} exceeded its turn limit; partial output rejected`);
+            if (result.status !== "completed")
+                throw new Error(result.error || `${role} child ended with ${result.status}`);
+            return result.text;
+        }
+        finally {
+            this.api.ui.status("phase", undefined);
+        }
+    }
+    /**
+     * Run a child and validate its envelope. A malformed or invalid reply is retried once with the
+     * validation errors in the prompt; a second failure throws ChildRejectedError.
+     */
+    async run(role, parentId, workspace, title, prompt, validate) {
+        let errors = [];
+        for (const attempt of [1, 2]) {
+            const sent = attempt === 1
+                ? prompt
+                : `${prompt}\n\nYour previous reply was rejected:\n${errors.map((error) => `- ${error}`).join("\n")}\nReturn the complete corrected JSON object only.`;
+            const reply = await this.once(role, parentId, workspace, title, sent);
+            let parsed;
+            try {
+                parsed = parseChildJson(reply);
+            }
+            catch (error) {
+                errors = [error.message];
+                continue;
+            }
+            const checked = validate(parsed);
+            if (checked.value !== undefined)
+                return checked.value;
+            errors = checked.errors.slice(0, 20);
+        }
+        throw new ChildRejectedError(role, errors);
+    }
+}
+//# sourceMappingURL=delegate.js.map

package/dist/delegate.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"delegate.js","sourceRoot":"","sources":["../src/delegate.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,oBAAoB,EAAE,MAAM,gBAAgB,CAAC;AACtD,OAAO,EAAE,cAAc,EAAkB,MAAM,cAAc,CAAC;AAG9D,MAAM,SAAS,GAAG,CAAC,WAAW,EAAE,YAAY,EAAE,aAAa,CAAC,CAAC;AAC7D,MAAM,eAAe,GAAG,CAAC,MAAM,EAAE,UAAU,EAAE,UAAU,EAAE,iBAAiB,CAAC,CAAC;AAE5E,6FAA6F;AAC7F,MAAM,CAAC,MAAM,cAAc,GAAG;IAC5B,uBAAuB;IACvB,wBAAwB;IACxB,YAAY;IACZ,WAAW;IACX,kBAAkB;IAClB,mBAAmB;IACnB,kBAAkB;CACnB,CAAC;AAOF,MAAM,OAAO,GAAG,CACd,KAAa,EACb,QAAgB,EAChB,KAAe,EACf,SAAS,GAAG,OAAO,EACnB,eAAe,GAAG,IAAI,EACb,EAAE,CAAC,CAAC;IACb,KAAK;IACL,QAAQ,EAAE,IAAI;IACd,UAAU,EAAE,EAAE,KAAK,EAAE,MAAM,EAAE,OAAO,EAAE,MAAM,EAAE;IAC9C,KAAK,EAAE,EAAE,KAAK,EAAE,IAAI,EAAE,eAAe,EAAE;IACvC,QAAQ;IACR,SAAS;IACT,eAAe;CAChB,CAAC,CAAC;AAEH,gGAAgG;AAChG,MAAM,CAAC,MAAM,aAAa,GAAG;IAC3B,sBAAsB,EAAE,OAAO,CAAC,sBAAsB,EAAE,EAAE,EAAE,SAAS,CAAC;IACtE,kBAAkB,EAAE,OAAO,CAAC,kBAAkB,EAAE,EAAE,EAAE,SAAS,CAAC;IAC9D,kBAAkB,EAAE,OAAO,CAAC,kBAAkB,EAAE,EAAE,EAAE,CAAC,GAAG,SAAS,EAAE,GAAG,cAAc,CAAC,EAAE,OAAO,CAAC;IAC/F,yBAAyB,EAAE,OAAO,CAAC,yBAAyB,EAAE,EAAE,EAAE;QAChE,GAAG,SAAS;QACZ,wBAAwB;KACzB,CAAC;IACF,wEAAwE;IACxE,eAAe,EAAE,OAAO,CAAC,eAAe,EAAE,EAAE,EAAE,SAAS,EAAE,OAAO,EAAE,MAAM,CAAC;IACzE,sFAAsF;IACtF,eAAe,EAAE,OAAO,CAAC,eAAe,EAAE,EAAE,EAAE,CAAC,GAAG,SAAS,EAAE,WAAW,CAAC,EAAE,OAAO,EAAE,MAAM,CAAC;IAC3F,iFAAiF;IACjF,iBAAiB,EAAE,OAAO,CAAC,iBAAiB,EAAE,EAAE,EAAE,CAAC,GAAG,SAAS,EAAE,cAAc,CAAC,CAAC;CACxB,CAAC;AAG5D,oFAAoF;AACpF,MAAM,OAAO,kBAAmB,SAAQ,KAAK;IAEhC,IAAI;IACJ,MAAM;IAFjB,YACW,IAAY,EACZ,MAAgB;QAEzB,KAAK,CAAC,GAAG,IAAI,kCAAkC,MAAM,CAAC,IAAI,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;oBAH3D,IAAI;sBACJ,MAAM;QAGf,IAAI,CAAC,IAAI,GAAG,oBAAoB,CAAC;IACnC,CAAC;CACF;AAED,MAAM,OAAO,SAAS;IACS,GAAG;IAAhC,YAA6B,GAAc;mBAAd,GAAG;IAAc,CAAC;IAEvC,KAAK,CAAC,IAAI,CAChB,IAAmB,EACnB,QAAgB,EAChB,SAAiB,EACjB,KAAa,EACb,MAAc;QAEd,MAAM,YAAY,GAAG,MAAM,oBAAoB,CAAC,IAAI,CAAC,CAAC;QACtD,MAAM,KAAK,GAAG,MAAM,IAAI,CAAC,GAAG,CAAC,QAAQ,CAAC,MAAM,CAAC;YAC3C,QAAQ;YACR,SAAS;YACT,KAAK;YACL,YAAY;YACZ,GAAG,aAAa,CAAC,IAAI,CAAC;SACvB,CAAC,CAAC;QACH,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,MAAM,CAAC,OAAO,EAAE,GAAG,IAAI,WAAW,EAAE,KAAK,CAAC,CAAC;QACvD,IAAI,CAAC;YACH,MAAM,MAAM,GAAG,MAAM,IAAI,CAAC,GAAG,CAAC,QAAQ,CAAC,GAAG,CAAC,KAAK,CAAC,EAAE,EAAE,MAAM,CAAC,CAAC;YAC7D,IAAI,MAAM,CAAC,aAAa;gBACtB,MAAM,IAAI,KAAK,CAAC,GAAG,IAAI,mDAAmD,CAAC,CAAC;YAC9E,IAAI,MAAM,CAAC,MAAM,KAAK,WAAW;gBAC/B,MAAM,IAAI,KAAK,CAAC,MAAM,CAAC,KAAK,IAAI,GAAG,IAAI,qBAAqB,MAAM,CAAC,MAAM,EAAE,CAAC,CAAC;YAC/E,OAAO,MAAM,CAAC,IAAI,CAAC;QACrB,CAAC;gBAAS,CAAC;YACT,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,MAAM,CAAC,OAAO,EAAE,SAAS,CAAC,CAAC;QACzC,CAAC;IACH,CAAC;IAED;;;OAGG;IACH,KAAK,CAAC,GAAG,CACP,IAAmB,EACnB,QAAgB,EAChB,SAAiB,EACjB,KAAa,EACb,MAAc,EACd,QAA0C;QAE1C,IAAI,MAAM,GAAa,EAAE,CAAC;QAC1B,KAAK,MAAM,OAAO,IAAI,CAAC,CAAC,EAAE,CAAC,CAAC,EAAE,CAAC;YAC7B,MAAM,IAAI,GACR,OAAO,KAAK,CAAC;gBACX,CAAC,CAAC,MAAM;gBACR,CAAC,CAAC,GAAG,MAAM,0CAA0C,MAAM,CAAC,GAAG,CAAC,CAAC,KAAK,EAAE,EAAE,CAAC,KAAK,KAAK,EAAE,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,mDAAmD,CAAC;YAC3J,MAAM,KAAK,GAAG,MAAM,IAAI,CAAC,IAAI,CAAC,IAAI,EAAE,QAAQ,EAAE,SAAS,EAAE,KAAK,EAAE,IAAI,CAAC,CAAC;YACtE,IAAI,MAAe,CAAC;YACpB,IAAI,CAAC;gBACH,MAAM,GAAG,cAAc,CAAC,KAAK,CAAC,CAAC;YACjC,CAAC;YAAC,OAAO,KAAK,EAAE,CAAC;gBACf,MAAM,GAAG,CAAE,KAAe,CAAC,OAAO,CAAC,CAAC;gBACpC,SAAS;YACX,CAAC;YACD,MAAM,OAAO,GAAG,QAAQ,CAAC,MAAM,CAAC,CAAC;YACjC,IAAI,OAAO,CAAC,KAAK,KAAK,SAAS;gBAAE,OAAO,OAAO,CAAC,KAAK,CAAC;YACtD,MAAM,GAAG,OAAO,CAAC,MAAM,CAAC,KAAK,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC;QACvC,CAAC;QACD,MAAM,IAAI,kBAAkB,CAAC,IAAI,EAAE,MAAM,CAAC,CAAC;IAC7C,CAAC;CACF"}

package/dist/diffguard.d.ts

@@ -0,0 +1,24 @@
+/**
+ * The editor's diff guard (spec 7.4): an edit pass may rewrite wording but must leave citations,
+ * claim anchors, numbers, labels, math, link targets and footnote marks exactly as they were. The
+ * comparison is on the Markdown text, before and after; any difference rejects the whole pass.
+ */
+export interface ProtectedItems {
+    /** `[@a; @b]`, `@key` and `@fig-x` occurrences. */
+    citations: string[];
+    /** Claim anchor ids in order. */
+    anchors: string[];
+    numbers: string[];
+    /** `{#fig-x width=80%}` attribute blocks. */
+    labels: string[];
+    /** Math sources in order (display and inline). */
+    math: string[];
+    /** Link and image targets. */
+    targets: string[];
+    /** Footnote marks and definitions. */
+    footnotes: string[];
+}
+export declare function protectedItems(markdown: string): ProtectedItems;
+/** Human-readable violations; empty when nothing protected changed. */
+export declare function diffProtected(before: string, after: string): string[];
+//# sourceMappingURL=diffguard.d.ts.map

package/dist/diffguard.d.ts.map

@@ -0,0 +1 @@
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package/dist/diffguard.js

@@ -0,0 +1,92 @@
+/**
+ * The editor's diff guard (spec 7.4): an edit pass may rewrite wording but must leave citations,
+ * claim anchors, numbers, labels, math, link targets and footnote marks exactly as they were. The
+ * comparison is on the Markdown text, before and after; any difference rejects the whole pass.
+ */
+const anchorPattern = /<!--\s*claim:([A-Za-z0-9_-]{1,40})\s*-->/g;
+const displayMath = /\$\$[\s\S]*?\$\$/g;
+const inlineMath = /(?<![\\$])\$(?![\s$])(?:[^$\n\\]|\\.)+?(?<![\s\\])\$(?!\d)/g;
+const citationPattern = /\[@[^\]]*\]|(?<![\p{L}\p{N}_])@[A-Za-z0-9_][A-Za-z0-9_:.-]*/gu;
+const labelPattern = /\{#[^}]*\}/g;
+const targetPattern = /\]\(([^)\s]*)/g;
+const footnotePattern = /\[\^[^\]\s]+\]/g;
+const numberPattern = /\d+(?:[.,]\d+)*/g;
+const squash = (value) => value.replace(/\s+/g, " ").trim();
+const sorted = (values) => [...values].sort();
+export function protectedItems(markdown) {
+    const anchors = [...markdown.matchAll(anchorPattern)].map((match) => match[1]);
+    let rest = markdown.replace(anchorPattern, " ");
+    const math = [];
+    rest = rest.replace(displayMath, (match) => {
+        math.push(squash(match));
+        return " ";
+    });
+    rest = rest.replace(inlineMath, (match) => {
+        math.push(squash(match));
+        return " ";
+    });
+    const citations = (rest.match(citationPattern) ?? []).map((entry) => entry.startsWith("[") ? squash(entry) : entry.replace(/[.:-]+$/, ""));
+    const labels = (rest.match(labelPattern) ?? []).map(squash);
+    const targets = [...rest.matchAll(targetPattern)].map((match) => match[1]);
+    const footnotes = rest.match(footnotePattern) ?? [];
+    const prose = rest
+        .replace(citationPattern, " ")
+        .replace(labelPattern, " ")
+        .replace(targetPattern, "] ")
+        .replace(footnotePattern, " ");
+    const numbers = prose.match(numberPattern) ?? [];
+    return { citations, anchors, numbers, labels, math, targets, footnotes };
+}
+function multisetDiff(before, after) {
+    const counts = new Map();
+    for (const item of before)
+        counts.set(item, (counts.get(item) ?? 0) + 1);
+    const added = [];
+    for (const item of after) {
+        const left = counts.get(item) ?? 0;
+        if (left > 0)
+            counts.set(item, left - 1);
+        else
+            added.push(item);
+    }
+    const removed = [];
+    for (const [item, count] of counts)
+        for (let index = 0; index < count; index += 1)
+            removed.push(item);
+    return { removed, added };
+}
+const shown = (items) => items
+    .slice(0, 4)
+    .map((item) => JSON.stringify(item.length > 50 ? `${item.slice(0, 50)}...` : item))
+    .join(", ") + (items.length > 4 ? ", ..." : "");
+/** Human-readable violations; empty when nothing protected changed. */
+export function diffProtected(before, after) {
+    const a = protectedItems(before);
+    const b = protectedItems(after);
+    const violations = [];
+    const unordered = [
+        ["citations", "citations or cross-references"],
+        ["numbers", "numbers"],
+        ["labels", "labels"],
+        ["targets", "link or image targets"],
+        ["footnotes", "footnote marks"],
+    ];
+    for (const [key, name] of unordered) {
+        const { removed, added } = multisetDiff(sorted(a[key]), sorted(b[key]));
+        if (removed.length === 0 && added.length === 0)
+            continue;
+        violations.push(`The edit changed ${name}${removed.length ? `; removed ${shown(removed)}` : ""}${added.length ? `; added ${shown(added)}` : ""}`);
+    }
+    const ordered = [
+        ["anchors", "claim anchors"],
+        ["math", "math"],
+    ];
+    for (const [key, name] of ordered) {
+        if (a[key].length === b[key].length && a[key].every((item, index) => item === b[key][index]))
+            continue;
+        const { removed, added } = multisetDiff(a[key], b[key]);
+        violations.push(`The edit changed ${name}${removed.length ? `; removed ${shown(removed)}` : ""}${added.length ? `; added ${shown(added)}` : ""}${removed.length === 0 && added.length === 0 ? "; the order changed" : ""}`);
+    }
+    return violations;
+}
+//# sourceMappingURL=diffguard.js.map

package/dist/diffguard.js.map

@@ -0,0 +1 @@
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package/dist/doctor.d.ts

@@ -0,0 +1,34 @@
+import { type ChromeDetection } from "./chrome/detect.js";
+export declare const vendoredPackages: readonly [{
+    readonly name: "mitex";
+    readonly version: "0.2.7";
+}, {
+    readonly name: "merman";
+    readonly version: "0.3.0";
+}];
+export interface DoctorItem {
+    id: string;
+    label: string;
+    status: "ok" | "warn" | "missing";
+    detail: string;
+}
+export interface DoctorReport {
+    items: DoctorItem[];
+    /** True when a Typst engine or a Chrome fallback is available. */
+    engineAvailable: boolean;
+}
+export interface DoctorDeps {
+    env: NodeJS.ProcessEnv;
+    nodeVersion: string;
+    exec(command: string, args: string[]): Promise<string>;
+    exists(path: string): boolean;
+    detectChrome(): Promise<ChromeDetection>;
+    listCountries(): Promise<string[]>;
+    packagePath(...segments: string[]): string;
+    /** Engine cache root (where /thesis:setup installs Typst). */
+    cacheRoot?: string;
+}
+export { parseTypstVersion, requiredTypst, typstVersionOk, } from "./render/adapters/typst-pdf/version.js";
+export declare function runDoctor(overrides?: Partial<DoctorDeps>): Promise<DoctorReport>;
+export declare function formatDoctor(report: DoctorReport): string;
+//# sourceMappingURL=doctor.d.ts.map

package/dist/doctor.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"doctor.d.ts","sourceRoot":"","sources":["../src/doctor.ts"],"names":[],"mappings":"AAMA,OAAO,EAAE,KAAK,eAAe,EAAgB,MAAM,oBAAoB,CAAC;AAOxE,eAAO,MAAM,gBAAgB;aACzB,IAAI,EAAE,OAAO;aAAE,OAAO,EAAE,OAAO;;aAC/B,IAAI,EAAE,QAAQ;aAAE,OAAO,EAAE,OAAO;EAC1B,CAAC;AAEX,MAAM,WAAW,UAAU;IACzB,EAAE,EAAE,MAAM,CAAC;IACX,KAAK,EAAE,MAAM,CAAC;IACd,MAAM,EAAE,IAAI,GAAG,MAAM,GAAG,SAAS,CAAC;IAClC,MAAM,EAAE,MAAM,CAAC;CAChB;AAED,MAAM,WAAW,YAAY;IAC3B,KAAK,EAAE,UAAU,EAAE,CAAC;IACpB,kEAAkE;IAClE,eAAe,EAAE,OAAO,CAAC;CAC1B;AAED,MAAM,WAAW,UAAU;IACzB,GAAG,EAAE,MAAM,CAAC,UAAU,CAAC;IACvB,WAAW,EAAE,MAAM,CAAC;IACpB,IAAI,CAAC,OAAO,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,EAAE,GAAG,OAAO,CAAC,MAAM,CAAC,CAAC;IACvD,MAAM,CAAC,IAAI,EAAE,MAAM,GAAG,OAAO,CAAC;IAC9B,YAAY,IAAI,OAAO,CAAC,eAAe,CAAC,CAAC;IACzC,aAAa,IAAI,OAAO,CAAC,MAAM,EAAE,CAAC,CAAC;IACnC,WAAW,CAAC,GAAG,QAAQ,EAAE,MAAM,EAAE,GAAG,MAAM,CAAC;IAC3C,8DAA8D;IAC9D,SAAS,CAAC,EAAE,MAAM,CAAC;CACpB;AAwBD,OAAO,EACL,iBAAiB,EACjB,aAAa,EACb,cAAc,GACf,MAAM,wCAAwC,CAAC;AAqDhD,wBAAsB,SAAS,CAAC,SAAS,GAAE,OAAO,CAAC,UAAU,CAAM,GAAG,OAAO,CAAC,YAAY,CAAC,CA6D1F;AAED,wBAAgB,YAAY,CAAC,MAAM,EAAE,YAAY,GAAG,MAAM,CAWzD"}

package/dist/doctor.js

@@ -0,0 +1,155 @@
+import { execFile } from "node:child_process";
+import { existsSync } from "node:fs";
+import { readdir } from "node:fs/promises";
+import { join } from "node:path";
+import { promisify } from "node:util";
+import { typstInstallDir } from "./cache.js";
+import { detectChrome } from "./chrome/detect.js";
+import { packagePath } from "./package-paths.js";
+import { parseTypstVersion, typstVersionOk } from "./render/adapters/typst-pdf/version.js";
+import { typstPins, typstVersion } from "./typst-pins.js";
+const execFileAsync = promisify(execFile);
+export const vendoredPackages = [
+    { name: "mitex", version: "0.2.7" },
+    { name: "merman", version: "0.3.0" },
+];
+const defaults = () => ({
+    env: process.env,
+    nodeVersion: process.versions.node,
+    async exec(command, args) {
+        const { stdout } = await execFileAsync(command, args, { encoding: "utf8", timeout: 5000 });
+        return stdout;
+    },
+    exists: existsSync,
+    detectChrome: () => detectChrome(),
+    async listCountries() {
+        try {
+            return (await readdir(packagePath("policy-packs", "countries"), { withFileTypes: true }))
+                .filter((entry) => entry.isDirectory())
+                .map((entry) => entry.name)
+                .sort();
+        }
+        catch {
+            return [];
+        }
+    },
+    packagePath,
+});
+export { parseTypstVersion, requiredTypst, typstVersionOk, } from "./render/adapters/typst-pdf/version.js";
+async function typstItem(deps) {
+    const fromEnv = deps.env.ALISIO_THESIS_TYPST;
+    let command = fromEnv || "typst";
+    let where = fromEnv ? "ALISIO_THESIS_TYPST" : "PATH";
+    if (!fromEnv && deps.cacheRoot) {
+        // Resolution order: PATH first, then the binary installed by /thesis:setup.
+        try {
+            await deps.exec(command, ["--version"]);
+        }
+        catch {
+            const pin = typstPins[`${process.platform}-${process.arch}`];
+            const cached = pin
+                ? join(typstInstallDir(deps.cacheRoot, typstVersion), pin.executable)
+                : undefined;
+            if (cached && deps.exists(cached)) {
+                command = cached;
+                where = "the setup cache";
+            }
+        }
+    }
+    try {
+        const output = await deps.exec(command, ["--version"]);
+        const version = parseTypstVersion(output);
+        if (!version) {
+            return {
+                id: "typst",
+                label: "Typst",
+                status: "warn",
+                detail: `Found via ${where} but the version could not be read`,
+            };
+        }
+        const text = version.join(".");
+        return typstVersionOk(version)
+            ? { id: "typst", label: "Typst", status: "ok", detail: `${text} via ${where}` }
+            : {
+                id: "typst",
+                label: "Typst",
+                status: "warn",
+                detail: `${text} via ${where} is older than the required 0.15.0`,
+            };
+    }
+    catch {
+        return {
+            id: "typst",
+            label: "Typst",
+            status: "missing",
+            detail: fromEnv
+                ? "ALISIO_THESIS_TYPST is set but the binary could not be run"
+                : "Not on PATH or in the setup cache. Run /thesis:setup, or set ALISIO_THESIS_TYPST to a Typst 0.15 binary",
+        };
+    }
+}
+export async function runDoctor(overrides = {}) {
+    const deps = { ...defaults(), ...overrides };
+    const items = [];
+    const [major = 0, minor = 0] = deps.nodeVersion.split(".").map(Number);
+    items.push({
+        id: "node",
+        label: "Node.js",
+        status: major > 22 || (major === 22 && minor >= 16) ? "ok" : "warn",
+        detail: `${deps.nodeVersion} (requires >=22.16)`,
+    });
+    const typst = await typstItem(deps);
+    items.push(typst);
+    const chrome = await deps.detectChrome();
+    items.push(chrome.browser
+        ? {
+            id: "chrome",
+            label: "Chrome-family browser",
+            status: "ok",
+            detail: `Found (${chrome.source}); used as the PDF fallback when no Typst engine is available`,
+        }
+        : {
+            id: "chrome",
+            label: "Chrome-family browser",
+            status: "missing",
+            detail: "Not found; optional PDF fallback (the HTML preview needs no browser)",
+        });
+    for (const { name, version } of vendoredPackages) {
+        const present = deps.exists(deps.packagePath("typst-packages", "preview", name, version));
+        items.push({
+            id: `typst-package-${name}`,
+            label: `Vendored Typst package ${name} ${version}`,
+            status: present ? "ok" : "missing",
+            detail: present ? "Present" : "Missing from the package",
+        });
+    }
+    const globalPack = deps.exists(deps.packagePath("policy-packs", "global", "manifest.yaml"));
+    const countries = await deps.listCountries();
+    items.push({
+        id: "policy-packs",
+        label: "Policy packs",
+        status: globalPack ? "ok" : "missing",
+        detail: globalPack
+            ? `global${countries.length ? ` + ${countries.join(", ")}` : " (no country packs yet)"}`
+            : "The global pack is missing from the package",
+    });
+    const palettes = deps.exists(deps.packagePath("templates", "palettes.json"));
+    items.push({
+        id: "palettes",
+        label: "Chart palettes",
+        status: palettes ? "ok" : "missing",
+        detail: palettes ? "templates/palettes.json present" : "templates/palettes.json is missing",
+    });
+    return { items, engineAvailable: typst.status === "ok" || chrome.browser !== null };
+}
+export function formatDoctor(report) {
+    const lines = ["Thesis Studio doctor (report only; nothing was changed)"];
+    for (const item of report.items) {
+        lines.push(`${item.status.toUpperCase().padEnd(7)} ${item.label}: ${item.detail}`);
+    }
+    lines.push(report.engineAvailable
+        ? "A PDF engine is available."
+        : "No PDF engine is available. Run /thesis:setup to install the pinned Typst.");
+    return lines.join("\n");
+}
+//# sourceMappingURL=doctor.js.map

package/dist/doctor.js.map

@@ -0,0 +1 @@
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package/dist/draft.d.ts

@@ -0,0 +1,64 @@
+import { type Loaded, type WorkflowContext } from "./context.js";
+import { type OutlineDocument } from "./outline.js";
+import type { ResearchFlow } from "./research/flow.js";
+import { type FigureDraft } from "./schemas.js";
+import { type SectionPlan } from "./sections.js";
+export declare function headingOf(plan: SectionPlan): string;
+export declare function composeFile(plan: SectionPlan, body: string, keywords: readonly string[]): string;
+/** The inverse of composeFile: the body and keywords of a chapter written by this plugin. */
+export declare function splitChapter(plan: SectionPlan, text: string): {
+    body: string;
+    keywords: string[];
+};
+export declare function figureAsset(figure: FigureDraft): {
+    path: string;
+    content: string;
+} | undefined;
+/** The Markdown that places a figure or table in a chapter. */
+export declare function figureSnippet(figure: FigureDraft): string;
+/** Replace the figure markers of a draft with the figures' Markdown; problems come back as errors. */
+export declare function placeFigures(markdown: string, figures: readonly FigureDraft[]): {
+    body: string;
+    errors: string[];
+};
+export interface DraftOptions {
+    /** Revise the existing draft with this feedback (the user's, or a routed review finding). */
+    feedback?: string;
+}
+export declare class DraftFlow {
+    private readonly context;
+    private readonly research;
+    private readonly afterChange;
+    constructor(context: WorkflowContext, research: ResearchFlow, afterChange: (loaded: Loaded) => Promise<void>);
+    private get now();
+    outlineOf(loaded: Loaded): OutlineDocument | undefined;
+    plansOf(loaded: Loaded): Map<string, SectionPlan>;
+    /** What a section waits for before it can be drafted: its dependencies, or everything for an abstract. */
+    draftDependencies(state: Loaded["state"], id: string): string[];
+    /** Can this section be drafted now, as far as its own status goes? */
+    private ready;
+    /** First section ready to draft whose dependencies are approved, in document order. */
+    pickDraftable(state: Loaded["state"]): string | undefined;
+    /** Errors of the candidate project that belong to one section's files. */
+    private sectionErrors;
+    /** A copy of the loaded project as it would be with this chapter, its claims and its charts. */
+    private candidate;
+    /** Everything that makes a candidate chapter unacceptable, as messages for the writer or editor. */
+    private assess;
+    run(workspace: string, sessionId: string, target: string, options?: DraftOptions): Promise<string>;
+    private packet;
+    private writerPrompt;
+    private writer;
+    private editor;
+    /** Edit the wording of a drafted section (a `wording` review finding routes here). */
+    editWording(workspace: string, sessionId: string, id: string, feedback: string): Promise<string>;
+    private write;
+    /** Section findings, errors first, for the approval prompt. */
+    private summary;
+    present(loaded: Loaded, id: string): Promise<string>;
+    /** Approve a drafted section, then build the approved sections (fail-open). */
+    approve(workspace: string, sessionId: string, id: string): Promise<string>;
+    /** The partial build after an approval. A missing engine is reported, never fatal. */
+    private partialBuild;
+}
+//# sourceMappingURL=draft.d.ts.map