@aleph-ai/tinyaleph 1.4.4 → 1.5.2

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Files changed (68) hide show
  1. package/backends/bioinformatics/binding.js +44 -52
  2. package/backends/bioinformatics/dna-computing.js +14 -23
  3. package/backends/bioinformatics/encoding.js +22 -30
  4. package/backends/bioinformatics/folding.js +24 -32
  5. package/backends/bioinformatics/genetic-code.js +17 -21
  6. package/backends/bioinformatics/index.js +12 -12
  7. package/backends/bioinformatics/transcription.js +5 -3
  8. package/backends/bioinformatics/translation.js +6 -4
  9. package/backends/cryptographic/index.js +10 -9
  10. package/backends/index.js +7 -6
  11. package/backends/interface.js +4 -1
  12. package/backends/scientific/index.js +7 -4
  13. package/backends/semantic/index.js +7 -4
  14. package/backends/semantic/surface.js +2 -1
  15. package/backends/semantic/two-layer.js +5 -3
  16. package/core/beacon.js +10 -9
  17. package/core/compound.js +4 -4
  18. package/core/crt-homology.js +40 -13
  19. package/core/enochian-vocabulary.js +5 -17
  20. package/core/enochian.js +3 -2
  21. package/core/entanglement.js +7 -7
  22. package/core/errors.js +2 -10
  23. package/core/events.js +7 -6
  24. package/core/fano.js +7 -6
  25. package/core/hilbert.js +40 -34
  26. package/core/hypercomplex.js +4 -2
  27. package/core/index.js +42 -80
  28. package/core/inference.js +6 -6
  29. package/core/lambda.js +5 -18
  30. package/core/llm.js +1 -1
  31. package/core/logger.js +3 -4
  32. package/core/prime.js +26 -1
  33. package/core/quaternion-semantics.js +3 -3
  34. package/core/reduction.js +5 -21
  35. package/core/resonance.js +20 -6
  36. package/core/rformer-crt.js +15 -29
  37. package/core/rformer-layers.js +12 -14
  38. package/core/rformer-tf.js +34 -43
  39. package/core/rformer.js +17 -32
  40. package/core/sieve.js +8 -3
  41. package/core/symbols/archetypes.js +3 -3
  42. package/core/symbols/base.js +4 -4
  43. package/core/symbols/elements.js +6 -3
  44. package/core/symbols/hieroglyphs.js +3 -3
  45. package/core/symbols/iching.js +3 -3
  46. package/core/symbols/index.js +32 -18
  47. package/core/symbols/tarot.js +6 -3
  48. package/core/symbols.js +26 -4
  49. package/core/topology.js +3 -14
  50. package/core/types.js +3 -14
  51. package/engine/aleph.js +8 -6
  52. package/engine/index.js +4 -2
  53. package/index.js +3 -2
  54. package/modular.js +18 -41
  55. package/package.json +4 -2
  56. package/physics/collapse.js +10 -11
  57. package/physics/entropy.js +8 -8
  58. package/physics/index.js +70 -102
  59. package/physics/kuramoto-coupled-ladder.js +10 -14
  60. package/physics/kuramoto.js +5 -2
  61. package/physics/lyapunov.js +7 -7
  62. package/physics/oscillator.js +5 -1
  63. package/physics/primeon_z_ladder_multi.js +7 -9
  64. package/physics/primeon_z_ladder_u.js +8 -9
  65. package/physics/stochastic-kuramoto.js +7 -7
  66. package/physics/sync-models.js +11 -14
  67. package/telemetry/index.js +1 -1
  68. package/telemetry/metrics.js +3 -8
@@ -6,19 +6,19 @@
6
6
  * by simply creating new files and importing them here.
7
7
  */
8
8
 
9
- const { SymbolDatabase, SymbolCategory, PrimeGenerator } = require('./base');
10
-
11
9
  // Import all symbol definition files
12
- const { archetypeSymbols } = require('./archetypes');
13
- const { tarotSymbols } = require('./tarot');
14
- const { ichingHexagrams } = require('./iching');
15
- const { egyptianHieroglyphs } = require('./hieroglyphs');
16
- const { allElementSymbols } = require('./elements');
17
10
 
18
11
  // ═══════════════════════════════════════════════════════════════════
19
12
  // Create and populate the singleton database
20
13
  // ═══════════════════════════════════════════════════════════════════
21
14
 
15
+ import { SymbolDatabase, SymbolCategory, PrimeGenerator } from './base.js';
16
+ import { archetypeSymbols } from './archetypes.js';
17
+ import { tarotSymbols } from './tarot.js';
18
+ import { ichingHexagrams } from './iching.js';
19
+ import { egyptianHieroglyphs } from './hieroglyphs.js';
20
+ import { allElementSymbols } from './elements.js';
21
+
22
22
  let symbolDatabaseInstance = null;
23
23
 
24
24
  function createSymbolDatabase() {
@@ -50,7 +50,18 @@ const symbolDatabase = createSymbolDatabase();
50
50
  // Convenience exports
51
51
  // ═══════════════════════════════════════════════════════════════════
52
52
 
53
- module.exports = {
53
+ // Convenience functions
54
+ const getSymbol = (id) => symbolDatabase.getSymbol(id);
55
+ const getSymbolByPrime = (prime) => symbolDatabase.getSymbolByPrime(prime);
56
+ const getSymbolsByCategory = (category) => symbolDatabase.getSymbolsByCategory(category);
57
+ const getSymbolsByTag = (tag) => symbolDatabase.getSymbolsByTag(tag);
58
+ const search = (query) => symbolDatabase.search(query);
59
+ const encode = (ids) => symbolDatabase.encode(ids);
60
+ const decode = (sig) => symbolDatabase.decode(sig);
61
+ const getAllSymbols = () => symbolDatabase.getAllSymbols();
62
+ const getStats = () => symbolDatabase.getStats();
63
+
64
+ export {
54
65
  // Database instance and class
55
66
  symbolDatabase,
56
67
  SymbolDatabase,
@@ -65,13 +76,16 @@ module.exports = {
65
76
  allElementSymbols,
66
77
 
67
78
  // Convenience functions
68
- getSymbol: (id) => symbolDatabase.getSymbol(id),
69
- getSymbolByPrime: (prime) => symbolDatabase.getSymbolByPrime(prime),
70
- getSymbolsByCategory: (category) => symbolDatabase.getSymbolsByCategory(category),
71
- getSymbolsByTag: (tag) => symbolDatabase.getSymbolsByTag(tag),
72
- search: (query) => symbolDatabase.search(query),
73
- encode: (ids) => symbolDatabase.encode(ids),
74
- decode: (sig) => symbolDatabase.decode(sig),
75
- getAllSymbols: () => symbolDatabase.getAllSymbols(),
76
- getStats: () => symbolDatabase.getStats()
77
- };
79
+ getSymbol,
80
+ getSymbolByPrime,
81
+ getSymbolsByCategory,
82
+ getSymbolsByTag,
83
+ search,
84
+ encode,
85
+ decode,
86
+ getAllSymbols,
87
+ getStats
88
+ };
89
+
90
+ // Default export for backward compatibility
91
+ export default symbolDatabase;
@@ -6,7 +6,7 @@
6
6
  * symbolic meaning from Kabbalistic, astrological, and esoteric traditions.
7
7
  */
8
8
 
9
- const { SymbolCategory } = require('./base');
9
+ import { SymbolCategory } from './base.js';
10
10
 
11
11
  const tarotMajorArcana = [
12
12
  // ═══════════════════════════════════════════════════════════════════
@@ -204,8 +204,11 @@ const tarotMinorSuits = [
204
204
  }
205
205
  ];
206
206
 
207
- module.exports = {
207
+ // Named export for tarotSymbols (used by index.js)
208
+ export const tarotSymbols = [...tarotMajorArcana, ...tarotMinorSuits];
209
+
210
+ export default {
208
211
  tarotMajorArcana,
209
212
  tarotMinorSuits,
210
- tarotSymbols: [...tarotMajorArcana, ...tarotMinorSuits]
213
+ tarotSymbols
211
214
  };
package/core/symbols.js CHANGED
@@ -1,22 +1,44 @@
1
1
  /**
2
2
  * Symbol Database
3
- *
3
+ *
4
4
  * Comprehensive database of 400+ symbols with:
5
5
  * - Unicode emoji representation
6
6
  * - Prime number assignment (unique per symbol)
7
7
  * - Category organization
8
8
  * - Cultural tags for cross-cultural mapping
9
9
  * - Rich, detailed meanings
10
- *
10
+ *
11
11
  * Includes:
12
12
  * - Jungian archetypes and mythological figures
13
13
  * - Tarot Major and Minor Arcana
14
14
  * - I-Ching 64 hexagrams
15
15
  * - Egyptian hieroglyphs
16
16
  * - Natural elements, places, objects, abstracts
17
- *
17
+ *
18
18
  * Refactored to use modular symbol definition files.
19
19
  */
20
20
 
21
21
  // Re-export everything from the modular structure
22
- module.exports = require('./symbols/index');
22
+ export {
23
+ symbolDatabase,
24
+ SymbolDatabase,
25
+ SymbolCategory,
26
+ PrimeGenerator,
27
+ archetypeSymbols,
28
+ tarotSymbols,
29
+ ichingHexagrams,
30
+ egyptianHieroglyphs,
31
+ allElementSymbols,
32
+ getSymbol,
33
+ getSymbolByPrime,
34
+ getSymbolsByCategory,
35
+ getSymbolsByTag,
36
+ search,
37
+ encode,
38
+ decode,
39
+ getAllSymbols,
40
+ getStats
41
+ } from './symbols/index.js';
42
+
43
+ // Default export
44
+ export { default } from './symbols/index.js';
package/core/topology.js CHANGED
@@ -15,8 +15,6 @@
15
15
  * - Fine structure constant: α⁻¹ = 108 + 29 = 137
16
16
  */
17
17
 
18
- const { TWIST_108, factorize, isPrime } = require('./prime');
19
-
20
18
  // ============================================================================
21
19
  // KNOT INVARIANTS
22
20
  // ============================================================================
@@ -24,6 +22,8 @@ const { TWIST_108, factorize, isPrime } = require('./prime');
24
22
  /**
25
23
  * Knot class representing a mathematical knot with topological invariants
26
24
  */
25
+ import { TWIST_108, factorize, isPrime } from './prime.js';
26
+
27
27
  class Knot {
28
28
  /**
29
29
  * Create a knot with specified invariants
@@ -627,29 +627,18 @@ class FreeEnergyDynamics {
627
627
  // EXPORTS
628
628
  // ============================================================================
629
629
 
630
- module.exports = {
631
- // Knot classes
630
+ export {
632
631
  Knot,
633
-
634
- // Standard knots
635
632
  UNKNOT,
636
633
  TREFOIL,
637
634
  FIGURE_EIGHT,
638
635
  CINQUEFOIL,
639
636
  THREE_TWIST,
640
637
  STANDARD_KNOTS,
641
-
642
- // Physical constants
643
638
  PhysicalConstants,
644
-
645
- // Observer hierarchy
646
639
  OBSERVER_HIERARCHY,
647
640
  getObserverLevel,
648
641
  observerCapacity,
649
-
650
- // Gauge symmetry
651
642
  GaugeSymmetry,
652
-
653
- // Free energy dynamics
654
643
  FreeEnergyDynamics
655
644
  };
package/core/types.js CHANGED
@@ -13,8 +13,6 @@
13
13
  * - Full typing judgments Γ ⊢ e : T
14
14
  */
15
15
 
16
- const { isPrime, firstNPrimes } = require('./prime');
17
-
18
16
  // ============================================================================
19
17
  // TYPE DEFINITIONS
20
18
  // ============================================================================
@@ -22,6 +20,8 @@ const { isPrime, firstNPrimes } = require('./prime');
22
20
  /**
23
21
  * Type constants for the type system
24
22
  */
23
+ import { isPrime, firstNPrimes } from './prime.js';
24
+
25
25
  const Types = {
26
26
  NOUN: 'N',
27
27
  ADJECTIVE: 'A',
@@ -878,31 +878,20 @@ function IMPL(s1, s2) {
878
878
  // EXPORTS
879
879
  // ============================================================================
880
880
 
881
- module.exports = {
882
- // Type constants
881
+ export {
883
882
  Types,
884
-
885
- // Base class
886
883
  Term,
887
-
888
- // Term classes
889
884
  NounTerm,
890
885
  AdjTerm,
891
886
  ChainTerm,
892
887
  FusionTerm,
893
-
894
- // Sentence classes
895
888
  SentenceTerm,
896
889
  NounSentence,
897
890
  SeqSentence,
898
891
  ImplSentence,
899
-
900
- // Typing system
901
892
  TypingContext,
902
893
  TypingJudgment,
903
894
  TypeChecker,
904
-
905
- // Builders
906
895
  N,
907
896
  A,
908
897
  FUSE,
package/engine/aleph.js CHANGED
@@ -6,11 +6,11 @@
6
6
  * We excite the field, evolve it, and sample at coherent emission moments.
7
7
  */
8
8
 
9
- const { Hypercomplex } = require('../core/hypercomplex');
10
- const { KuramotoModel } = require('../physics/kuramoto');
11
- const { stateEntropy, coherence } = require('../physics/entropy');
12
- const { estimateLyapunov, adaptiveCoupling, classifyStability } = require('../physics/lyapunov');
13
- const { collapseProbability, shouldCollapse, bornMeasurement } = require('../physics/collapse');
9
+ import { Hypercomplex } from '../core/hypercomplex.js';
10
+ import { KuramotoModel } from '../physics/kuramoto.js';
11
+ import { stateEntropy, coherence } from '../physics/entropy.js';
12
+ import { estimateLyapunov, adaptiveCoupling, classifyStability } from '../physics/lyapunov.js';
13
+ import { collapseProbability, shouldCollapse, bornMeasurement } from '../physics/collapse.js';
14
14
 
15
15
  class AlephEngine {
16
16
  constructor(backend, options = {}) {
@@ -415,4 +415,6 @@ class AlephEngine {
415
415
  }
416
416
  }
417
417
 
418
- module.exports = { AlephEngine };
418
+ export {
419
+ AlephEngine
420
+ };
package/engine/index.js CHANGED
@@ -2,6 +2,8 @@
2
2
  * Engine - exports unified AlephEngine
3
3
  */
4
4
 
5
- const { AlephEngine } = require('./aleph');
5
+ import { AlephEngine } from './aleph.js';
6
6
 
7
- module.exports = { AlephEngine };
7
+ export {
8
+ AlephEngine
9
+ };
package/index.js CHANGED
@@ -11,7 +11,7 @@
11
11
  * - Multiple backends (semantic, cryptographic, scientific)
12
12
  *
13
13
  * @example
14
- * const { createEngine } = require('@aleph-ai/tinyaleph');
14
+ * import { createEngine } from '@aleph-ai/tinyaleph';
15
15
  *
16
16
  * const engine = createEngine('semantic', config);
17
17
  * const result = engine.run('What is wisdom?');
@@ -20,4 +20,5 @@
20
20
  * @module @aleph-ai/tinyaleph
21
21
  */
22
22
 
23
- module.exports = require('./modular');
23
+ export * from './modular.js';
24
+ export { default } from './modular.js';
package/modular.js CHANGED
@@ -24,28 +24,26 @@
24
24
  */
25
25
 
26
26
  // Core mathematical foundation
27
- const core = require('./core');
27
+ import core from './core/index.js';
28
28
 
29
29
  // Enochian Packet Layer (Section 7.4 of whitepaper)
30
- const enochian = require('./core/enochian');
31
- const enochianVocabulary = require('./core/enochian-vocabulary');
30
+ import enochian from './core/enochian.js';
31
+ import enochianVocabulary from './core/enochian-vocabulary.js';
32
32
 
33
33
  // Browser-compatible utilities (extracted from apps/sentient)
34
- const errors = require('./core/errors');
35
- const logger = require('./core/logger');
36
- const metrics = require('./telemetry/metrics');
37
- const transport = require('./transport');
38
- const profiling = require('./profiling/primitives');
34
+ import errors from './core/errors.js';
35
+ import logger from './core/logger.js';
36
+ import metrics from './telemetry/metrics.js';
39
37
 
40
38
  // Observer architecture (Sentient Observer core modules)
41
- const smf = require('./observer/smf');
42
- const prsc = require('./observer/prsc');
43
- const temporal = require('./observer/temporal');
44
- const entanglement = require('./observer/entanglement');
45
- const agency = require('./observer/agency');
46
- const boundary = require('./observer/boundary');
47
- const safety = require('./observer/safety');
48
- const hqe = require('./observer/hqe');
39
+ import smf from './observer/smf.js';
40
+ import prsc from './observer/prsc.js';
41
+ import temporal from './observer/temporal.js';
42
+ import entanglement from './observer/entanglement.js';
43
+ import agency from './observer/agency.js';
44
+ import boundary from './observer/boundary.js';
45
+ import safety from './observer/safety.js';
46
+ import hqe from './observer/hqe.js';
49
47
  const {
50
48
  Hypercomplex,
51
49
  FANO_LINES,
@@ -101,7 +99,7 @@ const {
101
99
  } = core;
102
100
 
103
101
  // Physics engine
104
- const physics = require('./physics');
102
+ import physics from './physics/index.js';
105
103
  const {
106
104
  Oscillator,
107
105
  OscillatorBank,
@@ -160,7 +158,7 @@ const {
160
158
  } = physics;
161
159
 
162
160
  // Domain backends
163
- const backends = require('./backends');
161
+ import backends from './backends/index.js';
164
162
  const {
165
163
  Backend,
166
164
  SemanticBackend,
@@ -180,7 +178,7 @@ const {
180
178
  } = backends;
181
179
 
182
180
  // Unified engine
183
- const engine = require('./engine');
181
+ import engine from './engine/index.js';
184
182
  const { AlephEngine } = engine;
185
183
 
186
184
  /**
@@ -231,7 +229,7 @@ function deriveKey(password, salt, length = 32, iterations = 10000) {
231
229
  return backend.deriveKey(password, salt, length, iterations);
232
230
  }
233
231
 
234
- module.exports = {
232
+ export default {
235
233
  // Main engine
236
234
  AlephEngine,
237
235
  createEngine,
@@ -413,27 +411,6 @@ module.exports = {
413
411
  MetricRegistry: metrics.MetricRegistry,
414
412
  MetricType: metrics.MetricType,
415
413
 
416
- // Transport
417
- transport,
418
- Transport: transport.Transport,
419
- WebSocketTransport: transport.WebSocketTransport,
420
- SSETransport: transport.SSETransport,
421
- MemoryTransport: transport.MemoryTransport,
422
- PollingTransport: transport.PollingTransport,
423
- TransportManager: transport.TransportManager,
424
- TransportState: transport.TransportState,
425
-
426
- // Profiling primitives
427
- profiling,
428
- RingBuffer: profiling.RingBuffer,
429
- Timer: profiling.Timer,
430
- Sampler: profiling.Sampler,
431
- RateCalculator: profiling.RateCalculator,
432
- MovingAverage: profiling.MovingAverage,
433
- Profiler: profiling.Profiler,
434
- hrtime: profiling.hrtime,
435
- hrtimeNs: profiling.hrtimeNs,
436
-
437
414
  // Observer Architecture (Sentient Observer core)
438
415
  // SMF - Sedenion Memory Field
439
416
  smf,
package/package.json CHANGED
@@ -1,8 +1,10 @@
1
1
  {
2
2
  "name": "@aleph-ai/tinyaleph",
3
- "version": "1.4.4",
3
+ "version": "1.5.2",
4
4
  "description": "Prime-resonant semantic computing framework - hypercomplex algebra, oscillator dynamics, and entropy-minimizing reasoning",
5
+ "type": "module",
5
6
  "main": "index.js",
7
+ "module": "index.js",
6
8
  "types": "types/index.d.ts",
7
9
  "exports": {
8
10
  ".": {
@@ -78,7 +80,7 @@
78
80
  },
79
81
  "homepage": "https://github.com/aleph-ai/tinyaleph#readme",
80
82
  "engines": {
81
- "node": ">=14.0.0"
83
+ "node": ">=16.0.0"
82
84
  },
83
85
  "files": [
84
86
  "index.js",
@@ -2,6 +2,8 @@
2
2
  * Quantum-inspired state collapse mechanics
3
3
  */
4
4
 
5
+ import { Hypercomplex } from '../core/hypercomplex.js';
6
+
5
7
  function collapseProbability(entropyIntegral, lyapunovFactor = 1) {
6
8
  const factor = lyapunovFactor < 0 ? 1.5 : 0.5;
7
9
  return (1 - Math.exp(-entropyIntegral)) * factor;
@@ -28,7 +30,6 @@ function measureState(hypercomplex, basis = null) {
28
30
  * Collapse state to a specific basis vector
29
31
  */
30
32
  function collapseToIndex(hypercomplex, index) {
31
- const { Hypercomplex } = require('../core/hypercomplex');
32
33
  const collapsed = Hypercomplex.zero(hypercomplex.dim);
33
34
  collapsed.c[index] = hypercomplex.c[index] >= 0 ? 1 : -1;
34
35
  return collapsed;
@@ -58,7 +59,6 @@ function bornMeasurement(hypercomplex) {
58
59
  * Partial collapse: mix between current state and collapsed state
59
60
  */
60
61
  function partialCollapse(hypercomplex, targetIndex, strength = 0.5) {
61
- const { Hypercomplex } = require('../core/hypercomplex');
62
62
  const collapsed = Hypercomplex.zero(hypercomplex.dim);
63
63
  const sign = hypercomplex.c[targetIndex] >= 0 ? 1 : -1;
64
64
  collapsed.c[targetIndex] = sign;
@@ -75,7 +75,6 @@ function partialCollapse(hypercomplex, targetIndex, strength = 0.5) {
75
75
  * Decoherence: gradual loss of quantum coherence
76
76
  */
77
77
  function applyDecoherence(hypercomplex, rate = 0.1) {
78
- const { Hypercomplex } = require('../core/hypercomplex');
79
78
  const result = Hypercomplex.zero(hypercomplex.dim);
80
79
  for (let i = 0; i < hypercomplex.dim; i++) {
81
80
  // Add small random noise proportional to rate
@@ -84,12 +83,12 @@ function applyDecoherence(hypercomplex, rate = 0.1) {
84
83
  return result.normalize();
85
84
  }
86
85
 
87
- module.exports = {
88
- collapseProbability,
89
- shouldCollapse,
90
- measureState,
91
- collapseToIndex,
92
- bornMeasurement,
93
- partialCollapse,
94
- applyDecoherence
86
+ export {
87
+ collapseProbability,
88
+ shouldCollapse,
89
+ measureState,
90
+ collapseToIndex,
91
+ bornMeasurement,
92
+ partialCollapse,
93
+ applyDecoherence
95
94
  };
@@ -77,12 +77,12 @@ function oscillatorEntropy(bank) {
77
77
  return shannonEntropy(probs);
78
78
  }
79
79
 
80
- module.exports = {
81
- shannonEntropy,
82
- stateEntropy,
83
- coherence,
84
- mutualInformation,
85
- relativeEntropy,
86
- jointEntropy,
87
- oscillatorEntropy
80
+ export {
81
+ shannonEntropy,
82
+ stateEntropy,
83
+ coherence,
84
+ mutualInformation,
85
+ relativeEntropy,
86
+ jointEntropy,
87
+ oscillatorEntropy
88
88
  };