@agentic-qe/v3 3.0.0-alpha.3

package/tests/unit/causal-discovery/weight-matrix.test.ts

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+/**
+ * Agentic QE v3 - Causal Weight Matrix Tests
+ * ADR-035: STDP-based spike timing correlation for root cause analysis
+ */
+
+import { describe, it, expect, beforeEach } from 'vitest';
+import { CausalWeightMatrix } from '../../../src/causal-discovery/weight-matrix';
+import { TestEvent, TestEventType } from '../../../src/causal-discovery/types';
+
+describe('CausalWeightMatrix', () => {
+  let matrix: CausalWeightMatrix;
+
+  beforeEach(() => {
+    matrix = new CausalWeightMatrix();
+  });
+
+  describe('initialization', () => {
+    it('should initialize with zero weights', () => {
+      expect(matrix.getWeight('test_started', 'test_passed')).toBe(0);
+      expect(matrix.getWeight('build_failed', 'test_failed')).toBe(0);
+    });
+
+    it('should accept custom configuration', () => {
+      const customMatrix = new CausalWeightMatrix({
+        timeWindow: 100,
+        learningRate: 0.05,
+        causalThreshold: 0.2,
+      });
+      expect(customMatrix).toBeDefined();
+    });
+  });
+
+  describe('STDP learning', () => {
+    it('should strengthen weight when cause precedes effect', () => {
+      const baseTime = Date.now();
+
+      // Event A happens first
+      matrix.updateWeights({
+        type: 'code_changed',
+        timestamp: baseTime,
+      });
+
+      // Event B happens shortly after (within time window)
+      matrix.updateWeights({
+        type: 'test_failed',
+        timestamp: baseTime + 20,
+      });
+
+      // Weight A->B should be positive (A causes B pattern)
+      const weight = matrix.getWeight('code_changed', 'test_failed');
+      expect(weight).toBeGreaterThan(0);
+    });
+
+    it('should create stronger weights for shorter timing differences', () => {
+      const baseTime = Date.now();
+
+      // Matrix 1: short timing difference
+      const matrix1 = new CausalWeightMatrix({ timeWindow: 100 });
+      matrix1.updateWeights({ type: 'code_changed', timestamp: baseTime });
+      matrix1.updateWeights({ type: 'test_failed', timestamp: baseTime + 10 });
+      const shortWeight = matrix1.getWeight('code_changed', 'test_failed');
+
+      // Matrix 2: longer timing difference
+      const matrix2 = new CausalWeightMatrix({ timeWindow: 100 });
+      matrix2.updateWeights({ type: 'code_changed', timestamp: baseTime });
+      matrix2.updateWeights({ type: 'test_failed', timestamp: baseTime + 40 });
+      const longWeight = matrix2.getWeight('code_changed', 'test_failed');
+
+      // Shorter timing should result in stronger weight (STDP exponential decay)
+      expect(shortWeight).toBeGreaterThan(longWeight);
+    });
+
+    it('should not create weights for events outside time window', () => {
+      const baseTime = Date.now();
+      const customMatrix = new CausalWeightMatrix({ timeWindow: 50 });
+
+      customMatrix.updateWeights({
+        type: 'code_changed',
+        timestamp: baseTime,
+      });
+
+      customMatrix.updateWeights({
+        type: 'test_failed',
+        timestamp: baseTime + 100, // Outside 50ms window
+      });
+
+      const weight = customMatrix.getWeight('code_changed', 'test_failed');
+      expect(weight).toBe(0);
+    });
+
+    it('should accumulate weights with repeated observations', () => {
+      const baseTime = Date.now();
+
+      // First observation
+      matrix.updateWeights({ type: 'deploy_started', timestamp: baseTime });
+      matrix.updateWeights({ type: 'alert_fired', timestamp: baseTime + 20 });
+      const weight1 = matrix.getWeight('deploy_started', 'alert_fired');
+
+      // Second observation
+      matrix.updateWeights({ type: 'deploy_started', timestamp: baseTime + 1000 });
+      matrix.updateWeights({ type: 'alert_fired', timestamp: baseTime + 1020 });
+      const weight2 = matrix.getWeight('deploy_started', 'alert_fired');
+
+      expect(weight2).toBeGreaterThan(weight1);
+    });
+  });
+
+  describe('weight operations', () => {
+    it('should set and get weights directly', () => {
+      matrix.setWeight('exception', 'test_failed', 0.75);
+      expect(matrix.getWeight('exception', 'test_failed')).toBe(0.75);
+    });
+
+    it('should return full weight entry', () => {
+      const baseTime = Date.now();
+      matrix.updateWeights({ type: 'timeout', timestamp: baseTime });
+      matrix.updateWeights({ type: 'test_failed', timestamp: baseTime + 15 });
+
+      const entry = matrix.getWeightEntry('timeout', 'test_failed');
+      expect(entry).toBeDefined();
+      expect(entry!.weight).toBeGreaterThan(0);
+      expect(entry!.observations).toBeGreaterThan(0);
+      expect(entry!.lastUpdate).toBeGreaterThan(0);
+      expect(entry!.avgTimingDiff).toBeGreaterThan(0);
+    });
+  });
+
+  describe('batch processing', () => {
+    it('should process events in chronological order', () => {
+      const baseTime = Date.now();
+
+      // Submit events out of order
+      matrix.updateWeightsBatch([
+        { type: 'test_failed', timestamp: baseTime + 30 },
+        { type: 'code_changed', timestamp: baseTime },
+        { type: 'build_started', timestamp: baseTime + 10 },
+      ]);
+
+      // Should have learned: code_changed -> build_started -> test_failed
+      expect(matrix.getWeight('code_changed', 'build_started')).toBeGreaterThan(0);
+      expect(matrix.getWeight('build_started', 'test_failed')).toBeGreaterThan(0);
+    });
+  });
+
+  describe('decay', () => {
+    it('should reduce weights when decay is applied', () => {
+      matrix.setWeight('memory_spike', 'exception', 0.5);
+      const initialWeight = matrix.getWeight('memory_spike', 'exception');
+
+      matrix.decay();
+
+      const decayedWeight = matrix.getWeight('memory_spike', 'exception');
+      expect(decayedWeight).toBeLessThan(initialWeight);
+    });
+
+    it('should remove negligible weights after decay', () => {
+      matrix.setWeight('cpu_spike', 'timeout', 0.002);
+
+      // Apply decay multiple times to get below threshold
+      for (let i = 0; i < 10; i++) {
+        matrix.decay();
+      }
+
+      // Weight should be removed (below 0.001 threshold) after enough decay
+      const weight = matrix.getWeight('cpu_spike', 'timeout');
+      expect(weight).toBeLessThan(0.002);
+    });
+
+    it('should apply time-based decay', () => {
+      matrix.setWeight('network_error', 'api_error', 0.5);
+
+      // Apply 1 second of decay
+      matrix.decayByTime(1000);
+
+      const weight = matrix.getWeight('network_error', 'api_error');
+      expect(weight).toBeLessThan(0.5);
+      expect(weight).toBeGreaterThan(0);
+    });
+  });
+
+  describe('causal graph extraction', () => {
+    it('should extract graph with significant edges only', () => {
+      // Create some weights
+      matrix.setWeight('code_changed', 'test_failed', 0.3);
+      matrix.setWeight('config_changed', 'test_failed', 0.05); // Below default threshold
+
+      const graph = matrix.extractCausalGraph();
+
+      expect(graph.nodes).toContain('code_changed');
+      expect(graph.nodes).toContain('test_failed');
+      // config_changed edge should be excluded (below threshold)
+      expect(graph.edges.find(e => e.source === 'config_changed')).toBeUndefined();
+    });
+
+    it('should mark positive weights as causes and negative as prevents', () => {
+      matrix.setWeight('test_started', 'test_passed', 0.5);
+      matrix.setWeight('exception', 'test_passed', -0.3);
+
+      const graph = matrix.extractCausalGraph();
+
+      const causesEdge = graph.edges.find(
+        e => e.source === 'test_started' && e.target === 'test_passed'
+      );
+      expect(causesEdge?.relation).toBe('causes');
+
+      // Note: The current implementation doesn't create negative weights via STDP
+      // But direct setWeight with negative values should work
+    });
+  });
+
+  describe('edge queries', () => {
+    it('should get edges from a source', () => {
+      matrix.setWeight('code_changed', 'build_started', 0.4);
+      matrix.setWeight('code_changed', 'test_started', 0.3);
+      matrix.setWeight('build_started', 'test_started', 0.2);
+
+      const edges = matrix.getEdgesFrom('code_changed');
+      expect(edges.length).toBe(2);
+      expect(edges[0].strength).toBeGreaterThanOrEqual(edges[1].strength); // Sorted
+    });
+
+    it('should get edges to a target', () => {
+      matrix.setWeight('code_changed', 'test_failed', 0.5);
+      matrix.setWeight('config_changed', 'test_failed', 0.4);
+      matrix.setWeight('timeout', 'test_failed', 0.3);
+
+      const edges = matrix.getEdgesTo('test_failed');
+      expect(edges.length).toBe(3);
+      expect(edges[0].source).toBe('code_changed'); // Strongest first
+    });
+  });
+
+  describe('statistics', () => {
+    it('should compute matrix statistics', () => {
+      matrix.setWeight('a' as TestEventType, 'b' as TestEventType, 0.5);
+      matrix.setWeight('b' as TestEventType, 'c' as TestEventType, 0.3);
+      matrix.setWeight('a' as TestEventType, 'c' as TestEventType, 0.2);
+
+      const stats = matrix.getStats();
+
+      expect(stats.nonZeroWeights).toBe(3);
+      expect(stats.maxAbsWeight).toBe(0.5);
+      expect(stats.avgAbsWeight).toBeCloseTo(0.333, 1);
+    });
+
+    it('should track observation count', () => {
+      const baseTime = Date.now();
+      matrix.updateWeights({ type: 'test_started', timestamp: baseTime });
+      matrix.updateWeights({ type: 'test_passed', timestamp: baseTime + 10 });
+      matrix.updateWeights({ type: 'test_started', timestamp: baseTime + 100 });
+
+      expect(matrix.getObservationCount()).toBe(3);
+    });
+
+    it('should track observed event types', () => {
+      const baseTime = Date.now();
+      matrix.updateWeights({ type: 'test_started', timestamp: baseTime });
+      matrix.updateWeights({ type: 'test_passed', timestamp: baseTime + 10 });
+      matrix.updateWeights({ type: 'test_failed', timestamp: baseTime + 20 });
+
+      const types = matrix.getObservedEventTypes();
+      expect(types).toContain('test_started');
+      expect(types).toContain('test_passed');
+      expect(types).toContain('test_failed');
+    });
+  });
+
+  describe('serialization', () => {
+    it('should serialize to JSON', () => {
+      matrix.setWeight('code_changed', 'test_failed', 0.6);
+
+      const json = matrix.toJSON();
+      expect(json['code_changed->test_failed']).toBeDefined();
+      expect(json['code_changed->test_failed'].weight).toBe(0.6);
+    });
+
+    it('should deserialize from JSON', () => {
+      const data = {
+        'build_failed->test_failed': {
+          weight: 0.8,
+          observations: 5,
+          lastUpdate: Date.now(),
+          avgTimingDiff: 15,
+        },
+      };
+
+      matrix.fromJSON(data);
+
+      expect(matrix.getWeight('build_failed', 'test_failed')).toBe(0.8);
+    });
+  });
+
+  describe('merge', () => {
+    it('should merge weights from another matrix', () => {
+      // Matrix 1 has some weights
+      matrix.setWeight('code_changed', 'test_failed', 0.4);
+      matrix.setWeight('config_changed', 'build_failed', 0.3);
+
+      // Matrix 2 has overlapping and unique weights
+      const other = new CausalWeightMatrix();
+      other.setWeight('code_changed', 'test_failed', 0.6);
+      other.setWeight('deploy_failed', 'alert_fired', 0.5);
+
+      matrix.merge(other, 0.5);
+
+      // Overlapping weight should be averaged
+      expect(matrix.getWeight('code_changed', 'test_failed')).toBeCloseTo(0.5, 1);
+
+      // Unique weights should be included
+      expect(matrix.getWeight('config_changed', 'build_failed')).toBe(0.3);
+      expect(matrix.getWeight('deploy_failed', 'alert_fired')).toBeCloseTo(0.25, 2);
+    });
+  });
+
+  describe('reset', () => {
+    it('should clear all weights and state', () => {
+      const baseTime = Date.now();
+      matrix.updateWeights({ type: 'test_started', timestamp: baseTime });
+      matrix.updateWeights({ type: 'test_failed', timestamp: baseTime + 10 });
+
+      matrix.reset();
+
+      expect(matrix.getObservationCount()).toBe(0);
+      expect(matrix.getObservedEventTypes().length).toBe(0);
+      expect(matrix.getWeight('test_started', 'test_failed')).toBe(0);
+    });
+  });
+});

package/tests/unit/cli/cli.test.ts

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+/**
+ * Agentic QE v3 - CLI Tests
+ * Tests for the command line interface
+ */
+
+import { describe, it, expect, vi, beforeEach, afterEach } from 'vitest';
+import { QEKernelImpl } from '../../../src/kernel/kernel';
+import { QueenCoordinator, createQueenCoordinator } from '../../../src/coordination/queen-coordinator';
+import { CrossDomainEventRouter } from '../../../src/coordination/cross-domain-router';
+import { DefaultProtocolExecutor } from '../../../src/coordination/protocol-executor';
+import { WorkflowOrchestrator } from '../../../src/coordination/workflow-orchestrator';
+import { DomainName, ALL_DOMAINS } from '../../../src/shared/types';
+
+describe('CLI Components', () => {
+  let kernel: QEKernelImpl;
+  let router: CrossDomainEventRouter;
+  let queen: QueenCoordinator;
+
+  beforeEach(async () => {
+    kernel = new QEKernelImpl({
+      maxConcurrentAgents: 5,
+      memoryBackend: 'hybrid',
+      hnswEnabled: false,
+      lazyLoading: true,
+      enabledDomains: [...ALL_DOMAINS],
+    });
+    await kernel.initialize();
+
+    router = new CrossDomainEventRouter(kernel.eventBus);
+    await router.initialize();
+
+    const getDomainAPI = <T>(domain: DomainName): T | undefined => {
+      return kernel.getDomainAPI<T>(domain);
+    };
+
+    const protocolExecutor = new DefaultProtocolExecutor(
+      kernel.eventBus,
+      kernel.memory,
+      getDomainAPI
+    );
+
+    queen = createQueenCoordinator(
+      kernel,
+      router,
+      protocolExecutor,
+      undefined
+    );
+    await queen.initialize();
+  });
+
+  afterEach(async () => {
+    await queen.dispose();
+    await router.dispose();
+    await kernel.dispose();
+  });
+
+  describe('Kernel Initialization', () => {
+    it('should initialize kernel with configuration', () => {
+      const health = kernel.getHealth();
+      expect(health.status).toBeDefined();
+      expect(health.agents.maxAllowed).toBe(5);
+    });
+
+    it('should provide domain API access', () => {
+      // Lazy loading means API might not be available immediately
+      // This tests the mechanism exists
+      const api = kernel.getDomainAPI('test-generation');
+      // May be undefined due to lazy loading
+      expect(api === undefined || api !== null).toBe(true);
+    });
+  });
+
+  describe('Router Initialization', () => {
+    it('should initialize cross-domain router', async () => {
+      // Router is initialized if we reach this point without error
+      // The router exposes event handling methods
+      const history = router.getHistory({ limit: 1 });
+      expect(Array.isArray(history)).toBe(true);
+    });
+  });
+
+  describe('Queen Coordinator Integration', () => {
+    it('should initialize queen coordinator', async () => {
+      const health = queen.getHealth();
+      expect(['healthy', 'degraded']).toContain(health.status);
+      expect(health.totalAgents).toBeGreaterThanOrEqual(0);
+    });
+
+    it('should accept task submission', async () => {
+      const result = await queen.submitTask({
+        type: 'generate-tests',
+        priority: 'p1',
+        targetDomains: [],
+        payload: { source: 'test.ts' },
+        timeout: 30000,
+      });
+
+      expect(result.success).toBe(true);
+      if (result.success) {
+        expect(result.value).toBeDefined();
+      }
+    });
+
+    it('should list tasks', () => {
+      const tasks = queen.listTasks({});
+      expect(Array.isArray(tasks)).toBe(true);
+    });
+
+    it('should provide domain health', () => {
+      const health = queen.getDomainHealth('test-generation');
+      expect(health).toBeDefined();
+      expect(health?.status).toBeDefined();
+    });
+
+    it('should provide domain load', () => {
+      const load = queen.getDomainLoad('test-generation');
+      expect(typeof load).toBe('number');
+      expect(load).toBeGreaterThanOrEqual(0);
+    });
+
+    it('should provide metrics', () => {
+      const metrics = queen.getMetrics();
+      expect(metrics.tasksReceived).toBeGreaterThanOrEqual(0);
+      expect(metrics.uptime).toBeGreaterThanOrEqual(0);
+    });
+  });
+
+  describe('Task Types', () => {
+    const taskTypes = [
+      'generate-tests',
+      'execute-tests',
+      'analyze-coverage',
+      'assess-quality',
+      'predict-defects',
+      'validate-requirements',
+      'index-code',
+      'scan-security',
+      'validate-contracts',
+      'test-accessibility',
+      'run-chaos',
+      'optimize-learning',
+    ] as const;
+
+    it.each(taskTypes)('should accept %s task type', async (taskType) => {
+      const result = await queen.submitTask({
+        type: taskType,
+        priority: 'p2',
+        targetDomains: [],
+        payload: {},
+        timeout: 10000,
+      });
+
+      expect(result.success).toBe(true);
+    });
+  });
+
+  describe('Priority Handling', () => {
+    it('should accept all priority levels', async () => {
+      const priorities = ['p0', 'p1', 'p2', 'p3'] as const;
+
+      for (const priority of priorities) {
+        const result = await queen.submitTask({
+          type: 'generate-tests',
+          priority,
+          targetDomains: [],
+          payload: {},
+          timeout: 10000,
+        });
+        expect(result.success).toBe(true);
+      }
+    });
+  });
+
+  describe('Agent Management', () => {
+    it('should list all agents', () => {
+      const agents = queen.listAllAgents();
+      expect(Array.isArray(agents)).toBe(true);
+    });
+
+    it('should get agents by domain', () => {
+      const agents = queen.getAgentsByDomain('test-generation');
+      expect(Array.isArray(agents)).toBe(true);
+    });
+
+    it('should request agent spawn', async () => {
+      const result = await queen.requestAgentSpawn(
+        'test-generation',
+        'worker',
+        ['unit-test']
+      );
+      expect(result.success).toBe(true);
+    });
+  });
+
+  describe('Protocol Execution', () => {
+    it('should attempt protocol execution', async () => {
+      // Protocol may not exist, but mechanism should work
+      const result = await queen.executeProtocol('non-existent-protocol', {});
+      // Expected to fail as protocol doesn't exist
+      expect(result.success).toBe(false);
+    });
+  });
+
+  describe('Cleanup', () => {
+    it('should dispose cleanly', async () => {
+      // Create fresh instances for disposal test
+      const testKernel = new QEKernelImpl({
+        maxConcurrentAgents: 3,
+        lazyLoading: true,
+      });
+      await testKernel.initialize();
+
+      const testRouter = new CrossDomainEventRouter(testKernel.eventBus);
+      await testRouter.initialize();
+
+      const getDomainAPI = <T>(domain: DomainName): T | undefined => {
+        return testKernel.getDomainAPI<T>(domain);
+      };
+
+      const testProtocolExecutor = new DefaultProtocolExecutor(
+        testKernel.eventBus,
+        testKernel.memory,
+        getDomainAPI
+      );
+
+      const testQueen = createQueenCoordinator(
+        testKernel,
+        testRouter,
+        testProtocolExecutor,
+        undefined
+      );
+      await testQueen.initialize();
+
+      // Dispose in order
+      await testQueen.dispose();
+      await testRouter.dispose();
+      await testKernel.dispose();
+
+      // Verify clean state after disposal
+      expect(true).toBe(true);
+    });
+  });
+});
+
+describe('CLI Command Patterns', () => {
+  describe('Command Structure', () => {
+    it('should have init command requirements', () => {
+      // Test validates that init command accepts expected options
+      const initOptions = {
+        domains: 'all',
+        maxAgents: '15',
+        memory: 'hybrid',
+        lazy: false,
+      };
+
+      expect(initOptions.domains).toBe('all');
+      expect(parseInt(initOptions.maxAgents, 10)).toBe(15);
+      expect(initOptions.memory).toBe('hybrid');
+      expect(initOptions.lazy).toBe(false);
+    });
+
+    it('should have task command structure', () => {
+      // Test validates task command structure
+      const taskOptions = {
+        type: 'generate-tests',
+        priority: 'p1',
+        domain: 'test-generation',
+        timeout: '300000',
+        payload: '{}',
+      };
+
+      expect(taskOptions.type).toBeDefined();
+      expect(['p0', 'p1', 'p2', 'p3']).toContain(taskOptions.priority);
+      expect(parseInt(taskOptions.timeout, 10)).toBeGreaterThan(0);
+      expect(JSON.parse(taskOptions.payload)).toEqual({});
+    });
+
+    it('should have agent command structure', () => {
+      const agentOptions = {
+        domain: 'test-generation',
+        type: 'worker',
+        capabilities: 'unit-test,integration-test',
+      };
+
+      expect(ALL_DOMAINS).toContain(agentOptions.domain);
+      expect(agentOptions.type).toBe('worker');
+      expect(agentOptions.capabilities.split(',')).toHaveLength(2);
+    });
+  });
+
+  describe('Output Formatting', () => {
+    it('should format status correctly', () => {
+      const formatStatus = (status: string): string => {
+        switch (status) {
+          case 'healthy':
+          case 'completed':
+            return 'green';
+          case 'degraded':
+          case 'running':
+            return 'yellow';
+          case 'unhealthy':
+          case 'failed':
+            return 'red';
+          default:
+            return 'gray';
+        }
+      };
+
+      expect(formatStatus('healthy')).toBe('green');
+      expect(formatStatus('degraded')).toBe('yellow');
+      expect(formatStatus('unhealthy')).toBe('red');
+      expect(formatStatus('unknown')).toBe('gray');
+    });
+
+    it('should format duration correctly', () => {
+      const formatDuration = (ms: number): string => {
+        if (ms < 1000) return `${ms}ms`;
+        if (ms < 60000) return `${(ms / 1000).toFixed(1)}s`;
+        if (ms < 3600000) return `${(ms / 60000).toFixed(1)}m`;
+        return `${(ms / 3600000).toFixed(1)}h`;
+      };
+
+      expect(formatDuration(500)).toBe('500ms');
+      expect(formatDuration(5000)).toBe('5.0s');
+      expect(formatDuration(120000)).toBe('2.0m');
+      expect(formatDuration(7200000)).toBe('2.0h');
+    });
+
+    it('should format uptime correctly', () => {
+      const formatUptime = (ms: number): string => {
+        const hours = Math.floor(ms / 3600000);
+        const minutes = Math.floor((ms % 3600000) / 60000);
+        const seconds = Math.floor((ms % 60000) / 1000);
+        return `${hours}h ${minutes}m ${seconds}s`;
+      };
+
+      expect(formatUptime(3661000)).toBe('1h 1m 1s');
+      expect(formatUptime(0)).toBe('0h 0m 0s');
+    });
+  });
+});