@aehrc/smart-forms-renderer 0.45.0 → 0.45.1

package/lib/src/utils/validateQuestionnaire.js

@@ -1,559 +0,0 @@
-/*
- * Copyright 2024 Commonwealth Scientific and Industrial Research
- * Organisation (CSIRO) ABN 41 687 119 230.
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- *     http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-import { getQrItemsIndex, mapQItemsIndex } from './mapItem';
-import { isHiddenByEnableWhen } from './qItem';
-import { getDecimalPrecision, getMaxValue, getMinValue, getRegexString, getRegexValidation, getShortText } from './itemControl';
-import { structuredDataCapture } from 'fhir-sdc-helpers';
-import { parseDecimalStringToFloat } from './parseInputs';
-import dayjs from 'dayjs';
-import { questionnaireStore } from '../stores';
-export var ValidationResult;
-(function (ValidationResult) {
-    ValidationResult["unknown"] = "unknown";
-    ValidationResult["questionnaireNotFound"] = "questionnaireNotFound";
-    ValidationResult["questionnaireInactive"] = "questionnaireInactive";
-    ValidationResult["questionnaireDraft"] = "questionnaireDraft";
-    ValidationResult["questionnaireRetired"] = "questionnaireRetired";
-    ValidationResult["invalidLinkId"] = "invalidLinkId";
-    ValidationResult["invalidType"] = "invalidType";
-    ValidationResult["invalidAnswerType"] = "invalidAnswerType";
-    ValidationResult["invalidAnswerOption"] = "invalidAnswerOption";
-    ValidationResult["exclusiveAnswerOption"] = "exclusiveAnswerOption";
-    ValidationResult["invalidUrlValue"] = "invalidUrlValue";
-    ValidationResult["groupShouldNotHaveAnswers"] = "groupShouldNotHaveAnswers";
-    ValidationResult["required"] = "required";
-    ValidationResult["invariant"] = "invariant";
-    ValidationResult["invariantExecution"] = "invariantExecution";
-    ValidationResult["repeats"] = "repeats";
-    ValidationResult["minCount"] = "minCount";
-    ValidationResult["maxCount"] = "maxCount";
-    ValidationResult["minValue"] = "minValue";
-    ValidationResult["maxValue"] = "maxValue";
-    ValidationResult["maxDecimalPlaces"] = "maxDecimalPlaces";
-    ValidationResult["minLength"] = "minLength";
-    ValidationResult["maxLength"] = "maxLength";
-    ValidationResult["invalidNewLine"] = "invalidNewLine";
-    ValidationResult["invalidCoding"] = "invalidCoding";
-    ValidationResult["tsError"] = "tsError";
-    ValidationResult["maxAttachmentSize"] = "maxAttachmentSize";
-    ValidationResult["attachmentSizeInconsistent"] = "attachmentSizeInconsistent";
-    ValidationResult["invalidAttachmentType"] = "invalidAttachmentType";
-    ValidationResult["displayAnswer"] = "displayAnswer";
-    ValidationResult["regex"] = "regex";
-    ValidationResult["regexTimeout"] = "regexTimeout";
-    ValidationResult["invalidRefValue"] = "invalidRefValue";
-    ValidationResult["invalidRefResourceType"] = "invalidRefResourceType";
-    ValidationResult["invalidRefResourceTypeRestriction"] = "invalidRefResourceTypeRestriction";
-    ValidationResult["minValueIncompatUnits"] = "minValueIncompatUnits";
-    ValidationResult["maxValueIncompatUnits"] = "maxValueIncompatUnits";
-    ValidationResult["invalidUnit"] = "invalidUnit";
-    ValidationResult["invalidUnitValueSet"] = "invalidUnitValueSet"; // The unit provided was not in the provided valueset
-})(ValidationResult || (ValidationResult = {}));
-/**
- * Recursively go through the questionnaireResponse and check for un-filled required qItems
- * At the moment item.required for group items are not checked
- *
- * @author Sean Fong
- */
-export function validateQuestionnaire(params) {
-    var _a;
-    const { questionnaire, questionnaireResponse } = params;
-    const enableWhenIsActivated = questionnaireStore.getState().enableWhenIsActivated;
-    const enableWhenItems = questionnaireStore.getState().enableWhenItems;
-    const enableWhenExpressions = questionnaireStore.getState().enableWhenExpressions;
-    if (!questionnaire.item || questionnaire.item.length === 0) {
-        return {};
-    }
-    if (!questionnaireResponse.item || questionnaireResponse.item.length === 0) {
-        questionnaireResponse.item = [];
-    }
-    const qItemsIndexMap = mapQItemsIndex(questionnaire);
-    const topLevelQRItemsByIndex = getQrItemsIndex(questionnaire.item, questionnaireResponse.item, qItemsIndexMap);
-    const invalidItems = {};
-    let qrItemIndex = 0;
-    for (const [index, topLevelQItem] of questionnaire.item.entries()) {
-        let repeatGroupInstances = null;
-        let topLevelQRItem = (_a = topLevelQRItemsByIndex[index]) !== null && _a !== void 0 ? _a : {
-            linkId: topLevelQItem.linkId,
-            text: topLevelQItem.text
-        };
-        // topLevelQRItem being an array means this item is a repeat group
-        const isRepeatGroup = Array.isArray(topLevelQRItem);
-        if (Array.isArray(topLevelQRItem)) {
-            repeatGroupInstances = topLevelQRItem.length;
-            topLevelQRItem = {
-                linkId: topLevelQItem.linkId,
-                text: topLevelQItem.text,
-                item: topLevelQRItem
-            };
-        }
-        const locationExpression = `QuestionnaireResponse.item`;
-        validateItemRecursive({
-            qItem: topLevelQItem,
-            qrItem: topLevelQRItem,
-            qrItemIndex,
-            locationExpression,
-            invalidItems,
-            enableWhenIsActivated,
-            enableWhenItems,
-            enableWhenExpressions,
-            isRepeatGroupInstance: false
-        });
-        // Increment qrItemIndex
-        // If it's a repeat group, increment by the number of instances so qrItemIndex is correct once we reach the next item
-        if (isRepeatGroup && typeof repeatGroupInstances === 'number') {
-            qrItemIndex += repeatGroupInstances;
-        }
-        else {
-            qrItemIndex++;
-        }
-    }
-    return invalidItems;
-}
-function validateItemRecursive(params) {
-    var _a, _b, _c;
-    const { qItem, qrItem, qrItemIndex, invalidItems, enableWhenIsActivated, enableWhenItems, enableWhenExpressions, isRepeatGroupInstance } = params;
-    let { locationExpression } = params;
-    // If item is hidden by enableWhen, skip validation
-    if (isHiddenByEnableWhen({
-        linkId: qItem.linkId,
-        enableWhenIsActivated,
-        enableWhenItems,
-        enableWhenExpressions
-    })) {
-        return;
-    }
-    // Validate repeat groups
-    if (qItem.type === 'group' && qItem.repeats) {
-        if (!isRepeatGroupInstance) {
-            validateRepeatGroupRecursive({
-                qItem,
-                qrItem,
-                qrItemIndex,
-                locationExpression,
-                invalidItems,
-                enableWhenIsActivated,
-                enableWhenItems,
-                enableWhenExpressions,
-                isRepeatGroupInstance: false
-            });
-            return;
-        }
-    }
-    locationExpression = `${locationExpression}[${qrItemIndex}]`;
-    // Recursively validate groups with child items
-    const childQItems = qItem.item;
-    if (childQItems && childQItems.length > 0) {
-        const childQrItems = (_a = qrItem === null || qrItem === void 0 ? void 0 : qrItem.item) !== null && _a !== void 0 ? _a : [];
-        const indexMap = mapQItemsIndex(qItem);
-        const qrItemsByIndex = getQrItemsIndex(childQItems, childQrItems, indexMap);
-        // Check if group is required and has no answers
-        if (qItem.type === 'group' && qItem.required) {
-            if (!qrItem || qrItemsByIndex.length === 0) {
-                invalidItems[qItem.linkId] = createValidationOperationOutcome(ValidationResult.required, qItem, qrItem, null, locationExpression, (_b = invalidItems[qItem.linkId]) === null || _b === void 0 ? void 0 : _b.issue);
-            }
-        }
-        // Loop through child items
-        for (const [index, childQItem] of childQItems.entries()) {
-            const childLocationExpression = `${locationExpression}.item`;
-            let childQRItem = (_c = qrItemsByIndex[index]) !== null && _c !== void 0 ? _c : {
-                linkId: childQItem.linkId,
-                text: childQItem.text
-            };
-            if (Array.isArray(childQRItem)) {
-                childQRItem = {
-                    linkId: childQItem.linkId,
-                    text: childQItem.text,
-                    item: childQRItem
-                };
-            }
-            validateItemRecursive({
-                qItem: childQItem,
-                qrItem: childQRItem,
-                qrItemIndex: index,
-                locationExpression: childLocationExpression,
-                invalidItems: invalidItems,
-                enableWhenIsActivated,
-                enableWhenItems,
-                enableWhenExpressions,
-                isRepeatGroupInstance: false
-            });
-        }
-    }
-    // Validate the item, note that this can be either a group or a non-group
-    validateSingleItem(qItem, qrItem, invalidItems, locationExpression);
-}
-function validateRepeatGroupRecursive(params) {
-    var _a;
-    const { qItem, qrItem, qrItemIndex, locationExpression, invalidItems, enableWhenIsActivated, enableWhenItems, enableWhenExpressions } = params;
-    if (!qItem.item || qItem.item.length === 0 || !qrItem.item || qrItem.item.length === 0) {
-        return;
-    }
-    // Get repeat group answers
-    const repeatGroupAnswers = (_a = qrItem.item) !== null && _a !== void 0 ? _a : [];
-    for (const [index, repeatGroupAnswer] of repeatGroupAnswers.entries()) {
-        // Because the item is a repeat group and might have multiple answer instances, we need to increment the qItemIndex by the instanceIndex
-        const updatedQrItemIndex = qrItemIndex + index;
-        validateItemRecursive({
-            qItem: qItem,
-            qrItem: repeatGroupAnswer,
-            qrItemIndex: updatedQrItemIndex,
-            locationExpression: locationExpression,
-            invalidItems: invalidItems,
-            enableWhenIsActivated,
-            enableWhenItems,
-            enableWhenExpressions,
-            isRepeatGroupInstance: true
-        });
-    }
-}
-function validateSingleItem(qItem, qrItem, invalidItems, locationExpression) {
-    var _a, _b;
-    // Validate item.required first before every other validation check
-    if (qItem.type !== 'display') {
-        if (qItem.required && !qrItem.answer) {
-            invalidItems[qItem.linkId] = createValidationOperationOutcome(ValidationResult.required, qItem, qrItem, null, locationExpression, (_a = invalidItems[qItem.linkId]) === null || _a === void 0 ? void 0 : _a.issue);
-            return invalidItems;
-        }
-    }
-    // Validate regex, maxLength and minLength
-    if (qrItem.answer) {
-        for (const [i, answer] of qrItem.answer.entries()) {
-            // Your code here, you can use 'index' and 'answer' as needed
-            if (answer.valueString || answer.valueInteger || answer.valueDecimal || answer.valueUri) {
-                const invalidInputType = getInputInvalidType({
-                    qItem,
-                    input: getInputInString(answer),
-                    regexValidation: getRegexValidation(qItem),
-                    minLength: structuredDataCapture.getMinLength(qItem),
-                    maxLength: qItem.maxLength,
-                    maxDecimalPlaces: structuredDataCapture.getMaxDecimalPlaces(qItem),
-                    minValue: getMinValue(qItem),
-                    maxValue: getMaxValue(qItem)
-                });
-                if (invalidInputType) {
-                    invalidItems[qItem.linkId] = createValidationOperationOutcome(invalidInputType, qItem, qrItem, i, locationExpression, (_b = invalidItems[qItem.linkId]) === null || _b === void 0 ? void 0 : _b.issue);
-                }
-            }
-        }
-    }
-    return invalidItems;
-}
-function getInputInString(answer) {
-    if (!answer) {
-        return '';
-    }
-    if (answer.valueString) {
-        return answer.valueString;
-    }
-    else if (answer.valueInteger) {
-        return answer.valueInteger.toString();
-    }
-    else if (answer.valueDecimal) {
-        return answer.valueDecimal.toString();
-    }
-    else if (answer.valueUri) {
-        return answer.valueUri;
-    }
-    return '';
-}
-export function getInputInvalidType(getInputInvalidTypeParams) {
-    var _a, _b;
-    const { qItem, input, regexValidation, minLength, maxLength, maxDecimalPlaces, minValue, maxValue } = getInputInvalidTypeParams;
-    if (input) {
-        if (regexValidation && !regexValidation.expression.test(input)) {
-            return ValidationResult.regex;
-        }
-        if (minLength && input.length < minLength) {
-            return ValidationResult.minLength;
-        }
-        if (maxLength && input.length > maxLength) {
-            return ValidationResult.maxLength;
-        }
-        if (maxDecimalPlaces) {
-            const decimalPlaces = (_b = (_a = input.split('.')[1]) === null || _a === void 0 ? void 0 : _a.length) !== null && _b !== void 0 ? _b : 0;
-            if (decimalPlaces > maxDecimalPlaces) {
-                return ValidationResult.maxDecimalPlaces;
-            }
-        }
-        if (minValue) {
-            const minValueError = checkMinValue(qItem, input, minValue);
-            if (minValueError !== null) {
-                return ValidationResult.minValue;
-            }
-        }
-        if (maxValue) {
-            const maxValueError = checkMaxValue(qItem, input, maxValue);
-            if (maxValueError !== null) {
-                return ValidationResult.maxValue;
-            }
-        }
-    }
-    return null;
-}
-function checkMinValue(qItem, input, minValue) {
-    switch (qItem.type) {
-        case 'integer':
-            if (typeof minValue === 'number') {
-                if (parseInt(input) < minValue) {
-                    return ValidationResult.minValue;
-                }
-            }
-            break;
-        case 'decimal': {
-            const precision = getDecimalPrecision(qItem);
-            const decimalValue = precision
-                ? parseDecimalStringToFloat(input, precision)
-                : parseFloat(input);
-            if (typeof minValue === 'number') {
-                if (decimalValue < minValue) {
-                    return ValidationResult.minValue;
-                }
-            }
-            break;
-        }
-        case 'date':
-            if (typeof minValue === 'string') {
-                if (new Date(input) < new Date(minValue)) {
-                    return ValidationResult.minValue;
-                }
-            }
-            break;
-        case 'dateTime':
-            if (typeof minValue === 'string') {
-                if (dayjs(input).isBefore(dayjs(minValue))) {
-                    return ValidationResult.minValue;
-                }
-            }
-            break;
-        default:
-            return null;
-    }
-    return null;
-}
-function checkMaxValue(qItem, input, maxValue) {
-    switch (qItem.type) {
-        case 'integer':
-            if (typeof maxValue === 'number') {
-                if (parseInt(input) > maxValue) {
-                    return ValidationResult.maxValue;
-                }
-            }
-            break;
-        case 'decimal': {
-            const precision = getDecimalPrecision(qItem);
-            const decimalValue = precision
-                ? parseDecimalStringToFloat(input, precision)
-                : parseFloat(input);
-            if (typeof maxValue === 'number') {
-                if (decimalValue > maxValue) {
-                    return ValidationResult.maxValue;
-                }
-            }
-            break;
-        }
-        case 'date':
-            if (typeof maxValue === 'string') {
-                if (new Date(input) > new Date(maxValue)) {
-                    return ValidationResult.maxValue;
-                }
-            }
-            break;
-        case 'dateTime':
-            if (typeof maxValue === 'string') {
-                if (dayjs(input).isAfter(dayjs(maxValue))) {
-                    return ValidationResult.maxValue;
-                }
-            }
-            break;
-        default:
-            return null;
-    }
-    return null;
-}
-function createValidationOperationOutcome(error, qItem, qrItem, answerIndex, locationExpression, existingOperationOutcomeIssues = []) {
-    return {
-        resourceType: 'OperationOutcome',
-        issue: existingOperationOutcomeIssues.concat(createValidationOperationOutcomeIssue(error, qItem, qrItem, answerIndex, locationExpression))
-    };
-}
-function createValidationOperationOutcomeIssue(error, qItem, qrItem, answerIndex, locationExpression) {
-    var _a, _b, _c, _d, _e, _f, _g, _h, _j, _k, _l;
-    const errorCodeSystem = 'http://fhir.forms-lab.com/CodeSystem/errors';
-    let detailsText = '';
-    let fieldDisplayText = (_d = (_c = (_b = (_a = qrItem === null || qrItem === void 0 ? void 0 : qrItem.text) !== null && _a !== void 0 ? _a : getShortText(qItem)) !== null && _b !== void 0 ? _b : qItem === null || qItem === void 0 ? void 0 : qItem.text) !== null && _c !== void 0 ? _c : qItem.linkId) !== null && _d !== void 0 ? _d : qrItem.linkId;
-    if (!fieldDisplayText && fieldDisplayText.endsWith(':')) {
-        fieldDisplayText = fieldDisplayText.substring(0, fieldDisplayText.length - 1);
-    }
-    answerIndex = answerIndex !== null && answerIndex !== void 0 ? answerIndex : 0;
-    // create operationOutcomeIssue based on error
-    switch (error) {
-        case ValidationResult.required: {
-            if (qItem.type === 'group') {
-                detailsText = `${fieldDisplayText}: Mandatory group does not have answer(s)`;
-            }
-            else {
-                detailsText = `${fieldDisplayText}: Mandatory field does not have an answer`;
-            }
-            return {
-                severity: 'error',
-                code: 'required',
-                expression: [locationExpression],
-                details: {
-                    coding: [
-                        {
-                            system: errorCodeSystem,
-                            code: error,
-                            display: 'Required'
-                        }
-                    ],
-                    text: detailsText
-                }
-            };
-        }
-        case ValidationResult.regex: {
-            detailsText = `${fieldDisplayText}: The value '${getInputInString((_e = qrItem.answer) === null || _e === void 0 ? void 0 : _e[answerIndex])}' does not match the defined format.`;
-            if (structuredDataCapture.getEntryFormat(qItem)) {
-                detailsText += ` ${structuredDataCapture.getEntryFormat(qItem)}`;
-            }
-            return {
-                severity: 'error',
-                code: 'invalid',
-                expression: [locationExpression],
-                details: {
-                    coding: [
-                        {
-                            system: errorCodeSystem,
-                            code: error,
-                            display: 'Invalid format'
-                        }
-                    ],
-                    text: detailsText
-                },
-                diagnostics: (_f = getRegexString(qItem)) !== null && _f !== void 0 ? _f : undefined
-            };
-        }
-        case ValidationResult.minLength: {
-            detailsText = `${fieldDisplayText}: Expected the minimum value ${structuredDataCapture.getMinLength(qItem)} characters, received '${getInputInString((_g = qrItem.answer) === null || _g === void 0 ? void 0 : _g[answerIndex])}'`;
-            return {
-                severity: 'error',
-                code: 'business-rule',
-                expression: [locationExpression],
-                details: {
-                    coding: [
-                        {
-                            system: errorCodeSystem,
-                            code: error,
-                            display: 'Too short'
-                        }
-                    ],
-                    text: detailsText
-                }
-            };
-        }
-        case ValidationResult.maxLength: {
-            detailsText = `${fieldDisplayText}: Exceeded maximum of  ${qItem.maxLength} characters, received '${getInputInString((_h = qrItem.answer) === null || _h === void 0 ? void 0 : _h[answerIndex])}'`;
-            return {
-                severity: 'error',
-                code: 'business-rule',
-                expression: [locationExpression],
-                details: {
-                    coding: [
-                        {
-                            system: errorCodeSystem,
-                            code: error,
-                            display: 'Too long'
-                        }
-                    ],
-                    text: detailsText
-                }
-            };
-        }
-        case ValidationResult.maxDecimalPlaces: {
-            detailsText = `${fieldDisplayText}: Exceeded maximum decimal places ${structuredDataCapture.getMaxDecimalPlaces(qItem)}, received '${getInputInString((_j = qrItem.answer) === null || _j === void 0 ? void 0 : _j[answerIndex])}'`;
-            return {
-                severity: 'error',
-                code: 'business-rule',
-                expression: [locationExpression],
-                details: {
-                    coding: [
-                        {
-                            system: errorCodeSystem,
-                            code: error,
-                            display: 'Too precise'
-                        }
-                    ],
-                    text: detailsText
-                }
-            };
-        }
-        case ValidationResult.minValue: {
-            detailsText = `${fieldDisplayText}: Expected the minimum value ${getMinValue(qItem)}, received '${getInputInString((_k = qrItem.answer) === null || _k === void 0 ? void 0 : _k[answerIndex])}'`;
-            return {
-                severity: 'error',
-                code: 'business-rule',
-                expression: [locationExpression],
-                details: {
-                    coding: [
-                        {
-                            system: errorCodeSystem,
-                            code: error,
-                            display: 'Too small'
-                        }
-                    ],
-                    text: detailsText
-                }
-            };
-        }
-        case ValidationResult.maxValue: {
-            detailsText = `${fieldDisplayText}: Exceeded the maximum value ${getMaxValue(qItem)}, received '${getInputInString((_l = qrItem.answer) === null || _l === void 0 ? void 0 : _l[answerIndex])}'`;
-            return {
-                severity: 'error',
-                code: 'business-rule',
-                expression: [locationExpression],
-                details: {
-                    coding: [
-                        {
-                            system: errorCodeSystem,
-                            code: error,
-                            display: 'Too big'
-                        }
-                    ],
-                    text: detailsText
-                }
-            };
-        }
-        // mark unknown issues as fatal
-        default: {
-            return {
-                severity: 'error',
-                code: 'unknown',
-                expression: [locationExpression],
-                details: {
-                    coding: [
-                        {
-                            system: errorCodeSystem,
-                            code: 'unknown',
-                            display: 'Unknown'
-                        }
-                    ]
-                }
-            };
-        }
-    }
-}
-//# sourceMappingURL=validateQuestionnaire.js.map

package/lib/src/utils/validateQuestionnaire.js.map

@@ -1 +0,0 @@
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package/lib/src/utils/valueSet.d.ts

@@ -1,22 +0,0 @@
-import type { Coding, Encounter, Expression, FhirResource, Patient, Practitioner, QuestionnaireItem, ValueSet } from 'fhir/r4';
-import type { FhirResourceString } from '../interfaces/populate.interface';
-import type { VariableXFhirQuery } from '../interfaces/variables.interface';
-import type { ValidateCodeResponse, ValueSetPromise } from '../interfaces/valueSet.interface';
-export declare function getTerminologyServerUrl(qItem: QuestionnaireItem): string | undefined;
-export declare function getValueSetPromise(url: string, terminologyServerUrl: string): Promise<ValueSet>;
-export declare function validateCodePromise(url: string, system: string, code: string, terminologyServerUrl: string): Promise<ValidateCodeResponse | null>;
-export declare function resolveValueSetPromises(valueSetPromises: Record<string, ValueSetPromise>): Promise<Record<string, ValueSetPromise>>;
-/**
- * Sets an array of codings with the values from a valueSet
- *
- * @author Sean Fong
- */
-export declare function getValueSetCodings(valueSet: ValueSet): Coding[];
-/**
- * Evaluate valueSets in answerExpression with fhirpath
- *
- * @author Sean Fong
- */
-export declare function evaluateAnswerExpressionValueSet(answerExpression: Expression, itemLevelVariables: Expression[], preprocessedCodings: Record<string, Coding[]>): Coding[];
-export declare function createValueSetToXFhirQueryVariableNameMap(variables: Record<string, VariableXFhirQuery>): Record<string, string>;
-export declare function getResourceFromLaunchContext(resourceType: FhirResourceString, patient: Patient | null, user: Practitioner | null, encounter: Encounter | null): FhirResource | null;