@aehrc/smart-forms-renderer 0.45.0 → 0.45.1

package/lib/src/utils/questionnaireStoreUtils/addAdditionalVariables.js

@@ -1,43 +0,0 @@
-/*
- * Copyright 2024 Commonwealth Scientific and Industrial Research
- * Organisation (CSIRO) ABN 41 687 119 230.
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- *     http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-export function addAdditionalVariables(existingVariables, additionalVariables) {
-    for (const key in additionalVariables) {
-        const variable = additionalVariables[key];
-        if (variable && isVariable(variable)) {
-            const expression = variable.valueExpression;
-            if (expression && expression.language && expression.name) {
-                if (expression.language === 'text/fhirpath') {
-                    existingVariables.fhirPathVariables['QuestionnaireLevel'].push(expression);
-                }
-                else if (expression.language === 'application/x-fhir-query') {
-                    existingVariables.xFhirQueryVariables[expression.name] = {
-                        valueExpression: expression
-                    };
-                }
-            }
-        }
-    }
-    return existingVariables;
-}
-function isVariable(variable) {
-    var _a, _b;
-    const v = variable;
-    return ((v.url === 'http://hl7.org/fhir/StructureDefinition/variable' &&
-        ((_a = v.valueExpression) === null || _a === void 0 ? void 0 : _a.language) === 'text/fhirpath') ||
-        ((_b = v.valueExpression) === null || _b === void 0 ? void 0 : _b.language) === 'application/x-fhir-query');
-}
-//# sourceMappingURL=addAdditionalVariables.js.map

package/lib/src/utils/questionnaireStoreUtils/addAdditionalVariables.js.map

@@ -1 +0,0 @@
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package/lib/src/utils/questionnaireStoreUtils/addDisplayToCodings.d.ts

@@ -1,15 +0,0 @@
-import type { Coding, QuestionnaireItemAnswerOption } from 'fhir/r4';
-import type { CodeSystemLookupPromise } from '../../interfaces/lookup.interface';
-export declare function addDisplayToProcessedCodings(processedCodings: Record<string, Coding[]>, terminologyServerUrl: string): Promise<Record<string, Coding[]>>;
-export declare function addDisplayToAnswerOptions(answerOptions: Record<string, QuestionnaireItemAnswerOption[]>, terminologyServerUrl: string): Promise<Record<string, QuestionnaireItemAnswerOption[]>>;
-export declare function addDisplayToCodingArray(codings: Coding[], terminologyServerUrl: string): Promise<Coding[]>;
-export declare function getCodeSystemLookupPromise(query: string, terminologyServerUrl: string): Promise<any>;
-export declare function resolveLookupPromises(codeSystemLookupPromises: Record<string, CodeSystemLookupPromise>): Promise<Record<string, CodeSystemLookupPromise>>;
-export interface LookupResponse {
-    parameter: [DisplayParameter];
-}
-export interface DisplayParameter {
-    name: 'display';
-    valueString: string;
-}
-export declare function lookupResponseIsValid(response: any): response is LookupResponse;

package/lib/src/utils/questionnaireStoreUtils/addDisplayToCodings.js

@@ -1,160 +0,0 @@
-/*
- * Copyright 2024 Commonwealth Scientific and Industrial Research
- * Organisation (CSIRO) ABN 41 687 119 230.
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- *     http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, generator) {
-    function adopt(value) { return value instanceof P ? value : new P(function (resolve) { resolve(value); }); }
-    return new (P || (P = Promise))(function (resolve, reject) {
-        function fulfilled(value) { try { step(generator.next(value)); } catch (e) { reject(e); } }
-        function rejected(value) { try { step(generator["throw"](value)); } catch (e) { reject(e); } }
-        function step(result) { result.done ? resolve(result.value) : adopt(result.value).then(fulfilled, rejected); }
-        step((generator = generator.apply(thisArg, _arguments || [])).next());
-    });
-};
-import * as FHIR from 'fhirclient';
-// Use this for QuestionnaireStore.ProcessedCodings
-export function addDisplayToProcessedCodings(processedCodings, terminologyServerUrl) {
-    return __awaiter(this, void 0, void 0, function* () {
-        var _a;
-        // Store code system lookup promises for codings without displays
-        const codeSystemLookupPromises = {};
-        for (const key in processedCodings) {
-            const codings = processedCodings[key];
-            for (const coding of codings) {
-                if (!coding.display) {
-                    const query = `system=${coding.system}&code=${coding.code}`;
-                    codeSystemLookupPromises[query] = {
-                        promise: getCodeSystemLookupPromise(query, terminologyServerUrl),
-                        oldCoding: coding
-                    };
-                }
-            }
-        }
-        // Resolves lookup promises in one go and assign newCodings to processedCodings
-        const resolvedCodeSystemLookupPromises = yield resolveLookupPromises(codeSystemLookupPromises);
-        for (const key in processedCodings) {
-            const codings = processedCodings[key];
-            for (const coding of codings) {
-                const lookUpKey = `system=${coding.system}&code=${coding.code}`;
-                const resolvedLookup = resolvedCodeSystemLookupPromises[lookUpKey];
-                if ((_a = resolvedLookup === null || resolvedLookup === void 0 ? void 0 : resolvedLookup.newCoding) === null || _a === void 0 ? void 0 : _a.display) {
-                    coding.display = resolvedLookup.newCoding.display;
-                }
-            }
-        }
-        return processedCodings;
-    });
-}
-// Use this for a Record<linkId, answerOption[]>
-export function addDisplayToAnswerOptions(answerOptions, terminologyServerUrl) {
-    return __awaiter(this, void 0, void 0, function* () {
-        var _a;
-        // Store code system lookup promises for codings without displays
-        const codeSystemLookupPromises = {};
-        for (const key in answerOptions) {
-            const options = answerOptions[key];
-            for (const option of options) {
-                if (option.valueCoding && !option.valueCoding.display) {
-                    const query = `system=${option.valueCoding.system}&code=${option.valueCoding.code}`;
-                    codeSystemLookupPromises[query] = {
-                        promise: getCodeSystemLookupPromise(query, terminologyServerUrl),
-                        oldCoding: option.valueCoding
-                    };
-                }
-            }
-        }
-        // Resolves lookup promises in one go and assign newCodings to processedCodings
-        const resolvedCodeSystemLookupPromises = yield resolveLookupPromises(codeSystemLookupPromises);
-        for (const key in answerOptions) {
-            const options = answerOptions[key];
-            for (const option of options) {
-                if (option.valueCoding) {
-                    const lookUpKey = `system=${option.valueCoding.system}&code=${option.valueCoding.code}`;
-                    const resolvedLookup = resolvedCodeSystemLookupPromises[lookUpKey];
-                    if ((_a = resolvedLookup === null || resolvedLookup === void 0 ? void 0 : resolvedLookup.newCoding) === null || _a === void 0 ? void 0 : _a.display) {
-                        option.valueCoding.display = resolvedLookup.newCoding.display;
-                    }
-                }
-            }
-        }
-        return answerOptions;
-    });
-}
-// Use this for an array of codings
-export function addDisplayToCodingArray(codings, terminologyServerUrl) {
-    return __awaiter(this, void 0, void 0, function* () {
-        var _a;
-        // Store code system lookup promises for codings without displays
-        const codeSystemLookupPromises = {};
-        for (const coding of codings) {
-            if (!coding.display) {
-                const query = `system=${coding.system}&code=${coding.code}`;
-                codeSystemLookupPromises[query] = {
-                    promise: getCodeSystemLookupPromise(query, terminologyServerUrl),
-                    oldCoding: coding
-                };
-            }
-        }
-        // Resolves lookup promises in one go and assign newCodings to processedCodings
-        const resolvedCodeSystemLookupPromises = yield resolveLookupPromises(codeSystemLookupPromises);
-        for (const coding of codings) {
-            const lookUpKey = `system=${coding.system}&code=${coding.code}`;
-            const resolvedLookup = resolvedCodeSystemLookupPromises[lookUpKey];
-            if ((_a = resolvedLookup === null || resolvedLookup === void 0 ? void 0 : resolvedLookup.newCoding) === null || _a === void 0 ? void 0 : _a.display) {
-                coding.display = resolvedLookup.newCoding.display;
-            }
-        }
-        return codings;
-    });
-}
-export function getCodeSystemLookupPromise(query, terminologyServerUrl) {
-    return FHIR.client({ serverUrl: terminologyServerUrl }).request({
-        url: `CodeSystem/$lookup?${query}`
-    });
-}
-export function resolveLookupPromises(codeSystemLookupPromises) {
-    return __awaiter(this, void 0, void 0, function* () {
-        var _a, _b;
-        const newCodeSystemLookupPromises = {};
-        const lookupPromiseKeys = Object.keys(codeSystemLookupPromises);
-        const lookupPromiseValues = Object.values(codeSystemLookupPromises);
-        const promises = lookupPromiseValues.map((lookupPromise) => lookupPromise.promise);
-        const settledPromises = yield Promise.allSettled(promises);
-        for (const [i, settledPromise] of settledPromises.entries()) {
-            if (settledPromise.status === 'rejected') {
-                continue;
-            }
-            const lookupResult = settledPromise.value;
-            if (!lookupResponseIsValid(lookupResult)) {
-                continue;
-            }
-            const key = lookupPromiseKeys[i];
-            const lookupPromise = lookupPromiseValues[i];
-            if (key && lookupPromise) {
-                lookupPromise.newCoding = Object.assign(Object.assign({}, lookupPromise.oldCoding), { display: (_b = (_a = lookupResult.parameter.find((p) => p.name === 'display')) === null || _a === void 0 ? void 0 : _a.valueString) !== null && _b !== void 0 ? _b : undefined });
-                newCodeSystemLookupPromises[key] = lookupPromise;
-            }
-        }
-        return newCodeSystemLookupPromises;
-    });
-}
-export function lookupResponseIsValid(response) {
-    return (response &&
-        response.resourceType === 'Parameters' &&
-        response.parameter &&
-        response.parameter.find((p) => p.name === 'display') &&
-        response.parameter.find((p) => p.name === 'display').valueString);
-}
-//# sourceMappingURL=addDisplayToCodings.js.map

package/lib/src/utils/questionnaireStoreUtils/addDisplayToCodings.js.map

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package/lib/src/utils/questionnaireStoreUtils/createQuestionaireModel.d.ts

@@ -1,3 +0,0 @@
-import type { Questionnaire } from 'fhir/r4';
-import type { QuestionnaireModel } from '../../interfaces/questionnaireStore.interface';
-export declare function createQuestionnaireModel(questionnaire: Questionnaire, additionalVariables: Record<string, object>, terminologyServerUrl: string): Promise<QuestionnaireModel>;

package/lib/src/utils/questionnaireStoreUtils/createQuestionaireModel.js

@@ -1,101 +0,0 @@
-/*
- * Copyright 2024 Commonwealth Scientific and Industrial Research
- * Organisation (CSIRO) ABN 41 687 119 230.
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- *     http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, generator) {
-    function adopt(value) { return value instanceof P ? value : new P(function (resolve) { resolve(value); }); }
-    return new (P || (P = Promise))(function (resolve, reject) {
-        function fulfilled(value) { try { step(generator.next(value)); } catch (e) { reject(e); } }
-        function rejected(value) { try { step(generator["throw"](value)); } catch (e) { reject(e); } }
-        function step(result) { result.done ? resolve(result.value) : adopt(result.value).then(fulfilled, rejected); }
-        step((generator = generator.apply(thisArg, _arguments || [])).next());
-    });
-};
-import { extractLaunchContexts } from './extractLaunchContext';
-import { extractQuestionnaireLevelVariables } from './extractVariables';
-import { extractTabs } from './extractTabs';
-import { extractPages } from './extractPages';
-import { extractContainedValueSets } from './extractContainedValueSets';
-import { extractOtherExtensions } from './extractOtherExtensions';
-import { resolveValueSets } from './resolveValueSets';
-import { addAdditionalVariables } from './addAdditionalVariables';
-import { getLinkIdPreferredTerminologyServerTuples, getLinkIdTypeTuples } from '../qItem';
-import { addDisplayToAnswerOptions, addDisplayToProcessedCodings } from './addDisplayToCodings';
-export function createQuestionnaireModel(questionnaire, additionalVariables, terminologyServerUrl) {
-    return __awaiter(this, void 0, void 0, function* () {
-        if (!questionnaire.item) {
-            return createEmptyModel();
-        }
-        const itemTypes = Object.fromEntries(getLinkIdTypeTuples(questionnaire));
-        const itemPreferredTerminologyServers = Object.fromEntries(getLinkIdPreferredTerminologyServerTuples(questionnaire));
-        const tabs = extractTabs(questionnaire);
-        const pages = extractPages(questionnaire);
-        const launchContexts = extractLaunchContexts(questionnaire);
-        let variables = extractQuestionnaireLevelVariables(questionnaire);
-        variables = addAdditionalVariables(variables, additionalVariables);
-        const extractContainedValueSetsResult = extractContainedValueSets(questionnaire, terminologyServerUrl);
-        let valueSetPromises = extractContainedValueSetsResult.valueSetPromises;
-        let processedValueSetCodings = extractContainedValueSetsResult.processedValueSetCodings;
-        const processedValueSetUrls = extractContainedValueSetsResult.processedValueSetUrls;
-        const extractOtherExtensionsResult = extractOtherExtensions(questionnaire, variables, valueSetPromises, itemPreferredTerminologyServers, terminologyServerUrl);
-        const { enableWhenItems, enableWhenExpressions, calculatedExpressions, initialExpressions, answerExpressions, answerOptions } = extractOtherExtensionsResult;
-        variables = extractOtherExtensionsResult.variables;
-        valueSetPromises = extractOtherExtensionsResult.valueSetPromises;
-        const resolveValueSetsResult = yield resolveValueSets(variables, valueSetPromises, processedValueSetCodings, terminologyServerUrl);
-        variables = resolveValueSetsResult.variables;
-        processedValueSetCodings = resolveValueSetsResult.processedValueSetCodings;
-        // In processedCodings, add display values to codings lacking them
-        processedValueSetCodings = yield addDisplayToProcessedCodings(processedValueSetCodings, terminologyServerUrl);
-        // In answerOptions, add display values to codings lacking them
-        const completeAnswerOptions = yield addDisplayToAnswerOptions(answerOptions, terminologyServerUrl);
-        return {
-            itemTypes,
-            itemPreferredTerminologyServers,
-            tabs,
-            pages,
-            variables,
-            launchContexts,
-            enableWhenItems,
-            enableWhenExpressions,
-            calculatedExpressions,
-            initialExpressions,
-            answerExpressions,
-            answerOptions: completeAnswerOptions,
-            processedValueSetCodings,
-            processedValueSetUrls,
-            fhirPathContext: {}
-        };
-    });
-}
-function createEmptyModel() {
-    return {
-        itemTypes: {},
-        itemPreferredTerminologyServers: {},
-        tabs: {},
-        pages: {},
-        variables: { fhirPathVariables: {}, xFhirQueryVariables: {} },
-        launchContexts: {},
-        calculatedExpressions: {},
-        initialExpressions: {},
-        enableWhenExpressions: { singleExpressions: {}, repeatExpressions: {} },
-        answerExpressions: {},
-        answerOptions: {},
-        enableWhenItems: { singleItems: {}, repeatItems: {} },
-        processedValueSetCodings: {},
-        processedValueSetUrls: {},
-        fhirPathContext: {}
-    };
-}
-//# sourceMappingURL=createQuestionaireModel.js.map

package/lib/src/utils/questionnaireStoreUtils/createQuestionaireModel.js.map

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package/lib/src/utils/questionnaireStoreUtils/extractContainedValueSets.d.ts

@@ -1,13 +0,0 @@
-import type { ValueSetPromise } from '../../interfaces/valueSet.interface';
-import type { Coding, Questionnaire, ValueSet } from 'fhir/r4';
-export declare function extractContainedValueSets(questionnaire: Questionnaire, terminologyServerUrl: string): {
-    processedValueSetCodings: Record<string, Coding[]>;
-    processedValueSetUrls: Record<string, string>;
-    valueSetPromises: Record<string, ValueSetPromise>;
-};
-/**
- * Sets an array of codings with the values from a valueSet
- *
- * @author Sean Fong
- */
-export declare function getValueSetUrlFromContained(valueSet: ValueSet): string;

package/lib/src/utils/questionnaireStoreUtils/extractContainedValueSets.js

@@ -1,59 +0,0 @@
-/*
- * Copyright 2024 Commonwealth Scientific and Industrial Research
- * Organisation (CSIRO) ABN 41 687 119 230.
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- *     http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-import { getValueSetCodings, getValueSetPromise } from '../valueSet';
-export function extractContainedValueSets(questionnaire, terminologyServerUrl) {
-    if (!questionnaire.contained || questionnaire.contained.length === 0) {
-        return { processedValueSetCodings: {}, processedValueSetUrls: {}, valueSetPromises: {} };
-    }
-    // Process contained ValueSets
-    const processedValueSetCodings = {};
-    const processedValueSetUrls = {};
-    const valueSetPromises = {};
-    for (const entry of questionnaire.contained) {
-        if (entry.resourceType !== 'ValueSet' || !entry.id) {
-            continue;
-        }
-        if (entry.expansion) {
-            // Store contained valueSet codings
-            processedValueSetCodings[entry.id] = getValueSetCodings(entry);
-            continue;
-        }
-        // Add unexpanded contained ValueSets to valueSetPromiseMap
-        const valueSetUrl = getValueSetUrlFromContained(entry);
-        if (valueSetUrl) {
-            valueSetPromises[entry.id] = {
-                promise: getValueSetPromise(valueSetUrl, terminologyServerUrl)
-            };
-            continue;
-        }
-        if (entry.url) {
-            processedValueSetUrls[entry.id] = entry.url;
-        }
-    }
-    return { processedValueSetCodings, processedValueSetUrls, valueSetPromises };
-}
-/**
- * Sets an array of codings with the values from a valueSet
- *
- * @author Sean Fong
- */
-export function getValueSetUrlFromContained(valueSet) {
-    var _a, _b;
-    const urls = (_b = (_a = valueSet.compose) === null || _a === void 0 ? void 0 : _a.include) === null || _b === void 0 ? void 0 : _b.map((include) => { var _a; return ((_a = include.valueSet) === null || _a === void 0 ? void 0 : _a[0]) ? include.valueSet[0] : ''; });
-    return urls && urls.length > 0 ? urls[0] : '';
-}
-//# sourceMappingURL=extractContainedValueSets.js.map

package/lib/src/utils/questionnaireStoreUtils/extractContainedValueSets.js.map

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package/lib/src/utils/questionnaireStoreUtils/extractLaunchContext.d.ts

@@ -1,3 +0,0 @@
-import type { Questionnaire } from 'fhir/r4';
-import type { LaunchContext } from '../../interfaces/populate.interface';
-export declare function extractLaunchContexts(questionnaire: Questionnaire): Record<string, LaunchContext>;

package/lib/src/utils/questionnaireStoreUtils/extractLaunchContext.js

@@ -1,18 +0,0 @@
-import { isLaunchContext } from '../populateContexts';
-export function extractLaunchContexts(questionnaire) {
-    var _a, _b;
-    if (!questionnaire.extension || questionnaire.extension.length === 0) {
-        return {};
-    }
-    const launchContexts = {};
-    for (const ext of questionnaire.extension) {
-        if (isLaunchContext(ext)) {
-            const launchContextName = (_a = ext.extension[0].valueId) !== null && _a !== void 0 ? _a : (_b = ext.extension[0].valueCoding) === null || _b === void 0 ? void 0 : _b.code;
-            if (launchContextName) {
-                launchContexts[launchContextName] = ext;
-            }
-        }
-    }
-    return launchContexts;
-}
-//# sourceMappingURL=extractLaunchContext.js.map

package/lib/src/utils/questionnaireStoreUtils/extractLaunchContext.js.map

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package/lib/src/utils/questionnaireStoreUtils/extractOtherExtensions.d.ts

@@ -1,35 +0,0 @@
-import type { Questionnaire, QuestionnaireItem, QuestionnaireItemAnswerOption, QuestionnaireItemEnableWhen } from 'fhir/r4';
-import type { CalculatedExpression } from '../../interfaces/calculatedExpression.interface';
-import type { EnableWhenExpressions, EnableWhenItems, EnableWhenRepeatItemProperties, EnableWhenSingleItemProperties } from '../../interfaces/enableWhen.interface';
-import type { AnswerExpression } from '../../interfaces/answerExpression.interface';
-import type { ValueSetPromise } from '../../interfaces/valueSet.interface';
-import type { Variables } from '../../interfaces/variables.interface';
-import type { InitialExpression } from '../../interfaces/initialExpression.interface';
-interface ReturnParamsRecursive {
-    variables: Variables;
-    enableWhenItems: EnableWhenItems;
-    enableWhenExpressions: EnableWhenExpressions;
-    calculatedExpressions: Record<string, CalculatedExpression[]>;
-    initialExpressions: Record<string, InitialExpression>;
-    answerExpressions: Record<string, AnswerExpression>;
-    valueSetPromises: Record<string, ValueSetPromise>;
-    answerOptions: Record<string, QuestionnaireItemAnswerOption[]>;
-}
-export declare function extractOtherExtensions(questionnaire: Questionnaire, variables: Variables, valueSetPromises: Record<string, ValueSetPromise>, itemPreferredTerminologyServers: Record<string, string>, terminologyServerUrl: string): ReturnParamsRecursive;
-/**
- * Get enableWhen items' linked items and enableBehaviour attribute and save them in an EnableWhenItemProperties object
- *
- * @author Sean Fong
- */
-export declare function initialiseEnableWhenItemProperties(qItem: QuestionnaireItem, questionnaire: Questionnaire, parentLinkId?: string): {
-    enableWhenItemType: 'single' | 'repeat';
-    enableWhenItemProperties: EnableWhenSingleItemProperties | EnableWhenRepeatItemProperties;
-} | null;
-export declare function initialiseEnableWhenRepeatItemProperties(qItem: QuestionnaireItem, enableWhen: QuestionnaireItemEnableWhen[], questionnaire: Questionnaire, parentLinkId: string): EnableWhenRepeatItemProperties | null;
-/**
- * Get enableWhen items' linked items and enableBehaviour attribute and save them in an EnableWhenItemProperties object
- *
- * @author Sean Fong
- */
-export declare function initialiseEnableWhenSingleItemProperties(qItem: QuestionnaireItem, enableWhen: QuestionnaireItemEnableWhen[]): EnableWhenSingleItemProperties;
-export {};