@aehrc/smart-forms-renderer 0.4.0 → 0.6.0

package/src/utils/questionnaireStoreUtils/extractTabs.js

@@ -1,31 +0,0 @@
-/*
- * Copyright 2023 Commonwealth Scientific and Industrial Research
- * Organisation (CSIRO) ABN 41 687 119 230.
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- *     http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-import { constructTabsWithProperties, isTabContainer } from '../tabs';
-export function extractTabs(questionnaire) {
-    if (!questionnaire.item || questionnaire.item.length === 0) {
-        return {};
-    }
-    let totalTabs = {};
-    for (const topLevelItem of questionnaire.item) {
-        const items = topLevelItem.item;
-        const topLevelItemIsTabContainer = isTabContainer(topLevelItem);
-        const tabs = constructTabsWithProperties(items, topLevelItemIsTabContainer);
-        totalTabs = Object.assign(Object.assign({}, totalTabs), tabs);
-    }
-    return totalTabs;
-}
-//# sourceMappingURL=extractTabs.js.map

package/src/utils/questionnaireStoreUtils/extractTabs.js.map

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package/src/utils/questionnaireStoreUtils/extractVariables.js

@@ -1,63 +0,0 @@
-/*
- * Copyright 2023 Commonwealth Scientific and Industrial Research
- * Organisation (CSIRO) ABN 41 687 119 230.
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- *     http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-export function extractQuestionnaireLevelVariables(questionnaire) {
-    const variables = { fhirPathVariables: {}, xFhirQueryVariables: {} };
-    variables.fhirPathVariables['QuestionnaireLevel'] = [];
-    if (!questionnaire.extension || questionnaire.extension.length === 0) {
-        return variables;
-    }
-    variables.fhirPathVariables['QuestionnaireLevel'] = getFhirPathVariables(questionnaire.extension);
-    for (const exp of getXFhirQueryVariables(questionnaire.extension)) {
-        if (exp.name) {
-            variables.xFhirQueryVariables[exp.name] = {
-                valueExpression: exp
-            };
-        }
-    }
-    return variables;
-}
-/**
- * Get fhirpath variables from an array of extensions
- *
- * @author Sean Fong
- */
-export function getFhirPathVariables(extensions) {
-    return (extensions
-        .filter((extension) => {
-        var _a;
-        return extension.url === 'http://hl7.org/fhir/StructureDefinition/variable' &&
-            ((_a = extension.valueExpression) === null || _a === void 0 ? void 0 : _a.language) === 'text/fhirpath';
-    })
-        // eslint-disable-next-line @typescript-eslint/no-non-null-assertion
-        .map((extension) => extension.valueExpression));
-}
-/**
- * Get x-fhir-query variables from an array of extensions
- *
- * @author Sean Fong
- */
-export function getXFhirQueryVariables(extensions) {
-    return (extensions
-        .filter((extension) => {
-        var _a;
-        return extension.url === 'http://hl7.org/fhir/StructureDefinition/variable' &&
-            ((_a = extension.valueExpression) === null || _a === void 0 ? void 0 : _a.language) === 'application/x-fhir-query';
-    })
-        // eslint-disable-next-line @typescript-eslint/no-non-null-assertion
-        .map((extension) => extension.valueExpression));
-}
-//# sourceMappingURL=extractVariables.js.map

package/src/utils/questionnaireStoreUtils/extractVariables.js.map

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package/src/utils/questionnaireStoreUtils/resolveValueSets.js

@@ -1,58 +0,0 @@
-/*
- * Copyright 2023 Commonwealth Scientific and Industrial Research
- * Organisation (CSIRO) ABN 41 687 119 230.
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- *     http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, generator) {
-    function adopt(value) { return value instanceof P ? value : new P(function (resolve) { resolve(value); }); }
-    return new (P || (P = Promise))(function (resolve, reject) {
-        function fulfilled(value) { try { step(generator.next(value)); } catch (e) { reject(e); } }
-        function rejected(value) { try { step(generator["throw"](value)); } catch (e) { reject(e); } }
-        function step(result) { result.done ? resolve(result.value) : adopt(result.value).then(fulfilled, rejected); }
-        step((generator = generator.apply(thisArg, _arguments || [])).next());
-    });
-};
-import { createValueSetToXFhirQueryVariableNameMap, getValueSetCodings, getValueSetPromise, resolvePromises } from '../valueSet';
-export function resolveValueSets(variables, valueSetPromises, processedValueSetCodings) {
-    return __awaiter(this, void 0, void 0, function* () {
-        // Create a <valueSetUrl, XFhirQueryVariableName> map
-        const valueSetToXFhirQueryVariableNameMap = createValueSetToXFhirQueryVariableNameMap(variables.xFhirQueryVariables);
-        if (Object.keys(valueSetToXFhirQueryVariableNameMap).length > 0) {
-            for (const valueSetUrl in valueSetToXFhirQueryVariableNameMap) {
-                valueSetPromises[valueSetUrl] = {
-                    promise: getValueSetPromise(valueSetUrl)
-                };
-            }
-        }
-        // Resolve promises and store valueSet codings in preprocessedValueSetCodings AND XFhirQueryVariables
-        const resolvedPromises = yield resolvePromises(valueSetPromises);
-        for (const valueSetUrl in resolvedPromises) {
-            const valueSet = resolvedPromises[valueSetUrl].valueSet;
-            if (valueSet) {
-                if (valueSetToXFhirQueryVariableNameMap[valueSetUrl]) {
-                    // valueSetUrl is in x-fhir-query variables, save to variable
-                    const variableName = valueSetToXFhirQueryVariableNameMap[valueSetUrl];
-                    const variable = variables.xFhirQueryVariables[variableName];
-                    variables.xFhirQueryVariables[variableName] = Object.assign(Object.assign({}, variable), { result: resolvedPromises[valueSetUrl].valueSet });
-                }
-                else {
-                    // valueSetUrl is in x-fhir-query variables, save to preprocessedValueSetCodings
-                    processedValueSetCodings[valueSetUrl] = getValueSetCodings(valueSet);
-                }
-            }
-        }
-        return { variables, processedValueSetCodings };
-    });
-}
-//# sourceMappingURL=resolveValueSets.js.map

package/src/utils/questionnaireStoreUtils/resolveValueSets.js.map

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package/src/utils/tabs.js

@@ -1,190 +0,0 @@
-/*
- * Copyright 2023 Commonwealth Scientific and Industrial Research
- * Organisation (CSIRO) ABN 41 687 119 230.
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- *     http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-import { hasHiddenExtension, isSpecificItemControl } from './itemControl';
-import { isHiddenByEnableWhens } from './qItem';
-export function getFirstVisibleTab(tabs, enableWhenItems, enableWhenExpressions) {
-    return Object.entries(tabs)
-        .sort(([, tabA], [, tabB]) => tabA.tabIndex - tabB.tabIndex)
-        .findIndex(([tabLinkId, tab]) => {
-        if (tab.isHidden) {
-            return false;
-        }
-        if (enableWhenItems[tabLinkId]) {
-            return enableWhenItems[tabLinkId].isEnabled;
-        }
-        if (enableWhenExpressions[tabLinkId]) {
-            return enableWhenExpressions[tabLinkId].isEnabled;
-        }
-        return true;
-    });
-}
-/*
- * Copyright 2023 Commonwealth Scientific and Industrial Research
- * Organisation (CSIRO) ABN 41 687 119 230.
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- *     http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-/**
- * Checks if any of the items in a qItem array is a tabbed item
- * Returns true if there is at least one tabbed item
- *
- * @author Sean Fong
- */
-export function containsTabs(topLevelQItem) {
-    if (!topLevelQItem.item) {
-        return false;
-    }
-    const tabs = getTabbedItems(topLevelQItem.item);
-    return tabs.length > 0;
-}
-/**
- * Checks if a top-level QItem is a tab container
- * All items within a tab container are tabbed items
- *
- * @author Sean Fong
- */
-export function isTabContainer(topLevelQItem) {
-    return isSpecificItemControl(topLevelQItem, 'tab-container');
-}
-/**
- * Get tabbed items from a qItem array
- *
- * @author Sean Fong
- */
-export function getTabbedItems(items) {
-    return items.filter((i) => isTab(i));
-}
-/**
- * Check if a qItem is a tabbed item
- *
- * @author Sean Fong
- */
-export function isTab(item) {
-    var _a, _b, _c;
-    const itemControl = (_a = item.extension) === null || _a === void 0 ? void 0 : _a.find((e) => e.url === 'http://hl7.org/fhir/StructureDefinition/questionnaire-itemControl');
-    if (itemControl) {
-        const tabCoding = (_c = (_b = itemControl.valueCodeableConcept) === null || _b === void 0 ? void 0 : _b.coding) === null || _c === void 0 ? void 0 : _c.find((c) => c.code === 'tab');
-        if (tabCoding) {
-            return true;
-        }
-    }
-    return false;
-}
-/**
- * Create a <linkId, {isComplete: boolean}> key-value pair for all tabbed items in a qItem array
- *
- * @author Sean Fong
- */
-export function constructTabsWithProperties(qItems, hasTabContainer) {
-    if (!qItems)
-        return {};
-    const qItemTabs = hasTabContainer ? qItems : qItems.filter(isTab);
-    const tabs = {};
-    for (const [i, qItem] of qItemTabs.entries()) {
-        tabs[qItem.linkId] = {
-            tabIndex: i,
-            isComplete: false,
-            isHidden: hasHiddenExtension(qItem)
-        };
-    }
-    return tabs;
-}
-export function constructTabsWithVisibility(params) {
-    const { tabs, enableWhenIsActivated, enableWhenItems, enableWhenExpressions } = params;
-    return Object.entries(tabs).map(([linkId]) => {
-        const isVisible = !isHiddenByEnableWhens({
-            linkId,
-            enableWhenIsActivated,
-            enableWhenItems,
-            enableWhenExpressions
-        });
-        return {
-            linkId,
-            isVisible
-        };
-    });
-}
-/**
- * Get index of next visible tab
- *
- * @author Sean Fong
- */
-export function getNextVisibleTabIndex(params) {
-    const { tabs, currentTabIndex, enableWhenIsActivated, enableWhenItems, enableWhenExpressions } = params;
-    const tabsWithVisibility = constructTabsWithVisibility({
-        tabs,
-        enableWhenIsActivated,
-        enableWhenItems,
-        enableWhenExpressions
-    });
-    let nextTabIndex = currentTabIndex + 1;
-    const nextTabIndexIsVisible = false;
-    while (!nextTabIndexIsVisible) {
-        if (tabsWithVisibility[nextTabIndex].isVisible) {
-            return nextTabIndex;
-        }
-        nextTabIndex++;
-    }
-    return nextTabIndex;
-}
-/**
- *
- * Get index of first visible tab
- *
- * @author Sean Fong
- */
-export function getFirstVisibleTabIndex(tabs, enableWhenIsActivated, enableWhenItems, enableWhenExpressions) {
-    const tabsWithVisibility = constructTabsWithVisibility({
-        tabs,
-        enableWhenIsActivated,
-        enableWhenItems,
-        enableWhenExpressions
-    });
-    return tabsWithVisibility.findIndex((tab) => tab.isVisible);
-}
-/**
- *
- * Find number of visible tabs
- *
- * @author Sean Fong
- */
-export function findNumOfVisibleTabs(tabs, enableWhenIsActivated, enableWhenItems, enableWhenExpressions) {
-    const tabsWithVisibility = constructTabsWithVisibility({
-        tabs,
-        enableWhenIsActivated,
-        enableWhenItems,
-        enableWhenExpressions
-    });
-    return tabsWithVisibility.filter((tab) => tab.isVisible).length;
-}
-export function getContextDisplays(item) {
-    if (!item.item || item.item.length === 0) {
-        return [];
-    }
-    return item.item.filter((childItem) => isSpecificItemControl(childItem, 'context-display') && childItem.type === 'display');
-}
-//# sourceMappingURL=tabs.js.map

package/src/utils/tabs.js.map

@@ -1 +0,0 @@
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package/src/utils/valueSet.js

@@ -1,126 +0,0 @@
-/*
- * Copyright 2023 Commonwealth Scientific and Industrial Research
- * Organisation (CSIRO) ABN 41 687 119 230.
- *
- * Licensed under the Apache License, Version 2.0 (the "License");
- * you may not use this file except in compliance with the License.
- * You may obtain a copy of the License at
- *
- *     http://www.apache.org/licenses/LICENSE-2.0
- *
- * Unless required by applicable law or agreed to in writing, software
- * distributed under the License is distributed on an "AS IS" BASIS,
- * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
- * See the License for the specific language governing permissions and
- * limitations under the License.
- */
-var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, generator) {
-    function adopt(value) { return value instanceof P ? value : new P(function (resolve) { resolve(value); }); }
-    return new (P || (P = Promise))(function (resolve, reject) {
-        function fulfilled(value) { try { step(generator.next(value)); } catch (e) { reject(e); } }
-        function rejected(value) { try { step(generator["throw"](value)); } catch (e) { reject(e); } }
-        function step(result) { result.done ? resolve(result.value) : adopt(result.value).then(fulfilled, rejected); }
-        step((generator = generator.apply(thisArg, _arguments || [])).next());
-    });
-};
-import * as FHIR from 'fhirclient';
-const VALID_VALUE_SET_URL_REGEX = /https?:\/\/(www\.)?[-\w@:%.+~#=]{2,256}\.[a-z]{2,4}\b([-@\w:%+.~#?&/=]*ValueSet[-@\w:%+.~#?&/=]*)/;
-const VALID_FHIRPATH_VARIABLE_REGEX = /%(.*?)\./;
-const ONTOSERVER_ENDPOINT = 'https://r4.ontoserver.csiro.au/fhir/';
-export function getTerminologyServerUrl(qItem) {
-    var _a;
-    const itemControl = (_a = qItem.extension) === null || _a === void 0 ? void 0 : _a.find((extension) => extension.url === 'http://hl7.org/fhir/StructureDefinition/terminology-server');
-    if (itemControl) {
-        return itemControl.valueUrl;
-    }
-    return undefined;
-}
-export function getValueSetPromise(url, terminologyServer) {
-    let valueSetUrl = url;
-    if (url.includes('ValueSet/$expand?url=')) {
-        const splitUrl = url.split('ValueSet/$expand?url=');
-        terminologyServer = splitUrl[0];
-        valueSetUrl = splitUrl[1];
-    }
-    valueSetUrl = valueSetUrl.replace('|', '&version=');
-    return FHIR.client({ serverUrl: terminologyServer !== null && terminologyServer !== void 0 ? terminologyServer : ONTOSERVER_ENDPOINT }).request({
-        url: 'ValueSet/$expand?url=' + valueSetUrl
-    });
-}
-export function resolvePromises(valueSetPromises) {
-    return __awaiter(this, void 0, void 0, function* () {
-        const newValueSetPromises = {};
-        const valueSetPromiseKeys = Object.keys(valueSetPromises);
-        const valueSetPromiseValues = Object.values(valueSetPromises);
-        const promises = valueSetPromiseValues.map((valueSetPromise) => valueSetPromise.promise);
-        const settledPromises = yield Promise.allSettled(promises);
-        for (const [i, settledPromise] of settledPromises.entries()) {
-            // Only add valueSet if the promise was fulfilled
-            if (settledPromise.status === 'fulfilled') {
-                const valueSet = settledPromise.value;
-                const key = valueSetPromiseKeys[i];
-                const valueSetPromise = valueSetPromiseValues[i];
-                if (key && valueSetPromise) {
-                    valueSetPromise.valueSet = valueSet;
-                    newValueSetPromises[key] = valueSetPromise;
-                }
-            }
-        }
-        return newValueSetPromises;
-    });
-}
-/**
- * Sets an array of codings with the values from a valueSet
- *
- * @author Sean Fong
- */
-export function getValueSetCodings(valueSet) {
-    var _a, _b, _c;
-    return (_c = (_b = (_a = valueSet.expansion) === null || _a === void 0 ? void 0 : _a.contains) === null || _b === void 0 ? void 0 : _b.map((coding) => coding)) !== null && _c !== void 0 ? _c : [];
-}
-/**
- * Evaluate valueSets in answerExpression with fhirpath
- *
- * @author Sean Fong
- */
-export function evaluateAnswerExpressionValueSet(answerExpression, itemLevelVariables, preprocessedCodings) {
-    var _a;
-    const expression = answerExpression.expression;
-    if (!expression)
-        return [];
-    const match = expression.match(VALID_FHIRPATH_VARIABLE_REGEX);
-    const variableName = match === null || match === void 0 ? void 0 : match[1];
-    if (!variableName)
-        return [];
-    const matchedVariable = itemLevelVariables === null || itemLevelVariables === void 0 ? void 0 : itemLevelVariables.find((variable) => variable.name === variableName);
-    if (!matchedVariable)
-        return [];
-    const valueSetExpression = matchedVariable.expression;
-    if (!valueSetExpression)
-        return [];
-    if (!VALID_VALUE_SET_URL_REGEX.test(valueSetExpression))
-        return [];
-    return (_a = preprocessedCodings[valueSetExpression]) !== null && _a !== void 0 ? _a : [];
-}
-export function createValueSetToXFhirQueryVariableNameMap(variables) {
-    const valueSetToNameMap = {};
-    for (const [name, variable] of Object.entries(variables)) {
-        const expressionStr = variable.valueExpression.expression;
-        if (expressionStr && VALID_VALUE_SET_URL_REGEX.test(expressionStr)) {
-            valueSetToNameMap[expressionStr] = name;
-        }
-    }
-    return valueSetToNameMap;
-}
-export function getResourceFromLaunchContext(resourceType, patient, user, encounter) {
-    switch (resourceType) {
-        case 'Patient':
-            return patient;
-        case 'Practitioner':
-            return user;
-        case 'Encounter':
-            return encounter;
-    }
-    return null;
-}
-//# sourceMappingURL=valueSet.js.map

package/src/utils/valueSet.js.map

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