@abi-software/map-side-bar 1.3.25 → 1.3.26

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@abi-software/map-side-bar",
-  "version": "1.3.25",
+  "version": "1.3.26",
   "main": "./dist/map-side-bar.common.js",
   "files": [
     "dist/*",

package/scaffold_context_info.json

@@ -2,6 +2,7 @@
     "description": "This dataset contains single cell scale anatomical map of the rat intrinsic cardiac nervous system (ICNS) across four male and three female hearts. These cell clusters can be seen by the yellow data points on the image as well as spherical markers on the 3D heart scaffold. The dataset provides an integrative framework to visualise the spatial distribution of ICNS across different hearts.",
     "heading": "Mapped ICN samples",
     "id": "sparc.science.context_data",
+    "views": [],
     "samples": [
         {
             "annotation": "",

package/src/components/ContextCard.vue

@@ -5,7 +5,7 @@
       <div v-show="!showDetails" class="hide" @click="showDetails = !showDetails">Show information<i class="el-icon-arrow-down"></i></div>
       <el-card v-if="showDetails && Object.keys(contextData).length !== 0" v-loading="loading" class="context-card" >
         <div class="card-left">
-          <img :src="entry.banner" class="context-image">
+          <img :src="banner" class="context-image">
         </div>
         <div class="card-right scrollbar">
           <div class="title">{{contextData.heading}}</div>
@@ -158,6 +158,16 @@ export default {
       }
       else return false
     },
+    banner: function(){
+      if (this.contextData.banner){
+        this.getFileFromPath(this.contextData.banner) 
+      } else if (this.contextData && this.contextData.views) {
+        if(this.contextData.views[0].thumbnail){
+          return this.getFileFromPath(this.contextData.views[0].thumbnail)
+        }
+      } 
+      return this.entry.banner
+    }
   },
   methods: {
     samplesMatching: function(viewId){

package/src/components/ImageGallery.vue

@@ -215,6 +215,7 @@ export default {
     },
     createScaffoldItems: function () {
       if (this.entry.scaffolds) {
+        window.entry = this.entry
         let index = 0;
         this.entry.scaffolds.forEach((scaffold, i) => {
           const filePath = scaffold.dataset.path;

package/src/components/SidebarContent.vue

@@ -311,7 +311,7 @@ export default {
       }
       data.results.forEach(element => {
         // match the scicrunch result with algolia result
-        let i = this.results.findIndex(res=> res.name === element.name)
+        let i = this.results.findIndex(res => element.doi ? element.doi.includes(res.doi) : false )
         // Assign scicrunch results to the object
         Object.assign(this.results[i], element)
         // Assign the attributes that need some processing
@@ -322,7 +322,7 @@ export default {
           numberSubjects: element.subjectSize
             ? parseInt(element.subjectSize)
             : 0,
-          updated: element.updated[0].timestamp.split("T")[0],
+          updated: (element.updated && element.updated.length) > 0 ? element.updated[0].timestamp.split("T")[0] : "",
           url: element.uri[0],
           datasetId: element.dataset_identifier,
           datasetRevision: element.dataset_revision,

package/src/components/delte.json

@@ -1,27 +0,0 @@
-{
-    "description": "Mean luminal pressure (represented by a color field with red as high pressure and blue as low pressure) recorded from the proximal, transverse and distal sections of the pig colon are mapped on the scaffold. \n\nBaseline data was collected for 30min, followed by 15min of stimulation and 30min of post-stimulation.",
-    "heading": "Direct proximal colon stimulation",
-    "id": "sparc.science.context_data",
-    "samples": [
-        {
-            "annotation": "",
-            "description": "Manometry data recorded from pigs under direct proximal colon stimulation.",
-            "doi": "https://doi.org/10.26275/up27-ibcr",
-            "heading": "Proximal direct stimulation samples",
-            "id": "Sample 1",
-            "path": "derivative\\stim_proximal-colon_manometry.csv",
-            "view": "View 1"
-        }
-    ],
-    "version": "0.1.0",
-    "views": [
-        {
-            "annotation": "--",
-            "description": "Sections of pig colon scaffold with mapped manometry data where the data are collected from. ",
-            "id": "View 1",
-            "path": "colon_Layout1_view.json",
-            "sample": "Sample 1",
-            "thumbnail": "derivative\\pig_colon_main_thumbnail.jpeg"
-        }
-    ]
-}