@abi-software/map-side-bar 1.3.25 → 1.3.26

package/README.md

@@ -51,3 +51,96 @@ envVars contains environment varibables like so:
 ```
 
 actionClick event is called when an action button has benn clicked on.
+
+
+## Sidebar Data formats
+### Algolia
+
+Data retrieved from Algolia can be found here:
+https://github.com/ABI-Software/map-sidebar/blob/3310b165489b10901f50a21e5689ef046251dbd9/src/algolia/algolia.js#L136
+
+```
+           [
+            'pennsieve.publishDate',  // optional
+            'pennsieve.updatedAt', // optional
+            'Item.curie', //contains the DOI for the dataset (required)
+            'Item.name', // dataset title (required)
+            'Item.description', // dataset description (required)
+            'objectID', // Pennsieve discover ID (required)
+          ],
+```
+
+### Scicrunch
+
+Data retrieved from scicrunch can be found here:
+https://github.com/nih-sparc/sparc-api/blob/f3444a32964f5340e0ee1f10a08a05839620d098/app/scicrunch_processing_common.py#L25
+
+And mimetypes can be viewed here
+https://github.com/nih-sparc/sparc-api/blob/f3444a32964f5340e0ee1f10a08a05839620d098/app/scicrunch_processing_common.py#L28
+
+```
+ADDITIONAL_LINKS = 'additionalLinks'
+BIOLUCIDA_2D = 'biolucida-2d'
+BIOLUCIDA_3D = 'biolucida-3d'
+COMMON_IMAGES = 'common-images'
+CONTEXT_FILE = 'abi-context-file'
+CSV = 'csv'
+NAME = 'name'
+ORGANS = 'organs'
+PLOT_FILE = 'abi-plot'
+SEGMENTATION_FILES = 'mbf-segmentation'
+SCAFFOLD_DIR = 'abi-scaffold-dir'
+SCAFFOLD_FILE = 'abi-scaffold-metadata-file'
+THUMBNAIL_IMAGE = 'abi-thumbnail'
+SCAFFOLD_VIEW_FILE = 'abi-scaffold-view-file'
+SIMULATION_FILE = 'abi-simulation-file'
+VIDEO = 'video'
+VERSION = 'version'
+README = 'readme'
+TITLE = 'title'
+```
+
+Note: All are optional except for ‘name’ 
+
+### Sidebar input processing
+Sidebar input processing can be viewed here:
+https://github.com/ABI-Software/map-sidebar/blob/3310b165489b10901f50a21e5689ef046251dbd9/src/components/SidebarContent.vue#L318
+
+It is used to keep the code from attempting to access an object property that does not exist
+
+### Context card data format
+All fields are strings:
+```
+{
+  "description": required ,
+  "id": optional,
+  "samples": [ // array required here (can be empty)
+    {
+      "annotation": optional,
+      "description": required,
+      "doi": optional // Doi will be used to link sample to a separate dataset,
+      "heading": required,
+      "id": required,
+      "path": optional // path will be used to link to file location,
+      "view": optional // Will be used to link to “views[i].id”
+    }
+  ],
+  "version": // not currently used,
+  "views": [ // array required here (can be empty)
+    {
+      "annotation": optional,
+      "description": required,
+      "id": requried,
+      "path": required // relative path to the view file, eg "derivative\\Scaffolds\\scaffoldMap_tenial_view.json",
+      "sample": optional // used to link to views to samples
+      "thumbnail": optional // technically optional but it won’t look great
+    } 
+  ]
+}
+```
+
+An example context card file can be viewed here:
+https://drive.google.com/file/d/15NVRBny7WGltpMSRbsgMglXo0xOC3-Q9/view?usp=sharing
+
+
+

package/delte.json

@@ -0,0 +1,30 @@
+{
+    "description": "This dataset contains single cell scale anatomical map of the rat intrinsic cardiac nervous system (ICNS) across four male and three female hearts. These cell clusters can be seen by the yellow data points on the image as well as spherical markers on the 3D heart scaffold. The dataset provides an integrative framework to visualise the spatial distribution of ICNS across different hearts.",
+    "heading": "Mapped ICN samples",
+    "id": "sparc.science.context_data",
+    "samples": [
+        {
+            "annotation": "",
+            "description": "Spatial location of isolated ICNS mapped onto a generic heart scaffold",
+            "doi": "",
+            "heading": "ICNS from subject M54-8",
+            "id": "Sample 1",
+            "path": "",
+            "view": "View 1",
+            "color": "#FFFF00",
+            "thumbnail": "https://raw.githubusercontent.com/ABI-Software/map-sidebar/main/assets/temp-pics/orange.png"
+        },
+        {
+            "annotation": "",
+            "description": "Spatial location of isolated ICNS mapped onto a generic heart scaffold",
+            "doi": "",
+            "heading": "ICNS from subject M54-5",
+            "id": "Sample 2",
+            "path": "",
+            "view": "View 2",
+            "color": "#FFA500",
+            "thumbnail": "https://raw.githubusercontent.com/ABI-Software/map-sidebar/main/assets/temp-pics/teal.png"
+        }
+    ],
+    "version": "0.1.0"
+}

package/dist/map-side-bar.common.js

@@ -108,17 +108,6 @@ module.exports = require("element-ui/lib/theme-chalk/pagination.css");
 
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@@ -161,6 +150,17 @@ module.exports = require("core-js/modules/es.array.concat");
 
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@@ -189,13 +189,6 @@ module.exports = require("element-ui/lib/theme-chalk/button.css");
 
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@@ -210,6 +203,13 @@ module.exports = require("element-ui/lib/theme-chalk/loading.css");
 
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@@ -326,6 +326,13 @@ module.exports = require("@abi-software/gallery/dist/gallery.css");
 
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@@ -629,10 +614,14 @@ module.exports = require("element-ui/lib/icon");
 
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 var locale_ = __webpack_require__("7f9f");
 var locale_default = /*#__PURE__*/__webpack_require__.n(locale_);
 
-// CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"474bd094-vue-loader-template"}!./node_modules/vue-loader/lib/loaders/templateLoader.js??vue-loader-options!./node_modules/cache-loader/dist/cjs.js??ref--0-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/SidebarContent.vue?vue&type=template&id=512473e4&scoped=true&
-var SidebarContentvue_type_template_id_512473e4_scoped_true_render = function () {var _vm=this;var _h=_vm.$createElement;var _c=_vm._self._c||_h;return _c('el-card',{staticClass:"content-card",attrs:{"body-style":_vm.bodyStyle}},[_c('div',{staticClass:"header",attrs:{"slot":"header"},slot:"header"},[(_vm.contextCardEntry && _vm.contextCardEnabled)?_c('context-card',{attrs:{"entry":_vm.contextCardEntry,"envVars":_vm.envVars}}):_vm._e(),_c('el-input',{staticClass:"search-input",attrs:{"placeholder":"Search","clearable":""},on:{"clear":_vm.clearSearchClicked},nativeOn:{"keyup":function($event){return _vm.searchEvent($event)}},model:{value:(_vm.searchInput),callback:function ($$v) {_vm.searchInput=$$v},expression:"searchInput"}}),_c('el-button',{staticClass:"button",on:{"click":_vm.searchEvent}},[_vm._v("Search")])],1),_c('SearchFilters',{ref:"filtersRef",staticClass:"filters",attrs:{"entry":_vm.filterEntry,"envVars":_vm.envVars},on:{"filterResults":_vm.filterUpdate,"numberPerPage":_vm.numberPerPageUpdate,"loading":_vm.filtersLoading,"cascaderReady":_vm.cascaderReady}}),_c('div',{directives:[{name:"loading",rawName:"v-loading",value:(_vm.loadingCards),expression:"loadingCards"}],ref:"content",staticClass:"content scrollbar"},[(_vm.results.length === 0 && !_vm.loadingCards)?_c('div',{staticClass:"error-feedback"},[_vm._v("No results found - Please change your search / filter criteria.")]):_vm._e(),_vm._l((_vm.results),function(result){return _c('div',{key:result.doi,staticClass:"step-item"},[_c('DatasetCard',{attrs:{"entry":result,"envVars":_vm.envVars},on:{"contextUpdate":_vm.contextCardUpdate}})],1)}),_c('el-pagination',{staticClass:"pagination",attrs:{"current-page":_vm.page,"hide-on-single-page":"","large":"","layout":"prev, pager, next","page-size":_vm.numberPerPage,"total":_vm.numberOfHits},on:{"update:currentPage":function($event){_vm.page=$event},"update:current-page":function($event){_vm.page=$event},"current-change":_vm.pageChange}})],2)],1)}
-var SidebarContentvue_type_template_id_512473e4_scoped_true_staticRenderFns = []
+// CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"474bd094-vue-loader-template"}!./node_modules/vue-loader/lib/loaders/templateLoader.js??vue-loader-options!./node_modules/cache-loader/dist/cjs.js??ref--0-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/SidebarContent.vue?vue&type=template&id=13cf0a2e&scoped=true&
+var SidebarContentvue_type_template_id_13cf0a2e_scoped_true_render = function () {var _vm=this;var _h=_vm.$createElement;var _c=_vm._self._c||_h;return _c('el-card',{staticClass:"content-card",attrs:{"body-style":_vm.bodyStyle}},[_c('div',{staticClass:"header",attrs:{"slot":"header"},slot:"header"},[(_vm.contextCardEntry && _vm.contextCardEnabled)?_c('context-card',{attrs:{"entry":_vm.contextCardEntry,"envVars":_vm.envVars}}):_vm._e(),_c('el-input',{staticClass:"search-input",attrs:{"placeholder":"Search","clearable":""},on:{"clear":_vm.clearSearchClicked},nativeOn:{"keyup":function($event){return _vm.searchEvent($event)}},model:{value:(_vm.searchInput),callback:function ($$v) {_vm.searchInput=$$v},expression:"searchInput"}}),_c('el-button',{staticClass:"button",on:{"click":_vm.searchEvent}},[_vm._v("Search")])],1),_c('SearchFilters',{ref:"filtersRef",staticClass:"filters",attrs:{"entry":_vm.filterEntry,"envVars":_vm.envVars},on:{"filterResults":_vm.filterUpdate,"numberPerPage":_vm.numberPerPageUpdate,"loading":_vm.filtersLoading,"cascaderReady":_vm.cascaderReady}}),_c('div',{directives:[{name:"loading",rawName:"v-loading",value:(_vm.loadingCards),expression:"loadingCards"}],ref:"content",staticClass:"content scrollbar"},[(_vm.results.length === 0 && !_vm.loadingCards)?_c('div',{staticClass:"error-feedback"},[_vm._v("No results found - Please change your search / filter criteria.")]):_vm._e(),_vm._l((_vm.results),function(result){return _c('div',{key:result.doi,staticClass:"step-item"},[_c('DatasetCard',{attrs:{"entry":result,"envVars":_vm.envVars},on:{"contextUpdate":_vm.contextCardUpdate}})],1)}),_c('el-pagination',{staticClass:"pagination",attrs:{"current-page":_vm.page,"hide-on-single-page":"","large":"","layout":"prev, pager, next","page-size":_vm.numberPerPage,"total":_vm.numberOfHits},on:{"update:currentPage":function($event){_vm.page=$event},"update:current-page":function($event){_vm.page=$event},"current-change":_vm.pageChange}})],2)],1)}
+var SidebarContentvue_type_template_id_13cf0a2e_scoped_true_staticRenderFns = []
 
 
-// CONCATENATED MODULE: ./src/components/SidebarContent.vue?vue&type=template&id=512473e4&scoped=true&
+// CONCATENATED MODULE: ./src/components/SidebarContent.vue?vue&type=template&id=13cf0a2e&scoped=true&
 
 // EXTERNAL MODULE: external "core-js/modules/es.array.find-index"
 var es_array_find_index_ = __webpack_require__("aecd");
 
+// EXTERNAL MODULE: external "core-js/modules/es.array.includes"
+var es_array_includes_ = __webpack_require__("ab7e");
+
 // EXTERNAL MODULE: external "core-js/modules/es.array.iterator"
 var es_array_iterator_ = __webpack_require__("8c84");
 
@@ -905,6 +908,9 @@ var es_regexp_to_string_ = __webpack_require__("5fef");
 // EXTERNAL MODULE: external "core-js/modules/es.set"
 var es_set_ = __webpack_require__("47ff");
 
+// EXTERNAL MODULE: external "core-js/modules/es.string.includes"
+var es_string_includes_ = __webpack_require__("fd48");
+
 // EXTERNAL MODULE: external "core-js/modules/es.string.iterator"
 var es_string_iterator_ = __webpack_require__("907b");
 
@@ -1050,9 +1056,6 @@ var SearchFiltersvue_type_template_id_7f7ea160_scoped_true_staticRenderFns = []
 // EXTERNAL MODULE: external "core-js/modules/es.array.find"
 var es_array_find_ = __webpack_require__("fe0e");
 
-// EXTERNAL MODULE: external "core-js/modules/es.array.includes"
-var es_array_includes_ = __webpack_require__("ab7e");
-
 // EXTERNAL MODULE: external "core-js/modules/es.array.slice"
 var es_array_slice_ = __webpack_require__("6579");
 
@@ -1065,9 +1068,6 @@ var es_array_splice_ = __webpack_require__("7c81");
 // EXTERNAL MODULE: external "core-js/modules/es.promise.finally"
 var es_promise_finally_ = __webpack_require__("f96d");
 
-// EXTERNAL MODULE: external "core-js/modules/es.string.includes"
-var es_string_includes_ = __webpack_require__("fd48");
-
 // EXTERNAL MODULE: external "core-js/modules/es.string.replace"
 var es_string_replace_ = __webpack_require__("bfab");
 
@@ -2408,12 +2408,12 @@ var BadgesGroup_component = normalizeComponent(
 
 var EventBus = new external_vue_default.a();
 /* harmony default export */ var components_EventBus = (EventBus);
-// CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"474bd094-vue-loader-template"}!./node_modules/vue-loader/lib/loaders/templateLoader.js??vue-loader-options!./node_modules/cache-loader/dist/cjs.js??ref--0-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/ImageGallery.vue?vue&type=template&id=0cc002e7&scoped=true&
-var ImageGalleryvue_type_template_id_0cc002e7_scoped_true_render = function () {var _vm=this;var _h=_vm.$createElement;var _c=_vm._self._c||_h;return _c('div',{staticClass:"full-size"},[_c('gallery',{ref:"gallery",attrs:{"bottomSpacer":_vm.bottomSpacer,"cardWidth":10,"items":_vm.galleryItems,"max-width":_vm.maxWidth,"show-indicator-bar":false,"show-card-details":true,"highlight-active":false,"image-style":_vm.imageStyle,"image-container-style":_vm.imageContainerStyle,"body-style":_vm.bodyStyle,"shadow":_vm.shadow},on:{"card-clicked":_vm.cardClicked}})],1)}
-var ImageGalleryvue_type_template_id_0cc002e7_scoped_true_staticRenderFns = []
+// CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"474bd094-vue-loader-template"}!./node_modules/vue-loader/lib/loaders/templateLoader.js??vue-loader-options!./node_modules/cache-loader/dist/cjs.js??ref--0-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/ImageGallery.vue?vue&type=template&id=c336c3ca&scoped=true&
+var ImageGalleryvue_type_template_id_c336c3ca_scoped_true_render = function () {var _vm=this;var _h=_vm.$createElement;var _c=_vm._self._c||_h;return _c('div',{staticClass:"full-size"},[_c('gallery',{ref:"gallery",attrs:{"bottomSpacer":_vm.bottomSpacer,"cardWidth":10,"items":_vm.galleryItems,"max-width":_vm.maxWidth,"show-indicator-bar":false,"show-card-details":true,"highlight-active":false,"image-style":_vm.imageStyle,"image-container-style":_vm.imageContainerStyle,"body-style":_vm.bodyStyle,"shadow":_vm.shadow},on:{"card-clicked":_vm.cardClicked}})],1)}
+var ImageGalleryvue_type_template_id_c336c3ca_scoped_true_staticRenderFns = []
 
 
-// CONCATENATED MODULE: ./src/components/ImageGallery.vue?vue&type=template&id=0cc002e7&scoped=true&
+// CONCATENATED MODULE: ./src/components/ImageGallery.vue?vue&type=template&id=c336c3ca&scoped=true&
 
 // CONCATENATED MODULE: ./node_modules/@babel/runtime/helpers/esm/iterableToArrayLimit.js
 
@@ -2727,6 +2727,7 @@ var ImageGalleryvue_type_script_lang_js_capitalise = function capitalise(string)
       var _this3 = this;
 
       if (this.entry.scaffolds) {
+        window.entry = this.entry;
         var index = 0;
         this.entry.scaffolds.forEach(function (scaffold, i) {
           var filePath = scaffold.dataset.path;
@@ -2949,8 +2950,8 @@ var ImageGalleryvue_type_script_lang_js_capitalise = function capitalise(string)
 });
 // CONCATENATED MODULE: ./src/components/ImageGallery.vue?vue&type=script&lang=js&
  /* harmony default export */ var components_ImageGalleryvue_type_script_lang_js_ = (ImageGalleryvue_type_script_lang_js_); 
-// EXTERNAL MODULE: ./src/components/ImageGallery.vue?vue&type=style&index=0&id=0cc002e7&scoped=true&lang=css&
-var ImageGalleryvue_type_style_index_0_id_0cc002e7_scoped_true_lang_css_ = __webpack_require__("9cb0");
+// EXTERNAL MODULE: ./src/components/ImageGallery.vue?vue&type=style&index=0&id=c336c3ca&scoped=true&lang=css&
+var ImageGalleryvue_type_style_index_0_id_c336c3ca_scoped_true_lang_css_ = __webpack_require__("b725");
 
 // CONCATENATED MODULE: ./src/components/ImageGallery.vue
 
@@ -2963,11 +2964,11 @@ var ImageGalleryvue_type_style_index_0_id_0cc002e7_scoped_true_lang_css_ = __web
 
 var ImageGallery_component = normalizeComponent(
   components_ImageGalleryvue_type_script_lang_js_,
-  ImageGalleryvue_type_template_id_0cc002e7_scoped_true_render,
-  ImageGalleryvue_type_template_id_0cc002e7_scoped_true_staticRenderFns,
+  ImageGalleryvue_type_template_id_c336c3ca_scoped_true_render,
+  ImageGalleryvue_type_template_id_c336c3ca_scoped_true_staticRenderFns,
   false,
   null,
-  "0cc002e7",
+  "c336c3ca",
   null
   
 )
@@ -3263,12 +3264,12 @@ var DatasetCard_component = normalizeComponent(
 )
 
 /* harmony default export */ var DatasetCard = (DatasetCard_component.exports);
-// CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"474bd094-vue-loader-template"}!./node_modules/vue-loader/lib/loaders/templateLoader.js??vue-loader-options!./node_modules/cache-loader/dist/cjs.js??ref--0-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/ContextCard.vue?vue&type=template&id=2244b66e&scoped=true&
-var ContextCardvue_type_template_id_2244b66e_scoped_true_render = function () {var _vm=this;var _h=_vm.$createElement;var _c=_vm._self._c||_h;return _c('div',{ref:"container",staticClass:"context-card-container"},[_c('div',{directives:[{name:"show",rawName:"v-show",value:(_vm.showContextCard),expression:"showContextCard"}]},[_c('div',{directives:[{name:"show",rawName:"v-show",value:(_vm.showDetails),expression:"showDetails"}],staticClass:"hide",on:{"click":function($event){_vm.showDetails = !_vm.showDetails}}},[_vm._v("Hide information"),_c('i',{staticClass:"el-icon-arrow-up"})]),_c('div',{directives:[{name:"show",rawName:"v-show",value:(!_vm.showDetails),expression:"!showDetails"}],staticClass:"hide",on:{"click":function($event){_vm.showDetails = !_vm.showDetails}}},[_vm._v("Show information"),_c('i',{staticClass:"el-icon-arrow-down"})]),(_vm.showDetails && Object.keys(_vm.contextData).length !== 0)?_c('el-card',{directives:[{name:"loading",rawName:"v-loading",value:(_vm.loading),expression:"loading"}],staticClass:"context-card"},[_c('div',{staticClass:"card-left"},[_c('img',{staticClass:"context-image",attrs:{"src":_vm.entry.banner}})]),_c('div',{staticClass:"card-right scrollbar"},[_c('div',{staticClass:"title"},[_vm._v(_vm._s(_vm.contextData.heading))]),_c('div',{domProps:{"innerHTML":_vm._s(_vm.contextData.description)}}),_c('br'),(!_vm.samplesUnderViews)?[(_vm.contextData.views && _vm.contextData.views.length > 0)?_c('div',{staticClass:"subtitle"},[_vm._v("Scaffold Views")]):_vm._e(),_vm._l((_vm.contextData.views),function(view,i){return [_c('div',{key:i+'_1',staticClass:"context-card-view",on:{"click":function($event){return _vm.openViewFile(view)}}},[_c('img',{staticClass:"view-image",attrs:{"src":_vm.getFileFromPath(view.thumbnail)}}),_c('div',{staticClass:"view-description"},[_vm._v(_vm._s(view.description))])]),_c('div',{key:i,staticClass:"padding"})]}),_c('div',{staticStyle:{"margin-bottom":"16px"}}),(_vm.contextData.samples && _vm.contextData.samples.length > 0)?_c('div',{staticClass:"subtitle"},[_vm._v("Samples on Scaffold")]):_vm._e(),_vm._l((_vm.contextData.samples),function(sample,i){return [_c('span',{key:i+'_3',staticClass:"context-card-item cursor-pointer",on:{"click":function($event){return _vm.toggleSampleDetails(i)}}},[_c('div',{key:i+'_6',staticStyle:{"display":"flex"}},[(sample.color)?_c('div',{staticClass:"color-box",style:('background-color:'+ sample.color)}):(sample.thumbnail)?_c('img',{staticClass:"key-image",attrs:{"src":_vm.getFileFromPath(sample.thumbnail)}}):_vm._e(),_vm._v(" "+_vm._s(sample.heading)+" "),_c('i',{staticClass:"el-icon-warning-outline info"})])]),(_vm.sampleDetails[i])?_c('div',{key:i+'_4',domProps:{"innerHTML":_vm._s(sample.description)}}):_vm._e(),(_vm.sampleDetails[i] && sample.path)?_c('a',{key:i+'_5',attrs:{"href":_vm.generateFileLink(sample),"target":"_blank"}},[_vm._v("View Source")]):_vm._e(),_c('div',{key:i+'_2',staticClass:"padding"})]})]:[(_vm.contextData.views && _vm.contextData.views.length > 0)?_c('div',{staticClass:"subtitle"},[_vm._v("Scaffold Views")]):_vm._e(),_vm._l((_vm.contextData.views),function(view,i){return [_c('span',{key:i+'_1',staticClass:"context-card-view",on:{"click":function($event){return _vm.viewClicked(view, i)}}},[_c('img',{staticClass:"view-image",attrs:{"src":_vm.getFileFromPath(view.thumbnail)}}),_c('div',{staticClass:"view-description"},[_vm._v(_vm._s(view.description)),_c('i',{staticClass:"el-icon-warning-outline info"})])]),(_vm.sampleDetails[i])?_c('div',{key:i+'_2',domProps:{"innerHTML":_vm._s(_vm.samplesMatching(view.id).description)}}):_vm._e(),(_vm.sampleDetails[i] && _vm.samplesMatching(view.id).path)?_c('a',{key:i+'_5',attrs:{"href":_vm.generateFileLink(_vm.samplesMatching(view.id)),"target":"_blank"}},[_vm._v("View Source")]):_vm._e(),_c('div',{key:i,staticClass:"padding"}),(_vm.sampleDetails[i])?_c('div',{key:i+'_6',staticClass:"padding"}):_vm._e()]})]],2)]):_vm._e()],1)])}
-var ContextCardvue_type_template_id_2244b66e_scoped_true_staticRenderFns = []
+// CONCATENATED MODULE: ./node_modules/cache-loader/dist/cjs.js?{"cacheDirectory":"node_modules/.cache/vue-loader","cacheIdentifier":"474bd094-vue-loader-template"}!./node_modules/vue-loader/lib/loaders/templateLoader.js??vue-loader-options!./node_modules/cache-loader/dist/cjs.js??ref--0-0!./node_modules/vue-loader/lib??vue-loader-options!./src/components/ContextCard.vue?vue&type=template&id=c919a090&scoped=true&
+var ContextCardvue_type_template_id_c919a090_scoped_true_render = function () {var _vm=this;var _h=_vm.$createElement;var _c=_vm._self._c||_h;return _c('div',{ref:"container",staticClass:"context-card-container"},[_c('div',{directives:[{name:"show",rawName:"v-show",value:(_vm.showContextCard),expression:"showContextCard"}]},[_c('div',{directives:[{name:"show",rawName:"v-show",value:(_vm.showDetails),expression:"showDetails"}],staticClass:"hide",on:{"click":function($event){_vm.showDetails = !_vm.showDetails}}},[_vm._v("Hide information"),_c('i',{staticClass:"el-icon-arrow-up"})]),_c('div',{directives:[{name:"show",rawName:"v-show",value:(!_vm.showDetails),expression:"!showDetails"}],staticClass:"hide",on:{"click":function($event){_vm.showDetails = !_vm.showDetails}}},[_vm._v("Show information"),_c('i',{staticClass:"el-icon-arrow-down"})]),(_vm.showDetails && Object.keys(_vm.contextData).length !== 0)?_c('el-card',{directives:[{name:"loading",rawName:"v-loading",value:(_vm.loading),expression:"loading"}],staticClass:"context-card"},[_c('div',{staticClass:"card-left"},[_c('img',{staticClass:"context-image",attrs:{"src":_vm.banner}})]),_c('div',{staticClass:"card-right scrollbar"},[_c('div',{staticClass:"title"},[_vm._v(_vm._s(_vm.contextData.heading))]),_c('div',{domProps:{"innerHTML":_vm._s(_vm.contextData.description)}}),_c('br'),(!_vm.samplesUnderViews)?[(_vm.contextData.views && _vm.contextData.views.length > 0)?_c('div',{staticClass:"subtitle"},[_vm._v("Scaffold Views")]):_vm._e(),_vm._l((_vm.contextData.views),function(view,i){return [_c('div',{key:i+'_1',staticClass:"context-card-view",on:{"click":function($event){return _vm.openViewFile(view)}}},[_c('img',{staticClass:"view-image",attrs:{"src":_vm.getFileFromPath(view.thumbnail)}}),_c('div',{staticClass:"view-description"},[_vm._v(_vm._s(view.description))])]),_c('div',{key:i,staticClass:"padding"})]}),_c('div',{staticStyle:{"margin-bottom":"16px"}}),(_vm.contextData.samples && _vm.contextData.samples.length > 0)?_c('div',{staticClass:"subtitle"},[_vm._v("Samples on Scaffold")]):_vm._e(),_vm._l((_vm.contextData.samples),function(sample,i){return [_c('span',{key:i+'_3',staticClass:"context-card-item cursor-pointer",on:{"click":function($event){return _vm.toggleSampleDetails(i)}}},[_c('div',{key:i+'_6',staticStyle:{"display":"flex"}},[(sample.color)?_c('div',{staticClass:"color-box",style:('background-color:'+ sample.color)}):(sample.thumbnail)?_c('img',{staticClass:"key-image",attrs:{"src":_vm.getFileFromPath(sample.thumbnail)}}):_vm._e(),_vm._v(" "+_vm._s(sample.heading)+" "),_c('i',{staticClass:"el-icon-warning-outline info"})])]),(_vm.sampleDetails[i])?_c('div',{key:i+'_4',domProps:{"innerHTML":_vm._s(sample.description)}}):_vm._e(),(_vm.sampleDetails[i] && sample.path)?_c('a',{key:i+'_5',attrs:{"href":_vm.generateFileLink(sample),"target":"_blank"}},[_vm._v("View Source")]):_vm._e(),_c('div',{key:i+'_2',staticClass:"padding"})]})]:[(_vm.contextData.views && _vm.contextData.views.length > 0)?_c('div',{staticClass:"subtitle"},[_vm._v("Scaffold Views")]):_vm._e(),_vm._l((_vm.contextData.views),function(view,i){return [_c('span',{key:i+'_1',staticClass:"context-card-view",on:{"click":function($event){return _vm.viewClicked(view, i)}}},[_c('img',{staticClass:"view-image",attrs:{"src":_vm.getFileFromPath(view.thumbnail)}}),_c('div',{staticClass:"view-description"},[_vm._v(_vm._s(view.description)),_c('i',{staticClass:"el-icon-warning-outline info"})])]),(_vm.sampleDetails[i])?_c('div',{key:i+'_2',domProps:{"innerHTML":_vm._s(_vm.samplesMatching(view.id).description)}}):_vm._e(),(_vm.sampleDetails[i] && _vm.samplesMatching(view.id).path)?_c('a',{key:i+'_5',attrs:{"href":_vm.generateFileLink(_vm.samplesMatching(view.id)),"target":"_blank"}},[_vm._v("View Source")]):_vm._e(),_c('div',{key:i,staticClass:"padding"}),(_vm.sampleDetails[i])?_c('div',{key:i+'_6',staticClass:"padding"}):_vm._e()]})]],2)]):_vm._e()],1)])}
+var ContextCardvue_type_template_id_c919a090_scoped_true_staticRenderFns = []
 
 
-// CONCATENATED MODULE: ./src/components/ContextCard.vue?vue&type=template&id=2244b66e&scoped=true&
+// CONCATENATED MODULE: ./src/components/ContextCard.vue?vue&type=template&id=c919a090&scoped=true&
 
 // EXTERNAL MODULE: external "element-ui/lib/theme-chalk/link.css"
 var link_css_ = __webpack_require__("230a");
@@ -3545,6 +3546,17 @@ var convertBackslashToForwardSlash = function convertBackslashToForwardSlash(pat
           return false;
         }
       } else return false;
+    },
+    banner: function banner() {
+      if (this.contextData.banner) {
+        this.getFileFromPath(this.contextData.banner);
+      } else if (this.contextData && this.contextData.views) {
+        if (this.contextData.views[0].thumbnail) {
+          return this.getFileFromPath(this.contextData.views[0].thumbnail);
+        }
+      }
+
+      return this.entry.banner;
     }
   },
   methods: {
@@ -3646,8 +3658,8 @@ var convertBackslashToForwardSlash = function convertBackslashToForwardSlash(pat
 });
 // CONCATENATED MODULE: ./src/components/ContextCard.vue?vue&type=script&lang=js&
  /* harmony default export */ var components_ContextCardvue_type_script_lang_js_ = (ContextCardvue_type_script_lang_js_); 
-// EXTERNAL MODULE: ./src/components/ContextCard.vue?vue&type=style&index=0&id=2244b66e&scoped=true&lang=css&
-var ContextCardvue_type_style_index_0_id_2244b66e_scoped_true_lang_css_ = __webpack_require__("0923");
+// EXTERNAL MODULE: ./src/components/ContextCard.vue?vue&type=style&index=0&id=c919a090&scoped=true&lang=css&
+var ContextCardvue_type_style_index_0_id_c919a090_scoped_true_lang_css_ = __webpack_require__("1c9c");
 
 // CONCATENATED MODULE: ./src/components/ContextCard.vue
 
@@ -3660,11 +3672,11 @@ var ContextCardvue_type_style_index_0_id_2244b66e_scoped_true_lang_css_ = __webp
 
 var ContextCard_component = normalizeComponent(
   components_ContextCardvue_type_script_lang_js_,
-  ContextCardvue_type_template_id_2244b66e_scoped_true_render,
-  ContextCardvue_type_template_id_2244b66e_scoped_true_staticRenderFns,
+  ContextCardvue_type_template_id_c919a090_scoped_true_render,
+  ContextCardvue_type_template_id_c919a090_scoped_true_staticRenderFns,
   false,
   null,
-  "2244b66e",
+  "c919a090",
   null
   
 )
@@ -3717,6 +3729,8 @@ var ContextCard_component = normalizeComponent(
 
 
 
+
+
 
 
 
@@ -4088,7 +4102,7 @@ var initial_state = {
       data.results.forEach(function (element) {
         // match the scicrunch result with algolia result
         var i = _this3.results.findIndex(function (res) {
-          return res.name === element.name;
+          return element.doi ? element.doi.includes(res.doi) : false;
         }); // Assign scicrunch results to the object
 
 
@@ -4097,7 +4111,7 @@ var initial_state = {
         Object.assign(_this3.results[i], {
           numberSamples: element.sampleSize ? parseInt(element.sampleSize) : 0,
           numberSubjects: element.subjectSize ? parseInt(element.subjectSize) : 0,
-          updated: element.updated[0].timestamp.split("T")[0],
+          updated: (element.updated && element.updated.length) > 0 ? element.updated[0].timestamp.split("T")[0] : "",
           url: element.uri[0],
           datasetId: element.dataset_identifier,
           datasetRevision: element.dataset_revision,
@@ -4177,8 +4191,8 @@ var initial_state = {
 });
 // CONCATENATED MODULE: ./src/components/SidebarContent.vue?vue&type=script&lang=js&
  /* harmony default export */ var components_SidebarContentvue_type_script_lang_js_ = (SidebarContentvue_type_script_lang_js_); 
-// EXTERNAL MODULE: ./src/components/SidebarContent.vue?vue&type=style&index=0&id=512473e4&scoped=true&lang=css&
-var SidebarContentvue_type_style_index_0_id_512473e4_scoped_true_lang_css_ = __webpack_require__("763c");
+// EXTERNAL MODULE: ./src/components/SidebarContent.vue?vue&type=style&index=0&id=13cf0a2e&scoped=true&lang=css&
+var SidebarContentvue_type_style_index_0_id_13cf0a2e_scoped_true_lang_css_ = __webpack_require__("bd6b");
 
 // CONCATENATED MODULE: ./src/components/SidebarContent.vue
 
@@ -4191,11 +4205,11 @@ var SidebarContentvue_type_style_index_0_id_512473e4_scoped_true_lang_css_ = __w
 
 var SidebarContent_component = normalizeComponent(
   components_SidebarContentvue_type_script_lang_js_,
-  SidebarContentvue_type_template_id_512473e4_scoped_true_render,
-  SidebarContentvue_type_template_id_512473e4_scoped_true_staticRenderFns,
+  SidebarContentvue_type_template_id_13cf0a2e_scoped_true_render,
+  SidebarContentvue_type_template_id_13cf0a2e_scoped_true_staticRenderFns,
   false,
   null,
-  "512473e4",
+  "13cf0a2e",
   null
   
 )