t2-web 0.1.1 → 0.1.2

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (115) hide show
  1. data/CHANGES +3 -1
  2. data/README +3 -3
  3. data/Rakefile +1 -1
  4. data/bin/t2_webapp.rb +5 -5
  5. data/public/{css → t2web/css}/form.css +0 -0
  6. data/public/t2web/css/results.css +29 -0
  7. data/public/{css → t2web/css}/results_header.css +0 -0
  8. data/public/{css → t2web/css}/results_navigation.css +0 -0
  9. data/public/{css → t2web/css}/tipsy.css +0 -0
  10. data/public/{images → t2web/images}/bullet_go.png +0 -0
  11. data/public/{images → t2web/images}/lumc_logo2.png +0 -0
  12. data/public/{images → t2web/images}/nbic_logo.gif +0 -0
  13. data/public/{images → t2web/images}/snake_transparent.gif +0 -0
  14. data/public/{images → t2web/images}/tipsy.gif +0 -0
  15. data/public/{scripts → t2web/scripts}/form.js +0 -0
  16. data/public/{scripts → t2web/scripts}/jquery-1.6.1.js +0 -0
  17. data/public/{scripts → t2web/scripts}/jquery.tipsy.js +0 -0
  18. data/public/{scripts → t2web/scripts}/results.js +0 -0
  19. data/views/form.haml +9 -9
  20. data/views/results.haml +3 -3
  21. metadata +19 -112
  22. data/doc/classes/WebT2App.html +0 -1123
  23. data/doc/classes/WebT2App.src/M000001.html +0 -18
  24. data/doc/classes/WebT2App.src/M000002.html +0 -25
  25. data/doc/classes/WebT2App.src/M000003.html +0 -22
  26. data/doc/classes/WebT2App.src/M000004.html +0 -18
  27. data/doc/classes/WebT2App.src/M000005.html +0 -18
  28. data/doc/classes/WebT2App.src/M000006.html +0 -18
  29. data/doc/classes/WebT2App.src/M000007.html +0 -18
  30. data/doc/classes/WebT2App.src/M000008.html +0 -32
  31. data/doc/classes/WebT2App.src/M000009.html +0 -27
  32. data/doc/classes/WebT2App.src/M000010.html +0 -18
  33. data/doc/classes/WebT2App.src/M000011.html +0 -21
  34. data/doc/classes/WebT2App.src/M000012.html +0 -25
  35. data/doc/classes/WebT2App.src/M000013.html +0 -22
  36. data/doc/classes/WebT2App.src/M000014.html +0 -23
  37. data/doc/classes/WebT2App.src/M000015.html +0 -32
  38. data/doc/classes/WebT2App.src/M000016.html +0 -27
  39. data/doc/classes/WebT2App.src/M000017.html +0 -18
  40. data/doc/classes/WebT2App.src/M000018.html +0 -25
  41. data/doc/classes/WebT2App.src/M000019.html +0 -22
  42. data/doc/classes/WebT2App.src/M000020.html +0 -18
  43. data/doc/classes/WebT2App.src/M000021.html +0 -18
  44. data/doc/classes/WebT2App.src/M000022.html +0 -18
  45. data/doc/classes/WebT2App.src/M000023.html +0 -18
  46. data/doc/classes/WebT2App.src/M000024.html +0 -32
  47. data/doc/classes/WebT2App.src/M000025.html +0 -27
  48. data/doc/classes/WebT2App.src/M000026.html +0 -18
  49. data/doc/classes/WebT2App.src/M000027.html +0 -21
  50. data/doc/classes/WebT2App.src/M000028.html +0 -25
  51. data/doc/classes/WebT2App.src/M000029.html +0 -22
  52. data/doc/classes/WebT2App.src/M000030.html +0 -23
  53. data/doc/classes/WebT2App.src/M000031.html +0 -32
  54. data/doc/classes/WebT2App.src/M000032.html +0 -27
  55. data/doc/classes/WebT2App.src/M000033.html +0 -18
  56. data/doc/classes/WebT2App.src/M000034.html +0 -25
  57. data/doc/classes/WebT2App.src/M000035.html +0 -22
  58. data/doc/classes/WebT2App.src/M000036.html +0 -18
  59. data/doc/classes/WebT2App.src/M000037.html +0 -18
  60. data/doc/classes/WebT2App.src/M000038.html +0 -18
  61. data/doc/classes/WebT2App.src/M000039.html +0 -18
  62. data/doc/classes/WebT2App.src/M000040.html +0 -32
  63. data/doc/classes/WebT2App.src/M000041.html +0 -27
  64. data/doc/classes/WebT2App.src/M000042.html +0 -18
  65. data/doc/classes/WebT2App.src/M000043.html +0 -25
  66. data/doc/classes/WebT2App.src/M000044.html +0 -22
  67. data/doc/classes/WebT2App.src/M000045.html +0 -18
  68. data/doc/classes/WebT2App.src/M000046.html +0 -18
  69. data/doc/classes/WebT2App.src/M000047.html +0 -18
  70. data/doc/classes/WebT2App.src/M000048.html +0 -18
  71. data/doc/classes/WebT2App.src/M000049.html +0 -32
  72. data/doc/classes/WebT2App.src/M000050.html +0 -27
  73. data/doc/created.rid +0 -1
  74. data/doc/files/bin/t2_webapp_rb.html +0 -115
  75. data/doc/files/pkg/t2-web-0_0_2/bin/web_t2_service_rb.html +0 -114
  76. data/doc/files/pkg/t2-web-0_0_3/bin/t2_webapp_rb.html +0 -115
  77. data/doc/files/pkg/t2-web-0_0_3/bin/web_t2_service_rb.html +0 -114
  78. data/doc/files/pkg/t2-web-0_0_4/bin/t2_webapp_rb.html +0 -115
  79. data/doc/files/pkg/t2-web-0_0_5/bin/t2_webapp_rb.html +0 -115
  80. data/doc/fr_class_index.html +0 -27
  81. data/doc/fr_file_index.html +0 -32
  82. data/doc/fr_method_index.html +0 -76
  83. data/doc/index.html +0 -24
  84. data/doc/rdoc/CHANGES.html +0 -170
  85. data/doc/rdoc/LICENSE.html +0 -111
  86. data/doc/rdoc/README.html +0 -142
  87. data/doc/rdoc/created.rid +0 -4
  88. data/doc/rdoc/images/brick.png +0 -0
  89. data/doc/rdoc/images/brick_link.png +0 -0
  90. data/doc/rdoc/images/bug.png +0 -0
  91. data/doc/rdoc/images/bullet_black.png +0 -0
  92. data/doc/rdoc/images/bullet_toggle_minus.png +0 -0
  93. data/doc/rdoc/images/bullet_toggle_plus.png +0 -0
  94. data/doc/rdoc/images/date.png +0 -0
  95. data/doc/rdoc/images/find.png +0 -0
  96. data/doc/rdoc/images/loadingAnimation.gif +0 -0
  97. data/doc/rdoc/images/macFFBgHack.png +0 -0
  98. data/doc/rdoc/images/package.png +0 -0
  99. data/doc/rdoc/images/page_green.png +0 -0
  100. data/doc/rdoc/images/page_white_text.png +0 -0
  101. data/doc/rdoc/images/page_white_width.png +0 -0
  102. data/doc/rdoc/images/plugin.png +0 -0
  103. data/doc/rdoc/images/ruby.png +0 -0
  104. data/doc/rdoc/images/tag_green.png +0 -0
  105. data/doc/rdoc/images/wrench.png +0 -0
  106. data/doc/rdoc/images/wrench_orange.png +0 -0
  107. data/doc/rdoc/images/zoom.png +0 -0
  108. data/doc/rdoc/index.html +0 -115
  109. data/doc/rdoc/js/darkfish.js +0 -116
  110. data/doc/rdoc/js/jquery.js +0 -32
  111. data/doc/rdoc/js/quicksearch.js +0 -114
  112. data/doc/rdoc/js/thickbox-compressed.js +0 -10
  113. data/doc/rdoc/rdoc.css +0 -763
  114. data/doc/rdoc-style.css +0 -208
  115. data/public/images/info.png +0 -0
@@ -1,115 +0,0 @@
1
- <?xml version="1.0" encoding="iso-8859-1"?>
2
- <!DOCTYPE html
3
- PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
4
- "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
5
-
6
- <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
7
- <head>
8
- <title>File: t2_webapp.rb</title>
9
- <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
10
- <meta http-equiv="Content-Script-Type" content="text/javascript" />
11
- <link rel="stylesheet" href="../../../.././rdoc-style.css" type="text/css" media="screen" />
12
- <script type="text/javascript">
13
- // <![CDATA[
14
-
15
- function popupCode( url ) {
16
- window.open(url, "Code", "resizable=yes,scrollbars=yes,toolbar=no,status=no,height=150,width=400")
17
- }
18
-
19
- function toggleCode( id ) {
20
- if ( document.getElementById )
21
- elem = document.getElementById( id );
22
- else if ( document.all )
23
- elem = eval( "document.all." + id );
24
- else
25
- return false;
26
-
27
- elemStyle = elem.style;
28
-
29
- if ( elemStyle.display != "block" ) {
30
- elemStyle.display = "block"
31
- } else {
32
- elemStyle.display = "none"
33
- }
34
-
35
- return true;
36
- }
37
-
38
- // Make codeblocks hidden by default
39
- document.writeln( "<style type=\"text/css\">div.method-source-code { display: none }</style>" )
40
-
41
- // ]]>
42
- </script>
43
-
44
- </head>
45
- <body>
46
-
47
-
48
-
49
- <div id="fileHeader">
50
- <h1>t2_webapp.rb</h1>
51
- <table class="header-table">
52
- <tr class="top-aligned-row">
53
- <td><strong>Path:</strong></td>
54
- <td>pkg/t2-web-0.0.4/bin/t2_webapp.rb
55
- </td>
56
- </tr>
57
- <tr class="top-aligned-row">
58
- <td><strong>Last Update:</strong></td>
59
- <td>Mon Feb 13 15:18:41 +0100 2012</td>
60
- </tr>
61
- </table>
62
- </div>
63
- <!-- banner header -->
64
-
65
- <div id="bodyContent">
66
-
67
-
68
-
69
- <div id="contextContent">
70
-
71
-
72
- <div id="requires-list">
73
- <h3 class="section-bar">Required files</h3>
74
-
75
- <div class="name-list">
76
- rubygems&nbsp;&nbsp;
77
- sinatra&nbsp;&nbsp;
78
- haml&nbsp;&nbsp;
79
- open-uri&nbsp;&nbsp;
80
- rest-client&nbsp;&nbsp;
81
- t2-server&nbsp;&nbsp;
82
- myexperiment-rest&nbsp;&nbsp;
83
- cgi&nbsp;&nbsp;
84
- </div>
85
- </div>
86
-
87
- </div>
88
-
89
-
90
- </div>
91
-
92
-
93
- <!-- if includes -->
94
-
95
- <div id="section">
96
-
97
-
98
-
99
-
100
-
101
-
102
-
103
-
104
- <!-- if method_list -->
105
-
106
-
107
- </div>
108
-
109
-
110
- <div id="validator-badges">
111
- <p><small><a href="http://validator.w3.org/check/referer">[Validate]</a></small></p>
112
- </div>
113
-
114
- </body>
115
- </html>
@@ -1,115 +0,0 @@
1
- <?xml version="1.0" encoding="iso-8859-1"?>
2
- <!DOCTYPE html
3
- PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
4
- "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
5
-
6
- <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
7
- <head>
8
- <title>File: t2_webapp.rb</title>
9
- <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
10
- <meta http-equiv="Content-Script-Type" content="text/javascript" />
11
- <link rel="stylesheet" href="../../../.././rdoc-style.css" type="text/css" media="screen" />
12
- <script type="text/javascript">
13
- // <![CDATA[
14
-
15
- function popupCode( url ) {
16
- window.open(url, "Code", "resizable=yes,scrollbars=yes,toolbar=no,status=no,height=150,width=400")
17
- }
18
-
19
- function toggleCode( id ) {
20
- if ( document.getElementById )
21
- elem = document.getElementById( id );
22
- else if ( document.all )
23
- elem = eval( "document.all." + id );
24
- else
25
- return false;
26
-
27
- elemStyle = elem.style;
28
-
29
- if ( elemStyle.display != "block" ) {
30
- elemStyle.display = "block"
31
- } else {
32
- elemStyle.display = "none"
33
- }
34
-
35
- return true;
36
- }
37
-
38
- // Make codeblocks hidden by default
39
- document.writeln( "<style type=\"text/css\">div.method-source-code { display: none }</style>" )
40
-
41
- // ]]>
42
- </script>
43
-
44
- </head>
45
- <body>
46
-
47
-
48
-
49
- <div id="fileHeader">
50
- <h1>t2_webapp.rb</h1>
51
- <table class="header-table">
52
- <tr class="top-aligned-row">
53
- <td><strong>Path:</strong></td>
54
- <td>pkg/t2-web-0.0.5/bin/t2_webapp.rb
55
- </td>
56
- </tr>
57
- <tr class="top-aligned-row">
58
- <td><strong>Last Update:</strong></td>
59
- <td>Mon Feb 13 15:18:41 +0100 2012</td>
60
- </tr>
61
- </table>
62
- </div>
63
- <!-- banner header -->
64
-
65
- <div id="bodyContent">
66
-
67
-
68
-
69
- <div id="contextContent">
70
-
71
-
72
- <div id="requires-list">
73
- <h3 class="section-bar">Required files</h3>
74
-
75
- <div class="name-list">
76
- rubygems&nbsp;&nbsp;
77
- sinatra&nbsp;&nbsp;
78
- haml&nbsp;&nbsp;
79
- open-uri&nbsp;&nbsp;
80
- rest-client&nbsp;&nbsp;
81
- t2-server&nbsp;&nbsp;
82
- myexperiment-rest&nbsp;&nbsp;
83
- cgi&nbsp;&nbsp;
84
- </div>
85
- </div>
86
-
87
- </div>
88
-
89
-
90
- </div>
91
-
92
-
93
- <!-- if includes -->
94
-
95
- <div id="section">
96
-
97
-
98
-
99
-
100
-
101
-
102
-
103
-
104
- <!-- if method_list -->
105
-
106
-
107
- </div>
108
-
109
-
110
- <div id="validator-badges">
111
- <p><small><a href="http://validator.w3.org/check/referer">[Validate]</a></small></p>
112
- </div>
113
-
114
- </body>
115
- </html>
@@ -1,27 +0,0 @@
1
-
2
- <?xml version="1.0" encoding="iso-8859-1"?>
3
- <!DOCTYPE html
4
- PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
5
- "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
6
-
7
- <!--
8
-
9
- Classes
10
-
11
- -->
12
- <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
13
- <head>
14
- <title>Classes</title>
15
- <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
16
- <link rel="stylesheet" href="rdoc-style.css" type="text/css" />
17
- <base target="docwin" />
18
- </head>
19
- <body>
20
- <div id="index">
21
- <h1 class="section-bar">Classes</h1>
22
- <div id="index-entries">
23
- <a href="classes/WebT2App.html">WebT2App</a><br />
24
- </div>
25
- </div>
26
- </body>
27
- </html>
@@ -1,32 +0,0 @@
1
-
2
- <?xml version="1.0" encoding="iso-8859-1"?>
3
- <!DOCTYPE html
4
- PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
5
- "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
6
-
7
- <!--
8
-
9
- Files
10
-
11
- -->
12
- <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
13
- <head>
14
- <title>Files</title>
15
- <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
16
- <link rel="stylesheet" href="rdoc-style.css" type="text/css" />
17
- <base target="docwin" />
18
- </head>
19
- <body>
20
- <div id="index">
21
- <h1 class="section-bar">Files</h1>
22
- <div id="index-entries">
23
- <a href="files/bin/t2_webapp_rb.html">bin/t2_webapp.rb</a><br />
24
- <a href="files/pkg/t2-web-0_0_2/bin/web_t2_service_rb.html">pkg/t2-web-0.0.2/bin/web_t2_service.rb</a><br />
25
- <a href="files/pkg/t2-web-0_0_3/bin/t2_webapp_rb.html">pkg/t2-web-0.0.3/bin/t2_webapp.rb</a><br />
26
- <a href="files/pkg/t2-web-0_0_3/bin/web_t2_service_rb.html">pkg/t2-web-0.0.3/bin/web_t2_service.rb</a><br />
27
- <a href="files/pkg/t2-web-0_0_4/bin/t2_webapp_rb.html">pkg/t2-web-0.0.4/bin/t2_webapp.rb</a><br />
28
- <a href="files/pkg/t2-web-0_0_5/bin/t2_webapp_rb.html">pkg/t2-web-0.0.5/bin/t2_webapp.rb</a><br />
29
- </div>
30
- </div>
31
- </body>
32
- </html>
@@ -1,76 +0,0 @@
1
-
2
- <?xml version="1.0" encoding="iso-8859-1"?>
3
- <!DOCTYPE html
4
- PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
5
- "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
6
-
7
- <!--
8
-
9
- Methods
10
-
11
- -->
12
- <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
13
- <head>
14
- <title>Methods</title>
15
- <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
16
- <link rel="stylesheet" href="rdoc-style.css" type="text/css" />
17
- <base target="docwin" />
18
- </head>
19
- <body>
20
- <div id="index">
21
- <h1 class="section-bar">Methods</h1>
22
- <div id="index-entries">
23
- <a href="classes/WebT2App.html#M000018">chomp_last_newline (WebT2App)</a><br />
24
- <a href="classes/WebT2App.html#M000002">chomp_last_newline (WebT2App)</a><br />
25
- <a href="classes/WebT2App.html#M000043">chomp_last_newline (WebT2App)</a><br />
26
- <a href="classes/WebT2App.html#M000028">chomp_last_newline (WebT2App)</a><br />
27
- <a href="classes/WebT2App.html#M000012">chomp_last_newline (WebT2App)</a><br />
28
- <a href="classes/WebT2App.html#M000034">chomp_last_newline (WebT2App)</a><br />
29
- <a href="classes/WebT2App.html#M000031">generate_data_navigation_frame (WebT2App)</a><br />
30
- <a href="classes/WebT2App.html#M000008">generate_data_navigation_frame (WebT2App)</a><br />
31
- <a href="classes/WebT2App.html#M000040">generate_data_navigation_frame (WebT2App)</a><br />
32
- <a href="classes/WebT2App.html#M000049">generate_data_navigation_frame (WebT2App)</a><br />
33
- <a href="classes/WebT2App.html#M000015">generate_data_navigation_frame (WebT2App)</a><br />
34
- <a href="classes/WebT2App.html#M000024">generate_data_navigation_frame (WebT2App)</a><br />
35
- <a href="classes/WebT2App.html#M000020">generate_header_frame (WebT2App)</a><br />
36
- <a href="classes/WebT2App.html#M000014">generate_header_frame (WebT2App)</a><br />
37
- <a href="classes/WebT2App.html#M000036">generate_header_frame (WebT2App)</a><br />
38
- <a href="classes/WebT2App.html#M000004">generate_header_frame (WebT2App)</a><br />
39
- <a href="classes/WebT2App.html#M000030">generate_header_frame (WebT2App)</a><br />
40
- <a href="classes/WebT2App.html#M000045">generate_header_frame (WebT2App)</a><br />
41
- <a href="classes/WebT2App.html#M000046">generate_header_table (WebT2App)</a><br />
42
- <a href="classes/WebT2App.html#M000005">generate_header_table (WebT2App)</a><br />
43
- <a href="classes/WebT2App.html#M000021">generate_header_table (WebT2App)</a><br />
44
- <a href="classes/WebT2App.html#M000037">generate_header_table (WebT2App)</a><br />
45
- <a href="classes/WebT2App.html#M000050">generate_html_result (WebT2App)</a><br />
46
- <a href="classes/WebT2App.html#M000032">generate_html_result (WebT2App)</a><br />
47
- <a href="classes/WebT2App.html#M000025">generate_html_result (WebT2App)</a><br />
48
- <a href="classes/WebT2App.html#M000009">generate_html_result (WebT2App)</a><br />
49
- <a href="classes/WebT2App.html#M000041">generate_html_result (WebT2App)</a><br />
50
- <a href="classes/WebT2App.html#M000016">generate_html_result (WebT2App)</a><br />
51
- <a href="classes/WebT2App.html#M000038">generate_label_tooltip (WebT2App)</a><br />
52
- <a href="classes/WebT2App.html#M000022">generate_label_tooltip (WebT2App)</a><br />
53
- <a href="classes/WebT2App.html#M000047">generate_label_tooltip (WebT2App)</a><br />
54
- <a href="classes/WebT2App.html#M000006">generate_label_tooltip (WebT2App)</a><br />
55
- <a href="classes/WebT2App.html#M000007">generate_textarea_tooltip (WebT2App)</a><br />
56
- <a href="classes/WebT2App.html#M000048">generate_textarea_tooltip (WebT2App)</a><br />
57
- <a href="classes/WebT2App.html#M000039">generate_textarea_tooltip (WebT2App)</a><br />
58
- <a href="classes/WebT2App.html#M000023">generate_textarea_tooltip (WebT2App)</a><br />
59
- <a href="classes/WebT2App.html#M000035">get_url_from_wid (WebT2App)</a><br />
60
- <a href="classes/WebT2App.html#M000029">get_url_from_wid (WebT2App)</a><br />
61
- <a href="classes/WebT2App.html#M000044">get_url_from_wid (WebT2App)</a><br />
62
- <a href="classes/WebT2App.html#M000019">get_url_from_wid (WebT2App)</a><br />
63
- <a href="classes/WebT2App.html#M000003">get_url_from_wid (WebT2App)</a><br />
64
- <a href="classes/WebT2App.html#M000013">get_url_from_wid (WebT2App)</a><br />
65
- <a href="classes/WebT2App.html#M000011">html_sanitise (WebT2App)</a><br />
66
- <a href="classes/WebT2App.html#M000027">html_sanitise (WebT2App)</a><br />
67
- <a href="classes/WebT2App.html#M000026">t2_library_sanitize (WebT2App)</a><br />
68
- <a href="classes/WebT2App.html#M000033">t2_library_sanitize (WebT2App)</a><br />
69
- <a href="classes/WebT2App.html#M000042">t2_library_sanitize (WebT2App)</a><br />
70
- <a href="classes/WebT2App.html#M000017">t2_library_sanitize (WebT2App)</a><br />
71
- <a href="classes/WebT2App.html#M000010">t2_library_sanitize (WebT2App)</a><br />
72
- <a href="classes/WebT2App.html#M000001">t2_library_sanitize (WebT2App)</a><br />
73
- </div>
74
- </div>
75
- </body>
76
- </html>
data/doc/index.html DELETED
@@ -1,24 +0,0 @@
1
- <?xml version="1.0" encoding="iso-8859-1"?>
2
- <!DOCTYPE html
3
- PUBLIC "-//W3C//DTD XHTML 1.0 Frameset//EN"
4
- "http://www.w3.org/TR/xhtml1/DTD/xhtml1-frameset.dtd">
5
-
6
- <!--
7
-
8
- RDoc Documentation
9
-
10
- -->
11
- <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
12
- <head>
13
- <title>RDoc Documentation</title>
14
- <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
15
- </head>
16
- <frameset rows="20%, 80%">
17
- <frameset cols="25%,35%,45%">
18
- <frame src="fr_file_index.html" title="Files" name="Files" />
19
- <frame src="fr_class_index.html" name="Classes" />
20
- <frame src="fr_method_index.html" name="Methods" />
21
- </frameset>
22
- <frame src="files/bin/t2_webapp_rb.html" name="docwin" />
23
- </frameset>
24
- </html>
@@ -1,170 +0,0 @@
1
- <?xml version="1.0" encoding="utf-8"?>
2
- <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN"
3
- "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd">
4
-
5
- <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
6
- <head>
7
- <meta content="text/html; charset=UTF-8" http-equiv="Content-Type" />
8
-
9
- <title>File: CHANGES [web-t2 Docs]</title>
10
-
11
- <link type="text/css" media="screen" href="./rdoc.css" rel="stylesheet" />
12
-
13
- <script src="./js/jquery.js" type="text/javascript"
14
- charset="utf-8"></script>
15
- <script src="./js/thickbox-compressed.js" type="text/javascript"
16
- charset="utf-8"></script>
17
- <script src="./js/quicksearch.js" type="text/javascript"
18
- charset="utf-8"></script>
19
- <script src="./js/darkfish.js" type="text/javascript"
20
- charset="utf-8"></script>
21
- </head>
22
-
23
- <body class="file">
24
- <div id="metadata">
25
- <div id="home-metadata">
26
- <div id="home-section" class="section">
27
- <h3 class="section-header">
28
- <a href="./index.html">Home</a>
29
- <a href="./index.html#classes">Classes</a>
30
- <a href="./index.html#methods">Methods</a>
31
- </h3>
32
- </div>
33
- </div>
34
-
35
- <div id="project-metadata">
36
-
37
-
38
- <div id="fileindex-section" class="section project-section">
39
- <h3 class="section-header">Files</h3>
40
- <ul>
41
-
42
- <li class="file"><a href="./CHANGES.html">CHANGES</a></li>
43
-
44
- <li class="file"><a href="./LICENSE.html">LICENSE</a></li>
45
-
46
- <li class="file"><a href="./README.html">README</a></li>
47
-
48
- </ul>
49
- </div>
50
-
51
-
52
- <div id="classindex-section" class="section project-section">
53
- <h3 class="section-header">Class Index
54
- <span class="search-toggle"><img src="./images/find.png"
55
- height="16" width="16" alt="[+]"
56
- title="show/hide quicksearch" /></span></h3>
57
- <form action="#" method="get" accept-charset="utf-8" class="initially-hidden">
58
- <fieldset>
59
- <legend>Quicksearch</legend>
60
- <input type="text" name="quicksearch" value=""
61
- class="quicksearch-field" />
62
- </fieldset>
63
- </form>
64
-
65
- <ul class="link-list">
66
-
67
- </ul>
68
- <div id="no-class-search-results" style="display: none;">No matching classes.</div>
69
- </div>
70
-
71
-
72
- </div>
73
- </div>
74
-
75
- <div id="documentation">
76
-
77
- <h1>Changes log for the Taverna via the Web Gem</h1>
78
-
79
- <h2>Version 0.1.1</h2>
80
- <ul><li>
81
- <p>Added config.ru to gem</p>
82
- </li><li>
83
- <p>Removed t2_webap from executables</p>
84
- </li></ul>
85
-
86
- <h2>Version 0.1.0</h2>
87
- <ul><li>
88
- <p>Results are downloaded directly and stored in tmp files - progress cycle
89
- works once</p>
90
- </li><li>
91
- <p>Added rackup configuration file: config.ru</p>
92
- </li><li>
93
- <p>webapp is run using rackup now to enable configuration of web server
94
- timeout</p>
95
- </li><li>
96
- <p>Increased tooltip size and anchored them to the ‘west’</p>
97
- </li><li>
98
- <p>Port is set via: rackup -p 9494</p>
99
- </li></ul>
100
-
101
- <h2>Version 0.0.9</h2>
102
- <ul><li>
103
- <p>Changed “ to ‘ in generate_header_table (header HTML block used in JS
104
- .write(”“) method)</p>
105
- </li><li>
106
- <p>Provided links for acknowledgements in footer</p>
107
- </li></ul>
108
-
109
- <h2>Version 0.0.8</h2>
110
- <ul><li>
111
- <p>Removed “Workflow: ” from form’s header</p>
112
- </li><li>
113
- <p>Changed image for please not bullet points</p>
114
- </li><li>
115
- <p>Cleaned form.haml from old comments</p>
116
- </li><li>
117
- <p>Added footer in form.haml with acknowledgements</p>
118
- </li><li>
119
- <p>Made “workflow by USER” a link to point to user in myExperiment</p>
120
- </li></ul>
121
-
122
- <h2>Version 0.0.7</h2>
123
- <ul><li>
124
- <p>Updated sinatra dependency</p>
125
- </li><li>
126
- <p>Updated copyright year</p>
127
- </li></ul>
128
-
129
- <h2>Version 0.0.6</h2>
130
- <ul><li>
131
- <p>Initial rdoc documentation</p>
132
- </li></ul>
133
-
134
- <h2>Version 0.0.5</h2>
135
- <ul><li>
136
- <p>Updated to new myexperiment-rest API</p>
137
- </li></ul>
138
-
139
- <h2>Version 0.0.4</h2>
140
- <ul><li>
141
- <p>Improved the UI (added logos, tooltips, changed colours).</p>
142
- </li><li>
143
- <p>Made some code abstractions</p>
144
- </li></ul>
145
-
146
- <h2>Version 0.0.3</h2>
147
- <ul><li>
148
- <p>Improved the UI (changed divs with frames).</p>
149
- </li></ul>
150
-
151
- <h2>Version 0.0.2</h2>
152
- <ul><li>
153
- <p>Added upload functionality option for each input.</p>
154
- </li></ul>
155
-
156
- <h2>Version 0.0.1</h2>
157
- <ul><li>
158
- <p>Works. Very basic functionality and UI.</p>
159
- </li></ul>
160
-
161
- </div>
162
-
163
- <div id="validator-badges">
164
- <p><small><a href="http://validator.w3.org/check/referer">[Validate]</a></small></p>
165
- <p><small>Generated with the <a href="http://deveiate.org/projects/Darkfish-Rdoc/">Darkfish
166
- Rdoc Generator</a> 2</small>.</p>
167
- </div>
168
- </body>
169
- </html>
170
-
@@ -1,111 +0,0 @@
1
- <?xml version="1.0" encoding="utf-8"?>
2
- <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN"
3
- "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd">
4
-
5
- <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
6
- <head>
7
- <meta content="text/html; charset=UTF-8" http-equiv="Content-Type" />
8
-
9
- <title>File: LICENSE [web-t2 Docs]</title>
10
-
11
- <link type="text/css" media="screen" href="./rdoc.css" rel="stylesheet" />
12
-
13
- <script src="./js/jquery.js" type="text/javascript"
14
- charset="utf-8"></script>
15
- <script src="./js/thickbox-compressed.js" type="text/javascript"
16
- charset="utf-8"></script>
17
- <script src="./js/quicksearch.js" type="text/javascript"
18
- charset="utf-8"></script>
19
- <script src="./js/darkfish.js" type="text/javascript"
20
- charset="utf-8"></script>
21
- </head>
22
-
23
- <body class="file">
24
- <div id="metadata">
25
- <div id="home-metadata">
26
- <div id="home-section" class="section">
27
- <h3 class="section-header">
28
- <a href="./index.html">Home</a>
29
- <a href="./index.html#classes">Classes</a>
30
- <a href="./index.html#methods">Methods</a>
31
- </h3>
32
- </div>
33
- </div>
34
-
35
- <div id="project-metadata">
36
-
37
-
38
- <div id="fileindex-section" class="section project-section">
39
- <h3 class="section-header">Files</h3>
40
- <ul>
41
-
42
- <li class="file"><a href="./CHANGES.html">CHANGES</a></li>
43
-
44
- <li class="file"><a href="./LICENSE.html">LICENSE</a></li>
45
-
46
- <li class="file"><a href="./README.html">README</a></li>
47
-
48
- </ul>
49
- </div>
50
-
51
-
52
- <div id="classindex-section" class="section project-section">
53
- <h3 class="section-header">Class Index
54
- <span class="search-toggle"><img src="./images/find.png"
55
- height="16" width="16" alt="[+]"
56
- title="show/hide quicksearch" /></span></h3>
57
- <form action="#" method="get" accept-charset="utf-8" class="initially-hidden">
58
- <fieldset>
59
- <legend>Quicksearch</legend>
60
- <input type="text" name="quicksearch" value=""
61
- class="quicksearch-field" />
62
- </fieldset>
63
- </form>
64
-
65
- <ul class="link-list">
66
-
67
- </ul>
68
- <div id="no-class-search-results" style="display: none;">No matching classes.</div>
69
- </div>
70
-
71
-
72
- </div>
73
- </div>
74
-
75
- <div id="documentation">
76
-
77
- <h2>t2-web </h2>
78
-
79
- <p>The MIT License</p>
80
-
81
- <p>Copyright © 2010 - Netherlands Bioinformatics Centre</p>
82
-
83
- <p>Permission is hereby granted, free of charge, to any person obtaining a
84
- copy of this software and associated documentation files (the
85
- “Software”), to deal in the Software without restriction, including
86
- without limitation the rights to use, copy, modify, merge, publish,
87
- distribute, sublicense, and/or sell copies of the Software, and to permit
88
- persons to whom the Software is furnished to do so, subject to the
89
- following conditions:</p>
90
-
91
- <p>The above copyright notice and this permission notice shall be included in
92
- all copies or substantial portions of the Software.</p>
93
-
94
- <p>THE SOFTWARE IS PROVIDED “AS IS”, WITHOUT WARRANTY OF ANY KIND, EXPRESS
95
- OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
96
- FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
97
- AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
98
- LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
99
- FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
100
- DEALINGS IN THE SOFTWARE.</p>
101
-
102
- </div>
103
-
104
- <div id="validator-badges">
105
- <p><small><a href="http://validator.w3.org/check/referer">[Validate]</a></small></p>
106
- <p><small>Generated with the <a href="http://deveiate.org/projects/Darkfish-Rdoc/">Darkfish
107
- Rdoc Generator</a> 2</small>.</p>
108
- </div>
109
- </body>
110
- </html>
111
-