t2-web 0.1.1 → 0.1.2

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (115) hide show
  1. data/CHANGES +3 -1
  2. data/README +3 -3
  3. data/Rakefile +1 -1
  4. data/bin/t2_webapp.rb +5 -5
  5. data/public/{css → t2web/css}/form.css +0 -0
  6. data/public/t2web/css/results.css +29 -0
  7. data/public/{css → t2web/css}/results_header.css +0 -0
  8. data/public/{css → t2web/css}/results_navigation.css +0 -0
  9. data/public/{css → t2web/css}/tipsy.css +0 -0
  10. data/public/{images → t2web/images}/bullet_go.png +0 -0
  11. data/public/{images → t2web/images}/lumc_logo2.png +0 -0
  12. data/public/{images → t2web/images}/nbic_logo.gif +0 -0
  13. data/public/{images → t2web/images}/snake_transparent.gif +0 -0
  14. data/public/{images → t2web/images}/tipsy.gif +0 -0
  15. data/public/{scripts → t2web/scripts}/form.js +0 -0
  16. data/public/{scripts → t2web/scripts}/jquery-1.6.1.js +0 -0
  17. data/public/{scripts → t2web/scripts}/jquery.tipsy.js +0 -0
  18. data/public/{scripts → t2web/scripts}/results.js +0 -0
  19. data/views/form.haml +9 -9
  20. data/views/results.haml +3 -3
  21. metadata +19 -112
  22. data/doc/classes/WebT2App.html +0 -1123
  23. data/doc/classes/WebT2App.src/M000001.html +0 -18
  24. data/doc/classes/WebT2App.src/M000002.html +0 -25
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  52. data/doc/classes/WebT2App.src/M000030.html +0 -23
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  58. data/doc/classes/WebT2App.src/M000036.html +0 -18
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  70. data/doc/classes/WebT2App.src/M000048.html +0 -18
  71. data/doc/classes/WebT2App.src/M000049.html +0 -32
  72. data/doc/classes/WebT2App.src/M000050.html +0 -27
  73. data/doc/created.rid +0 -1
  74. data/doc/files/bin/t2_webapp_rb.html +0 -115
  75. data/doc/files/pkg/t2-web-0_0_2/bin/web_t2_service_rb.html +0 -114
  76. data/doc/files/pkg/t2-web-0_0_3/bin/t2_webapp_rb.html +0 -115
  77. data/doc/files/pkg/t2-web-0_0_3/bin/web_t2_service_rb.html +0 -114
  78. data/doc/files/pkg/t2-web-0_0_4/bin/t2_webapp_rb.html +0 -115
  79. data/doc/files/pkg/t2-web-0_0_5/bin/t2_webapp_rb.html +0 -115
  80. data/doc/fr_class_index.html +0 -27
  81. data/doc/fr_file_index.html +0 -32
  82. data/doc/fr_method_index.html +0 -76
  83. data/doc/index.html +0 -24
  84. data/doc/rdoc/CHANGES.html +0 -170
  85. data/doc/rdoc/LICENSE.html +0 -111
  86. data/doc/rdoc/README.html +0 -142
  87. data/doc/rdoc/created.rid +0 -4
  88. data/doc/rdoc/images/brick.png +0 -0
  89. data/doc/rdoc/images/brick_link.png +0 -0
  90. data/doc/rdoc/images/bug.png +0 -0
  91. data/doc/rdoc/images/bullet_black.png +0 -0
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  94. data/doc/rdoc/images/date.png +0 -0
  95. data/doc/rdoc/images/find.png +0 -0
  96. data/doc/rdoc/images/loadingAnimation.gif +0 -0
  97. data/doc/rdoc/images/macFFBgHack.png +0 -0
  98. data/doc/rdoc/images/package.png +0 -0
  99. data/doc/rdoc/images/page_green.png +0 -0
  100. data/doc/rdoc/images/page_white_text.png +0 -0
  101. data/doc/rdoc/images/page_white_width.png +0 -0
  102. data/doc/rdoc/images/plugin.png +0 -0
  103. data/doc/rdoc/images/ruby.png +0 -0
  104. data/doc/rdoc/images/tag_green.png +0 -0
  105. data/doc/rdoc/images/wrench.png +0 -0
  106. data/doc/rdoc/images/wrench_orange.png +0 -0
  107. data/doc/rdoc/images/zoom.png +0 -0
  108. data/doc/rdoc/index.html +0 -115
  109. data/doc/rdoc/js/darkfish.js +0 -116
  110. data/doc/rdoc/js/jquery.js +0 -32
  111. data/doc/rdoc/js/quicksearch.js +0 -114
  112. data/doc/rdoc/js/thickbox-compressed.js +0 -10
  113. data/doc/rdoc/rdoc.css +0 -763
  114. data/doc/rdoc-style.css +0 -208
  115. data/public/images/info.png +0 -0
data/doc/classes/WebT2App.src/M000046.html DELETED
@@ -1,18 +0,0 @@
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- <?xml version="1.0" encoding="iso-8859-1"?>
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- <!DOCTYPE html
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- PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
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- "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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-
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- <html>
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- <head>
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- <title>generate_header_table (WebT2App)</title>
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- <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
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- <link rel="stylesheet" href="../.././rdoc-style.css" type="text/css" media="screen" />
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- </head>
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- <body class="standalone-code">
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- <pre><span class="ruby-comment cmt"># File pkg/t2-web-0.0.5/bin/t2_webapp.rb, line 75</span>
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- <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">generate_header_table</span>(<span class="ruby-identifier">my_exp_wkf</span>, <span class="ruby-identifier">my_exp_usr</span>)
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- <span class="ruby-value str">&quot; &lt;div id='header'&gt;\n &lt;table class='header'&gt;\n &lt;tr&gt;\n &lt;td&gt;\n &lt;img alt='NBIC logo' src='/images/nbic_logo.gif' /&gt;\n &lt;/td&gt;\n &lt;td&gt;\n &lt;table class='header-title'&gt;\n &lt;tr&gt;\n &lt;td class='header-title'&gt;Workflow: \#{@my_exp_wkf.title}&lt;/td&gt;\n &lt;/tr&gt;\n &lt;tr&gt;\n &lt;td class='right'&gt;workflow by \#{@my_exp_usr.name}&lt;/td&gt;\n\n &lt;/tr&gt;\n &lt;/table&gt;\n &lt;/td&gt;\n &lt;td&gt;\n &lt;img alt='LUMC logo' class='right' src='/images/lumc_logo2.png' /&gt;\n &lt;/td&gt;\n &lt;/tr&gt;\n &lt;/table&gt;\n &lt;/div&gt;\n&quot;</span>
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- <span class="ruby-keyword kw">end</span></pre>
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- </body>
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- </html>
data/doc/classes/WebT2App.src/M000047.html DELETED
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- <?xml version="1.0" encoding="iso-8859-1"?>
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- <!DOCTYPE html
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- PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
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- "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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-
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- <html>
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- <head>
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- <title>generate_label_tooltip (WebT2App)</title>
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- <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
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- <link rel="stylesheet" href="../.././rdoc-style.css" type="text/css" media="screen" />
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- </head>
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- <body class="standalone-code">
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- <pre><span class="ruby-comment cmt"># File pkg/t2-web-0.0.5/bin/t2_webapp.rb, line 106</span>
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- <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">generate_label_tooltip</span>(<span class="ruby-identifier">input</span>)
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- <span class="ruby-value str">&quot;Description: &quot;</span> <span class="ruby-operator">&lt;&lt;</span> <span class="ruby-constant">CGI</span><span class="ruby-operator">::</span><span class="ruby-identifier">unescapeHTML</span>(<span class="ruby-identifier">input</span>.<span class="ruby-identifier">descriptions</span>[<span class="ruby-value">0</span>])
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- <span class="ruby-keyword kw">end</span></pre>
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- </body>
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- </html>
data/doc/classes/WebT2App.src/M000048.html DELETED
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- <?xml version="1.0" encoding="iso-8859-1"?>
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- "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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- <html>
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- <head>
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- <title>generate_textarea_tooltip (WebT2App)</title>
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- <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
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- <link rel="stylesheet" href="../.././rdoc-style.css" type="text/css" media="screen" />
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- </head>
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- <body class="standalone-code">
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- <pre><span class="ruby-comment cmt"># File pkg/t2-web-0.0.5/bin/t2_webapp.rb, line 111</span>
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- <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">generate_textarea_tooltip</span>(<span class="ruby-identifier">input</span>)
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- <span class="ruby-value str">&quot;Example: &quot;</span> <span class="ruby-operator">&lt;&lt;</span> <span class="ruby-constant">CGI</span><span class="ruby-operator">::</span><span class="ruby-identifier">unescapeHTML</span>(<span class="ruby-identifier">input</span>.<span class="ruby-identifier">examples</span>[<span class="ruby-value">0</span>])
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- <span class="ruby-keyword kw">end</span></pre>
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- </body>
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- </html>
data/doc/classes/WebT2App.src/M000049.html DELETED
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- <?xml version="1.0" encoding="iso-8859-1"?>
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- "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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-
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- <html>
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- <head>
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- <title>generate_data_navigation_frame (WebT2App)</title>
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- <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
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- <link rel="stylesheet" href="../.././rdoc-style.css" type="text/css" media="screen" />
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- </head>
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- <body class="standalone-code">
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- <pre><span class="ruby-comment cmt"># File pkg/t2-web-0.0.5/bin/t2_webapp.rb, line 117</span>
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- <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">generate_data_navigation_frame</span>(<span class="ruby-identifier">my_exp_wkf</span>, <span class="ruby-identifier">uuid</span>, <span class="ruby-identifier">wid</span>, <span class="ruby-identifier">wkf_version</span>, <span class="ruby-identifier">t2_server</span>, <span class="ruby-identifier">finished_execution</span>)
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-
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- <span class="ruby-identifier">data_navigation_frame</span> = <span class="ruby-value str">&quot;&lt;html&gt;&lt;head&gt;&lt;link href='/css/results_navigation.css' rel='stylesheet'/&gt;&lt;/head&gt;&lt;body&gt;&lt;table&gt;&quot;</span>
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- <span class="ruby-keyword kw">if</span> <span class="ruby-identifier">my_exp_wkf</span>.<span class="ruby-identifier">outputs</span>.<span class="ruby-identifier">size</span> <span class="ruby-operator">&gt;=</span><span class="ruby-value">1</span>
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- <span class="ruby-identifier">my_exp_wkf</span>.<span class="ruby-identifier">outputs</span>.<span class="ruby-identifier">each</span> <span class="ruby-keyword kw">do</span> <span class="ruby-operator">|</span><span class="ruby-identifier">output</span><span class="ruby-operator">|</span>
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- <span class="ruby-identifier">data_navigation_frame</span> <span class="ruby-operator">&lt;&lt;</span> <span class="ruby-value str">&quot;&lt;tr&gt;&quot;</span>
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- <span class="ruby-keyword kw">if</span> <span class="ruby-identifier">finished_execution</span>
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- <span class="ruby-identifier">data_navigation_frame</span> <span class="ruby-operator">&lt;&lt;</span> <span class="ruby-node">&quot;&lt;td&gt;&lt;a href='javascript:void(0);' onclick='parent.getSampleOutput(\\\&quot;#{t2_server}\\\&quot;, \\\&quot;#{uuid}\\\&quot;, &quot;</span> <span class="ruby-operator">&lt;&lt;</span>
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- <span class="ruby-node">&quot;\\\&quot;#{output.name}\\\&quot;, \\\&quot;#{wid}\\\&quot;, \\\&quot;#{wkf_version}\\\&quot;);'&gt;#{output.name}&lt;/a&gt;&lt;/td&gt;&lt;td&gt;&lt;/td&gt;&quot;</span>
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- <span class="ruby-keyword kw">else</span>
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- <span class="ruby-identifier">data_navigation_frame</span> <span class="ruby-operator">&lt;&lt;</span> <span class="ruby-node">&quot;&lt;td&gt;#{output.name}&lt;/td&gt;&lt;td&gt;&lt;img src='/images/snake_transparent.gif' alt='Loading Content...'&gt;&lt;/td&gt;&quot;</span>
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- <span class="ruby-keyword kw">end</span>
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- <span class="ruby-identifier">data_navigation_frame</span> <span class="ruby-operator">&lt;&lt;</span> <span class="ruby-value str">&quot;&lt;/tr&gt;&quot;</span>
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- <span class="ruby-keyword kw">end</span>
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- <span class="ruby-keyword kw">end</span>
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- <span class="ruby-identifier">data_navigation_frame</span> <span class="ruby-operator">&lt;&lt;</span> <span class="ruby-value str">&quot;&lt;/table&gt;&lt;/body&gt;&lt;/html&gt;&quot;</span>
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- <span class="ruby-keyword kw">end</span></pre>
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- </body>
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- <pre><span class="ruby-comment cmt"># File pkg/t2-web-0.0.5/bin/t2_webapp.rb, line 137</span>
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- <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">generate_html_result</span>(<span class="ruby-identifier">data</span>)
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- <span class="ruby-identifier">html</span> = <span class="ruby-value str">&quot;&quot;</span>
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- <span class="ruby-comment cmt">#p data</span>
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- <span class="ruby-keyword kw">if</span> <span class="ruby-identifier">data</span>.<span class="ruby-identifier">instance_of?</span> <span class="ruby-constant">Array</span>
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- <span class="ruby-identifier">html</span> = <span class="ruby-identifier">data</span>.<span class="ruby-identifier">flatten</span>.<span class="ruby-identifier">join</span>(<span class="ruby-value str">'&lt;br&gt;'</span>)
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- <span class="ruby-keyword kw">elsif</span> <span class="ruby-identifier">data</span>.<span class="ruby-identifier">instance_of?</span> <span class="ruby-constant">String</span>
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- <span class="ruby-identifier">html</span> = <span class="ruby-identifier">data</span>.<span class="ruby-identifier">gsub</span>(<span class="ruby-regexp re">/[\n]/</span>, <span class="ruby-value str">'&lt;br&gt;'</span>)
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- <span class="ruby-keyword kw">else</span>
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- <span class="ruby-identifier">html</span> = <span class="ruby-identifier">data</span>
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- <span class="ruby-keyword kw">end</span>
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- <span class="ruby-identifier">html</span>
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- <span class="ruby-keyword kw">end</span></pre>
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- Tue, 06 Mar 2012 15:25:28 +0100
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- <div id="fileHeader">
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- <h1>t2_webapp.rb</h1>
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- <table class="header-table">
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- <tr class="top-aligned-row">
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- <td><strong>Path:</strong></td>
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- <td>bin/t2_webapp.rb
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- </td>
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- </tr>
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- <tr class="top-aligned-row">
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- <td><strong>Last Update:</strong></td>
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- <td>Mon Feb 13 15:18:41 +0100 2012</td>
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- </tr>
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- </table>
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- </div>
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- <!-- banner header -->
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- <div id="requires-list">
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- <h3 class="section-bar">Required files</h3>
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- <div class="name-list">
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- rubygems&nbsp;&nbsp;
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- sinatra&nbsp;&nbsp;
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- haml&nbsp;&nbsp;
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- open-uri&nbsp;&nbsp;
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- rest-client&nbsp;&nbsp;
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- t2-server&nbsp;&nbsp;
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- myexperiment-rest&nbsp;&nbsp;
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- cgi&nbsp;&nbsp;
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- </div>
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- </div>
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- </div>
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- rubygems&nbsp;&nbsp;
77
- sinatra&nbsp;&nbsp;
78
- haml&nbsp;&nbsp;
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- rest-open-uri&nbsp;&nbsp;
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- rest-client&nbsp;&nbsp;
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- t2-server&nbsp;&nbsp;
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- myexperiment-rest&nbsp;&nbsp;
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- rubygems&nbsp;&nbsp;
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- sinatra&nbsp;&nbsp;
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- haml&nbsp;&nbsp;
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- rest-client&nbsp;&nbsp;
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- <div class="name-list">
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- rubygems&nbsp;&nbsp;
77
- sinatra&nbsp;&nbsp;
78
- haml&nbsp;&nbsp;
79
- rest-open-uri&nbsp;&nbsp;
80
- rest-client&nbsp;&nbsp;
81
- t2-server&nbsp;&nbsp;
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- myexperiment-rest&nbsp;&nbsp;
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