sufia 6.0.0 → 6.1.0

data/sufia-models/app/models/proxy_deposit_rights.rb

@@ -1,4 +0,0 @@
-class ProxyDepositRights < ActiveRecord::Base
-  belongs_to :grantor, class_name: "User"
-  belongs_to :grantee, class_name: "User"
-end

data/sufia-models/app/models/single_use_link.rb

@@ -1,42 +0,0 @@
-class SingleUseLink < ActiveRecord::Base
-
-  validate :expiration_date_cannot_be_in_the_past
-  validate :cannot_be_destroyed
-
-  after_initialize :set_defaults
-
-  def create_for_path path
-    self.class.create itemId: itemId, path: path
-  end
-
-  def expired?
-    DateTime.now > expires
-  end
-
-
-  def to_param
-    downloadKey
-  end
-
-  protected
-
-  def expiration_date_cannot_be_in_the_past
-    if expired?
-       errors.add(:expires, "can't be in the past")
-    end
-  end
-
-  def cannot_be_destroyed
-    if destroyed?
-      errors[:base] << "Single Use Link has already been used"
-    end
-  end
-
-  def set_defaults
-    if new_record?
-      self.expires ||= DateTime.now.advance(hours:24)
-      self.downloadKey ||= (Digest::SHA2.new << rand(1000000000).to_s).to_s
-    end
-  end
-
-end

data/sufia-models/app/models/subject_local_authority_entry.rb

@@ -1,2 +0,0 @@
-class SubjectLocalAuthorityEntry < ActiveRecord::Base
-end

data/sufia-models/app/models/sufia/avatar_uploader.rb

@@ -1,20 +0,0 @@
-class Sufia::AvatarUploader < CarrierWave::Uploader::Base
-  include CarrierWave::MiniMagick
-  include CarrierWave::Compatibility::Paperclip
-
-  version :medium do
-    process resize_to_limit: [300, 300]
-  end
-
-  version :thumb do
-    process resize_to_limit: [100, 100]
-  end
-
-  def default_url
-    "missing_#{version_name}.png"
-  end
-
-  def extension_white_list
-    %w(jpg jpeg png gif bmp tif tiff)
-  end
-end

data/sufia-models/app/models/sufia/avatar_validator.rb

@@ -1,8 +0,0 @@
-module Sufia
-  class AvatarValidator < ActiveModel::Validator
-    def validate(record)
-      return unless record.avatar?
-      record.errors.add(:avatar_file_size, 'must be less than 2MB') if record.avatar.size > 2.megabytes.to_i
-    end
-  end
-end

data/sufia-models/app/models/sufia/collection.rb

@@ -1,5 +0,0 @@
-module Sufia
-  class Collection < ActiveFedora::Base
-    include Sufia::CollectionBehavior
-  end
-end

data/sufia-models/app/models/sufia/download.rb

@@ -1,9 +0,0 @@
-module Sufia
-  class Download
-    extend Legato::Model
-
-    metrics :totalEvents
-    dimensions :eventCategory, :eventAction, :eventLabel, :date
-    filter :for_file, &lambda {|id| matches(:eventLabel, id)}
-  end 
-end

data/sufia-models/app/models/sufia/orcid_validator.rb

@@ -1,12 +0,0 @@
-module Sufia
-  class OrcidValidator < ActiveModel::Validator
-    def validate(record)
-      return if record.orcid.blank?
-      record.errors.add(:orcid, 'must be a string of 19 characters, e.g., "0000-0000-0000-0000"') unless self.class.match(record.orcid)
-    end
-
-    def self.match(string)
-      /\d{4}-\d{4}-\d{4}-\d{3}[\dX]/.match(string)
-    end
-  end
-end

data/sufia-models/app/models/sufia/pageview.rb

@@ -1,9 +0,0 @@
-module Sufia
-  class Pageview
-    extend Legato::Model
-
-    metrics :pageviews
-    dimensions :date
-    filter :for_path, &lambda { |path| contains(:pagePath, path) }
-  end
-end

data/sufia-models/app/models/trophy.rb

@@ -1,10 +0,0 @@
-class Trophy < ActiveRecord::Base
-  validate :count_within_limit, on: :create
-
-  def count_within_limit
-    if Trophy.where(user_id:self.user_id).count >= 5
-      errors.add(:base, "Exceeded trophy limit")
-    end
-  end
-end
-

data/sufia-models/app/models/user_stat.rb

@@ -1,2 +0,0 @@
-class UserStat < ActiveRecord::Base
-end

data/sufia-models/app/models/version_committer.rb

@@ -1,2 +0,0 @@
-class VersionCommitter < ActiveRecord::Base
-end

data/sufia-models/app/services/sufia/analytics.rb

@@ -1,50 +0,0 @@
-require 'google/api_client'
-require 'oauth2'
-require 'legato'
-
-module Sufia
-  module Analytics
-    # Loads configuration options from config/analytics.yml. Expected structure:
-    # `analytics:`
-    # `  app_name: GOOGLE_OAUTH_APP_NAME`
-    # `  app_version: GOOGLE_OAUTH_APP_VERSION`
-    # `  privkey_path: GOOGLE_OAUTH_PRIVATE_KEY_PATH`
-    # `  privkey_secret: GOOGLE_OAUTH_PRIVATE_KEY_SECRET`
-    # `  client_email: GOOGLE_OAUTH_CLIENT_EMAIL`
-    # @return [Hash] A hash containing five keys: 'app_name', 'app_version', 'client_email', 'privkey_path', 'privkey_secret'
-    def self.config
-      @config ||= YAML.load(File.read(File.join(Rails.root, 'config', 'analytics.yml')))['analytics']
-    end
-
-    # Generate an OAuth2 token for Google Analytics
-    # @return [OAuth2::AccessToken] An OAuth2 access token for GA
-    def self.token
-      scope = 'https://www.googleapis.com/auth/analytics.readonly'
-      client = Google::APIClient.new(application_name: self.config['app_name'],
-        application_version: self.config['app_version'])
-      key = Google::APIClient::PKCS12.load_key(self.config['privkey_path'],
-        self.config['privkey_secret'])
-      service_account = Google::APIClient::JWTAsserter.new(self.config['client_email'], scope,
-        key)
-      client.authorization = service_account.authorize
-      oauth_client = OAuth2::Client.new('', '', {
-          authorize_url: 'https://accounts.google.com/o/oauth2/auth',
-          token_url: 'https://accounts.google.com/o/oauth2/token'})
-      OAuth2::AccessToken.new(oauth_client, client.authorization.access_token)
-    end
-
-    # Return a user object linked to a Google Analytics account
-    # @return [Legato::User] A user account wit GA access
-    def self.user
-      Legato::User.new(self.token)
-    end
-
-    # Return a Google Analytics profile matching specified ID
-    # @ return [Legato::Management::Profile] A user profile associated with GA
-    def self.profile
-      self.user.profiles.detect do |profile|
-        profile.web_property_id == Sufia.config.google_analytics_id
-      end
-    end
-  end
-end

data/sufia-models/app/services/sufia/generic_file_audit_service.rb

@@ -1,83 +0,0 @@
-module Sufia
-  class GenericFileAuditService
-    attr_reader :generic_file
-    def initialize(file)
-      @generic_file = file
-    end
-
-    NO_RUNS = 999
-
-    # provides a human readable version of the audit status
-    def human_readable_audit_status
-      stat = audit_stat
-      case stat
-        when 0
-          'failing'
-        when 1
-          'passing'
-        else
-          stat
-      end
-    end
-
-    # TODO: Run audits on all attached files. We're only auditing "content" at tht moment
-    # Pushes an AuditJob for each version of content if it hasn't been audited recently
-    # Returns the set of most recent audit status for each version of the content file
-    def audit
-      audit_content([])
-    end
-
-
-    private
-      def audit_content(log)
-        if generic_file.content.has_versions?
-          audit_file_versions("content", log)
-        else
-          log << audit_file("content", generic_file.content.uri)
-        end
-      end
-
-      def audit_file_versions file, log
-        generic_file.attached_files[file].versions.all.each do |version|
-          log << audit_file(file, version.uri,  version.label)
-        end
-        log
-      end
-
-      def audit_stat
-        audit_results = audit.collect { |result| result["pass"] }
-
-        # check how many non runs we had
-        non_runs = audit_results.reduce(0) { |sum, value| value == NO_RUNS ? sum += 1 : sum }
-        if non_runs == 0
-          audit_results.reduce(true) { |sum, value| sum && value }
-        elsif non_runs < audit_results.length
-          result = audit_results.reduce(true) { |sum, value| value == NO_RUNS ? sum : sum && value }
-          "Some audits have not been run, but the ones run were #{result ? 'passing' : 'failing'}."
-        else
-          'Audits have not yet been run on this file.'
-        end
-      end
-
-      def audit_file(file, uri, label = nil)
-        latest_audit = ChecksumAuditLog.logs_for(generic_file.id, file).first
-        return latest_audit unless needs_audit?(latest_audit)
-        Sufia.queue.push(AuditJob.new(generic_file.id, file, uri))
-        latest_audit || ChecksumAuditLog.new(pass: NO_RUNS, generic_file_id: generic_file.id, dsid: file, version: label)
-      end
-
-      def needs_audit?(latest_audit)
-        return true unless latest_audit
-        unless latest_audit.updated_at
-          logger.warn "***AUDIT*** problem with audit log! Latest Audit is not nil, but updated_at is not set #{latest_audit}"
-          return true
-        end
-        days_since_last_audit(latest_audit) >= Sufia.config.max_days_between_audits
-      end
-
-      def days_since_last_audit(latest_audit)
-        (DateTime.now - latest_audit.updated_at.to_date).to_i
-      end
-
-  end
-end

data/sufia-models/app/services/sufia/generic_file_indexing_service.rb

@@ -1,12 +0,0 @@
-module Sufia
-  class GenericFileIndexingService < ActiveFedora::IndexingService
-    def generate_solr_document
-      super.tap do |solr_doc|
-        solr_doc[Solrizer.solr_name('label')] = object.label
-        solr_doc[Solrizer.solr_name('file_format')] = object.file_format
-        solr_doc[Solrizer.solr_name('file_format', :facetable)] = object.file_format
-        solr_doc['all_text_timv'] = object.full_text.content
-      end
-    end
-  end
-end

data/sufia-models/app/services/sufia/id_service.rb

@@ -1,45 +0,0 @@
-require 'noid'
-
-module Sufia
-  module IdService
-
-    def self.noid_template
-      Sufia.config.noid_template
-    end
-
-    @minter = ::Noid::Minter.new(template: noid_template)
-    @semaphore = Mutex.new
-    def self.valid?(identifier)
-      # remove the fedora namespace since it's not part of the noid
-      noid = identifier#.split(":").last
-      @minter.valid? noid
-    end
-    def self.mint
-      @semaphore.synchronize do
-        while true
-          id = self.next_id
-          return id unless ActiveFedora::Base.exists?(id)
-        end
-      end
-    end
-
-    protected
-
-    def self.next_id
-      id = ''
-      File.open(Sufia.config.minter_statefile, File::RDWR|File::CREAT, 0644) do |f|
-        f.flock(File::LOCK_EX)
-        yaml = YAML::load(f.read)
-        yaml = {template: noid_template} unless yaml
-        minter = ::Noid::Minter.new(yaml)
-        id = minter.mint
-        f.rewind
-        yaml = YAML::dump(minter.dump)
-        f.write yaml
-        f.flush
-        f.truncate(f.pos)
-      end
-      id
-    end
-  end
-end

data/sufia-models/app/services/sufia/noid.rb

@@ -1,22 +0,0 @@
-module Sufia
-  module Noid
-    extend ActiveSupport::Concern
-
-    ## This overrides the default behavior, which is to ask Fedora for an id
-    # @see ActiveFedora::Persistence.assign_id
-    def assign_id
-      Sufia::IdService.mint if Sufia.config.enable_noids
-    end
-
-    def to_param
-      id
-    end
-
-    class << self
-      # Create a pairtree like path for the given identifier
-      def treeify(identifier)
-        (identifier.scan(/..?/).first(4) + [identifier]).join('/')
-      end
-    end
-  end
-end

data/sufia-models/app/services/sufia/repository_audit_service.rb

@@ -1,9 +0,0 @@
-module Sufia
-  class RepositoryAuditService
-    def self.audit_everything
-      ::GenericFile.find_each do |gf|
-        gf.audit
-      end
-    end
-  end
-end

data/sufia-models/config/locales/sufia.en.yml

@@ -1,6 +0,0 @@
-en:
-  sufia:
-    product_name:       "Sufia"
-    product_twitter_handle: "@HydraSphere"
-    institution_name:   "Institution Name"
-    institution_name_full: "The Institution Name"

data/sufia-models/lib/generators/sufia/models/abstract_migration_generator.rb

@@ -1,30 +0,0 @@
-# -*- encoding : utf-8 -*-
-require 'rails/generators'
-require 'rails/generators/migration'
-
-class Sufia::Models::AbstractMigrationGenerator < Rails::Generators::Base
-  include Rails::Generators::Migration
-
-  # Implement the required interface for Rails::Generators::Migration.
-  # taken from http://github.com/rails/rails/blob/master/activerecord/lib/generators/active_record.rb
-  def self.next_migration_number(path)
-    if @prev_migration_nr
-      @prev_migration_nr += 1
-    else
-      if last_migration = Dir[File.join(path, '*.rb')].sort.last
-        @prev_migration_nr = last_migration.sub(File.join(path, '/'), '').to_i + 1
-      else
-        @prev_migration_nr = Time.now.utc.strftime("%Y%m%d%H%M%S").to_i
-      end
-    end
-    @prev_migration_nr.to_s
-  end
-
-  protected
-
-  def better_migration_template(file)
-    migration_template "migrations/#{file}", "db/migrate/#{file}"
-  rescue Rails::Generators::Error => e
-    say_status("warning", e.message, :yellow)
-  end
-end

data/sufia-models/lib/generators/sufia/models/cached_stats_generator.rb

@@ -1,24 +0,0 @@
-require_relative 'abstract_migration_generator'
-
-class Sufia::Models::CachedStatsGenerator < Sufia::Models::AbstractMigrationGenerator
-  source_root File.expand_path('../templates', __FILE__)
-
-  desc """
-This generator adds the ability to cache usage stats to your application:
- 1. Creates several database migrations if they do not exist in /db/migrate
-       """
-
-  def banner
-    say_status("warning", "ADDING STATS CACHING-RELATED SUFIA MODELS", :yellow)
-  end
-
-  # Setup the database migrations
-  def copy_migrations
-    [
-      'create_file_view_stats.rb',
-      'create_file_download_stats.rb'
-    ].each do |file|
-      better_migration_template file
-    end
-  end
-end

data/sufia-models/lib/generators/sufia/models/fulltext_generator.rb

@@ -1,27 +0,0 @@
-# -*- encoding : utf-8 -*-
-require 'rails/generators'
-
-class Sufia::Models::FulltextGenerator < Rails::Generators::Base
-  source_root File.expand_path('../templates', __FILE__)
-
-  desc """
-This generator makes the following changes to your application:
- 1. Copies solrconfig.xml into solr_conf/conf/
- 2. Reconfigures jetty
-       """
-
-  def banner
-    say_status("warning", "GENERATING SUFIA FULL-TEXT", :yellow)
-  end
-
-  # Copy Sufia's solrconfig into the dir from which the jetty:config task pulls
-  # Sufia's solrconfig includes full-text extraction
-  def copy_solr_config
-    copy_file 'config/solrconfig.xml', 'solr_conf/conf/solrconfig.xml', force: true
-  end
-
-  # Copy config, schema, and jars into jetty dir if it exists
-  def reconfigure_jetty
-    rake "sufia:jetty:config" if File.directory?('jetty')
-  end
-end