sufia 0.0.1.pre1 → 0.0.1.pre2

data/.rvmrc

@@ -1,59 +0,0 @@
-#!/usr/bin/env bash
-
-# This is an RVM Project .rvmrc file, used to automatically load the ruby
-# development environment upon cd'ing into the directory
-
-# First we specify our desired <ruby>[@<gemset>], the @gemset name is optional.
-environment_id="ruby-1.9.3-p125@scholarsphere"
-rubygems_version="1.8.23"
-
-# Install rubies when used instead of only displaying a warning and exiting
-rvm_install_on_use_flag=1
-
-#
-# Uncomment following line if you want options to be set only for given project.
-#
-# PROJECT_JRUBY_OPTS=( --1.9 )
-
-#
-# First we attempt to load the desired environment directly from the environment
-# file. This is very fast and efficient compared to running through the entire
-# CLI and selector. If you want feedback on which environment was used then
-# insert the word 'use' after --create as this triggers verbose mode.
-#
-if [[ -d "${rvm_path:-$HOME/.rvm}/environments" \
-  && -s "${rvm_path:-$HOME/.rvm}/environments/$environment_id" ]] ; then
-  \. "${rvm_path:-$HOME/.rvm}/environments/$environment_id"
-
-  if [[ -s "${rvm_path:-$HOME/.rvm}/hooks/after_use" ]]; then
-    . "${rvm_path:-$HOME/.rvm}/hooks/after_use"
-  fi
-else
-  # If the environment file has not yet been created, use the RVM CLI to select.
-  if ! rvm --create  "$environment_id"; then
-    echo "Failed to create RVM environment '${environment_id}'."
-    exit 1
-  fi
-fi
-
-#
-# If you use an RVM gemset file to install a list of gems (*.gems), you can have
-# it be automatically loaded. Uncomment the following and adjust the filename if
-# necessary.
-#
-# filename=".gems"
-# if [[ -s "$filename" ]] ; then
-#   rvm gemset import "$filename" | grep -v already | grep -v listed | grep -v complete | sed '/^$/d'
-# fi
-
-# Use the specified rubygems_version
-if [[ -n "${rubygems_version}" && ("$(gem --version)" != ${rubygems_version}) ]] ; then
-  rvm rubygems "${rubygems_version}"
-fi
-
-# Ensure that Bundler is installed, install it if it is not.
-if ! (command -v bundle > /dev/null) ; then
-  printf "The rubygem 'bundler' is not installed, installing it now.\n"
-  gem install bundler
-fi
-

data/LICENSE

@@ -1,22 +0,0 @@
-Copyright (c) 2012 TODO: Write your name
-
-MIT License
-
-Permission is hereby granted, free of charge, to any person obtaining
-a copy of this software and associated documentation files (the
-"Software"), to deal in the Software without restriction, including
-without limitation the rights to use, copy, modify, merge, publish,
-distribute, sublicense, and/or sell copies of the Software, and to
-permit persons to whom the Software is furnished to do so, subject to
-the following conditions:
-
-The above copyright notice and this permission notice shall be
-included in all copies or substantial portions of the Software.
-
-THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
-EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
-MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
-NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE
-LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION
-OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION
-WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.

data/lib/generators/sufia/templates/config/active_fedora_base_redis.rb

@@ -1,54 +0,0 @@
-# Copyright © 2012 The Pennsylvania State University
-#
-# Licensed under the Apache License, Version 2.0 (the "License");
-# you may not use this file except in compliance with the License.
-# You may obtain a copy of the License at
-#
-# http://www.apache.org/licenses/LICENSE-2.0
-#
-# Unless required by applicable law or agreed to in writing, software
-# distributed under the License is distributed on an "AS IS" BASIS,
-# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
-# See the License for the specific language governing permissions and
-# limitations under the License.
-
-require 'nest'
-
-ActiveFedora::Base.class_eval do
-  def stream
-    Nest.new(self.class.name, $redis)[to_param]
-  rescue
-    nil
-  end
-
-  def self.stream
-    Nest.new(name, $redis)
-  rescue
-    nil
-  end
-
-  def events(size=-1)
-    stream[:event].lrange(0, size).map do |event_id|
-      {
-        action: $redis.hget("events:#{event_id}", "action"),
-        timestamp: $redis.hget("events:#{event_id}", "timestamp")
-      }
-    end
-  rescue
-    []
-  end
-
-  def create_event(action, timestamp)
-    event_id = $redis.incr("events:latest_id")
-    $redis.hmset("events:#{event_id}", "action", action, "timestamp", timestamp)
-    event_id
-  rescue
-    nil
-  end
-
-  def log_event(event_id)
-    stream[:event].lpush(event_id)
-  rescue
-    nil
-  end
-end

data/lib/sufia/ldap.rb

@@ -1,123 +0,0 @@
-# A bucket to put ldap related methods into the user module
-module Sufia::Ldap
-
-  module User 
-    extend ActiveSupport::Concern
-    included do
-      # Workaround to retry LDAP calls a number of times
-      include ::Sufia::Utils
-    end
-    def populate_attributes
-      #update exist cache
-      exist = ldap_exist!
-      logger.warn "No ldapentry exists for #{login}" unless exist
-      return unless exist
-
-      begin
-        entry = directory_attributes.first
-      rescue
-        logger.warn "Error getting directory entry: #{Hydra::LDAP.connection.get_operation_result.message}"
-        return
-      end
-      attrs = {}
-      attrs[:email] = entry[:mail].first rescue nil
-      attrs[:display_name] = entry[:displayname].first rescue nil
-      attrs[:address] = entry[:postaladdress].first.gsub('$', "\n") rescue nil
-      attrs[:admin_area] = entry[:psadminarea].first rescue nil
-      attrs[:department] = entry[:psdepartment].first rescue nil
-      attrs[:title] = entry[:title].first rescue nil
-      attrs[:office] = entry[:psofficelocation].first.gsub('$', "\n") rescue nil
-      attrs[:chat_id] = entry[:pschatname].first rescue nil
-      attrs[:website] = entry[:labeleduri].first.gsub('$', "\n") rescue nil
-      attrs[:affiliation] = entry[:edupersonprimaryaffiliation].first rescue nil
-      attrs[:telephone] = entry[:telephonenumber].first rescue nil
-      update_attributes(attrs)
-
-      # update the group cache also
-      groups!
-    end
-
-    def ldap_exist?
-      if (ldap_last_update.blank? || ((Time.now-ldap_last_update) > 24*60*60 ))
-        return ldap_exist!
-      end
-      return ldap_available
-    end
-
-    def ldap_exist!
-      exist = retry_unless(7.times, lambda { Hydra::LDAP.connection.get_operation_result.code == 53 }) do
-        Hydra::LDAP.does_user_exist?(Net::LDAP::Filter.eq('uid', login))
-      end rescue false
-      if Hydra::LDAP.connection.get_operation_result.code == 0
-        logger.debug "exist = #{exist}"
-        attrs = {}
-        attrs[:ldap_available] = exist
-        attrs[:ldap_last_update] = Time.now
-        update_attributes(attrs)
-        # TODO: Should we retry here if the code is 51-53???
-      else
-        logger.warn "LDAP error checking exists for #{login}, reason (code: #{Hydra::LDAP.connection.get_operation_result.code}): #{Hydra::LDAP.connection.get_operation_result.message}"
-        return false
-      end
-      return exist
-    end
-
-    def directory_attributes(attrs=[])
-      UserLdap.directory_attributes(login, attrs)
-    end
-
-    # Groups that user is a member of
-    def groups
-      if (groups_last_update.blank? || ((Time.now-groups_last_update) > 24*60*60 ))
-        return groups!
-      end
-      return self.group_list.split(";?;")
-    end
-
-    def groups!
-      list = self.class.groups(login)
-
-      if Hydra::LDAP.connection.get_operation_result.code == 0
-        list.sort!
-        logger.debug "groups = #{list}"
-        attrs = {}
-        attrs[:ldap_na] = false
-        attrs[:group_list] = list.join(";?;")
-        attrs[:groups_last_update] = Time.now
-        update_attributes(attrs)
-        # TODO: Should we retry here if the code is 51-53???
-      else
-        logger.warn "Error getting groups for #{login} reason: #{Hydra::LDAP.connection.get_operation_result.message}"
-        return []
-      end
-      return list
-    end
-
-    module ClassMethods
-      def directory_attributes(login, attrs=[])
-        attrs = retry_unless(7.times, lambda { Hydra::LDAP.connection.get_operation_result.code == 53 }) do
-          Hydra::LDAP.get_user(Net::LDAP::Filter.eq('uid', login), attrs)
-        end rescue []
-        return attrs
-      end
-
-      def groups(login)
-        groups = retry_unless(7.times, lambda { Hydra::LDAP.connection.get_operation_result.code == 53 }) do
-          Hydra::LDAP.groups_for_user(Net::LDAP::Filter.eq('uid', login)) do |result|
-            result.first[:psmemberof].select{ |y| y.starts_with? 'cn=umg/' }.map{ |x| x.sub(/^cn=/, '').sub(/,dc=psu,dc=edu/, '') }
-          end rescue []
-        end
-        return groups
-      end
-    end
-
-  end
-
-  module Controller
-    def has_access?
-      unless current_user.ldap_exist?
-        render :template => '/error/401', :layout => "error", :formats => [:html], :status => 401
-      end
-    end
-  end
-end

data/spec/fixtures/hydra_test_default_partials.foxml.xml

@@ -1,80 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<foxml:digitalObject VERSION="1.1" PID="hydra:test_default_partials" xmlns:foxml="info:fedora/fedora-system:def/foxml#" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="info:fedora/fedora-system:def/foxml# http://www.fedora.info/definitions/1/0/foxml1-1.xsd">
-  <foxml:objectProperties>
-    <foxml:property NAME="info:fedora/fedora-system:def/model#state" VALUE="Active"/>
-    <foxml:property NAME="info:fedora/fedora-system:def/model#label" VALUE=""/>
-    <foxml:property NAME="info:fedora/fedora-system:def/model#ownerId" VALUE="fedoraAdmin"/>
-    <foxml:property NAME="info:fedora/fedora-system:def/model#createdDate" VALUE="2011-07-14T12:34:56.666Z"/>
-    <foxml:property NAME="info:fedora/fedora-system:def/view#lastModifiedDate" VALUE="2011-07-14T12:34:56.666Z"/>
-  </foxml:objectProperties>
-  
-  <foxml:datastream ID="DC" STATE="A" CONTROL_GROUP="X" VERSIONABLE="true">
-    <foxml:datastreamVersion ID="DC1.0" LABEL="Dublin Core Record for this object" CREATED="2011-07-14T12:34:56.666Z" MIMETYPE="text/xml" FORMAT_URI="http://www.openarchives.org/OAI/2.0/oai_dc/" SIZE="406">
-      <foxml:xmlContent>
-        <oai_dc:dc xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:oai_dc="http://www.openarchives.org/OAI/2.0/oai_dc/" xmlns:srw_dc="info:srw/schema/1/dc-schema" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
-          xsi:schemaLocation="http://www.openarchives.org/OAI/2.0/oai_dc/ http://www.openarchives.org/OAI/2.0/oai_dc.xsd">
-          <dc:identifier>hydra:test_default_partials</dc:identifier>
-          <dc:description>a hydra test object with an (active)fedora model that has no specialized view partials</dc:description>
-        </oai_dc:dc>
-      </foxml:xmlContent>
-    </foxml:datastreamVersion>
-  </foxml:datastream>
-  
-  <foxml:datastream ID="RELS-EXT" STATE="A" CONTROL_GROUP="X" VERSIONABLE="true">
-    <foxml:datastreamVersion ID="RELS-EXT.0" LABEL="" CREATED="2011-07-14T12:34:56.666Z" MIMETYPE="text/xml" SIZE="302">
-      <foxml:xmlContent>
-        <rdf:RDF xmlns:fedora-model="info:fedora/fedora-system:def/model#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:rel="info:fedora/fedora-system:def/relations-external#" xmlns:hydra="http://projecthydra.org/ns/relations#">
-          <rdf:Description rdf:about="info:fedora/hydra:test_default_partials">
-            <hasModel xmlns="info:fedora/fedora-system:def/relations-external#" rdf:resource="info:fedora/afmodel:CommonMetadataAsset"></hasModel>
-          </rdf:Description>
-        </rdf:RDF>
-      </foxml:xmlContent>
-    </foxml:datastreamVersion>
-  </foxml:datastream>
-  
-  <foxml:datastream ID="descMetadata" STATE="A" CONTROL_GROUP="X" VERSIONABLE="true">
-    <foxml:datastreamVersion ID="descMetadata.0" LABEL="" CREATED="2011-07-14T12:34:56.666Z" MIMETYPE="text/xml" SIZE="276">
-      <foxml:xmlContent>
-        <mods:mods xmlns:mods="http://www.loc.gov/mods/v3" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" version="3.3" xsi:schemaLocation="http://www.loc.gov/mods/v3 http://www.loc.gov/standards/mods/v3/mods-3-3.xsd">
-          <mods:titleInfo>
-            <mods:title>test object for default partials</mods:title>
-          </mods:titleInfo>
-          <mods:abstract>a hydra test object with an (active)fedora model that has no specialized view partials</mods:abstract>
-          <mods:identifier type="local">hydra:test_default_partials</mods:identifier>
-        </mods:mods>
-      </foxml:xmlContent>
-    </foxml:datastreamVersion>
-  </foxml:datastream>
-  
-  <foxml:datastream ID="rightsMetadata" STATE="A" CONTROL_GROUP="X" VERSIONABLE="true">
-    <foxml:datastreamVersion ID="rightsMetadata.0" LABEL="" CREATED="2011-07-14T12:34:56.666Z" MIMETYPE="text/xml" SIZE="302">
-      <foxml:xmlContent>
-        <rightsMetadata xmlns="http://hydra-collab.stanford.edu/schemas/rightsMetadata/v1" version="0.1">
-          <access type="discover">
-            <machine>
-              <group>public</group>
-            </machine>
-          </access>
-          <access type="read">
-            <human/>
-            <machine>
-              <group>researcher</group>
-              <group>public</group>
-              <group>patron</group>
-              <group>donor</group>
-            </machine>
-          </access>
-          <access type="edit">
-            <human/>
-            <machine>
-              <person>archivist1</person>
-              <group>archivist</group>
-              <group>admin_policy_object_editor</group>
-            </machine>
-          </access>
-        </rightsMetadata>
-      </foxml:xmlContent>
-    </foxml:datastreamVersion>
-  </foxml:datastream>
-  
- </foxml:digitalObject> 

data/spec/fixtures/hydra_test_generic_content.foxml.xml

@@ -1,138 +0,0 @@
-<?xml version="1.0" encoding="UTF-8"?>
-<foxml:digitalObject VERSION="1.1" PID="hydra:test_generic_content" xmlns:foxml="info:fedora/fedora-system:def/foxml#" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="info:fedora/fedora-system:def/foxml# http://www.fedora.info/definitions/1/0/foxml1-1.xsd">
-  <foxml:objectProperties>
-    <foxml:property NAME="info:fedora/fedora-system:def/model#state" VALUE="Active"/>
-    <foxml:property NAME="info:fedora/fedora-system:def/model#label" VALUE=""/>
-    <foxml:property NAME="info:fedora/fedora-system:def/model#ownerId" VALUE="fedoraAdmin"/>
-    <foxml:property NAME="info:fedora/fedora-system:def/model#createdDate" VALUE="2011-07-14T01:28:47.221Z"/>
-    <foxml:property NAME="info:fedora/fedora-system:def/view#lastModifiedDate" VALUE="2011-07-14T01:30:56.432Z"/>
-  </foxml:objectProperties>
-  <foxml:datastream ID="DC" STATE="A" CONTROL_GROUP="X" VERSIONABLE="true">
-    <foxml:datastreamVersion ID="DC1.0" LABEL="Dublin Core Record for this object" CREATED="2011-07-14T01:28:47.221Z" MIMETYPE="text/xml" FORMAT_URI="http://www.openarchives.org/OAI/2.0/oai_dc/" SIZE="341">
-      <foxml:xmlContent>
-        <oai_dc:dc xmlns:oai_dc="http://www.openarchives.org/OAI/2.0/oai_dc/" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.openarchives.org/OAI/2.0/oai_dc/ http://www.openarchives.org/OAI/2.0/oai_dc.xsd">
-          <dc:identifier>hydra:test_generic_content</dc:identifier>
-          <dc:description>A test object using the GenericContent (active)fedora model</dc:description>
-        </oai_dc:dc>
-      </foxml:xmlContent>
-    </foxml:datastreamVersion>
-  </foxml:datastream>
-  <foxml:datastream ID="descMetadata" STATE="A" CONTROL_GROUP="X" VERSIONABLE="true">
-    <foxml:datastreamVersion ID="descMetadata.1" LABEL="" CREATED="2011-07-14T01:30:13.169Z" MIMETYPE="text/xml" SIZE="1552">
-      <foxml:xmlContent>
-        <mods xmlns="http://www.loc.gov/mods/v3" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" version="3.3" xsi:schemaLocation="http://www.loc.gov/mods/v3 http://www.loc.gov/standards/mods/v3/mods-3-3.xsd">
-          <titleInfo lang="">
-            <title>generic content</title>
-          </titleInfo>
-          <name type="personal">
-            <namePart type="given">Orlob</namePart>
-            <namePart type="family">Gryphon</namePart>
-            <affiliation>Fantasy</affiliation>
-            <role>
-              <roleTerm authority="marcrelator" type="text"/>
-            </role>
-            <description>Mythical Creatures</description>
-          </name>
-          <typeOfResource/>
-          <genre authority="marcgt"/>
-          <language>
-            <languageTerm authority="iso639-2b" type="code"/>
-          </language>
-          <physicalDescription>
-            <extent/>
-          </physicalDescription>
-          <abstract>A test object using the GenericContent (active)fedora model</abstract>
-          <subject>
-            <topic>flying creatures</topic>
-          </subject>
-          <relatedItem type="host">
-            <titleInfo>
-              <title/>
-            </titleInfo>
-            <identifier type="issn"/>
-            <originInfo>
-              <publisher/>
-              <dateIssued/>
-            </originInfo>
-            <part>
-              <detail type="volume">
-                <number/>
-              </detail>
-              <detail type="number">
-                <number/>
-              </detail>
-              <extent unit="pages">
-                <start/>
-                <end/>
-              </extent>
-              <date/>
-            </part>
-          </relatedItem>
-          <location>
-            <url/>
-          </location>
-        </mods>
-      </foxml:xmlContent>
-    </foxml:datastreamVersion>
-  </foxml:datastream>
-  <foxml:datastream ID="RELS-EXT" STATE="A" CONTROL_GROUP="X" VERSIONABLE="true">
-    <foxml:datastreamVersion ID="RELS-EXT.0" LABEL="" CREATED="2011-07-14T01:28:49.031Z" MIMETYPE="text/xml" SIZE="277">
-      <foxml:xmlContent>
-        <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#">
-          <rdf:Description rdf:about="info:fedora/hydra:test_generic_content">
-            <hasModel xmlns="info:fedora/fedora-system:def/model#" rdf:resource="info:fedora/afmodel:GenericContent"/>
-          </rdf:Description>
-        </rdf:RDF>
-      </foxml:xmlContent>
-    </foxml:datastreamVersion>
-  </foxml:datastream>
-  <foxml:datastream ID="rightsMetadata" STATE="A" CONTROL_GROUP="X" VERSIONABLE="true">
-     <foxml:datastreamVersion ID="rightsMetadata.1" LABEL="" CREATED="2011-07-14T01:30:56.432Z" MIMETYPE="text/xml" SIZE="777">
-      <foxml:xmlContent>
-        <rightsMetadata xmlns="http://hydra-collab.stanford.edu/schemas/rightsMetadata/v1" version="0.1">
-          <copyright>
-            <human/>
-            <machine>
-              <uvalicense>no</uvalicense>
-            </machine>
-          </copyright>
-          <access type="discover">
-            <human/>
-            <machine/>
-          </access>
-          <access type="read">
-            <human/>
-            <machine>
-              <group>researcher</group>
-              <group>public</group>
-              <group>patron</group>
-              <group>donor</group>
-            </machine>
-          </access>
-          <access type="edit">
-            <human/>
-            <machine>
-              <person>archivist1</person>
-              <group>archivist</group>
-              <group>admin_policy_object_editor</group>
-            </machine>
-          </access>
-          <embargo>
-            <human/>
-            <machine/>
-          </embargo>
-        </rightsMetadata>
-      </foxml:xmlContent>
-    </foxml:datastreamVersion>
-  </foxml:datastream>
-  <foxml:datastream ID="properties" STATE="A" CONTROL_GROUP="X" VERSIONABLE="true">
-    <foxml:datastreamVersion ID="properties.0" LABEL="" CREATED="2011-07-14T01:28:49.367Z" MIMETYPE="text/xml" SIZE="99">
-      <foxml:xmlContent>
-        <fields>
-          <collection>generic_content</collection>
-          <depositor>archivist1</depositor>
-        </fields>
-      </foxml:xmlContent>
-    </foxml:datastreamVersion>
-  </foxml:datastream>
-</foxml:digitalObject>