stash-merritt 0.0.1

data/stash-merritt.ipr

@@ -0,0 +1,127 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<project version="4">
+  <component name="CompilerConfiguration">
+    <wildcardResourcePatterns>
+      <entry name="!?*.java" />
+      <entry name="!?*.form" />
+      <entry name="!?*.class" />
+      <entry name="!?*.groovy" />
+      <entry name="!?*.scala" />
+      <entry name="!?*.flex" />
+      <entry name="!?*.kt" />
+      <entry name="!?*.clj" />
+      <entry name="!?*.aj" />
+      <entry name="!?*.ceylon" />
+    </wildcardResourcePatterns>
+  </component>
+  <component name="CopyrightManager" default="" />
+  <component name="EmacsSettings">
+    <option name="emacsPath" value="/usr/bin/emacs" />
+  </component>
+  <component name="Encoding">
+    <file url="PROJECT" charset="UTF-8" />
+  </component>
+  <component name="GradleLocalSettings">
+    <option name="modificationStamps">
+      <map>
+        <entry key="$USER_HOME$/Dropbox/Personal/Work/III/dev/III/sierra-api" value="4174126313000" />
+        <entry key="$USER_HOME$/Projects/apsu-devel-scala" value="14577450991000" />
+        <entry key="$USER_HOME$/Projects/conditrix" value="1458232668000" />
+        <entry key="$USER_HOME$/Projects/content-disposition-test" value="1466799471000" />
+        <entry key="$USER_HOME$/Projects/ephemera-places" value="2869141444000" />
+        <entry key="$USER_HOME$/Projects/fffppp-scala" value="2909057274000" />
+        <entry key="$USER_HOME$/Projects/lingtoolkit" value="1455838165000" />
+        <entry key="$USER_HOME$/Projects/np" value="2861856364000" />
+        <entry key="$USER_HOME$/Projects/orbits" value="1468174713000" />
+        <entry key="$USER_HOME$/Projects/paleo" value="5912776364000" />
+        <entry key="$USER_HOME$/Projects/protocolizer" value="1463774499000" />
+        <entry key="$USER_HOME$/Projects/scala-enum" value="2869161406000" />
+        <entry key="$USER_HOME$/Projects/scala-json-table-schema" value="1466004799000" />
+        <entry key="$USER_HOME$/Projects/scala-project-template" value="1455300816000" />
+        <entry key="$USER_HOME$/Projects/scratch" value="2916856355000" />
+        <entry key="$USER_HOME$/Projects/wfc-scala" value="1475271445000" />
+        <entry key="$PROJECT_DIR$/../Dash/ResourceSync/bindings" value="2859322410000" />
+        <entry key="$PROJECT_DIR$/../EOT/eoth-tools" value="2884512223000" />
+        <entry key="$PROJECT_DIR$/../rowell" value="2958666172000" />
+      </map>
+    </option>
+    <option name="externalProjectsViewState">
+      <projects_view />
+    </option>
+  </component>
+  <component name="InspectionProjectProfileManager">
+    <profile version="1.0">
+      <option name="myName" value="Project Default" />
+      <inspection_tool class="LoggerInitializedWithForeignClass" enabled="false" level="WARNING" enabled_by_default="false">
+        <option name="loggerClassName" value="org.apache.log4j.Logger,org.slf4j.LoggerFactory,org.apache.commons.logging.LogFactory,java.util.logging.Logger" />
+        <option name="loggerFactoryMethodName" value="getLogger,getLogger,getLog,getLogger" />
+      </inspection_tool>
+      <inspection_tool class="RubyClassVariableUsageInspection" enabled="false" level="WARNING" enabled_by_default="false" />
+      <inspection_tool class="RubyQuotedStringsInspection" enabled="true" level="WARNING" enabled_by_default="true" />
+      <inspection_tool class="RubyResolve" enabled="true" level="WEAK WARNING" enabled_by_default="true">
+        <option name="warnImplicitResults" value="false" />
+      </inspection_tool>
+      <inspection_tool class="RubyStringKeysInHashInspection" enabled="false" level="WARNING" enabled_by_default="false" />
+      <inspection_tool class="RubyTooManyInstanceVariablesInspection" enabled="false" level="WARNING" enabled_by_default="false" />
+      <inspection_tool class="RubyUnusedLocalVariable" enabled="true" level="WEAK WARNING" enabled_by_default="true" />
+      <inspection_tool class="SpellCheckingInspection" enabled="false" level="TYPO" enabled_by_default="false">
+        <option name="processCode" value="true" />
+        <option name="processLiterals" value="true" />
+        <option name="processComments" value="true" />
+      </inspection_tool>
+    </profile>
+    <version value="1.0" />
+  </component>
+  <component name="ProjectCodeStyleSettingsManager">
+    <option name="PER_PROJECT_SETTINGS">
+      <value />
+    </option>
+    <option name="PREFERRED_PROJECT_CODE_STYLE" value="Default (5)" />
+  </component>
+  <component name="ProjectModuleManager">
+    <modules>
+      <module fileurl="file://$PROJECT_DIR$/stash-merritt.iml" filepath="$PROJECT_DIR$/stash-merritt.iml" />
+    </modules>
+  </component>
+  <component name="ProjectRootManager" version="2" languageLevel="JDK_1_3" default="false" project-jdk-name="RVM: ruby-2.2.5 [global]" project-jdk-type="RUBY_SDK">
+    <output url="file://$PROJECT_DIR$/out" />
+  </component>
+  <component name="PropertiesComponent">
+    <property name="settings.editor.selected.configurable" value="ics" />
+  </component>
+  <component name="SbtLocalSettings">
+    <option name="modificationStamps">
+      <map>
+        <entry key="$USER_HOME$/Projects/fffppp-scala" value="1463702660000" />
+        <entry key="$USER_HOME$/Scratch/banana-rdf" value="2946409964000" />
+        <entry key="$USER_HOME$/Scratch/scalafx-ensemble" value="1456441591000" />
+        <entry key="$PROJECT_DIR$/../rowell" value="1471475006000" />
+      </map>
+    </option>
+    <option name="externalProjectsViewState">
+      <projects_view />
+    </option>
+  </component>
+  <component name="ScalaSbtSettings">
+    <option name="vmParameters" value="" />
+  </component>
+  <component name="VcsDirectoryMappings">
+    <mapping directory="" vcs="Git" />
+  </component>
+  <component name="masterDetails">
+    <states>
+      <state key="ProjectJDKs.UI">
+        <settings>
+          <last-edited>1.8</last-edited>
+          <splitter-proportions>
+            <option name="proportions">
+              <list>
+                <option value="0.2" />
+              </list>
+            </option>
+          </splitter-proportions>
+        </settings>
+      </state>
+    </states>
+  </component>
+</project>

data/travis-local-deps.sh

@@ -0,0 +1,43 @@
+#!/usr/bin/env bash
+
+set -e
+
+BRANCH=${TRAVIS_PULL_REQUEST_BRANCH:-$TRAVIS_BRANCH}
+ENGINES_DIR=$(realpath ..)/stash_engines
+
+# ############################################################
+# stash_engine
+
+mkdir ${ENGINES_DIR}
+cd ${ENGINES_DIR}
+echo "Cloning stash_engine into $(pwd)"
+git clone https://github.com/CDLUC3/stash_engine.git
+cd stash_engine
+git checkout ${BRANCH}
+
+SE_REVISION=$(git rev-parse HEAD)
+echo "Checked out stash_engine branch ${BRANCH}, revision ${SE_REVISION}"
+
+# ############################################################
+# stash_discovery
+
+cd ${ENGINES_DIR}
+echo "Cloning stash_discovery into $(pwd)"
+git clone https://github.com/CDLUC3/stash_discovery.git
+cd stash_discovery
+git checkout ${BRANCH}
+
+SD_REVISION=$(git rev-parse HEAD)
+echo "Checked out stash_discovery branch ${BRANCH}, revision ${SD_REVISION}"
+
+# ############################################################
+# stash_datacite
+
+cd ${ENGINES_DIR}
+echo "Cloning stash_datacite into $(pwd)"
+git clone https://github.com/CDLUC3/stash_datacite.git
+cd stash_datacite
+git checkout ${BRANCH}
+
+SD_REVISION=$(git rev-parse HEAD)
+echo "Checked out stash_datacite branch ${BRANCH}, revision ${SD_REVISION}"

metadata

@@ -0,0 +1,337 @@
+--- !ruby/object:Gem::Specification
+name: stash-merritt
+version: !ruby/object:Gem::Version
+  version: 0.0.1
+platform: ruby
+authors:
+- David Moles
+autorequire: 
+bindir: bin
+cert_chain: []
+date: 2017-02-03 00:00:00.000000000 Z
+dependencies:
+- !ruby/object:Gem::Dependency
+  name: rubyzip
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '1.1'
+  type: :runtime
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '1.1'
+- !ruby/object:Gem::Dependency
+  name: stash_ezid_datacite
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '0.1'
+  type: :runtime
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '0.1'
+- !ruby/object:Gem::Dependency
+  name: stash_datacite
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
+  type: :runtime
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
+- !ruby/object:Gem::Dependency
+  name: stash_engine
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
+  type: :runtime
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
+- !ruby/object:Gem::Dependency
+  name: bundler
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '1.7'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '1.7'
+- !ruby/object:Gem::Dependency
+  name: rake
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '10.4'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '10.4'
+- !ruby/object:Gem::Dependency
+  name: rspec
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '3.2'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '3.2'
+- !ruby/object:Gem::Dependency
+  name: simplecov
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: 0.9.2
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: 0.9.2
+- !ruby/object:Gem::Dependency
+  name: simplecov-console
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: 0.2.0
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: 0.2.0
+- !ruby/object:Gem::Dependency
+  name: rubocop
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '0.47'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '0.47'
+- !ruby/object:Gem::Dependency
+  name: yard
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '0.8'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '0.8'
+- !ruby/object:Gem::Dependency
+  name: database_cleaner
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '1.5'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '1.5'
+- !ruby/object:Gem::Dependency
+  name: diffy
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '3.1'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '3.1'
+- !ruby/object:Gem::Dependency
+  name: equivalent-xml
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: 0.6.0
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: 0.6.0
+- !ruby/object:Gem::Dependency
+  name: mysql2
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '0.3'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '0.3'
+- !ruby/object:Gem::Dependency
+  name: webmock
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '1.24'
+  type: :development
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - "~>"
+      - !ruby/object:Gem::Version
+        version: '1.24'
+description: Packaging and SWORD deposit module for submitting Stash datasets to Merritt
+email:
+- david.moles@ucop.edu
+executables: []
+extensions: []
+extra_rdoc_files: []
+files:
+- ".gitignore"
+- ".rubocop.yml"
+- ".ruby-version"
+- ".travis.yml"
+- Gemfile
+- Gemfile.lock
+- LICENSE.md
+- README.md
+- Rakefile
+- lib/datacite/mapping/datacite_xml_factory.rb
+- lib/stash.rb
+- lib/stash/merritt.rb
+- lib/stash/merritt/ezid_helper.rb
+- lib/stash/merritt/module_info.rb
+- lib/stash/merritt/repository.rb
+- lib/stash/merritt/submission_job.rb
+- lib/stash/merritt/submission_package.rb
+- lib/stash/merritt/submission_package/data_one_manifest_builder.rb
+- lib/stash/merritt/submission_package/merritt_datacite_builder.rb
+- lib/stash/merritt/submission_package/merritt_delete_builder.rb
+- lib/stash/merritt/submission_package/merritt_oaidc_builder.rb
+- lib/stash/merritt/submission_package/stash_wrapper_builder.rb
+- lib/stash/merritt/sword_helper.rb
+- spec/.rubocop.yml
+- spec/config/app_config.yml
+- spec/config/database.yml
+- spec/config/licenses.yml
+- spec/data/archive.zip
+- spec/data/archive/mrt-datacite.xml
+- spec/data/archive/mrt-dataone-manifest.txt
+- spec/data/archive/mrt-oaidc.xml
+- spec/data/archive/stash-wrapper.xml
+- spec/data/dc4-with-funding-references.xml
+- spec/db/datacite/mapping/datacite_xml_factory_spec.rb
+- spec/db/stash/merritt/merritt_oaidc_builder_spec.rb
+- spec/db/stash/merritt/submission_package_spec.rb
+- spec/db/stash/merritt/sword_helper_spec.rb
+- spec/db_spec_helper.rb
+- spec/rspec_custom_matchers.rb
+- spec/spec_helper.rb
+- spec/unit/stash/merritt/ezid_helper_spec.rb
+- spec/unit/stash/merritt/repository_spec.rb
+- spec/unit/stash/merritt/submission_job_spec.rb
+- spec/util/resource_builder.rb
+- stash-merritt.gemspec
+- stash-merritt.iml
+- stash-merritt.ipr
+- travis-local-deps.sh
+homepage: http://github.com/stash-merritt
+licenses:
+- MIT
+metadata: {}
+post_install_message: 
+rdoc_options: []
+require_paths:
+- lib
+required_ruby_version: !ruby/object:Gem::Requirement
+  requirements:
+  - - ">="
+    - !ruby/object:Gem::Version
+      version: '0'
+required_rubygems_version: !ruby/object:Gem::Requirement
+  requirements:
+  - - ">="
+    - !ruby/object:Gem::Version
+      version: '0'
+requirements: []
+rubyforge_project: 
+rubygems_version: 2.6.8
+signing_key: 
+specification_version: 4
+summary: Merritt integration for Stash
+test_files:
+- spec/.rubocop.yml
+- spec/config/app_config.yml
+- spec/config/database.yml
+- spec/config/licenses.yml
+- spec/data/archive.zip
+- spec/data/archive/mrt-datacite.xml
+- spec/data/archive/mrt-dataone-manifest.txt
+- spec/data/archive/mrt-oaidc.xml
+- spec/data/archive/stash-wrapper.xml
+- spec/data/dc4-with-funding-references.xml
+- spec/db/datacite/mapping/datacite_xml_factory_spec.rb
+- spec/db/stash/merritt/merritt_oaidc_builder_spec.rb
+- spec/db/stash/merritt/submission_package_spec.rb
+- spec/db/stash/merritt/sword_helper_spec.rb
+- spec/db_spec_helper.rb
+- spec/rspec_custom_matchers.rb
+- spec/spec_helper.rb
+- spec/unit/stash/merritt/ezid_helper_spec.rb
+- spec/unit/stash/merritt/repository_spec.rb
+- spec/unit/stash/merritt/submission_job_spec.rb
+- spec/util/resource_builder.rb