stamina 0.4.0 → 0.5.0

data/CHANGELOG.md

@@ -1,4 +1,22 @@
-# 0.4.0 / FIX ME
+# 0.5.0 / FIX ME
+
+* Breaking features.
+
+  * Support for ruby 1.8.7 has been definitely removed.
+
+* Major enhancements
+
+  * The project has been split in different sub gems (core, induction and gui). This
+    implies a lot of internal changes, but the public API has not been affected. A main
+    'stamina' gem automatically includes all sub gems so previous behavior is guaranteed.
+
+* Minor enhancements
+    * Fixed a bug with bundler usage in main stamina binary
+    * adl2dot command now support samples as input in addition to automata. In that case,
+      the dot result models a PTA (prefix tree acceptor)
+    * Added --png to 'stamina adl2dot'
+
+# 0.4.0 / 2011-05-01
 
 * Major Enhancements
 
@@ -8,9 +26,9 @@
     * Added Automaton stripping (removal of unreachable states) under Automaton#strip[!]
     * Added Automaton minimization (Hopcroft + Pitchies) under Automaton#minimize
     * Added Abbadingo generators under Abbadingo::RandomDFA and Abbadingo::RandomSample
-    * Added a main 'stamina' command relying on Quickl. classiy/adl2dot commands become 
+    * Added a main 'stamina' command relying on Quickl. classiy/adl2dot commands become
       subcommands of stamina itself (see stamina --help for a list of available commands).
-      Induction command (rpni and redblue) are now handled by a 'stamina infer' with 
+      Induction command (rpni and redblue) are now handled by a 'stamina infer' with
       options.
     * Error states and now correctly handled in ADL::parse and ADL::flush
     * RedBlue has been renamed as BlueFringe everywhere (red_?blue -> blue_fringe)
@@ -57,5 +75,4 @@
 
 # 0.2.1 / 2010-05-01
 
-* Main public version for the official competition, extracted from private SVN.
-
+* Main public version for the official competition, extracted from private SVN.

data/LICENCE.md

@@ -1,6 +1,6 @@
 The MIT License
 
-Copyright (c) 2008-2009 University of Louvain 
+Copyright (c) 2008-2009 University of Louvain
 (Universite catholique de Louvain-la-Neuve, Belgium)
 
 Permission is hereby granted, free of charge, to any person obtaining a copy
@@ -19,4 +19,4 @@ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
 AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
 LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
 OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
-THE SOFTWARE.
+THE SOFTWARE.

data/bin/stamina

@@ -1,10 +1,4 @@
 #!/usr/bin/env ruby
-require 'rubygems'
-require 'bundler'
-Bundler.setup(:default)
-
 $LOAD_PATH.unshift File.expand_path('../../lib', __FILE__)
-require "stamina/command"
-
+require 'stamina'
 Stamina::Command.run(ARGV, __FILE__)
-

data/lib/stamina.rb

@@ -1,22 +1,13 @@
-module Stamina
-  
-end
-require 'stamina/ext/math'
-require 'stamina/version'
-require 'stamina/loader'
 require 'set'
 require 'enumerator'
 require 'stringio'
-require 'stamina/errors'
-require 'stamina/markable'
-require 'stamina/adl'
-require 'stamina/sample'
-require 'stamina/input_string'
-require 'stamina/classifier'
-require 'stamina/automaton'
-require 'stamina/scoring'
-require 'stamina/utils'
-require 'stamina/induction/union_find'
-require 'stamina/induction/commons'
-require "stamina/induction/rpni"
-require "stamina/induction/blue_fringe"
+
+begin
+  require_relative 'stamina-core/stamina-core'
+  require_relative 'stamina-induction/stamina-induction'
+  require_relative 'stamina-gui/stamina-gui'
+rescue LoadError
+  require 'stamina-core'
+  require 'stamina-induction'
+  require 'stamina-gui'
+end

metadata

@@ -1,364 +1,85 @@
---- !ruby/object:Gem::Specification 
+--- !ruby/object:Gem::Specification
 name: stamina
-version: !ruby/object:Gem::Version 
-  hash: 15
+version: !ruby/object:Gem::Version
+  version: 0.5.0
   prerelease: 
-  segments: 
-  - 0
-  - 4
-  - 0
-  version: 0.4.0
 platform: ruby
-authors: 
+authors:
 - Bernard Lambeau
 autorequire: 
 bindir: bin
 cert_chain: []
-
-date: 2011-05-03 00:00:00 +02:00
-default_executable: 
-dependencies: 
-- !ruby/object:Gem::Dependency 
-  type: :development
-  requirement: &id001 !ruby/object:Gem::Requirement 
+date: 2012-02-24 00:00:00.000000000 Z
+dependencies:
+- !ruby/object:Gem::Dependency
+  name: stamina-core
+  requirement: &70290244526180 !ruby/object:Gem::Requirement
     none: false
-    requirements: 
-    - - ~>
-      - !ruby/object:Gem::Version 
-        hash: 49
-        segments: 
-        - 0
-        - 8
-        - 7
-        version: 0.8.7
-  name: rake
-  version_requirements: *id001
-  prerelease: false
-- !ruby/object:Gem::Dependency 
-  type: :development
-  requirement: &id002 !ruby/object:Gem::Requirement 
-    none: false
-    requirements: 
-    - - ~>
-      - !ruby/object:Gem::Version 
-        hash: 15
-        segments: 
-        - 1
-        - 0
-        version: "1.0"
-  name: bundler
-  version_requirements: *id002
-  prerelease: false
-- !ruby/object:Gem::Dependency 
-  type: :development
-  requirement: &id003 !ruby/object:Gem::Requirement 
-    none: false
-    requirements: 
-    - - ~>
-      - !ruby/object:Gem::Version 
-        hash: 31
-        segments: 
-        - 2
-        - 4
-        - 0
-        version: 2.4.0
-  name: rspec
-  version_requirements: *id003
-  prerelease: false
-- !ruby/object:Gem::Dependency 
-  type: :development
-  requirement: &id004 !ruby/object:Gem::Requirement 
-    none: false
-    requirements: 
-    - - ~>
-      - !ruby/object:Gem::Version 
-        hash: 15
-        segments: 
-        - 0
-        - 6
-        - 4
-        version: 0.6.4
-  name: yard
-  version_requirements: *id004
-  prerelease: false
-- !ruby/object:Gem::Dependency 
-  type: :development
-  requirement: &id005 !ruby/object:Gem::Requirement 
-    none: false
-    requirements: 
-    - - ~>
-      - !ruby/object:Gem::Version 
-        hash: 29
-        segments: 
-        - 2
-        - 0
-        - 9
-        version: 2.0.9
-  name: bluecloth
-  version_requirements: *id005
+    requirements:
+    - - =
+      - !ruby/object:Gem::Version
+        version: 0.5.0
+  type: :runtime
   prerelease: false
-- !ruby/object:Gem::Dependency 
-  type: :development
-  requirement: &id006 !ruby/object:Gem::Requirement 
+  version_requirements: *70290244526180
+- !ruby/object:Gem::Dependency
+  name: stamina-induction
+  requirement: &70290244548420 !ruby/object:Gem::Requirement
     none: false
-    requirements: 
-    - - ~>
-      - !ruby/object:Gem::Version 
-        hash: 53
-        segments: 
-        - 0
-        - 10
-        - 1
-        version: 0.10.1
-  name: wlang
-  version_requirements: *id006
+    requirements:
+    - - =
+      - !ruby/object:Gem::Version
+        version: 0.5.0
+  type: :runtime
   prerelease: false
-- !ruby/object:Gem::Dependency 
-  type: :development
-  requirement: &id007 !ruby/object:Gem::Requirement 
+  version_requirements: *70290244548420
+- !ruby/object:Gem::Dependency
+  name: stamina-gui
+  requirement: &70290244547960 !ruby/object:Gem::Requirement
     none: false
-    requirements: 
-    - - ~>
-      - !ruby/object:Gem::Version 
-        hash: 15
-        segments: 
-        - 2
-        - 3
-        - 6
-        version: 2.3.6
-  name: gnuplot
-  version_requirements: *id007
-  prerelease: false
-- !ruby/object:Gem::Dependency 
+    requirements:
+    - - =
+      - !ruby/object:Gem::Version
+        version: 0.5.0
   type: :runtime
-  requirement: &id008 !ruby/object:Gem::Requirement 
-    none: false
-    requirements: 
-    - - ~>
-      - !ruby/object:Gem::Version 
-        hash: 23
-        segments: 
-        - 0
-        - 2
-        - 0
-        version: 0.2.0
-  name: quickl
-  version_requirements: *id008
   prerelease: false
-description: |-
-  Stamina is an automaton and regular inference toolkit initially developped for the baseline 
-  of the Stamina Competition (stamina.chefbe.net).
-email: 
+  version_requirements: *70290244547960
+description: ! "Stamina is an automaton and regular inference toolkit initially developped
+  for the \nbaseline of the Stamina Competition (stamina.chefbe.net)."
+email:
 - blambeau@gmail.com
-executables: 
+executables:
 - stamina
 extensions: []
-
-extra_rdoc_files: 
-- README.md
-- CHANGELOG.md
+extra_rdoc_files: []
+files:
 - LICENCE.md
-files: 
+- CHANGELOG.md
 - bin/stamina
-- example/adl/automaton.adl
-- example/adl/sample.adl
-- example/basic/characteristic_sample.adl
-- example/basic/target.adl
-- example/competition/31_test.adl
-- example/competition/31_training.adl
 - lib/stamina.rb
-- lib/stamina/adl.rb
-- lib/stamina/automaton.rb
-- lib/stamina/automaton/walking.rb
-- lib/stamina/automaton/metrics.rb
-- lib/stamina/automaton/complete.rb
-- lib/stamina/automaton/minimize.rb
-- lib/stamina/automaton/equivalence.rb
-- lib/stamina/automaton/minimize/hopcroft.rb
-- lib/stamina/automaton/minimize/pitchies.rb
-- lib/stamina/automaton/strip.rb
-- lib/stamina/classifier.rb
-- lib/stamina/command/score.rb
-- lib/stamina/command/infer.rb
-- lib/stamina/command/help.rb
-- lib/stamina/command/abbadingo_dfa.rb
-- lib/stamina/command/metrics.rb
-- lib/stamina/command/abbadingo_samples.rb
-- lib/stamina/command/classify.rb
-- lib/stamina/command/robustness.rb
-- lib/stamina/command/adl2dot.rb
-- lib/stamina/errors.rb
-- lib/stamina/induction/commons.rb
-- lib/stamina/induction/rpni.rb
-- lib/stamina/induction/union_find.rb
-- lib/stamina/induction/blue_fringe.rb
-- lib/stamina/input_string.rb
-- lib/stamina/markable.rb
-- lib/stamina/sample.rb
-- lib/stamina/version.rb
-- lib/stamina/loader.rb
-- lib/stamina/scoring.rb
-- lib/stamina/utils/decorate.rb
-- lib/stamina/utils.rb
-- lib/stamina/abbadingo.rb
-- lib/stamina/abbadingo/random_dfa.rb
-- lib/stamina/abbadingo/random_sample.rb
-- lib/stamina/command.rb
-- lib/stamina/ext/math.rb
-- tasks/yard.rake
-- tasks/debug_mail.txt
-- tasks/gem.rake
-- tasks/unit_test.rake
-- tasks/debug_mail.rake
-- tasks/spec_test.rake
-- test/stamina/adl_test.rb
-- test/stamina/automaton_additional_test.rb
-- test/stamina/automaton_test.rb
-- test/stamina/scoring_test.rb
-- test/stamina/abbadingo/random_dfa_test.rb
-- test/stamina/abbadingo/random_sample_test.rb
-- test/stamina/exit.rb
-- test/stamina/induction/induction_test.rb
-- test/stamina/induction/redblue_mergesamestatebug_expected.adl
-- test/stamina/induction/redblue_mergesamestatebug_pta.dot
-- test/stamina/induction/redblue_mergesamestatebug_sample.adl
-- test/stamina/induction/rpni_test.rb
-- test/stamina/induction/redblue_universal_expected.adl
-- test/stamina/induction/redblue_universal_sample.adl
-- test/stamina/induction/rpni_inria_expected.adl
-- test/stamina/induction/rpni_inria_sample.adl
-- test/stamina/induction/rpni_test_pta.dot
-- test/stamina/induction/rpni_universal_expected.adl
-- test/stamina/induction/rpni_universal_sample.adl
-- test/stamina/induction/union_find_test.rb
-- test/stamina/induction/blue_fringe_test.rb
-- test/stamina/input_string_test.rb
-- test/stamina/markable_test.rb
-- test/stamina/randdfa.adl
-- test/stamina/sample.adl
-- test/stamina/sample_classify_test.rb
-- test/stamina/sample_test.rb
-- test/stamina/small_dfa.dot
-- test/stamina/small_dfa.gif
-- test/stamina/small_nfa.dot
-- test/stamina/small_nfa.gif
-- test/stamina/stamina_test.rb
-- test/stamina/utils/decorate_test.rb
-- test/stamina/automaton/classifier_test.rb
-- test/stamina/automaton/walking_test.rb
-- test/stamina/automaton/to_dot_test.rb
-- test/stamina/automaton/metrics_test.rb
-- test/stamina/automaton/walking/dfa_delta_test.rb
-- test/stamina/automaton/equivalence_test.rb
-- test/stamina/automaton/strip_test.rb
-- test/stamina/automaton/complete_test.rb
-- test/stamina/automaton/minimize/minimize_test.rb
-- test/stamina/automaton/minimize/rice_edu_13.adl
-- test/stamina/automaton/minimize/rice_edu_13.min.adl
-- test/stamina/automaton/minimize/rice_edu_10.adl
-- test/stamina/automaton/minimize/rice_edu_10.min.adl
-- test/stamina/automaton/minimize/pitchies_test.rb
-- test/stamina/automaton/minimize/unknown_1.adl
-- test/stamina/automaton/minimize/unknown_1.min.adl
-- test/stamina/automaton/minimize/hopcroft_test.rb
-- test/stamina/automaton/minimize/should_strip_1.adl
-- test/stamina/automaton/minimize/should_strip_1.min.adl
-- test/test_all.rb
-- .gemtest
-- CHANGELOG.md
-- Gemfile
-- Gemfile.lock
-- LICENCE.md
-- Manifest.txt
-- Rakefile
-- README.md
-- stamina.gemspec
-- stamina.noespec
-has_rdoc: true
-homepage: http://stamina.chefbe.net/
+homepage: https://github.com/blambeau/stamina
 licenses: []
-
 post_install_message: 
 rdoc_options: []
-
-require_paths: 
+require_paths:
 - lib
-required_ruby_version: !ruby/object:Gem::Requirement 
+required_ruby_version: !ruby/object:Gem::Requirement
   none: false
-  requirements: 
-  - - ">="
-    - !ruby/object:Gem::Version 
-      hash: 3
-      segments: 
-      - 0
-      version: "0"
-required_rubygems_version: !ruby/object:Gem::Requirement 
+  requirements:
+  - - ! '>='
+    - !ruby/object:Gem::Version
+      version: '0'
+required_rubygems_version: !ruby/object:Gem::Requirement
   none: false
-  requirements: 
-  - - ">="
-    - !ruby/object:Gem::Version 
-      hash: 3
-      segments: 
-      - 0
-      version: "0"
+  requirements:
+  - - ! '>='
+    - !ruby/object:Gem::Version
+      version: '0'
 requirements: []
-
 rubyforge_project: 
-rubygems_version: 1.6.2
+rubygems_version: 1.8.10
 signing_key: 
 specification_version: 3
 summary: Automaton and Regular Inference Toolkit
-test_files: 
-- test/stamina/adl_test.rb
-- test/stamina/automaton_additional_test.rb
-- test/stamina/automaton_test.rb
-- test/stamina/scoring_test.rb
-- test/stamina/abbadingo/random_dfa_test.rb
-- test/stamina/abbadingo/random_sample_test.rb
-- test/stamina/exit.rb
-- test/stamina/induction/induction_test.rb
-- test/stamina/induction/redblue_mergesamestatebug_expected.adl
-- test/stamina/induction/redblue_mergesamestatebug_pta.dot
-- test/stamina/induction/redblue_mergesamestatebug_sample.adl
-- test/stamina/induction/rpni_test.rb
-- test/stamina/induction/redblue_universal_expected.adl
-- test/stamina/induction/redblue_universal_sample.adl
-- test/stamina/induction/rpni_inria_expected.adl
-- test/stamina/induction/rpni_inria_sample.adl
-- test/stamina/induction/rpni_test_pta.dot
-- test/stamina/induction/rpni_universal_expected.adl
-- test/stamina/induction/rpni_universal_sample.adl
-- test/stamina/induction/union_find_test.rb
-- test/stamina/induction/blue_fringe_test.rb
-- test/stamina/input_string_test.rb
-- test/stamina/markable_test.rb
-- test/stamina/randdfa.adl
-- test/stamina/sample.adl
-- test/stamina/sample_classify_test.rb
-- test/stamina/sample_test.rb
-- test/stamina/small_dfa.dot
-- test/stamina/small_dfa.gif
-- test/stamina/small_nfa.dot
-- test/stamina/small_nfa.gif
-- test/stamina/stamina_test.rb
-- test/stamina/utils/decorate_test.rb
-- test/stamina/automaton/classifier_test.rb
-- test/stamina/automaton/walking_test.rb
-- test/stamina/automaton/to_dot_test.rb
-- test/stamina/automaton/metrics_test.rb
-- test/stamina/automaton/walking/dfa_delta_test.rb
-- test/stamina/automaton/equivalence_test.rb
-- test/stamina/automaton/strip_test.rb
-- test/stamina/automaton/complete_test.rb
-- test/stamina/automaton/minimize/minimize_test.rb
-- test/stamina/automaton/minimize/rice_edu_13.adl
-- test/stamina/automaton/minimize/rice_edu_13.min.adl
-- test/stamina/automaton/minimize/rice_edu_10.adl
-- test/stamina/automaton/minimize/rice_edu_10.min.adl
-- test/stamina/automaton/minimize/pitchies_test.rb
-- test/stamina/automaton/minimize/unknown_1.adl
-- test/stamina/automaton/minimize/unknown_1.min.adl
-- test/stamina/automaton/minimize/hopcroft_test.rb
-- test/stamina/automaton/minimize/should_strip_1.adl
-- test/stamina/automaton/minimize/should_strip_1.min.adl
-- test/test_all.rb
+test_files: []
+has_rdoc: