silicium 0.0.2 → 0.0.21
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- checksums.yaml +4 -4
- data/.codeclimate.yml +3 -3
- data/.gitignore +13 -13
- data/.rakeTasks +8 -0
- data/.travis.yml +28 -25
- data/CODE_OF_CONDUCT.md +74 -74
- data/Gemfile +8 -8
- data/LICENSE.txt +21 -21
- data/Makefile +269 -269
- data/README.md +588 -46
- data/Rakefile +16 -16
- data/bin/console +14 -14
- data/bin/setup +8 -8
- data/docs/Object.html +117 -117
- data/docs/README_md.html +142 -142
- data/docs/Silicium/Combinatorics.html +270 -270
- data/docs/Silicium/Dice/Polyhedron.html +315 -315
- data/docs/Silicium/Dice/PolyhedronSet.html +321 -321
- data/docs/Silicium/Dice.html +99 -99
- data/docs/Silicium/Error.html +106 -106
- data/docs/Silicium/Geometry/Line2dCanon.html +243 -243
- data/docs/Silicium/Geometry/VariablesOrderException.html +106 -106
- data/docs/Silicium/Geometry.html +940 -940
- data/docs/Silicium/GraphVisualizer.html +226 -0
- data/docs/Silicium/Graphs/GraphError.html +106 -106
- data/docs/Silicium/Graphs/OrientedGraph.html +901 -775
- data/docs/Silicium/Graphs/UnorientedGraph.html +237 -284
- data/docs/Silicium/Graphs.html +374 -164
- data/docs/Silicium/IntegralDoesntExistError.html +106 -106
- data/docs/Silicium/NumericalIntegration.html +521 -521
- data/docs/Silicium/Optimization.html +629 -639
- data/docs/Silicium/Plotter/Image.html +297 -297
- data/docs/Silicium/Plotter.html +186 -186
- data/docs/Silicium.html +101 -101
- data/docs/created.rid +9 -9
- data/docs/css/fonts.css +167 -167
- data/docs/css/rdoc.css +619 -619
- data/docs/index.html +134 -132
- data/docs/js/darkfish.js +84 -84
- data/docs/js/navigation.js +105 -105
- data/docs/js/search.js +110 -110
- data/docs/js/search_index.js +1 -1
- data/docs/js/search_index.js.gz +0 -0
- data/docs/js/searcher.js +229 -229
- data/docs/table_of_contents.html +697 -608
- data/lib/algebra.rb +452 -0
- data/lib/algebra_diff.rb +258 -0
- data/lib/geometry/figure.rb +62 -0
- data/lib/geometry.rb +290 -236
- data/lib/geometry3d.rb +270 -0
- data/lib/graph/dfs.rb +42 -0
- data/lib/graph/kruskal.rb +36 -0
- data/lib/graph/scc.rb +97 -0
- data/lib/graph.rb +350 -164
- data/lib/graph_visualizer.rb +287 -0
- data/lib/ml_algorithms.rb +181 -0
- data/lib/numerical_integration.rb +184 -147
- data/lib/optimization.rb +209 -144
- data/lib/plotter.rb +256 -96
- data/lib/polynomial_division.rb +132 -0
- data/lib/polynomial_interpolation.rb +94 -0
- data/lib/regression.rb +120 -0
- data/lib/silicium/adding.rb +37 -0
- data/lib/silicium/conversions.rb +23 -0
- data/lib/silicium/multi.rb +82 -0
- data/lib/silicium/sparse.rb +76 -0
- data/lib/silicium/sugar.rb +37 -0
- data/lib/silicium/trans.rb +26 -0
- data/lib/silicium/version.rb +3 -3
- data/lib/silicium.rb +5 -5
- data/lib/theory_of_probability.rb +240 -226
- data/lib/topological_sort.rb +50 -0
- data/oriented_graph.png +0 -0
- data/plot.png +0 -0
- data/silicium.gemspec +38 -39
- metadata +38 -16
data/docs/js/search.js
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data/docs/js/search_index.js
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var search_data = 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Searcher.prototype = new function() {
|
7
|
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// search is performed in chunks of 1000 for non-blocking user input
|
8
|
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var CHUNK_SIZE = 1000;
|
9
|
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// do not try to find more than 100 results
|
10
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var MAX_RESULTS = 100;
|
11
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var huid = 1;
|
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var suid = 1;
|
13
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var runs = 0;
|
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|
15
|
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this.find = function(query) {
|
16
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var queries = splitQuery(query);
|
17
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var regexps = buildRegexps(queries);
|
18
|
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var highlighters = buildHilighters(queries);
|
19
|
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var state = { from: 0, pass: 0, limit: MAX_RESULTS, n: suid++};
|
20
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var _this = this;
|
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|
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this.currentSuid = state.n;
|
23
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-
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if (!query) return;
|
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|
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var run = function() {
|
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// stop current search thread if new search started
|
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if (state.n != _this.currentSuid) return;
|
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|
30
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var results =
|
31
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performSearch(_this.data, regexps, queries, highlighters, state);
|
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var hasMore = (state.limit > 0 && state.pass < 4);
|
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|
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triggerResults.call(_this, results, !hasMore);
|
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if (hasMore) {
|
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setTimeout(run, 2);
|
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}
|
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runs++;
|
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};
|
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runs = 0;
|
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|
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|
42
|
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// start search thread
|
43
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run();
|
44
|
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}
|
45
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|
46
|
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/* ----- Events ------ */
|
47
|
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this.ready = function(fn) {
|
48
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fn.huid = huid;
|
49
|
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this.handlers.push(fn);
|
50
|
-
}
|
51
|
-
|
52
|
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/* ----- Utilities ------ */
|
53
|
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function splitQuery(query) {
|
54
|
-
return query.split(/(\s+|::?|\(\)?)/).filter(function(string) {
|
55
|
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return string.match(/\S/);
|
56
|
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});
|
57
|
-
}
|
58
|
-
|
59
|
-
function buildRegexps(queries) {
|
60
|
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return queries.map(function(query) {
|
61
|
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return new RegExp(query.replace(/(.)/g, '([$1])([^$1]*?)'), 'i');
|
62
|
-
});
|
63
|
-
}
|
64
|
-
|
65
|
-
function buildHilighters(queries) {
|
66
|
-
return queries.map(function(query) {
|
67
|
-
return query.split('').map(function(l, i) {
|
68
|
-
return '\u0001$' + (i*2+1) + '\u0002$' + (i*2+2);
|
69
|
-
}).join('');
|
70
|
-
});
|
71
|
-
}
|
72
|
-
|
73
|
-
// function longMatchRegexp(index, longIndex, regexps) {
|
74
|
-
// for (var i = regexps.length - 1; i >= 0; i--){
|
75
|
-
// if (!index.match(regexps[i]) && !longIndex.match(regexps[i])) return false;
|
76
|
-
// };
|
77
|
-
// return true;
|
78
|
-
// }
|
79
|
-
|
80
|
-
|
81
|
-
/* ----- Mathchers ------ */
|
82
|
-
|
83
|
-
/*
|
84
|
-
* This record matches if the index starts with queries[0] and the record
|
85
|
-
* matches all of the regexps
|
86
|
-
*/
|
87
|
-
function matchPassBeginning(index, longIndex, queries, regexps) {
|
88
|
-
if (index.indexOf(queries[0]) != 0) return false;
|
89
|
-
for (var i=1, l = regexps.length; i < l; i++) {
|
90
|
-
if (!index.match(regexps[i]) && !longIndex.match(regexps[i]))
|
91
|
-
return false;
|
92
|
-
};
|
93
|
-
return true;
|
94
|
-
}
|
95
|
-
|
96
|
-
/*
|
97
|
-
* This record matches if the longIndex starts with queries[0] and the
|
98
|
-
* longIndex matches all of the regexps
|
99
|
-
*/
|
100
|
-
function matchPassLongIndex(index, longIndex, queries, regexps) {
|
101
|
-
if (longIndex.indexOf(queries[0]) != 0) return false;
|
102
|
-
for (var i=1, l = regexps.length; i < l; i++) {
|
103
|
-
if (!longIndex.match(regexps[i]))
|
104
|
-
return false;
|
105
|
-
};
|
106
|
-
return true;
|
107
|
-
}
|
108
|
-
|
109
|
-
/*
|
110
|
-
* This record matches if the index contains queries[0] and the record
|
111
|
-
* matches all of the regexps
|
112
|
-
*/
|
113
|
-
function matchPassContains(index, longIndex, queries, regexps) {
|
114
|
-
if (index.indexOf(queries[0]) == -1) return false;
|
115
|
-
for (var i=1, l = regexps.length; i < l; i++) {
|
116
|
-
if (!index.match(regexps[i]) && !longIndex.match(regexps[i]))
|
117
|
-
return false;
|
118
|
-
};
|
119
|
-
return true;
|
120
|
-
}
|
121
|
-
|
122
|
-
/*
|
123
|
-
* This record matches if regexps[0] matches the index and the record
|
124
|
-
* matches all of the regexps
|
125
|
-
*/
|
126
|
-
function matchPassRegexp(index, longIndex, queries, regexps) {
|
127
|
-
if (!index.match(regexps[0])) return false;
|
128
|
-
for (var i=1, l = regexps.length; i < l; i++) {
|
129
|
-
if (!index.match(regexps[i]) && !longIndex.match(regexps[i]))
|
130
|
-
return false;
|
131
|
-
};
|
132
|
-
return true;
|
133
|
-
}
|
134
|
-
|
135
|
-
|
136
|
-
/* ----- Highlighters ------ */
|
137
|
-
function highlightRegexp(info, queries, regexps, highlighters) {
|
138
|
-
var result = createResult(info);
|
139
|
-
for (var i=0, l = regexps.length; i < l; i++) {
|
140
|
-
result.title = result.title.replace(regexps[i], highlighters[i]);
|
141
|
-
result.namespace = result.namespace.replace(regexps[i], highlighters[i]);
|
142
|
-
};
|
143
|
-
return result;
|
144
|
-
}
|
145
|
-
|
146
|
-
function hltSubstring(string, pos, length) {
|
147
|
-
return string.substring(0, pos) + '\u0001' + string.substring(pos, pos + length) + '\u0002' + string.substring(pos + length);
|
148
|
-
}
|
149
|
-
|
150
|
-
function highlightQuery(info, queries, regexps, highlighters) {
|
151
|
-
var result = createResult(info);
|
152
|
-
var pos = 0;
|
153
|
-
var lcTitle = result.title.toLowerCase();
|
154
|
-
|
155
|
-
pos = lcTitle.indexOf(queries[0]);
|
156
|
-
if (pos != -1) {
|
157
|
-
result.title = hltSubstring(result.title, pos, queries[0].length);
|
158
|
-
}
|
159
|
-
|
160
|
-
result.namespace = result.namespace.replace(regexps[0], highlighters[0]);
|
161
|
-
for (var i=1, l = regexps.length; i < l; i++) {
|
162
|
-
result.title = result.title.replace(regexps[i], highlighters[i]);
|
163
|
-
result.namespace = result.namespace.replace(regexps[i], highlighters[i]);
|
164
|
-
};
|
165
|
-
return result;
|
166
|
-
}
|
167
|
-
|
168
|
-
function createResult(info) {
|
169
|
-
var result = {};
|
170
|
-
result.title = info[0];
|
171
|
-
result.namespace = info[1];
|
172
|
-
result.path = info[2];
|
173
|
-
result.params = info[3];
|
174
|
-
result.snippet = info[4];
|
175
|
-
result.badge = info[6];
|
176
|
-
return result;
|
177
|
-
}
|
178
|
-
|
179
|
-
/* ----- Searching ------ */
|
180
|
-
function performSearch(data, regexps, queries, highlighters, state) {
|
181
|
-
var searchIndex = data.searchIndex;
|
182
|
-
var longSearchIndex = data.longSearchIndex;
|
183
|
-
var info = data.info;
|
184
|
-
var result = [];
|
185
|
-
var i = state.from;
|
186
|
-
var l = searchIndex.length;
|
187
|
-
var togo = CHUNK_SIZE;
|
188
|
-
var matchFunc, hltFunc;
|
189
|
-
|
190
|
-
while (state.pass < 4 && state.limit > 0 && togo > 0) {
|
191
|
-
if (state.pass == 0) {
|
192
|
-
matchFunc = matchPassBeginning;
|
193
|
-
hltFunc = highlightQuery;
|
194
|
-
} else if (state.pass == 1) {
|
195
|
-
matchFunc = matchPassLongIndex;
|
196
|
-
hltFunc = highlightQuery;
|
197
|
-
} else if (state.pass == 2) {
|
198
|
-
matchFunc = matchPassContains;
|
199
|
-
hltFunc = highlightQuery;
|
200
|
-
} else if (state.pass == 3) {
|
201
|
-
matchFunc = matchPassRegexp;
|
202
|
-
hltFunc = highlightRegexp;
|
203
|
-
}
|
204
|
-
|
205
|
-
for (; togo > 0 && i < l && state.limit > 0; i++, togo--) {
|
206
|
-
if (info[i].n == state.n) continue;
|
207
|
-
if (matchFunc(searchIndex[i], longSearchIndex[i], queries, regexps)) {
|
208
|
-
info[i].n = state.n;
|
209
|
-
result.push(hltFunc(info[i], queries, regexps, highlighters));
|
210
|
-
state.limit--;
|
211
|
-
}
|
212
|
-
};
|
213
|
-
if (searchIndex.length <= i) {
|
214
|
-
state.pass++;
|
215
|
-
i = state.from = 0;
|
216
|
-
} else {
|
217
|
-
state.from = i;
|
218
|
-
}
|
219
|
-
}
|
220
|
-
return result;
|
221
|
-
}
|
222
|
-
|
223
|
-
function triggerResults(results, isLast) {
|
224
|
-
this.handlers.forEach(function(fn) {
|
225
|
-
fn.call(this, results, isLast)
|
226
|
-
});
|
227
|
-
}
|
228
|
-
}
|
229
|
-
|
1
|
+
Searcher = function(data) {
|
2
|
+
this.data = data;
|
3
|
+
this.handlers = [];
|
4
|
+
}
|
5
|
+
|
6
|
+
Searcher.prototype = new function() {
|
7
|
+
// search is performed in chunks of 1000 for non-blocking user input
|
8
|
+
var CHUNK_SIZE = 1000;
|
9
|
+
// do not try to find more than 100 results
|
10
|
+
var MAX_RESULTS = 100;
|
11
|
+
var huid = 1;
|
12
|
+
var suid = 1;
|
13
|
+
var runs = 0;
|
14
|
+
|
15
|
+
this.find = function(query) {
|
16
|
+
var queries = splitQuery(query);
|
17
|
+
var regexps = buildRegexps(queries);
|
18
|
+
var highlighters = buildHilighters(queries);
|
19
|
+
var state = { from: 0, pass: 0, limit: MAX_RESULTS, n: suid++};
|
20
|
+
var _this = this;
|
21
|
+
|
22
|
+
this.currentSuid = state.n;
|
23
|
+
|
24
|
+
if (!query) return;
|
25
|
+
|
26
|
+
var run = function() {
|
27
|
+
// stop current search thread if new search started
|
28
|
+
if (state.n != _this.currentSuid) return;
|
29
|
+
|
30
|
+
var results =
|
31
|
+
performSearch(_this.data, regexps, queries, highlighters, state);
|
32
|
+
var hasMore = (state.limit > 0 && state.pass < 4);
|
33
|
+
|
34
|
+
triggerResults.call(_this, results, !hasMore);
|
35
|
+
if (hasMore) {
|
36
|
+
setTimeout(run, 2);
|
37
|
+
}
|
38
|
+
runs++;
|
39
|
+
};
|
40
|
+
runs = 0;
|
41
|
+
|
42
|
+
// start search thread
|
43
|
+
run();
|
44
|
+
}
|
45
|
+
|
46
|
+
/* ----- Events ------ */
|
47
|
+
this.ready = function(fn) {
|
48
|
+
fn.huid = huid;
|
49
|
+
this.handlers.push(fn);
|
50
|
+
}
|
51
|
+
|
52
|
+
/* ----- Utilities ------ */
|
53
|
+
function splitQuery(query) {
|
54
|
+
return query.split(/(\s+|::?|\(\)?)/).filter(function(string) {
|
55
|
+
return string.match(/\S/);
|
56
|
+
});
|
57
|
+
}
|
58
|
+
|
59
|
+
function buildRegexps(queries) {
|
60
|
+
return queries.map(function(query) {
|
61
|
+
return new RegExp(query.replace(/(.)/g, '([$1])([^$1]*?)'), 'i');
|
62
|
+
});
|
63
|
+
}
|
64
|
+
|
65
|
+
function buildHilighters(queries) {
|
66
|
+
return queries.map(function(query) {
|
67
|
+
return query.split('').map(function(l, i) {
|
68
|
+
return '\u0001$' + (i*2+1) + '\u0002$' + (i*2+2);
|
69
|
+
}).join('');
|
70
|
+
});
|
71
|
+
}
|
72
|
+
|
73
|
+
// function longMatchRegexp(index, longIndex, regexps) {
|
74
|
+
// for (var i = regexps.length - 1; i >= 0; i--){
|
75
|
+
// if (!index.match(regexps[i]) && !longIndex.match(regexps[i])) return false;
|
76
|
+
// };
|
77
|
+
// return true;
|
78
|
+
// }
|
79
|
+
|
80
|
+
|
81
|
+
/* ----- Mathchers ------ */
|
82
|
+
|
83
|
+
/*
|
84
|
+
* This record matches if the index starts with queries[0] and the record
|
85
|
+
* matches all of the regexps
|
86
|
+
*/
|
87
|
+
function matchPassBeginning(index, longIndex, queries, regexps) {
|
88
|
+
if (index.indexOf(queries[0]) != 0) return false;
|
89
|
+
for (var i=1, l = regexps.length; i < l; i++) {
|
90
|
+
if (!index.match(regexps[i]) && !longIndex.match(regexps[i]))
|
91
|
+
return false;
|
92
|
+
};
|
93
|
+
return true;
|
94
|
+
}
|
95
|
+
|
96
|
+
/*
|
97
|
+
* This record matches if the longIndex starts with queries[0] and the
|
98
|
+
* longIndex matches all of the regexps
|
99
|
+
*/
|
100
|
+
function matchPassLongIndex(index, longIndex, queries, regexps) {
|
101
|
+
if (longIndex.indexOf(queries[0]) != 0) return false;
|
102
|
+
for (var i=1, l = regexps.length; i < l; i++) {
|
103
|
+
if (!longIndex.match(regexps[i]))
|
104
|
+
return false;
|
105
|
+
};
|
106
|
+
return true;
|
107
|
+
}
|
108
|
+
|
109
|
+
/*
|
110
|
+
* This record matches if the index contains queries[0] and the record
|
111
|
+
* matches all of the regexps
|
112
|
+
*/
|
113
|
+
function matchPassContains(index, longIndex, queries, regexps) {
|
114
|
+
if (index.indexOf(queries[0]) == -1) return false;
|
115
|
+
for (var i=1, l = regexps.length; i < l; i++) {
|
116
|
+
if (!index.match(regexps[i]) && !longIndex.match(regexps[i]))
|
117
|
+
return false;
|
118
|
+
};
|
119
|
+
return true;
|
120
|
+
}
|
121
|
+
|
122
|
+
/*
|
123
|
+
* This record matches if regexps[0] matches the index and the record
|
124
|
+
* matches all of the regexps
|
125
|
+
*/
|
126
|
+
function matchPassRegexp(index, longIndex, queries, regexps) {
|
127
|
+
if (!index.match(regexps[0])) return false;
|
128
|
+
for (var i=1, l = regexps.length; i < l; i++) {
|
129
|
+
if (!index.match(regexps[i]) && !longIndex.match(regexps[i]))
|
130
|
+
return false;
|
131
|
+
};
|
132
|
+
return true;
|
133
|
+
}
|
134
|
+
|
135
|
+
|
136
|
+
/* ----- Highlighters ------ */
|
137
|
+
function highlightRegexp(info, queries, regexps, highlighters) {
|
138
|
+
var result = createResult(info);
|
139
|
+
for (var i=0, l = regexps.length; i < l; i++) {
|
140
|
+
result.title = result.title.replace(regexps[i], highlighters[i]);
|
141
|
+
result.namespace = result.namespace.replace(regexps[i], highlighters[i]);
|
142
|
+
};
|
143
|
+
return result;
|
144
|
+
}
|
145
|
+
|
146
|
+
function hltSubstring(string, pos, length) {
|
147
|
+
return string.substring(0, pos) + '\u0001' + string.substring(pos, pos + length) + '\u0002' + string.substring(pos + length);
|
148
|
+
}
|
149
|
+
|
150
|
+
function highlightQuery(info, queries, regexps, highlighters) {
|
151
|
+
var result = createResult(info);
|
152
|
+
var pos = 0;
|
153
|
+
var lcTitle = result.title.toLowerCase();
|
154
|
+
|
155
|
+
pos = lcTitle.indexOf(queries[0]);
|
156
|
+
if (pos != -1) {
|
157
|
+
result.title = hltSubstring(result.title, pos, queries[0].length);
|
158
|
+
}
|
159
|
+
|
160
|
+
result.namespace = result.namespace.replace(regexps[0], highlighters[0]);
|
161
|
+
for (var i=1, l = regexps.length; i < l; i++) {
|
162
|
+
result.title = result.title.replace(regexps[i], highlighters[i]);
|
163
|
+
result.namespace = result.namespace.replace(regexps[i], highlighters[i]);
|
164
|
+
};
|
165
|
+
return result;
|
166
|
+
}
|
167
|
+
|
168
|
+
function createResult(info) {
|
169
|
+
var result = {};
|
170
|
+
result.title = info[0];
|
171
|
+
result.namespace = info[1];
|
172
|
+
result.path = info[2];
|
173
|
+
result.params = info[3];
|
174
|
+
result.snippet = info[4];
|
175
|
+
result.badge = info[6];
|
176
|
+
return result;
|
177
|
+
}
|
178
|
+
|
179
|
+
/* ----- Searching ------ */
|
180
|
+
function performSearch(data, regexps, queries, highlighters, state) {
|
181
|
+
var searchIndex = data.searchIndex;
|
182
|
+
var longSearchIndex = data.longSearchIndex;
|
183
|
+
var info = data.info;
|
184
|
+
var result = [];
|
185
|
+
var i = state.from;
|
186
|
+
var l = searchIndex.length;
|
187
|
+
var togo = CHUNK_SIZE;
|
188
|
+
var matchFunc, hltFunc;
|
189
|
+
|
190
|
+
while (state.pass < 4 && state.limit > 0 && togo > 0) {
|
191
|
+
if (state.pass == 0) {
|
192
|
+
matchFunc = matchPassBeginning;
|
193
|
+
hltFunc = highlightQuery;
|
194
|
+
} else if (state.pass == 1) {
|
195
|
+
matchFunc = matchPassLongIndex;
|
196
|
+
hltFunc = highlightQuery;
|
197
|
+
} else if (state.pass == 2) {
|
198
|
+
matchFunc = matchPassContains;
|
199
|
+
hltFunc = highlightQuery;
|
200
|
+
} else if (state.pass == 3) {
|
201
|
+
matchFunc = matchPassRegexp;
|
202
|
+
hltFunc = highlightRegexp;
|
203
|
+
}
|
204
|
+
|
205
|
+
for (; togo > 0 && i < l && state.limit > 0; i++, togo--) {
|
206
|
+
if (info[i].n == state.n) continue;
|
207
|
+
if (matchFunc(searchIndex[i], longSearchIndex[i], queries, regexps)) {
|
208
|
+
info[i].n = state.n;
|
209
|
+
result.push(hltFunc(info[i], queries, regexps, highlighters));
|
210
|
+
state.limit--;
|
211
|
+
}
|
212
|
+
};
|
213
|
+
if (searchIndex.length <= i) {
|
214
|
+
state.pass++;
|
215
|
+
i = state.from = 0;
|
216
|
+
} else {
|
217
|
+
state.from = i;
|
218
|
+
}
|
219
|
+
}
|
220
|
+
return result;
|
221
|
+
}
|
222
|
+
|
223
|
+
function triggerResults(results, isLast) {
|
224
|
+
this.handlers.forEach(function(fn) {
|
225
|
+
fn.call(this, results, isLast)
|
226
|
+
});
|
227
|
+
}
|
228
|
+
}
|
229
|
+
|