silicium 0.0.2 → 0.0.21
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/.codeclimate.yml +3 -3
- data/.gitignore +13 -13
- data/.rakeTasks +8 -0
- data/.travis.yml +28 -25
- data/CODE_OF_CONDUCT.md +74 -74
- data/Gemfile +8 -8
- data/LICENSE.txt +21 -21
- data/Makefile +269 -269
- data/README.md +588 -46
- data/Rakefile +16 -16
- data/bin/console +14 -14
- data/bin/setup +8 -8
- data/docs/Object.html +117 -117
- data/docs/README_md.html +142 -142
- data/docs/Silicium/Combinatorics.html +270 -270
- data/docs/Silicium/Dice/Polyhedron.html +315 -315
- data/docs/Silicium/Dice/PolyhedronSet.html +321 -321
- data/docs/Silicium/Dice.html +99 -99
- data/docs/Silicium/Error.html +106 -106
- data/docs/Silicium/Geometry/Line2dCanon.html +243 -243
- data/docs/Silicium/Geometry/VariablesOrderException.html +106 -106
- data/docs/Silicium/Geometry.html +940 -940
- data/docs/Silicium/GraphVisualizer.html +226 -0
- data/docs/Silicium/Graphs/GraphError.html +106 -106
- data/docs/Silicium/Graphs/OrientedGraph.html +901 -775
- data/docs/Silicium/Graphs/UnorientedGraph.html +237 -284
- data/docs/Silicium/Graphs.html +374 -164
- data/docs/Silicium/IntegralDoesntExistError.html +106 -106
- data/docs/Silicium/NumericalIntegration.html +521 -521
- data/docs/Silicium/Optimization.html +629 -639
- data/docs/Silicium/Plotter/Image.html +297 -297
- data/docs/Silicium/Plotter.html +186 -186
- data/docs/Silicium.html +101 -101
- data/docs/created.rid +9 -9
- data/docs/css/fonts.css +167 -167
- data/docs/css/rdoc.css +619 -619
- data/docs/index.html +134 -132
- data/docs/js/darkfish.js +84 -84
- data/docs/js/navigation.js +105 -105
- data/docs/js/search.js +110 -110
- data/docs/js/search_index.js +1 -1
- data/docs/js/search_index.js.gz +0 -0
- data/docs/js/searcher.js +229 -229
- data/docs/table_of_contents.html +697 -608
- data/lib/algebra.rb +452 -0
- data/lib/algebra_diff.rb +258 -0
- data/lib/geometry/figure.rb +62 -0
- data/lib/geometry.rb +290 -236
- data/lib/geometry3d.rb +270 -0
- data/lib/graph/dfs.rb +42 -0
- data/lib/graph/kruskal.rb +36 -0
- data/lib/graph/scc.rb +97 -0
- data/lib/graph.rb +350 -164
- data/lib/graph_visualizer.rb +287 -0
- data/lib/ml_algorithms.rb +181 -0
- data/lib/numerical_integration.rb +184 -147
- data/lib/optimization.rb +209 -144
- data/lib/plotter.rb +256 -96
- data/lib/polynomial_division.rb +132 -0
- data/lib/polynomial_interpolation.rb +94 -0
- data/lib/regression.rb +120 -0
- data/lib/silicium/adding.rb +37 -0
- data/lib/silicium/conversions.rb +23 -0
- data/lib/silicium/multi.rb +82 -0
- data/lib/silicium/sparse.rb +76 -0
- data/lib/silicium/sugar.rb +37 -0
- data/lib/silicium/trans.rb +26 -0
- data/lib/silicium/version.rb +3 -3
- data/lib/silicium.rb +5 -5
- data/lib/theory_of_probability.rb +240 -226
- data/lib/topological_sort.rb +50 -0
- data/oriented_graph.png +0 -0
- data/plot.png +0 -0
- data/silicium.gemspec +38 -39
- metadata +38 -16
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module Silicium::Optimization
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<span class="ruby-identifier">step</span>.<span class="ruby-identifier">each</span> { <span class="ruby-operator">|</span><span class="ruby-identifier">a</span><span class="ruby-operator">|</span> <span class="ruby-identifier">acc</span> <span class="ruby-operator">+=</span> <span class="ruby-identifier">a</span> <span class="ruby-operator">*</span> <span class="ruby-identifier">a</span> }
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<pre><span class="ruby-comment"># File lib/optimization.rb, line 56</span>
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<span class="ruby-keyword">def</span> <span class="ruby-identifier ruby-title">accuracy</span>(<span class="ruby-identifier">step</span>)
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<span class="ruby-constant">Math</span>.<span class="ruby-identifier">sqrt</span>(<span class="ruby-identifier">acc</span>)
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<span class="ruby-keyword">end</span></pre>
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<p>fastest(but it is not exactly) sort</p>
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<pre><span class="ruby-comment"># File lib/optimization.rb, line 48</span>
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<span class="ruby-keyword">def</span> <span class="ruby-identifier ruby-title">bogosort</span>(<span class="ruby-identifier">a</span>)
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<span class="ruby-identifier">raise</span> <span class="ruby-constant">ArgumentError</span>, <span class="ruby-string">"Nil array in bogosort"</span> <span class="ruby-keyword">if</span> <span class="ruby-identifier">a</span>.<span class="ruby-identifier">nil?</span>
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<span class="ruby-identifier">crutch</span> = <span class="ruby-identifier">a</span>
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<p>fastest(but it is not exactly) sort, modify sequance</p>
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<pre><span class="ruby-comment"># File lib/optimization.rb, line 41</span>
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<span class="ruby-keyword">def</span> <span class="ruby-identifier ruby-title">bogosort!</span>(<span class="ruby-identifier">a</span>)
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<span class="ruby-identifier">a</span>.<span class="ruby-identifier">shuffle!</span> <span class="ruby-keyword">until</span> <span class="ruby-identifier">sorted?</span>(<span class="ruby-identifier">a</span>)
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<p>find root in [a, b], if he exist, if number of iterations > iters -> error</p>
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<pre><span class="ruby-comment"># File lib/optimization.rb, line 118</span>
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<span class="ruby-keyword">def</span> <span class="ruby-identifier ruby-title">half_division</span>(<span class="ruby-identifier">a</span>, <span class="ruby-identifier">b</span>, <span class="ruby-identifier">eps</span> = <span class="ruby-value">0.001</span>, <span class="ruby-operator">&</span><span class="ruby-identifier">block</span>)
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<span class="ruby-identifier">iters</span> = <span class="ruby-value">1000000</span>
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<span class="ruby-identifier">c</span> = <span class="ruby-identifier">middle</span>(<span class="ruby-identifier">a</span>, <span class="ruby-identifier">b</span>)
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<span class="ruby-keyword">while</span> (<span class="ruby-identifier">block</span>.<span class="ruby-identifier">call</span>(<span class="ruby-identifier">c</span>).<span class="ruby-identifier">abs</span>) <span class="ruby-operator">></span> <span class="ruby-identifier">eps</span>
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<span class="ruby-identifier">tmp</span> = <span class="ruby-identifier">half_division_step</span>(<span class="ruby-identifier">a</span>, <span class="ruby-identifier">b</span>, <span class="ruby-identifier">c</span>, <span class="ruby-operator">&</span><span class="ruby-identifier">block</span>)
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<span class="ruby-identifier">a</span> = <span class="ruby-identifier">tmp</span>[<span class="ruby-value">0</span>]
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<span class="ruby-identifier">b</span> = <span class="ruby-identifier">tmp</span>[<span class="ruby-value">1</span>]
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<span class="ruby-identifier">c</span> = <span class="ruby-identifier">tmp</span>[<span class="ruby-value">2</span>]
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<span class="ruby-identifier">iters</span> <span class="ruby-operator">-=</span> <span class="ruby-value">1</span>
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<span class="ruby-identifier">raise</span> <span class="ruby-constant">RuntimeError</span>, <span class="ruby-string">'Root not found! Check does he exist, or change eps or iters'</span> <span class="ruby-keyword">if</span> <span class="ruby-identifier">iters</span> <span class="ruby-operator">==</span> <span class="ruby-value">0</span>
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<span class="ruby-keyword">end</span>
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<span class="ruby-identifier">c</span>
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<span class="ruby-keyword">end</span></pre>
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<span class="method-name">half_division_step</span><span
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class="method-args">(a, b, c, &block)</span>
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</div>
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<div class="method-description">
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<p>do one half division step</p>
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<pre><span class="ruby-comment"># File lib/optimization.rb, line 106</span>
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<span class="ruby-keyword">def</span> <span class="ruby-identifier ruby-title">half_division_step</span>(<span class="ruby-identifier">a</span>, <span class="ruby-identifier">b</span>, <span class="ruby-identifier">c</span>, <span class="ruby-operator">&</span><span class="ruby-identifier">block</span>)
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<span class="ruby-keyword">if</span> (<span class="ruby-identifier">block</span>.<span class="ruby-identifier">call</span>(<span class="ruby-identifier">a</span>) <span class="ruby-operator">*</span> <span class="ruby-identifier">block</span>.<span class="ruby-identifier">call</span>(<span class="ruby-identifier">c</span>)).<span class="ruby-identifier">negative?</span>
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<span class="ruby-identifier">b</span> = <span class="ruby-identifier">c</span>
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<span class="ruby-keyword">else</span>
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<span class="ruby-identifier">a</span> = <span class="ruby-identifier">c</span>
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<span class="ruby-keyword">end</span>
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[<span class="ruby-identifier">a</span>, <span class="ruby-identifier">b</span>, <span class="ruby-identifier">c</span>]
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<span class="ruby-keyword">end</span></pre>
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<div id="method-i-hook_jeeves" class="method-detail ">
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<span class="method-name">hook_jeeves</span><span
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class="method-args">(x, step, eps = 0.1, &block)</span>
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<p>Hook - Jeeves method for find minimum point (x - array of start variables, step - step of one iteration, eps - allowable error, alfa - slowdown of step, block - function which takes array x, WAENING function doesn't control correctness of input</p>
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<pre><span class="ruby-comment"># File lib/optimization.rb, line 84</span>
|
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<span class="ruby-keyword">def</span> <span class="ruby-identifier ruby-title">hook_jeeves</span>(<span class="ruby-identifier">x</span>, <span class="ruby-identifier">step</span>, <span class="ruby-identifier">eps</span> = <span class="ruby-value">0.1</span>, <span class="ruby-operator">&</span><span class="ruby-identifier">block</span>)
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<span class="ruby-identifier">prev_f</span> = <span class="ruby-identifier">block</span>.<span class="ruby-identifier">call</span>(<span class="ruby-identifier">x</span>)
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<span class="ruby-identifier">acc</span> = <span class="ruby-identifier">accuracy</span>(<span class="ruby-identifier">step</span>)
|
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<span class="ruby-keyword">while</span> (<span class="ruby-identifier">acc</span> <span class="ruby-operator">></span> <span class="ruby-identifier">eps</span>)
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<span class="ruby-keyword">for</span> <span class="ruby-identifier">i</span> <span class="ruby-keyword">in</span> <span class="ruby-value">0</span><span class="ruby-operator">..</span><span class="ruby-identifier">x</span>.<span class="ruby-identifier">length</span> <span class="ruby-operator">-</span> <span class="ruby-value">1</span>
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<span class="ruby-identifier">tmp</span> = <span class="ruby-identifier">hook_jeeves_step</span>(<span class="ruby-identifier">x</span>, <span class="ruby-identifier">i</span>, <span class="ruby-identifier">step</span>, <span class="ruby-operator">&</span><span class="ruby-identifier">block</span>)
|
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<span class="ruby-identifier">cur_f</span> = <span class="ruby-identifier">tmp</span>[<span class="ruby-value">0</span>]
|
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<span class="ruby-identifier">x</span>[<span class="ruby-identifier">i</span>] = <span class="ruby-identifier">tmp</span>[<span class="ruby-value">1</span>]
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<span class="ruby-identifier">step</span>[<span class="ruby-identifier">i</span>] = <span class="ruby-identifier">switch_step</span>(<span class="ruby-identifier">cur_f</span>, <span class="ruby-identifier">prev_f</span>, <span class="ruby-identifier">step</span>, <span class="ruby-identifier">i</span>)
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<span class="ruby-identifier">prev_f</span> = <span class="ruby-identifier">cur_f</span>
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<span class="ruby-keyword">end</span>
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<span class="ruby-identifier">acc</span> = <span class="ruby-identifier">accuracy</span>(<span class="ruby-identifier">step</span>)
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<span class="ruby-keyword">end</span>
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<span class="ruby-identifier">x</span>
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<span class="ruby-keyword">end</span></pre>
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<div id="method-i-hook_jeeves_step" class="method-detail ">
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class="method-args">(x, i, step, &block)</span>
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<span class="method-click-advice">click to toggle source</span>
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</div>
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<p>do one Hook - Jeeves step</p>
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<div class="method-source-code" id="hook_jeeves_step-source">
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<pre><span class="ruby-comment"># File lib/optimization.rb, line 63</span>
|
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<span class="ruby-keyword">def</span> <span class="ruby-identifier ruby-title">hook_jeeves_step</span>(<span class="ruby-identifier">x</span>, <span class="ruby-identifier">i</span>, <span class="ruby-identifier">step</span>, <span class="ruby-operator">&</span><span class="ruby-identifier">block</span>)
|
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<span class="ruby-identifier">x</span>[<span class="ruby-identifier">i</span>] <span class="ruby-operator">+=</span> <span class="ruby-identifier">step</span>[<span class="ruby-identifier">i</span>]
|
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<span class="ruby-identifier">tmp1</span> = <span class="ruby-identifier">block</span>.<span class="ruby-identifier">call</span>(<span class="ruby-identifier">x</span>)
|
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<span class="ruby-identifier">x</span>[<span class="ruby-identifier">i</span>] = <span class="ruby-identifier">x</span>[<span class="ruby-identifier">i</span>] <span class="ruby-operator">-</span> <span class="ruby-value">2</span> <span class="ruby-operator">*</span> <span class="ruby-identifier">step</span>[<span class="ruby-identifier">i</span>]
|
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<span class="ruby-identifier">tmp2</span> = <span class="ruby-identifier">block</span>.<span class="ruby-identifier">call</span>(<span class="ruby-identifier">x</span>)
|
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<span class="ruby-keyword">if</span> (<span class="ruby-identifier">tmp1</span> <span class="ruby-operator">></span> <span class="ruby-identifier">tmp2</span>)
|
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<span class="ruby-identifier">cur_f</span> = <span class="ruby-identifier">tmp2</span>
|
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<span class="ruby-keyword">else</span>
|
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<span class="ruby-identifier">x</span>[<span class="ruby-identifier">i</span>] = <span class="ruby-identifier">x</span>[<span class="ruby-identifier">i</span>] <span class="ruby-operator">+</span> <span class="ruby-identifier">step</span>[<span class="ruby-identifier">i</span>] <span class="ruby-operator">*</span> <span class="ruby-value">2</span>
|
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<span class="ruby-identifier">cur_f</span> = <span class="ruby-identifier">tmp1</span>
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<span class="ruby-keyword">end</span>
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<span class="method-name">integrating_Monte_Carlo_base</span><span
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class="method-args">(a, b, n = 100000, &block)</span>
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<p>integrating using method Monte Carlo (f - function, a, b - integrating limits, n - amount of random numbers)</p>
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<pre><span class="ruby-comment"># File lib/optimization.rb, line 19</span>
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<span class="ruby-keyword">def</span> <span class="ruby-identifier ruby-title">integrating_Monte_Carlo_base</span>(<span class="ruby-identifier">a</span>, <span class="ruby-identifier">b</span>, <span class="ruby-identifier">n</span> = <span class="ruby-value">100000</span>, <span class="ruby-operator">&</span><span class="ruby-identifier">block</span>)
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<span class="ruby-identifier">res</span> = <span class="ruby-value">0</span>
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(<span class="ruby-value">1</span><span class="ruby-operator">..</span>(<span class="ruby-identifier">n</span> <span class="ruby-operator">+</span> <span class="ruby-value">1</span>)).<span class="ruby-identifier">each</span> <span class="ruby-keyword">do</span>
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<span class="ruby-identifier">res</span> <span class="ruby-operator">+=</span> (<span class="ruby-identifier">b</span> <span class="ruby-operator">-</span> <span class="ruby-identifier">a</span>) <span class="ruby-operator">*</span> <span class="ruby-value">1.0</span> <span class="ruby-operator">/</span> <span class="ruby-identifier">n</span> <span class="ruby-operator">*</span> <span class="ruby-identifier">block</span>.<span class="ruby-identifier">call</span>(<span class="ruby-identifier">x</span>)
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<pre><span class="ruby-comment"># File lib/optimization.rb, line 101</span>
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(<span class="ruby-identifier">a</span> <span class="ruby-operator">+</span> <span class="ruby-identifier">b</span>) <span class="ruby-operator">/</span> <span class="ruby-value">2.0</span>
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<pre><span class="ruby-comment"># File lib/optimization.rb, line 9</span>
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<span class="ruby-keyword">def</span> <span class="ruby-identifier ruby-title">re_lu</span>(<span class="ruby-identifier">x</span>)
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<span class="ruby-identifier">x</span>.<span class="ruby-identifier">negative?</span> <span class="ruby-operator">?</span> <span class="ruby-value">0</span> <span class="ruby-operator">:</span> <span class="ruby-identifier">x</span>
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<p>sigmoid function</p>
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<div class="method-source-code" id="sigmoid-source">
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<pre><span class="ruby-comment"># File lib/optimization.rb, line 14</span>
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531
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<span class="ruby-keyword">def</span> <span class="ruby-identifier ruby-title">sigmoid</span>(<span class="ruby-identifier">x</span>)
|
|
532
|
+
<span class="ruby-value">1.0</span> <span class="ruby-operator">/</span> (<span class="ruby-value">1</span> <span class="ruby-operator">+</span> <span class="ruby-constant">Math</span>.<span class="ruby-identifier">exp</span>(<span class="ruby-operator">-</span><span class="ruby-identifier">x</span>))
|
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|
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<span class="ruby-keyword">end</span></pre>
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<div id="method-i-sorted-3F" class="method-detail ">
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<span class="method-name">sorted?</span><span
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<p>return true if array is sorted</p>
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<pre><span class="ruby-comment"># File lib/optimization.rb, line 30</span>
|
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<span class="ruby-keyword">def</span> <span class="ruby-identifier ruby-title">sorted?</span>(<span class="ruby-identifier">a</span>)
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|
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<span class="ruby-keyword">for</span> <span class="ruby-identifier">i</span> <span class="ruby-keyword">in</span> <span class="ruby-value">0</span><span class="ruby-operator">..</span><span class="ruby-identifier">a</span>.<span class="ruby-identifier">length</span> <span class="ruby-operator">-</span> <span class="ruby-value">2</span>
|
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+
<span class="ruby-keyword">if</span> (<span class="ruby-identifier">a</span>[<span class="ruby-identifier">i</span> <span class="ruby-operator">+</span> <span class="ruby-value">1</span>] <span class="ruby-operator"><</span> <span class="ruby-identifier">a</span>[<span class="ruby-identifier">i</span>])
|
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|
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<span class="ruby-keyword">return</span> <span class="ruby-keyword">false</span>
|
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<span class="ruby-keyword">end</span>
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<span class="ruby-keyword">end</span>
|
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<span class="ruby-keyword">true</span>
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<span class="ruby-keyword">end</span></pre>
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<span class="method-name">switch_step</span><span
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class="method-args">(cur_f, prev_f, step, i)</span>
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<p>switch step if current func value > previous func value</p>
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<div class="method-source-code" id="switch_step-source">
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<pre><span class="ruby-comment"># File lib/optimization.rb, line 78</span>
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603
|
+
<span class="ruby-keyword">def</span> <span class="ruby-identifier ruby-title">switch_step</span>(<span class="ruby-identifier">cur_f</span>, <span class="ruby-identifier">prev_f</span>, <span class="ruby-identifier">step</span>, <span class="ruby-identifier">i</span>)
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<span class="ruby-keyword">return</span> <span class="ruby-identifier">step</span>[<span class="ruby-identifier">i</span>] <span class="ruby-operator">/</span> <span class="ruby-value">2.0</span> <span class="ruby-keyword">if</span> <span class="ruby-identifier">cur_f</span> <span class="ruby-operator">>=</span> <span class="ruby-identifier">prev_f</span> <span class="ruby-comment">#you can switch 2.0 on something else</span>
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<span class="ruby-identifier">step</span>[<span class="ruby-identifier">i</span>]
|
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<span class="ruby-keyword">end</span></pre>
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</main>
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<footer id="validator-badges" role="contentinfo">
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<p><a href="https://validator.w3.org/check/referer">Validate</a>
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+
<p>Generated by <a href="https://ruby.github.io/rdoc/">RDoc</a> 6.2.0.
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<p>Based on <a href="http://deveiate.org/projects/Darkfish-RDoc/">Darkfish</a> by <a href="http://deveiate.org">Michael Granger</a>.
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