sigma-rails 1.0.2
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- checksums.yaml +7 -0
- data/LICENSE.txt +22 -0
- data/README.md +37 -0
- data/lib/sigma/rails.rb +8 -0
- data/lib/sigma/rails/version.rb +5 -0
- data/vendor/assets/javascripts/sigma.js +8723 -0
- data/vendor/assets/javascripts/sigma.layout.forceAtlas2/README.md +12 -0
- data/vendor/assets/javascripts/sigma.layout.forceAtlas2/sigma.layout.forceAtlas2.js +1051 -0
- data/vendor/assets/javascripts/sigma.parsers.gexf/README.md +29 -0
- data/vendor/assets/javascripts/sigma.parsers.gexf/gexf-parser.js +548 -0
- data/vendor/assets/javascripts/sigma.parsers.gexf/sigma.parsers.gexf.js +108 -0
- data/vendor/assets/javascripts/sigma.parsers.json/README.md +29 -0
- data/vendor/assets/javascripts/sigma.parsers.json/sigma.parsers.json.js +88 -0
- data/vendor/assets/javascripts/sigma.plugins.animate/README.md +8 -0
- data/vendor/assets/javascripts/sigma.plugins.animate/sigma.plugins.animate.js +165 -0
- data/vendor/assets/javascripts/sigma.plugins.dragNodes/README.md +8 -0
- data/vendor/assets/javascripts/sigma.plugins.dragNodes/sigma.plugins.dragNodes.js +135 -0
- data/vendor/assets/javascripts/sigma.plugins.neighborhoods/README.md +24 -0
- data/vendor/assets/javascripts/sigma.plugins.neighborhoods/sigma.plugins.neighborhoods.js +186 -0
- data/vendor/assets/javascripts/sigma.renderers.customShapes/README.md +55 -0
- data/vendor/assets/javascripts/sigma.renderers.customShapes/shape-library.js +145 -0
- data/vendor/assets/javascripts/sigma.renderers.customShapes/sigma.renderers.customShapes.js +112 -0
- metadata +121 -0
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sigma.parsers.gexf
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==================
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Plugin developed by [Alexis Jacomy](https://github.com/jacomyal), on top of [gexf-parser](https://github.com/Yomguithereal/gexf-parser), developed by [Guillaume Plique](https://github.com/Yomguithereal).
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---
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This plugin provides a single function, `sigma.parsers.gexf()`, that will load a GEXF encoded file, parse it, and instantiate sigma.
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The most basic way to use this helper is to call it with a path and a sigma configuration object. It will then instantiate sigma, but after having added the graph into the config object.
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````javascript
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sigma.parsers.gexf(
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'myGraph.gexf',
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{ container: 'myContainer' }
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);
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````
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It is also possible to update an existing instance's graph instead.
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````javascript
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sigma.parsers.gexf(
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'myGraph.gexf',
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myExistingInstance,
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function() {
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myExistingInstance.refresh();
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}
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);
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````
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;(function(undefined) {
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'use strict';
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/**
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* GEXF Library
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* =============
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*
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* Author: PLIQUE Guillaume (Yomguithereal)
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* URL: https://github.com/Yomguithereal/gexf-parser
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* Version: 0.1.1
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*/
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/**
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* Helper Namespace
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* -----------------
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*
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* A useful batch of function dealing with DOM operations and types.
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*/
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var _helpers = {
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getModelTags: function(xml) {
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var attributesTags = xml.getElementsByTagName('attributes'),
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modelTags = {},
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l = attributesTags.length,
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i;
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for (i = 0; i < l; i++)
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modelTags[attributesTags[i].getAttribute('class')] =
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attributesTags[i].childNodes;
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return modelTags;
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},
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nodeListToArray: function(nodeList) {
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// Return array
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var children = [];
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// Iterating
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for (var i = 0, len = nodeList.length; i < len; ++i) {
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if (nodeList[i].nodeName !== '#text')
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children.push(nodeList[i]);
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}
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return children;
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},
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nodeListEach: function(nodeList, func) {
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// Iterating
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for (var i = 0, len = nodeList.length; i < len; ++i) {
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if (nodeList[i].nodeName !== '#text')
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func(nodeList[i]);
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}
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},
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nodeListToHash: function(nodeList, filter) {
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// Return object
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var children = {};
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// Iterating
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for (var i = 0; i < nodeList.length; i++) {
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if (nodeList[i].nodeName !== '#text') {
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var prop = filter(nodeList[i]);
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children[prop.key] = prop.value;
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}
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}
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return children;
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},
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namedNodeMapToObject: function(nodeMap) {
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// Return object
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var attributes = {};
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// Iterating
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for (var i = 0; i < nodeMap.length; i++) {
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attributes[nodeMap[i].name] = nodeMap[i].value;
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}
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return attributes;
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},
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getFirstElementByTagNS: function(node, ns, tag) {
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var el = node.getElementsByTagName(ns + ':' + tag)[0];
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if (!el)
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el = node.getElementsByTagNameNS(ns, tag)[0];
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if (!el)
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el = node.getElementsByTagName(tag)[0];
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return el;
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},
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getAttributeNS: function(node, ns, attribute) {
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var attr_value = node.getAttribute(ns + ':' + attribute);
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if (attr_value === undefined)
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attr_value = node.getAttributeNS(ns, attribute);
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if (attr_value === undefined)
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attr_value = node.getAttribute(attribute);
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return attr_value;
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},
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enforceType: function(type, value) {
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switch (type) {
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case 'boolean':
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value = (value === 'true');
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break;
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case 'integer':
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case 'long':
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case 'float':
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case 'double':
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value = +value;
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break;
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}
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return value;
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},
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getRGB: function(values) {
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return (values[3]) ?
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'rgba(' + values.join(',') + ')' :
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'rgb(' + values.slice(0, -1).join(',') + ')';
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}
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};
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/**
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* Parser Core Functions
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* ----------------------
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*
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* The XML parser's functions themselves.
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*/
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/**
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* Node structure.
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* A function returning an object guarded with default value.
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*
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* @param {object} properties The node properties.
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* @return {object} The guarded node object.
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*/
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function Node(properties) {
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// Possible Properties
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var node = {
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id: properties.id,
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label: properties.label
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};
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if (properties.viz)
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node.viz = properties.viz;
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if (properties.attributes)
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node.attributes = properties.attributes;
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return node;
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}
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/**
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* Edge structure.
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* A function returning an object guarded with default value.
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*
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* @param {object} properties The edge properties.
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* @return {object} The guarded edge object.
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*/
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function Edge(properties) {
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// Possible Properties
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var edge = {
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id: properties.id,
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type: properties.type || 'undirected',
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label: properties.label || '',
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source: properties.source,
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target: properties.target,
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weight: +properties.weight || 1.0
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};
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if (properties.viz)
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edge.viz = properties.viz;
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if (properties.attributes)
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edge.attributes = properties.attributes;
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return edge;
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}
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/**
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* Graph parser.
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* This structure parse a gexf string and return an object containing the
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* parsed graph.
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*
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* @param {string} xml The xml string of the gexf file to parse.
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* @return {object} The parsed graph.
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*/
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function Graph(xml) {
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var _xml = {};
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// Basic Properties
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//------------------
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_xml.els = {
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root: xml.getElementsByTagName('gexf')[0],
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graph: xml.getElementsByTagName('graph')[0],
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meta: xml.getElementsByTagName('meta')[0],
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nodes: xml.getElementsByTagName('node'),
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edges: xml.getElementsByTagName('edge'),
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model: _helpers.getModelTags(xml)
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};
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// Information
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_xml.hasViz = !!_helpers.getAttributeNS(_xml.els.root, 'xmlns', 'viz');
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_xml.version = _xml.els.root.getAttribute('version') || '1.0';
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_xml.mode = _xml.els.graph.getAttribute('mode') || 'static';
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var edgeType = _xml.els.graph.getAttribute('defaultedgetype');
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_xml.defaultEdgetype = edgeType || 'undirected';
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// Parser Functions
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//------------------
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// Meta Data
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function _metaData() {
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var metas = {};
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if (!_xml.els.meta)
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return metas;
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// Last modified date
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metas.lastmodifieddate = _xml.els.meta.getAttribute('lastmodifieddate');
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// Other information
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_helpers.nodeListEach(_xml.els.meta.childNodes, function(child) {
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metas[child.tagName.toLowerCase()] = child.textContent;
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});
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return metas;
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}
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// Model
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function _model(cls) {
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var attributes = [];
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// Iterating through attributes
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if (_xml.els.model[cls])
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_helpers.nodeListEach(_xml.els.model[cls], function(attr) {
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// Properties
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var properties = {
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id: attr.getAttribute('id') || attr.getAttribute('for'),
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type: attr.getAttribute('type') || 'string',
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title: attr.getAttribute('title') || ''
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};
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// Defaults
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var default_el = _helpers.nodeListToArray(attr.childNodes);
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if (default_el.length > 0)
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properties.defaultValue = default_el[0].textContent;
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// Creating attribute
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attributes.push(properties);
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});
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return attributes.length > 0 ? attributes : false;
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}
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// Data from nodes or edges
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function _data(model, node_or_edge) {
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var data = {};
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var attvalues_els = node_or_edge.getElementsByTagName('attvalue');
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+
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// Getting Node Indicated Attributes
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var ah = _helpers.nodeListToHash(attvalues_els, function(el) {
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var attributes = _helpers.namedNodeMapToObject(el.attributes);
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var key = attributes.id || attributes['for'];
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// Returning object
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return {key: key, value: attributes.value};
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});
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// Iterating through model
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model.map(function(a) {
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// Default value?
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var att_title = a.title.toLowerCase();
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data[att_title] = !(a.id in ah) && 'defaultValue' in a ?
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_helpers.enforceType(a.type, a.defaultValue) :
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_helpers.enforceType(a.type, ah[a.id]);
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});
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+
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return data;
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}
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+
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// Nodes
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function _nodes(model) {
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var nodes = [];
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// Iteration through nodes
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_helpers.nodeListEach(_xml.els.nodes, function(n) {
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// Basic properties
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var properties = {
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id: n.getAttribute('id'),
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label: n.getAttribute('label') || ''
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};
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// Retrieving data from nodes if any
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if (model)
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properties.attributes = _data(model, n);
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+
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// Retrieving viz information
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if (_xml.hasViz)
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properties.viz = _nodeViz(n);
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+
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// Pushing node
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nodes.push(Node(properties));
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});
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return nodes;
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}
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+
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// Viz information from nodes
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function _nodeViz(node) {
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var viz = {};
|
327
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+
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// Color
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329
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var color_el = _helpers.getFirstElementByTagNS(node, 'viz', 'color');
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+
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if (color_el) {
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var color = ['r', 'g', 'b', 'a'].map(function(c) {
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return color_el.getAttribute(c);
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});
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335
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+
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viz.color = _helpers.getRGB(color);
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}
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+
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// Position
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340
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var pos_el = _helpers.getFirstElementByTagNS(node, 'viz', 'position');
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+
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342
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if (pos_el) {
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viz.position = {};
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+
|
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['x', 'y', 'z'].map(function(p) {
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viz.position[p] = +pos_el.getAttribute(p);
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});
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}
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+
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// Size
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351
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var size_el = _helpers.getFirstElementByTagNS(node, 'viz', 'size');
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if (size_el)
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viz.size = +size_el.getAttribute('value');
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+
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// Shape
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356
|
+
var shape_el = _helpers.getFirstElementByTagNS(node, 'viz', 'shape');
|
357
|
+
if (shape_el)
|
358
|
+
viz.shape = shape_el.getAttribute('value');
|
359
|
+
|
360
|
+
return viz;
|
361
|
+
}
|
362
|
+
|
363
|
+
// Edges
|
364
|
+
function _edges(model, default_type) {
|
365
|
+
var edges = [];
|
366
|
+
|
367
|
+
// Iteration through edges
|
368
|
+
_helpers.nodeListEach(_xml.els.edges, function(e) {
|
369
|
+
|
370
|
+
// Creating the edge
|
371
|
+
var properties = _helpers.namedNodeMapToObject(e.attributes);
|
372
|
+
if (!('type' in properties)) {
|
373
|
+
properties.type = default_type;
|
374
|
+
}
|
375
|
+
|
376
|
+
// Retrieving edge data
|
377
|
+
if (model)
|
378
|
+
properties.attributes = _data(model, e);
|
379
|
+
|
380
|
+
|
381
|
+
// Retrieving viz information
|
382
|
+
if (_xml.hasViz)
|
383
|
+
properties.viz = _edgeViz(e);
|
384
|
+
|
385
|
+
edges.push(Edge(properties));
|
386
|
+
});
|
387
|
+
|
388
|
+
return edges;
|
389
|
+
}
|
390
|
+
|
391
|
+
// Viz information from edges
|
392
|
+
function _edgeViz(edge) {
|
393
|
+
var viz = {};
|
394
|
+
|
395
|
+
// Color
|
396
|
+
var color_el = _helpers.getFirstElementByTagNS(edge, 'viz', 'color');
|
397
|
+
|
398
|
+
if (color_el) {
|
399
|
+
var color = ['r', 'g', 'b', 'a'].map(function(c) {
|
400
|
+
return color_el.getAttribute(c);
|
401
|
+
});
|
402
|
+
|
403
|
+
viz.color = _helpers.getRGB(color);
|
404
|
+
}
|
405
|
+
|
406
|
+
// Shape
|
407
|
+
var shape_el = _helpers.getFirstElementByTagNS(edge, 'viz', 'shape');
|
408
|
+
if (shape_el)
|
409
|
+
viz.shape = shape_el.getAttribute('value');
|
410
|
+
|
411
|
+
// Thickness
|
412
|
+
var thick_el = _helpers.getFirstElementByTagNS(edge, 'viz', 'thickness');
|
413
|
+
if (thick_el)
|
414
|
+
viz.thickness = +thick_el.getAttribute('value');
|
415
|
+
|
416
|
+
return viz;
|
417
|
+
}
|
418
|
+
|
419
|
+
|
420
|
+
// Returning the Graph
|
421
|
+
//---------------------
|
422
|
+
var nodeModel = _model('node'),
|
423
|
+
edgeModel = _model('edge');
|
424
|
+
|
425
|
+
var graph = {
|
426
|
+
version: _xml.version,
|
427
|
+
mode: _xml.mode,
|
428
|
+
defaultEdgeType: _xml.defaultEdgetype,
|
429
|
+
meta: _metaData(),
|
430
|
+
model: {},
|
431
|
+
nodes: _nodes(nodeModel),
|
432
|
+
edges: _edges(edgeModel, _xml.defaultEdgetype)
|
433
|
+
};
|
434
|
+
|
435
|
+
if (nodeModel)
|
436
|
+
graph.model.node = nodeModel;
|
437
|
+
if (edgeModel)
|
438
|
+
graph.model.edge = edgeModel;
|
439
|
+
|
440
|
+
return graph;
|
441
|
+
}
|
442
|
+
|
443
|
+
|
444
|
+
/**
|
445
|
+
* Public API
|
446
|
+
* -----------
|
447
|
+
*
|
448
|
+
* User-accessible functions.
|
449
|
+
*/
|
450
|
+
|
451
|
+
// Fetching GEXF with XHR
|
452
|
+
function fetch(gexf_url, callback) {
|
453
|
+
var xhr = (function() {
|
454
|
+
if (window.XMLHttpRequest)
|
455
|
+
return new XMLHttpRequest();
|
456
|
+
|
457
|
+
var names,
|
458
|
+
i;
|
459
|
+
|
460
|
+
if (window.ActiveXObject) {
|
461
|
+
names = [
|
462
|
+
'Msxml2.XMLHTTP.6.0',
|
463
|
+
'Msxml2.XMLHTTP.3.0',
|
464
|
+
'Msxml2.XMLHTTP',
|
465
|
+
'Microsoft.XMLHTTP'
|
466
|
+
];
|
467
|
+
|
468
|
+
for (i in names)
|
469
|
+
try {
|
470
|
+
return new ActiveXObject(names[i]);
|
471
|
+
} catch (e) {}
|
472
|
+
}
|
473
|
+
|
474
|
+
return null;
|
475
|
+
})();
|
476
|
+
|
477
|
+
if (!xhr)
|
478
|
+
throw 'XMLHttpRequest not supported, cannot load the file.';
|
479
|
+
|
480
|
+
// Async?
|
481
|
+
var async = (typeof callback === 'function'),
|
482
|
+
getResult;
|
483
|
+
|
484
|
+
// If we can't override MIME type, we are on IE 9
|
485
|
+
// We'll be parsing the response string then.
|
486
|
+
if (xhr.overrideMimeType) {
|
487
|
+
xhr.overrideMimeType('text/xml');
|
488
|
+
getResult = function(r) {
|
489
|
+
return r.responseXML;
|
490
|
+
};
|
491
|
+
}
|
492
|
+
else {
|
493
|
+
getResult = function(r) {
|
494
|
+
var p = new DOMParser();
|
495
|
+
return p.parseFromString(r.responseText, 'application/xml');
|
496
|
+
};
|
497
|
+
}
|
498
|
+
|
499
|
+
xhr.open('GET', gexf_url, async);
|
500
|
+
|
501
|
+
if (async)
|
502
|
+
xhr.onreadystatechange = function() {
|
503
|
+
if (xhr.readyState === 4)
|
504
|
+
callback(getResult(xhr));
|
505
|
+
};
|
506
|
+
|
507
|
+
xhr.send();
|
508
|
+
|
509
|
+
return (async) ? xhr : getResult(xhr);
|
510
|
+
}
|
511
|
+
|
512
|
+
// Parsing the GEXF File
|
513
|
+
function parse(gexf) {
|
514
|
+
return Graph(gexf);
|
515
|
+
}
|
516
|
+
|
517
|
+
// Fetch and parse the GEXF File
|
518
|
+
function fetchAndParse(gexf_url, callback) {
|
519
|
+
if (typeof callback === 'function') {
|
520
|
+
return fetch(gexf_url, function(gexf) {
|
521
|
+
callback(Graph(gexf));
|
522
|
+
});
|
523
|
+
} else
|
524
|
+
return Graph(fetch(gexf_url));
|
525
|
+
}
|
526
|
+
|
527
|
+
|
528
|
+
/**
|
529
|
+
* Exporting
|
530
|
+
* ----------
|
531
|
+
*/
|
532
|
+
if (typeof this.gexf !== 'undefined')
|
533
|
+
throw 'gexf: error - a variable called "gexf" already ' +
|
534
|
+
'exists in the global scope';
|
535
|
+
|
536
|
+
this.gexf = {
|
537
|
+
|
538
|
+
// Functions
|
539
|
+
parse: parse,
|
540
|
+
fetch: fetchAndParse,
|
541
|
+
|
542
|
+
// Version
|
543
|
+
version: '0.1.1'
|
544
|
+
};
|
545
|
+
|
546
|
+
if (typeof exports !== 'undefined' && this.exports !== exports)
|
547
|
+
module.exports = this.gexf;
|
548
|
+
}).call(this);
|