sequenceserver 1.0.0.pre.5 → 1.0.0

data/spec/sample_reports/tblastx_sample.asn

@@ -0,0 +1,2422 @@
+Blast4-archive ::= {
+  request {
+    ident "2.2.30+",
+    body queue-search {
+      program "tblastx",
+      service "plain",
+      queries bioseq-set {
+        seq-set {
+          seq {
+            id {
+              local str "Query_1"
+            },
+            descr {
+              user {
+                type str "CFastaReader",
+                data {
+                  {
+                    label str "DefLine",
+                    data str ">SI2.2.0_06267
+ Si_gnF.scaffold02592[1282609..1284114].pep_2"
+                  }
+                }
+              },
+              title "SI2.2.0_06267 Si_gnF.scaffold02592[1282609..1284114].pep_2"
+            },
+            inst {
+              repr raw,
+              mol na,
+              length 540,
+              seq-data ncbi2na '38315DE9DDFCEA3CD5AC27D5F01F4EBBF8460A38DE4249
+B3E888D7C493177A4BCDF628554163344987CCCE03CA1835F4C47F9651650503ECF79D634BED80
+83007AD1E8E8613FCD8C005AE0DFB56F043C7E4F7A7DFA779038C1A334408C03E803DE1B843168
+CF01D30EFD70225B316787A39E97D22FBCF59FC4EB7E9DDD90FCD1F37DE35C32FA62'H
+            }
+          }
+        }
+      },
+      subject database "spec/database/sample/transcripts/Solenopsis_invicta/Si
+nvicta2-2-3.cdna.subset.fasta",
+      algorithm-options {
+        {
+          name "EvalueThreshold",
+          value cutoff e-value { 1, 10, 1 }
+        },
+        {
+          name "LongestIntronLength",
+          value integer 0
+        },
+        {
+          name "MaskAtHash",
+          value boolean FALSE
+        },
+        {
+          name "SegFilteringWindow",
+          value integer 12
+        },
+        {
+          name "SegFilteringLocut",
+          value real { 22, 10, -1 }
+        },
+        {
+          name "SegFilteringHicut",
+          value real { 25, 10, -1 }
+        },
+        {
+          name "WordThreshold",
+          value integer 13
+        },
+        {
+          name "WindowSize",
+          value integer 40
+        },
+        {
+          name "QueryGeneticCode",
+          value integer 1
+        },
+        {
+          name "DbGeneticCode",
+          value integer 1
+        },
+        {
+          name "HitlistSize",
+          value integer 500
+        },
+        {
+          name "EffectiveSearchSpace",
+          value big-integer 11955588
+        }
+      }
+    }
+  },
+  results {
+    alignments {
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_06267"
+            },
+            loc {
+              int {
+                from 0,
+                to 539,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 0,
+                to 539,
+                strand plus,
+                id local str "SI2.2.0_06267"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 961
+              },
+              {
+                id str "e_value",
+                value real { 886238171826621, 10, -141 }
+              },
+              {
+                id str "bit_score",
+                value real { 44323857431301, 10, -11 }
+              },
+              {
+                id str "num_ident",
+                value int 180
+              },
+              {
+                id str "num_positives",
+                value int 180
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 338333333333333, 10, -13 }
+              }
+            }
+          },
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_06267"
+            },
+            loc {
+              int {
+                from 0,
+                to 539,
+                strand minus,
+                id local str "Query_1"
+              },
+              int {
+                from 0,
+                to 539,
+                strand minus,
+                id local str "SI2.2.0_06267"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 938
+              },
+              {
+                id str "e_value",
+                value real { 132735983926242, 10, -137 }
+              },
+              {
+                id str "bit_score",
+                value real { 43269977789214, 10, -11 }
+              },
+              {
+                id str "num_ident",
+                value int 180
+              },
+              {
+                id str "num_positives",
+                value int 180
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 338333333333333, 10, -13 }
+              }
+            }
+          },
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_06267"
+            },
+            loc {
+              int {
+                from 1,
+                to 537,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 1,
+                to 537,
+                strand plus,
+                id local str "SI2.2.0_06267"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 921
+              },
+              {
+                id str "e_value",
+                value real { 291696383535039, 10, -135 }
+              },
+              {
+                id str "bit_score",
+                value real { 424910232711496, 10, -12 }
+              },
+              {
+                id str "num_ident",
+                value int 179
+              },
+              {
+                id str "num_positives",
+                value int 179
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 336481481481481, 10, -13 }
+              }
+            }
+          },
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_06267"
+            },
+            loc {
+              int {
+                from 2,
+                to 538,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 2,
+                to 538,
+                strand plus,
+                id local str "SI2.2.0_06267"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 895
+              },
+              {
+                id str "e_value",
+                value real { 112519664897538, 10, -131 }
+              },
+              {
+                id str "bit_score",
+                value real { 412996810670512, 10, -12 }
+              },
+              {
+                id str "num_ident",
+                value int 179
+              },
+              {
+                id str "num_positives",
+                value int 179
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 336481481481481, 10, -13 }
+              }
+            }
+          },
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_06267"
+            },
+            loc {
+              int {
+                from 1,
+                to 537,
+                strand minus,
+                id local str "Query_1"
+              },
+              int {
+                from 1,
+                to 537,
+                strand minus,
+                id local str "SI2.2.0_06267"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 881
+              },
+              {
+                id str "e_value",
+                value real { 966620537509094, 10, -130 }
+              },
+              {
+                id str "bit_score",
+                value real { 406581891109982, 10, -12 }
+              },
+              {
+                id str "num_ident",
+                value int 179
+              },
+              {
+                id str "num_positives",
+                value int 179
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 336481481481481, 10, -13 }
+              }
+            }
+          },
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_06267"
+            },
+            loc {
+              int {
+                from 2,
+                to 538,
+                strand minus,
+                id local str "Query_1"
+              },
+              int {
+                from 2,
+                to 538,
+                strand minus,
+                id local str "SI2.2.0_06267"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 812
+              },
+              {
+                id str "e_value",
+                value real { 318227378269189, 10, -120 }
+              },
+              {
+                id str "bit_score",
+                value real { 374965501847369, 10, -12 }
+              },
+              {
+                id str "num_ident",
+                value int 179
+              },
+              {
+                id str "num_positives",
+                value int 179
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 336481481481481, 10, -13 }
+              }
+            }
+          },
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_06267"
+            },
+            loc {
+              int {
+                from 329,
+                to 370,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 121,
+                to 162,
+                strand plus,
+                id local str "SI2.2.0_06267"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 40
+              },
+              {
+                id str "e_value",
+                value real { 966581774245886, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 212285089381423, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 7
+              },
+              {
+                id str "num_positives",
+                value int 7
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 309259259259259, 10, -14 }
+              }
+            }
+          },
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_06267"
+            },
+            loc {
+              int {
+                from 121,
+                to 162,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 329,
+                to 370,
+                strand plus,
+                id local str "SI2.2.0_06267"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 40
+              },
+              {
+                id str "e_value",
+                value real { 966581774245886, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 212285089381423, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 7
+              },
+              {
+                id str "num_positives",
+                value int 7
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 309259259259259, 10, -14 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_03649"
+            },
+            loc {
+              int {
+                from 168,
+                to 212,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 733,
+                to 777,
+                strand minus,
+                id local str "SI2.2.0_03649"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 42
+              },
+              {
+                id str "sum_n",
+                value int 2
+              },
+              {
+                id str "e_value",
+                value real { 223266389357325, 10, -15 }
+              },
+              {
+                id str "bit_score",
+                value real { 22144926018218, 10, -12 }
+              },
+              {
+                id str "num_ident",
+                value int 8
+              },
+              {
+                id str "num_positives",
+                value int 10
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 327777777777778, 10, -14 }
+              }
+            }
+          },
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_03649"
+            },
+            loc {
+              int {
+                from 201,
+                to 254,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 688,
+                to 741,
+                strand minus,
+                id local str "SI2.2.0_03649"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 40
+              },
+              {
+                id str "sum_n",
+                value int 2
+              },
+              {
+                id str "e_value",
+                value real { 223266389357325, 10, -15 }
+              },
+              {
+                id str "bit_score",
+                value real { 212285089381423, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 7
+              },
+              {
+                id str "num_positives",
+                value int 10
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 383333333333333, 10, -14 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_00906"
+            },
+            loc {
+              int {
+                from 166,
+                to 234,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 4,
+                to 72,
+                strand plus,
+                id local str "SI2.2.0_00906"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 50
+              },
+              {
+                id str "e_value",
+                value real { 403546377981801, 10, -15 }
+              },
+              {
+                id str "bit_score",
+                value real { 258105943385209, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 9
+              },
+              {
+                id str "num_positives",
+                value int 14
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 475925925925926, 10, -14 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_10643"
+            },
+            loc {
+              int {
+                from 316,
+                to 396,
+                strand minus,
+                id local str "Query_1"
+              },
+              int {
+                from 165,
+                to 245,
+                strand minus,
+                id local str "SI2.2.0_10643"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 46
+              },
+              {
+                id str "e_value",
+                value real { 143757831456381, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 239777601783694, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 14
+              },
+              {
+                id str "num_positives",
+                value int 15
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 55, 10, -1 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_08520"
+            },
+            loc {
+              int {
+                from 58,
+                to 117,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 120,
+                to 179,
+                strand plus,
+                id local str "SI2.2.0_08520"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 46
+              },
+              {
+                id str "e_value",
+                value real { 143757831456381, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 239777601783694, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 10
+              },
+              {
+                id str "num_positives",
+                value int 11
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 42037037037037, 10, -13 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_08362"
+            },
+            loc {
+              int {
+                from 186,
+                to 236,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 265,
+                to 315,
+                strand minus,
+                id local str "SI2.2.0_08362"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 46
+              },
+              {
+                id str "e_value",
+                value real { 144735775888057, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 239777601783694, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 8
+              },
+              {
+                id str "num_positives",
+                value int 11
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 364814814814815, 10, -14 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_00417"
+            },
+            loc {
+              int {
+                from 144,
+                to 257,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 91,
+                to 204,
+                strand plus,
+                id local str "SI2.2.0_00417"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 46
+              },
+              {
+                id str "e_value",
+                value real { 144735775888057, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 239777601783694, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 11
+              },
+              {
+                id str "num_positives",
+                value int 19
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 753703703703704, 10, -14 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_02651"
+            },
+            loc {
+              int {
+                from 333,
+                to 404,
+                strand minus,
+                id local str "Query_1"
+              },
+              int {
+                from 1667,
+                to 1738,
+                strand minus,
+                id local str "SI2.2.0_02651"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 46
+              },
+              {
+                id str "e_value",
+                value real { 144735775888057, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 239777601783694, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 7
+              },
+              {
+                id str "num_positives",
+                value int 14
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 494444444444444, 10, -14 }
+              }
+            }
+          },
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_02651"
+            },
+            loc {
+              int {
+                from 366,
+                to 398,
+                strand minus,
+                id local str "Query_1"
+              },
+              int {
+                from 1698,
+                to 1730,
+                strand minus,
+                id local str "SI2.2.0_02651"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 40
+              },
+              {
+                id str "e_value",
+                value real { 973157160465245, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 212285089381423, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 6
+              },
+              {
+                id str "num_positives",
+                value int 8
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 253703703703704, 10, -14 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_09826"
+            },
+            loc {
+              int {
+                from 455,
+                to 496,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 155,
+                to 196,
+                strand minus,
+                id local str "SI2.2.0_09826"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 44
+              },
+              {
+                id str "e_value",
+                value real { 271331704205974, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 230613430982937, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 8
+              },
+              {
+                id str "num_positives",
+                value int 10
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 309259259259259, 10, -14 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_03432"
+            },
+            loc {
+              int {
+                from 150,
+                to 194,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 37,
+                to 81,
+                strand plus,
+                id local str "SI2.2.0_03432"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 44
+              },
+              {
+                id str "e_value",
+                value real { 273177498112137, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 230613430982937, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 8
+              },
+              {
+                id str "num_positives",
+                value int 12
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 327777777777778, 10, -14 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_07987"
+            },
+            loc {
+              int {
+                from 408,
+                to 485,
+                strand minus,
+                id local str "Query_1"
+              },
+              int {
+                from 354,
+                to 431,
+                strand plus,
+                id local str "SI2.2.0_07987"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 43
+              },
+              {
+                id str "e_value",
+                value real { 375300754969872, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 226031345582559, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 8
+              },
+              {
+                id str "num_positives",
+                value int 15
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 531481481481481, 10, -14 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_16505"
+            },
+            loc {
+              int {
+                from 183,
+                to 212,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 2651,
+                to 2680,
+                strand minus,
+                id local str "SI2.2.0_16505"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 43
+              },
+              {
+                id str "e_value",
+                value real { 375300754969872, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 226031345582559, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 7
+              },
+              {
+                id str "num_positives",
+                value int 8
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 235185185185185, 10, -14 }
+              }
+            }
+          },
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_16505"
+            },
+            loc {
+              int {
+                from 201,
+                to 221,
+                strand minus,
+                id local str "Query_1"
+              },
+              int {
+                from 2369,
+                to 2389,
+                strand plus,
+                id local str "SI2.2.0_16505"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 40
+              },
+              {
+                id str "e_value",
+                value real { 973157160465245, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 212285089381423, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 5
+              },
+              {
+                id str "num_positives",
+                value int 6
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 17962962962963, 10, -13 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_02329"
+            },
+            loc {
+              int {
+                from 294,
+                to 437,
+                strand minus,
+                id local str "Query_1"
+              },
+              int {
+                from 1776,
+                to 1919,
+                strand plus,
+                id local str "SI2.2.0_02329"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 42
+              },
+              {
+                id str "e_value",
+                value real { 515601239686065, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 22144926018218, 10, -12 }
+              },
+              {
+                id str "num_ident",
+                value int 7
+              },
+              {
+                id str "num_positives",
+                value int 20
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 938888888888889, 10, -14 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_04131"
+            },
+            loc {
+              int {
+                from 342,
+                to 404,
+                strand minus,
+                id local str "Query_1"
+              },
+              int {
+                from 2263,
+                to 2325,
+                strand minus,
+                id local str "SI2.2.0_04131"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 42
+              },
+              {
+                id str "e_value",
+                value real { 515601239686065, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 22144926018218, 10, -12 }
+              },
+              {
+                id str "num_ident",
+                value int 9
+              },
+              {
+                id str "num_positives",
+                value int 12
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 438888888888889, 10, -14 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_05280"
+            },
+            loc {
+              int {
+                from 186,
+                to 263,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 52,
+                to 129,
+                strand minus,
+                id local str "SI2.2.0_05280"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 42
+              },
+              {
+                id str "e_value",
+                value real { 515601239686065, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 22144926018218, 10, -12 }
+              },
+              {
+                id str "num_ident",
+                value int 9
+              },
+              {
+                id str "num_positives",
+                value int 12
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 531481481481481, 10, -14 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_11015"
+            },
+            loc {
+              int {
+                from 168,
+                to 269,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 650,
+                to 751,
+                strand minus,
+                id local str "SI2.2.0_11015"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 42
+              },
+              {
+                id str "e_value",
+                value real { 515601239686065, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 22144926018218, 10, -12 }
+              },
+              {
+                id str "num_ident",
+                value int 9
+              },
+              {
+                id str "num_positives",
+                value int 14
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 67962962962963, 10, -13 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_11287"
+            },
+            loc {
+              int {
+                from 12,
+                to 47,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 267,
+                to 302,
+                strand plus,
+                id local str "SI2.2.0_11287"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 42
+              },
+              {
+                id str "e_value",
+                value real { 515601239686065, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 22144926018218, 10, -12 }
+              },
+              {
+                id str "num_ident",
+                value int 7
+              },
+              {
+                id str "num_positives",
+                value int 9
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 272222222222222, 10, -14 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_80469"
+            },
+            loc {
+              int {
+                from 98,
+                to 142,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 490,
+                to 534,
+                strand minus,
+                id local str "SI2.2.0_80469"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 41
+              },
+              {
+                id str "e_value",
+                value real { 70356477388509, 10, -13 }
+              },
+              {
+                id str "bit_score",
+                value real { 216867174781801, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 8
+              },
+              {
+                id str "num_positives",
+                value int 11
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 327777777777778, 10, -14 }
+              }
+            }
+          },
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_80469"
+            },
+            loc {
+              int {
+                from 144,
+                to 212,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 181,
+                to 249,
+                strand plus,
+                id local str "SI2.2.0_80469"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 41
+              },
+              {
+                id str "e_value",
+                value real { 708350928809479, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 216867174781801, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 8
+              },
+              {
+                id str "num_positives",
+                value int 12
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 475925925925926, 10, -14 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_05326"
+            },
+            loc {
+              int {
+                from 10,
+                to 78,
+                strand minus,
+                id local str "Query_1"
+              },
+              int {
+                from 114,
+                to 182,
+                strand plus,
+                id local str "SI2.2.0_05326"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 41
+              },
+              {
+                id str "e_value",
+                value real { 70356477388509, 10, -13 }
+              },
+              {
+                id str "bit_score",
+                value real { 216867174781801, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 7
+              },
+              {
+                id str "num_positives",
+                value int 14
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 475925925925926, 10, -14 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_00222"
+            },
+            loc {
+              int {
+                from 29,
+                to 103,
+                strand minus,
+                id local str "Query_1"
+              },
+              int {
+                from 295,
+                to 369,
+                strand plus,
+                id local str "SI2.2.0_00222"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 41
+              },
+              {
+                id str "e_value",
+                value real { 70356477388509, 10, -13 }
+              },
+              {
+                id str "bit_score",
+                value real { 216867174781801, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 11
+              },
+              {
+                id str "num_positives",
+                value int 15
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 512962962962963, 10, -14 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_11111"
+            },
+            loc {
+              int {
+                from 85,
+                to 207,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 429,
+                to 551,
+                strand plus,
+                id local str "SI2.2.0_11111"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 41
+              },
+              {
+                id str "e_value",
+                value real { 70356477388509, 10, -13 }
+              },
+              {
+                id str "bit_score",
+                value real { 216867174781801, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 10
+              },
+              {
+                id str "num_positives",
+                value int 20
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 809259259259259, 10, -14 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_11859"
+            },
+            loc {
+              int {
+                from 181,
+                to 210,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 118,
+                to 147,
+                strand minus,
+                id local str "SI2.2.0_11859"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 41
+              },
+              {
+                id str "e_value",
+                value real { 70356477388509, 10, -13 }
+              },
+              {
+                id str "bit_score",
+                value real { 216867174781801, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 6
+              },
+              {
+                id str "num_positives",
+                value int 9
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 235185185185185, 10, -14 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_08869"
+            },
+            loc {
+              int {
+                from 366,
+                to 437,
+                strand minus,
+                id local str "Query_1"
+              },
+              int {
+                from 121,
+                to 192,
+                strand minus,
+                id local str "SI2.2.0_08869"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 41
+              },
+              {
+                id str "e_value",
+                value real { 708350928809479, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 216867174781801, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 6
+              },
+              {
+                id str "num_positives",
+                value int 14
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 494444444444444, 10, -14 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_00796"
+            },
+            loc {
+              int {
+                from 198,
+                to 266,
+                strand minus,
+                id local str "Query_1"
+              },
+              int {
+                from 193,
+                to 261,
+                strand plus,
+                id local str "SI2.2.0_00796"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 41
+              },
+              {
+                id str "e_value",
+                value real { 708350928809479, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 216867174781801, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 9
+              },
+              {
+                id str "num_positives",
+                value int 11
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 475925925925926, 10, -14 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_05091"
+            },
+            loc {
+              int {
+                from 473,
+                to 532,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 791,
+                to 850,
+                strand plus,
+                id local str "SI2.2.0_05091"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 40
+              },
+              {
+                id str "e_value",
+                value real { 966581774245886, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 212285089381423, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 8
+              },
+              {
+                id str "num_positives",
+                value int 11
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 42037037037037, 10, -13 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_08637"
+            },
+            loc {
+              int {
+                from 169,
+                to 222,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 59,
+                to 112,
+                strand minus,
+                id local str "SI2.2.0_08637"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 40
+              },
+              {
+                id str "e_value",
+                value real { 966581774245886, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 212285089381423, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 7
+              },
+              {
+                id str "num_positives",
+                value int 11
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 383333333333333, 10, -14 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_10912"
+            },
+            loc {
+              int {
+                from 430,
+                to 510,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 122,
+                to 202,
+                strand minus,
+                id local str "SI2.2.0_10912"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 40
+              },
+              {
+                id str "e_value",
+                value real { 966581774245886, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 212285089381423, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 11
+              },
+              {
+                id str "num_positives",
+                value int 12
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 55, 10, -1 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_03440"
+            },
+            loc {
+              int {
+                from 338,
+                to 382,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 447,
+                to 491,
+                strand plus,
+                id local str "SI2.2.0_03440"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 40
+              },
+              {
+                id str "e_value",
+                value real { 966581774245886, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 212285089381423, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 7
+              },
+              {
+                id str "num_positives",
+                value int 10
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 327777777777778, 10, -14 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_03352"
+            },
+            loc {
+              int {
+                from 151,
+                to 204,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 856,
+                to 909,
+                strand minus,
+                id local str "SI2.2.0_03352"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 40
+              },
+              {
+                id str "e_value",
+                value real { 966581774245886, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 212285089381423, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 7
+              },
+              {
+                id str "num_positives",
+                value int 9
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 383333333333333, 10, -14 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_07860"
+            },
+            loc {
+              int {
+                from 198,
+                to 260,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 587,
+                to 649,
+                strand minus,
+                id local str "SI2.2.0_07860"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 40
+              },
+              {
+                id str "e_value",
+                value real { 973157160465245, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 212285089381423, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 8
+              },
+              {
+                id str "num_positives",
+                value int 9
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 438888888888889, 10, -14 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_08266"
+            },
+            loc {
+              int {
+                from 402,
+                to 425,
+                strand minus,
+                id local str "Query_1"
+              },
+              int {
+                from 165,
+                to 188,
+                strand plus,
+                id local str "SI2.2.0_08266"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 40
+              },
+              {
+                id str "e_value",
+                value real { 973157160465245, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 212285089381423, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 6
+              },
+              {
+                id str "num_positives",
+                value int 8
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 198148148148148, 10, -14 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_05139"
+            },
+            loc {
+              int {
+                from 375,
+                to 407,
+                strand minus,
+                id local str "Query_1"
+              },
+              int {
+                from 15,
+                to 47,
+                strand minus,
+                id local str "SI2.2.0_05139"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 40
+              },
+              {
+                id str "e_value",
+                value real { 973157160465245, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 212285089381423, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 8
+              },
+              {
+                id str "num_positives",
+                value int 8
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 253703703703704, 10, -14 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_01901"
+            },
+            loc {
+              int {
+                from 468,
+                to 539,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 187,
+                to 258,
+                strand plus,
+                id local str "SI2.2.0_01901"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 40
+              },
+              {
+                id str "e_value",
+                value real { 973157160465245, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 212285089381423, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 9
+              },
+              {
+                id str "num_positives",
+                value int 15
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 494444444444444, 10, -14 }
+              }
+            }
+          }
+        }
+      },
+      {
+        type diags,
+        segs std {
+          {
+            dim 2,
+            ids {
+              local str "Query_1",
+              local str "SI2.2.0_10541"
+            },
+            loc {
+              int {
+                from 468,
+                to 539,
+                strand plus,
+                id local str "Query_1"
+              },
+              int {
+                from 13,
+                to 84,
+                strand plus,
+                id local str "SI2.2.0_10541"
+              }
+            },
+            scores {
+              {
+                id str "score",
+                value int 40
+              },
+              {
+                id str "e_value",
+                value real { 973157160465245, 10, -14 }
+              },
+              {
+                id str "bit_score",
+                value real { 212285089381423, 10, -13 }
+              },
+              {
+                id str "num_ident",
+                value int 9
+              },
+              {
+                id str "num_positives",
+                value int 15
+              },
+              {
+                id str "hsp_percent_coverage",
+                value real { 494444444444444, 10, -14 }
+              }
+            }
+          }
+        }
+      }
+    },
+    masks {
+      {
+        locations {
+          packed-int {
+            {
+              from 350,
+              to 382,
+              id local str "Query_1"
+            }
+          }
+        },
+        frame minus2
+      }
+    },
+    ka-blocks {
+      {
+        lambda { 317605957635731, 10, -15 },
+        k { 133956144488482, 10, -15 },
+        h { 401214524497119, 10, -15 },
+        gapped FALSE
+      },
+      {
+        lambda { -1, 10, 0 },
+        k { -1, 10, 0 },
+        h { -1, 10, 0 },
+        gapped TRUE
+      }
+    },
+    search-stats {
+      "Effective search space: 11955588",
+      "Effective search space used: 11955588",
+      "Length adjustment: 32"
+    }
+  }
+}