see5-installer 0.1.0
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- checksums.yaml +7 -0
- data/.gitignore +8 -0
- data/.rubocop.yml +11 -0
- data/CHANGELOG.md +5 -0
- data/Gemfile +10 -0
- data/README.md +29 -0
- data/Rakefile +12 -0
- data/ext/c5.0/Makefile +86 -0
- data/ext/c5.0/attwinnow.c +394 -0
- data/ext/c5.0/c50.c +330 -0
- data/ext/c5.0/classify.c +700 -0
- data/ext/c5.0/confmat.c +195 -0
- data/ext/c5.0/construct.c +853 -0
- data/ext/c5.0/contin.c +613 -0
- data/ext/c5.0/defns.i +788 -0
- data/ext/c5.0/discr.c +307 -0
- data/ext/c5.0/extern.i +170 -0
- data/ext/c5.0/formrules.c +720 -0
- data/ext/c5.0/formtree.c +1158 -0
- data/ext/c5.0/getdata.c +521 -0
- data/ext/c5.0/getnames.c +733 -0
- data/ext/c5.0/global.c +211 -0
- data/ext/c5.0/gpl.txt +674 -0
- data/ext/c5.0/implicitatt.c +1112 -0
- data/ext/c5.0/info.c +146 -0
- data/ext/c5.0/mcost.c +138 -0
- data/ext/c5.0/modelfiles.c +952 -0
- data/ext/c5.0/p-thresh.c +313 -0
- data/ext/c5.0/prune.c +1069 -0
- data/ext/c5.0/report.c +345 -0
- data/ext/c5.0/rules.c +579 -0
- data/ext/c5.0/ruletree.c +398 -0
- data/ext/c5.0/siftrules.c +1285 -0
- data/ext/c5.0/sort.c +156 -0
- data/ext/c5.0/subset.c +599 -0
- data/ext/c5.0/text.i +223 -0
- data/ext/c5.0/trees.c +740 -0
- data/ext/c5.0/update.c +129 -0
- data/ext/c5.0/utility.c +1146 -0
- data/ext/c5.0/xval +150 -0
- data/ext/c5.0/xval.c +402 -0
- data/ext/gritbot/Makefile +98 -0
- data/ext/gritbot/check.c +1110 -0
- data/ext/gritbot/cluster.c +342 -0
- data/ext/gritbot/common.c +1269 -0
- data/ext/gritbot/continatt.c +412 -0
- data/ext/gritbot/defns.i +623 -0
- data/ext/gritbot/discratt.c +459 -0
- data/ext/gritbot/extern.i +101 -0
- data/ext/gritbot/getdata.c +329 -0
- data/ext/gritbot/getnames.c +573 -0
- data/ext/gritbot/global.c +104 -0
- data/ext/gritbot/gpl.txt +674 -0
- data/ext/gritbot/gritbot.c +295 -0
- data/ext/gritbot/implicitatt.c +1108 -0
- data/ext/gritbot/inspect.c +794 -0
- data/ext/gritbot/modelfiles.c +687 -0
- data/ext/gritbot/outlier.c +415 -0
- data/ext/gritbot/sort.c +130 -0
- data/ext/gritbot/text.i +159 -0
- data/ext/gritbot/update.c +126 -0
- data/ext/gritbot/utility.c +1029 -0
- data/ext/see5-installer/extconf.rb +25 -0
- data/lib/see5/installer.rb +10 -0
- data/lib/see5/installer/version.rb +7 -0
- data/see5-installer.gemspec +30 -0
- metadata +115 -0
data/ext/c5.0/sort.c
ADDED
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/*************************************************************************/
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/* */
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/* Copyright 2010 Rulequest Research Pty Ltd. */
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/* */
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/* This file is part of C5.0 GPL Edition, a single-threaded version */
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/* of C5.0 release 2.07. */
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/* */
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/* C5.0 GPL Edition is free software: you can redistribute it and/or */
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/* modify it under the terms of the GNU General Public License as */
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/* published by the Free Software Foundation, either version 3 of the */
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/* License, or (at your option) any later version. */
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/* */
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/* C5.0 GPL Edition is distributed in the hope that it will be useful, */
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/* but WITHOUT ANY WARRANTY; without even the implied warranty of */
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/* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU */
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/* General Public License for more details. */
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/* */
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/* You should have received a copy of the GNU General Public License */
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/* (gpl.txt) along with C5.0 GPL Edition. If not, see */
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/* */
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/* <http://www.gnu.org/licenses/>. */
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/* */
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/*************************************************************************/
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/*************************************************************************/
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/* */
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/* Sorting utilities */
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/* ----------------- */
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/* */
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/*************************************************************************/
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#include "defns.i"
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#include "extern.i"
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#define SwapSRec(a,b) {Xab=SRec[a]; SRec[a]=SRec[b]; SRec[b]=Xab;}
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/*************************************************************************/
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/* */
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/* Sort elements Fp to Lp of SRec */
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/* */
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/*************************************************************************/
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void Cachesort(CaseNo Fp, CaseNo Lp, SortRec *SRec)
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/* --------- */
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{
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CaseNo i, Middle, High;
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ContValue Thresh, Val;
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SortRec Xab;
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while ( Fp < Lp )
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{
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Thresh = SRec[(Fp+Lp) / 2].V;
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/* Divide elements into three groups:
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Fp .. Middle-1: values < Thresh
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Middle .. High: values = Thresh
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High+1 .. Lp: values > Thresh */
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for ( Middle = Fp ; SRec[Middle].V < Thresh ; Middle++ )
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;
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for ( High = Lp ; SRec[High].V > Thresh ; High-- )
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;
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for ( i = Middle ; i <= High ; )
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{
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if ( (Val = SRec[i].V) < Thresh )
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{
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SwapSRec(Middle, i);
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Middle++;
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i++;
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}
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else
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if ( Val > Thresh )
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{
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SwapSRec(High, i);
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High--;
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}
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else
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{
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i++;
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}
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}
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/* Sort the first group */
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Cachesort(Fp, Middle-1, SRec);
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/* Continue with the last group */
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Fp = High+1;
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}
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}
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/*************************************************************************/
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/* */
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/* Sort cases from Fp to Lp on attribute Att */
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/* */
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/*************************************************************************/
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void Quicksort(CaseNo Fp, CaseNo Lp, Attribute Att)
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/* --------- */
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{
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CaseNo i, Middle, High;
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ContValue Thresh, Val;
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if ( Fp < Lp )
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{
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Thresh = CVal(Case[(Fp+Lp) / 2], Att);
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/* Divide cases into three groups:
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Fp .. Middle-1: values < Thresh
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Middle .. High: values = Thresh
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High+1 .. Lp: values > Thresh */
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for ( Middle = Fp ; CVal(Case[Middle], Att) < Thresh ; Middle++ )
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;
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for ( High = Lp ; CVal(Case[High], Att) > Thresh ; High-- )
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;
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for ( i = Middle ; i <= High ; )
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{
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if ( (Val = CVal(Case[i], Att)) < Thresh )
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{
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Swap(Middle, i);
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Middle++;
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i++;
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}
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else
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if ( Val > Thresh )
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{
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Swap(High, i);
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High--;
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}
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else
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{
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i++;
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}
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}
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/* Sort the first and third groups */
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Quicksort(Fp, Middle-1, Att);
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Quicksort(High+1, Lp, Att);
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}
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}
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data/ext/c5.0/subset.c
ADDED
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/*************************************************************************/
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/* */
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/* Copyright 2010 Rulequest Research Pty Ltd. */
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/* */
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5
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/* This file is part of C5.0 GPL Edition, a single-threaded version */
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/* of C5.0 release 2.07. */
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/* */
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/* C5.0 GPL Edition is free software: you can redistribute it and/or */
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/* modify it under the terms of the GNU General Public License as */
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/* published by the Free Software Foundation, either version 3 of the */
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/* License, or (at your option) any later version. */
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/* */
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/* C5.0 GPL Edition is distributed in the hope that it will be useful, */
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14
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/* but WITHOUT ANY WARRANTY; without even the implied warranty of */
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15
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/* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU */
|
16
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/* General Public License for more details. */
|
17
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/* */
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18
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+
/* You should have received a copy of the GNU General Public License */
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19
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/* (gpl.txt) along with C5.0 GPL Edition. If not, see */
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20
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/* */
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21
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/* <http://www.gnu.org/licenses/>. */
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/* */
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/*************************************************************************/
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/*************************************************************************/
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/* */
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/* Evaluation of discrete attribute subsets */
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/* ---------------------------------------- */
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/* */
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/*************************************************************************/
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#include "defns.i"
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#include "extern.i"
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/*************************************************************************/
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/* */
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/* Set up tables for subsets */
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/* */
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/*************************************************************************/
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void InitialiseBellNumbers()
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/* --------------------- */
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{
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50
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DiscrValue n, k;
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+
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/* Table of Bell numbers (used for subset test penalties) */
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53
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Bell = AllocZero(MaxDiscrVal+1, double *);
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ForEach(n, 1, MaxDiscrVal)
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{
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Bell[n] = AllocZero(n+1, double);
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58
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ForEach(k, 1, n)
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59
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{
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60
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Bell[n][k] = ( k == 1 || k == n ? 1 :
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61
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Bell[n-1][k-1] + k * Bell[n-1][k] );
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62
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}
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63
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}
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}
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66
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67
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68
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/*************************************************************************/
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69
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/* */
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70
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/* Evaluate subsetting a discrete attribute and form the chosen */
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/* subsets Subset[Att][], setting Subsets[Att] to the number of */
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/* subsets, and the Info[] and Gain[] of a test on the attribute */
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73
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/* */
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74
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/*************************************************************************/
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75
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76
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77
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void EvalSubset(Attribute Att, CaseCount Cases)
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/* ---------- */
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79
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{
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80
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DiscrValue V1, V2, V3, BestV1, BestV2, InitialBlocks, First=1, Prelim=0;
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81
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ClassNo c;
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82
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double BaseInfo, ThisGain, ThisInfo, Penalty, UnknownRate,
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Val, BestVal, BestGain, BestInfo, PrevGain, PrevInfo;
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84
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int MissingValues=0;
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85
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CaseCount KnownCases;
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86
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Boolean Better;
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87
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+
|
88
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/* First compute Freq[][], ValFreq[], base info, and the gain
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89
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and total info of a split on discrete attribute Att */
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90
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+
|
91
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SetDiscrFreq(Att);
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92
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+
|
93
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GEnv.ReasonableSubsets = 0;
|
94
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ForEach(c, 1, MaxAttVal[Att])
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95
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{
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96
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if ( GEnv.ValFreq[c] >= MINITEMS ) GEnv.ReasonableSubsets++;
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97
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+
}
|
98
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+
|
99
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if ( ! GEnv.ReasonableSubsets )
|
100
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{
|
101
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Verbosity(2,
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102
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fprintf(Of, "\tAtt %s: poor initial split\n", AttName[Att]))
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103
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+
|
104
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return;
|
105
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+
}
|
106
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+
|
107
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KnownCases = Cases - GEnv.ValFreq[0];
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108
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UnknownRate = GEnv.ValFreq[0] / Cases;
|
109
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+
|
110
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BaseInfo = ( ! GEnv.ValFreq[0] ? GlobalBaseInfo :
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111
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DiscrKnownBaseInfo(KnownCases, MaxAttVal[Att]) );
|
112
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+
|
113
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PrevGain = ComputeGain(BaseInfo, UnknownRate, MaxAttVal[Att], KnownCases);
|
114
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PrevInfo = TotalInfo(GEnv.ValFreq, 0, MaxAttVal[Att]) / Cases;
|
115
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+
BestVal = PrevGain / PrevInfo;
|
116
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+
|
117
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Verbosity(2, fprintf(Of, "\tAtt %s", AttName[Att]))
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118
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+
Verbosity(3, PrintDistribution(Att, 0, MaxAttVal[Att], GEnv.Freq,
|
119
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+
GEnv.ValFreq, true))
|
120
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+
Verbosity(2,
|
121
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fprintf(Of, "\tinitial inf %.3f, gain %.3f, val=%.3f\n",
|
122
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PrevInfo, PrevGain, BestVal))
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123
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+
|
124
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/* Eliminate unrepresented attribute values from Freq[] and ValFreq[]
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125
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and form a separate subset for each represented attribute value.
|
126
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Unrepresented N/A values are ignored */
|
127
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+
|
128
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+
GEnv.Bytes = (MaxAttVal[Att]>>3) + 1;
|
129
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+
ClearBits(GEnv.Bytes, Subset[Att][0]);
|
130
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+
|
131
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GEnv.Blocks = 0;
|
132
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+
ForEach(V1, 1, MaxAttVal[Att])
|
133
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+
{
|
134
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+
if ( GEnv.ValFreq[V1] > Epsilon || V1 == 1 && SomeNA[Att] )
|
135
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+
{
|
136
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+
if ( ++GEnv.Blocks < V1 )
|
137
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+
{
|
138
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+
GEnv.ValFreq[GEnv.Blocks] = GEnv.ValFreq[V1];
|
139
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+
ForEach(c, 1, MaxClass)
|
140
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+
{
|
141
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+
GEnv.Freq[GEnv.Blocks][c] = GEnv.Freq[V1][c];
|
142
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+
}
|
143
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+
}
|
144
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+
ClearBits(GEnv.Bytes, GEnv.WSubset[GEnv.Blocks]);
|
145
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+
SetBit(V1, GEnv.WSubset[GEnv.Blocks]);
|
146
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+
CopyBits(GEnv.Bytes, GEnv.WSubset[GEnv.Blocks],
|
147
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+
Subset[Att][GEnv.Blocks]);
|
148
|
+
|
149
|
+
/* Cannot merge N/A values with other blocks */
|
150
|
+
|
151
|
+
if ( V1 == 1 ) First = 2;
|
152
|
+
}
|
153
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+
else
|
154
|
+
if ( V1 != 1 )
|
155
|
+
{
|
156
|
+
SetBit(V1, Subset[Att][0]);
|
157
|
+
MissingValues++;
|
158
|
+
}
|
159
|
+
}
|
160
|
+
|
161
|
+
/* Set n-way branch as initial test */
|
162
|
+
|
163
|
+
Gain[Att] = PrevGain;
|
164
|
+
Info[Att] = PrevInfo;
|
165
|
+
Subsets[Att] = InitialBlocks = GEnv.Blocks;
|
166
|
+
|
167
|
+
/* As a preliminary step, merge values with identical distributions */
|
168
|
+
|
169
|
+
ForEach(V1, First, GEnv.Blocks-1)
|
170
|
+
{
|
171
|
+
ForEach(V2, V1+1, GEnv.Blocks)
|
172
|
+
{
|
173
|
+
if ( SameDistribution(V1, V2) )
|
174
|
+
{
|
175
|
+
Prelim = V1;
|
176
|
+
AddBlock(V1, V2);
|
177
|
+
}
|
178
|
+
}
|
179
|
+
|
180
|
+
/* Eliminate any merged values */
|
181
|
+
|
182
|
+
if ( Prelim == V1 )
|
183
|
+
{
|
184
|
+
V3 = V1;
|
185
|
+
|
186
|
+
ForEach(V2, V1+1, GEnv.Blocks)
|
187
|
+
{
|
188
|
+
if ( GEnv.ValFreq[V2] && ++V3 != V2 )
|
189
|
+
{
|
190
|
+
MoveBlock(V3, V2);
|
191
|
+
}
|
192
|
+
}
|
193
|
+
|
194
|
+
GEnv.Blocks = V3;
|
195
|
+
}
|
196
|
+
}
|
197
|
+
|
198
|
+
if ( Prelim )
|
199
|
+
{
|
200
|
+
PrevInfo = TotalInfo(GEnv.ValFreq, 0, GEnv.Blocks) / Cases;
|
201
|
+
|
202
|
+
Penalty = ( finite(Bell[InitialBlocks][GEnv.Blocks]) ?
|
203
|
+
Log(Bell[InitialBlocks][GEnv.Blocks]) :
|
204
|
+
(InitialBlocks-GEnv.Blocks+1) * Log(GEnv.Blocks) );
|
205
|
+
|
206
|
+
Val = (PrevGain - Penalty / Cases) / PrevInfo;
|
207
|
+
Better = ( GEnv.Blocks >= 2 && GEnv.ReasonableSubsets >= 2 &&
|
208
|
+
Val >= BestVal );
|
209
|
+
|
210
|
+
Verbosity(2,
|
211
|
+
{
|
212
|
+
fprintf(Of, "\tprelim merges -> inf %.3f, gain %.3f, val %.3f%s%s",
|
213
|
+
PrevInfo, PrevGain, Val,
|
214
|
+
( Better ? " **" : "" ),
|
215
|
+
(VERBOSITY > 2 ? "" : "\n" ));
|
216
|
+
Verbosity(3, PrintDistribution(Att, 0, GEnv.Blocks, GEnv.Freq,
|
217
|
+
GEnv.ValFreq, false))
|
218
|
+
})
|
219
|
+
|
220
|
+
if ( Better )
|
221
|
+
{
|
222
|
+
Subsets[Att] = GEnv.Blocks;
|
223
|
+
|
224
|
+
ForEach(V1, 1, GEnv.Blocks)
|
225
|
+
{
|
226
|
+
CopyBits(GEnv.Bytes, GEnv.WSubset[V1], Subset[Att][V1]);
|
227
|
+
}
|
228
|
+
|
229
|
+
Info[Att] = PrevInfo;
|
230
|
+
Gain[Att] = PrevGain - Penalty / KnownCases;
|
231
|
+
BestVal = Val;
|
232
|
+
}
|
233
|
+
}
|
234
|
+
|
235
|
+
/* Determine initial information and entropy values */
|
236
|
+
|
237
|
+
ForEach(V1, 1, GEnv.Blocks)
|
238
|
+
{
|
239
|
+
GEnv.SubsetInfo[V1] = -GEnv.ValFreq[V1] * Log(GEnv.ValFreq[V1] / Cases);
|
240
|
+
GEnv.SubsetEntr[V1] = TotalInfo(GEnv.Freq[V1], 1, MaxClass);
|
241
|
+
}
|
242
|
+
|
243
|
+
ForEach(V1, First, GEnv.Blocks-1)
|
244
|
+
{
|
245
|
+
ForEach(V2, V1+1, GEnv.Blocks)
|
246
|
+
{
|
247
|
+
EvaluatePair(V1, V2, Cases);
|
248
|
+
}
|
249
|
+
}
|
250
|
+
|
251
|
+
/* Examine possible pair mergers and hill-climb */
|
252
|
+
|
253
|
+
while ( GEnv.Blocks > 2 )
|
254
|
+
{
|
255
|
+
BestV1 = 0;
|
256
|
+
BestGain = -Epsilon;
|
257
|
+
|
258
|
+
/* For each possible pair of values, calculate the gain and
|
259
|
+
total info of a split in which they are treated as one.
|
260
|
+
Keep track of the pair with the best gain. */
|
261
|
+
|
262
|
+
ForEach(V1, First, GEnv.Blocks-1)
|
263
|
+
{
|
264
|
+
ForEach(V2, V1+1, GEnv.Blocks)
|
265
|
+
{
|
266
|
+
if ( GEnv.ReasonableSubsets == 2 &&
|
267
|
+
GEnv.ValFreq[V1] >= MINITEMS-Epsilon &&
|
268
|
+
GEnv.ValFreq[V2] >= MINITEMS-Epsilon )
|
269
|
+
{
|
270
|
+
continue;
|
271
|
+
}
|
272
|
+
|
273
|
+
ThisGain = PrevGain -
|
274
|
+
((1-UnknownRate) / KnownCases) *
|
275
|
+
(GEnv.MergeEntr[V1][V2] -
|
276
|
+
(GEnv.SubsetEntr[V1] + GEnv.SubsetEntr[V2]));
|
277
|
+
ThisInfo = PrevInfo + (GEnv.MergeInfo[V1][V2] -
|
278
|
+
(GEnv.SubsetInfo[V1] + GEnv.SubsetInfo[V2])) / Cases;
|
279
|
+
Verbosity(3,
|
280
|
+
fprintf(Of, "\t combine %d %d info %.3f gain %.3f\n",
|
281
|
+
V1, V2, ThisInfo, ThisGain))
|
282
|
+
|
283
|
+
/* See whether this merge has the best gain so far */
|
284
|
+
|
285
|
+
if ( ThisGain > BestGain+Epsilon )
|
286
|
+
{
|
287
|
+
BestGain = ThisGain;
|
288
|
+
BestInfo = ThisInfo;
|
289
|
+
BestV1 = V1;
|
290
|
+
BestV2 = V2;
|
291
|
+
}
|
292
|
+
}
|
293
|
+
}
|
294
|
+
|
295
|
+
if ( ! BestV1 ) break;
|
296
|
+
|
297
|
+
PrevGain = BestGain;
|
298
|
+
PrevInfo = BestInfo;
|
299
|
+
|
300
|
+
/* Determine penalty as log of Bell number. If number is too
|
301
|
+
large, use an approximation of log */
|
302
|
+
|
303
|
+
Penalty = ( finite(Bell[InitialBlocks][GEnv.Blocks-1]) ?
|
304
|
+
Log(Bell[InitialBlocks][GEnv.Blocks-1]) :
|
305
|
+
(InitialBlocks-GEnv.Blocks+1) * Log(GEnv.Blocks-1) );
|
306
|
+
|
307
|
+
Val = (BestGain - Penalty / Cases) / BestInfo;
|
308
|
+
|
309
|
+
Merge(BestV1, BestV2, Cases);
|
310
|
+
|
311
|
+
Verbosity(2,
|
312
|
+
fprintf(Of, "\tform subset ");
|
313
|
+
PrintSubset(Att, GEnv.WSubset[BestV1]);
|
314
|
+
fprintf(Of, ": %d subsets, inf %.3f, gain %.3f, val %.3f%s\n",
|
315
|
+
GEnv.Blocks, BestInfo, BestGain, Val,
|
316
|
+
( Val > BestVal ? " **" : "" ));
|
317
|
+
Verbosity(3,
|
318
|
+
PrintDistribution(Att, 0, GEnv.Blocks, GEnv.Freq, GEnv.ValFreq,
|
319
|
+
false))
|
320
|
+
)
|
321
|
+
|
322
|
+
if ( Val >= BestVal )
|
323
|
+
{
|
324
|
+
Subsets[Att] = GEnv.Blocks;
|
325
|
+
|
326
|
+
ForEach(V1, 1, GEnv.Blocks)
|
327
|
+
{
|
328
|
+
CopyBits(GEnv.Bytes, GEnv.WSubset[V1], Subset[Att][V1]);
|
329
|
+
}
|
330
|
+
|
331
|
+
Info[Att] = BestInfo;
|
332
|
+
Gain[Att] = BestGain - Penalty / KnownCases;
|
333
|
+
BestVal = Val;
|
334
|
+
}
|
335
|
+
}
|
336
|
+
|
337
|
+
/* Add missing values as another branch */
|
338
|
+
|
339
|
+
if ( MissingValues )
|
340
|
+
{
|
341
|
+
Subsets[Att]++;
|
342
|
+
CopyBits(GEnv.Bytes, Subset[Att][0], Subset[Att][Subsets[Att]]);
|
343
|
+
}
|
344
|
+
|
345
|
+
Verbosity(2,
|
346
|
+
fprintf(Of, "\tfinal inf %.3f, gain %.3f, val=%.3f\n",
|
347
|
+
Info[Att], Gain[Att], Gain[Att] / (Info[Att] + 1E-3)))
|
348
|
+
}
|
349
|
+
|
350
|
+
|
351
|
+
|
352
|
+
/*************************************************************************/
|
353
|
+
/* */
|
354
|
+
/* Combine the distribution figures of subsets x and y. */
|
355
|
+
/* Update Freq, ValFreq, SubsetInfo, SubsetEntr, MergeInfo, and */
|
356
|
+
/* MergeEntr. */
|
357
|
+
/* */
|
358
|
+
/*************************************************************************/
|
359
|
+
|
360
|
+
|
361
|
+
void Merge(DiscrValue x, DiscrValue y, CaseCount Cases)
|
362
|
+
/* ----- */
|
363
|
+
{
|
364
|
+
ClassNo c;
|
365
|
+
double Entr=0;
|
366
|
+
CaseCount KnownCases=0;
|
367
|
+
int R, C;
|
368
|
+
|
369
|
+
AddBlock(x, y);
|
370
|
+
|
371
|
+
ForEach(c, 1, MaxClass)
|
372
|
+
{
|
373
|
+
Entr -= GEnv.Freq[x][c] * Log(GEnv.Freq[x][c]);
|
374
|
+
KnownCases += GEnv.Freq[x][c];
|
375
|
+
}
|
376
|
+
|
377
|
+
GEnv.SubsetInfo[x] = - GEnv.ValFreq[x] * Log(GEnv.ValFreq[x] / Cases);
|
378
|
+
GEnv.SubsetEntr[x] = Entr + KnownCases * Log(KnownCases);
|
379
|
+
|
380
|
+
/* Eliminate y from working blocks */
|
381
|
+
|
382
|
+
ForEach(R, y, GEnv.Blocks-1)
|
383
|
+
{
|
384
|
+
MoveBlock(R, R+1);
|
385
|
+
|
386
|
+
GEnv.SubsetInfo[R] = GEnv.SubsetInfo[R+1];
|
387
|
+
GEnv.SubsetEntr[R] = GEnv.SubsetEntr[R+1];
|
388
|
+
|
389
|
+
ForEach(C, 1, GEnv.Blocks)
|
390
|
+
{
|
391
|
+
GEnv.MergeInfo[R][C] = GEnv.MergeInfo[R+1][C];
|
392
|
+
GEnv.MergeEntr[R][C] = GEnv.MergeEntr[R+1][C];
|
393
|
+
}
|
394
|
+
}
|
395
|
+
|
396
|
+
ForEach(C, y, GEnv.Blocks-1)
|
397
|
+
{
|
398
|
+
ForEach(R, 1, GEnv.Blocks-1)
|
399
|
+
{
|
400
|
+
GEnv.MergeInfo[R][C] = GEnv.MergeInfo[R][C+1];
|
401
|
+
GEnv.MergeEntr[R][C] = GEnv.MergeEntr[R][C+1];
|
402
|
+
}
|
403
|
+
}
|
404
|
+
GEnv.Blocks--;
|
405
|
+
|
406
|
+
/* Update information for newly-merged block */
|
407
|
+
|
408
|
+
ForEach(C, 1, GEnv.Blocks)
|
409
|
+
{
|
410
|
+
if ( C != x ) EvaluatePair(x, C, Cases);
|
411
|
+
}
|
412
|
+
}
|
413
|
+
|
414
|
+
|
415
|
+
|
416
|
+
/*************************************************************************/
|
417
|
+
/* */
|
418
|
+
/* Calculate the effect of merging subsets x and y */
|
419
|
+
/* */
|
420
|
+
/*************************************************************************/
|
421
|
+
|
422
|
+
|
423
|
+
void EvaluatePair(DiscrValue x, DiscrValue y, CaseCount Cases)
|
424
|
+
/* ------------ */
|
425
|
+
{
|
426
|
+
ClassNo c;
|
427
|
+
double Entr=0;
|
428
|
+
CaseCount KnownCases=0, F;
|
429
|
+
|
430
|
+
if ( y < x )
|
431
|
+
{
|
432
|
+
c = y;
|
433
|
+
y = x;
|
434
|
+
x = c;
|
435
|
+
}
|
436
|
+
|
437
|
+
F = GEnv.ValFreq[x] + GEnv.ValFreq[y];
|
438
|
+
GEnv.MergeInfo[x][y] = - F * Log(F / Cases);
|
439
|
+
|
440
|
+
ForEach(c, 1, MaxClass)
|
441
|
+
{
|
442
|
+
F = GEnv.Freq[x][c] + GEnv.Freq[y][c];
|
443
|
+
Entr -= F * Log(F);
|
444
|
+
KnownCases += F;
|
445
|
+
}
|
446
|
+
GEnv.MergeEntr[x][y] = Entr + KnownCases * Log(KnownCases);
|
447
|
+
}
|
448
|
+
|
449
|
+
|
450
|
+
|
451
|
+
/*************************************************************************/
|
452
|
+
/* */
|
453
|
+
/* Check whether two values have same class distribution */
|
454
|
+
/* */
|
455
|
+
/*************************************************************************/
|
456
|
+
|
457
|
+
|
458
|
+
Boolean SameDistribution(DiscrValue V1, DiscrValue V2)
|
459
|
+
/* ---------------- */
|
460
|
+
{
|
461
|
+
ClassNo c;
|
462
|
+
CaseCount D1, D2;
|
463
|
+
|
464
|
+
D1 = GEnv.ValFreq[V1];
|
465
|
+
D2 = GEnv.ValFreq[V2];
|
466
|
+
|
467
|
+
ForEach(c, 1, MaxClass)
|
468
|
+
{
|
469
|
+
if ( fabs(GEnv.Freq[V1][c] / D1 - GEnv.Freq[V2][c] / D2) > 0.001 )
|
470
|
+
{
|
471
|
+
return false;
|
472
|
+
}
|
473
|
+
}
|
474
|
+
|
475
|
+
return true;
|
476
|
+
}
|
477
|
+
|
478
|
+
|
479
|
+
|
480
|
+
/*************************************************************************/
|
481
|
+
/* */
|
482
|
+
/* Add frequency and subset information from block V2 to V1 */
|
483
|
+
/* */
|
484
|
+
/*************************************************************************/
|
485
|
+
|
486
|
+
|
487
|
+
void AddBlock(DiscrValue V1, DiscrValue V2)
|
488
|
+
/* -------- */
|
489
|
+
{
|
490
|
+
ClassNo c;
|
491
|
+
int b;
|
492
|
+
|
493
|
+
if ( GEnv.ValFreq[V1] >= MINITEMS-Epsilon &&
|
494
|
+
GEnv.ValFreq[V2] >= MINITEMS-Epsilon )
|
495
|
+
{
|
496
|
+
GEnv.ReasonableSubsets--;
|
497
|
+
}
|
498
|
+
else
|
499
|
+
if ( GEnv.ValFreq[V1] < MINITEMS-Epsilon &&
|
500
|
+
GEnv.ValFreq[V2] < MINITEMS-Epsilon &&
|
501
|
+
GEnv.ValFreq[V1] + GEnv.ValFreq[V2] >= MINITEMS-Epsilon )
|
502
|
+
{
|
503
|
+
GEnv.ReasonableSubsets++;
|
504
|
+
}
|
505
|
+
|
506
|
+
ForEach(c, 1, MaxClass)
|
507
|
+
{
|
508
|
+
GEnv.Freq[V1][c] += GEnv.Freq[V2][c];
|
509
|
+
}
|
510
|
+
GEnv.ValFreq[V1] += GEnv.ValFreq[V2];
|
511
|
+
GEnv.ValFreq[V2] = 0;
|
512
|
+
ForEach(b, 0, GEnv.Bytes-1)
|
513
|
+
{
|
514
|
+
GEnv.WSubset[V1][b] |= GEnv.WSubset[V2][b];
|
515
|
+
}
|
516
|
+
}
|
517
|
+
|
518
|
+
|
519
|
+
|
520
|
+
/*************************************************************************/
|
521
|
+
/* */
|
522
|
+
/* Move frequency and subset information from block V2 to V1 */
|
523
|
+
/* */
|
524
|
+
/*************************************************************************/
|
525
|
+
|
526
|
+
|
527
|
+
void MoveBlock(DiscrValue V1, DiscrValue V2)
|
528
|
+
/* --------- */
|
529
|
+
{
|
530
|
+
ClassNo c;
|
531
|
+
|
532
|
+
ForEach(c, 1, MaxClass)
|
533
|
+
{
|
534
|
+
GEnv.Freq[V1][c] = GEnv.Freq[V2][c];
|
535
|
+
}
|
536
|
+
GEnv.ValFreq[V1] = GEnv.ValFreq[V2];
|
537
|
+
CopyBits(GEnv.Bytes, GEnv.WSubset[V2], GEnv.WSubset[V1]);
|
538
|
+
}
|
539
|
+
|
540
|
+
|
541
|
+
|
542
|
+
/*************************************************************************/
|
543
|
+
/* */
|
544
|
+
/* Print the values of attribute Att which are in the subset Ss */
|
545
|
+
/* */
|
546
|
+
/*************************************************************************/
|
547
|
+
|
548
|
+
|
549
|
+
void PrintSubset(Attribute Att, Set Ss)
|
550
|
+
/* ----------- */
|
551
|
+
{
|
552
|
+
DiscrValue V1;
|
553
|
+
Boolean First=true;
|
554
|
+
|
555
|
+
ForEach(V1, 1, MaxAttVal[Att])
|
556
|
+
{
|
557
|
+
if ( In(V1, Ss) )
|
558
|
+
{
|
559
|
+
if ( First )
|
560
|
+
{
|
561
|
+
First = false;
|
562
|
+
}
|
563
|
+
else
|
564
|
+
{
|
565
|
+
fprintf(Of, ", ");
|
566
|
+
}
|
567
|
+
|
568
|
+
fprintf(Of, "%s", AttValName[Att][V1]);
|
569
|
+
}
|
570
|
+
}
|
571
|
+
}
|
572
|
+
|
573
|
+
|
574
|
+
|
575
|
+
/*************************************************************************/
|
576
|
+
/* */
|
577
|
+
/* Construct and return a node for a test on a subset of values */
|
578
|
+
/* */
|
579
|
+
/*************************************************************************/
|
580
|
+
|
581
|
+
|
582
|
+
void SubsetTest(Tree Node, Attribute Att)
|
583
|
+
/* ----------- */
|
584
|
+
{
|
585
|
+
int S, Bytes;
|
586
|
+
|
587
|
+
Sprout(Node, Subsets[Att]);
|
588
|
+
|
589
|
+
Node->NodeType = BrSubset;
|
590
|
+
Node->Tested = Att;
|
591
|
+
|
592
|
+
Bytes = (MaxAttVal[Att]>>3) + 1;
|
593
|
+
Node->Subset = AllocZero(Subsets[Att]+1, Set);
|
594
|
+
ForEach(S, 1, Node->Forks)
|
595
|
+
{
|
596
|
+
Node->Subset[S] = Alloc(Bytes, Byte);
|
597
|
+
CopyBits(Bytes, Subset[Att][S], Node->Subset[S]);
|
598
|
+
}
|
599
|
+
}
|