see5-installer 0.1.0
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- checksums.yaml +7 -0
- data/.gitignore +8 -0
- data/.rubocop.yml +11 -0
- data/CHANGELOG.md +5 -0
- data/Gemfile +10 -0
- data/README.md +29 -0
- data/Rakefile +12 -0
- data/ext/c5.0/Makefile +86 -0
- data/ext/c5.0/attwinnow.c +394 -0
- data/ext/c5.0/c50.c +330 -0
- data/ext/c5.0/classify.c +700 -0
- data/ext/c5.0/confmat.c +195 -0
- data/ext/c5.0/construct.c +853 -0
- data/ext/c5.0/contin.c +613 -0
- data/ext/c5.0/defns.i +788 -0
- data/ext/c5.0/discr.c +307 -0
- data/ext/c5.0/extern.i +170 -0
- data/ext/c5.0/formrules.c +720 -0
- data/ext/c5.0/formtree.c +1158 -0
- data/ext/c5.0/getdata.c +521 -0
- data/ext/c5.0/getnames.c +733 -0
- data/ext/c5.0/global.c +211 -0
- data/ext/c5.0/gpl.txt +674 -0
- data/ext/c5.0/implicitatt.c +1112 -0
- data/ext/c5.0/info.c +146 -0
- data/ext/c5.0/mcost.c +138 -0
- data/ext/c5.0/modelfiles.c +952 -0
- data/ext/c5.0/p-thresh.c +313 -0
- data/ext/c5.0/prune.c +1069 -0
- data/ext/c5.0/report.c +345 -0
- data/ext/c5.0/rules.c +579 -0
- data/ext/c5.0/ruletree.c +398 -0
- data/ext/c5.0/siftrules.c +1285 -0
- data/ext/c5.0/sort.c +156 -0
- data/ext/c5.0/subset.c +599 -0
- data/ext/c5.0/text.i +223 -0
- data/ext/c5.0/trees.c +740 -0
- data/ext/c5.0/update.c +129 -0
- data/ext/c5.0/utility.c +1146 -0
- data/ext/c5.0/xval +150 -0
- data/ext/c5.0/xval.c +402 -0
- data/ext/gritbot/Makefile +98 -0
- data/ext/gritbot/check.c +1110 -0
- data/ext/gritbot/cluster.c +342 -0
- data/ext/gritbot/common.c +1269 -0
- data/ext/gritbot/continatt.c +412 -0
- data/ext/gritbot/defns.i +623 -0
- data/ext/gritbot/discratt.c +459 -0
- data/ext/gritbot/extern.i +101 -0
- data/ext/gritbot/getdata.c +329 -0
- data/ext/gritbot/getnames.c +573 -0
- data/ext/gritbot/global.c +104 -0
- data/ext/gritbot/gpl.txt +674 -0
- data/ext/gritbot/gritbot.c +295 -0
- data/ext/gritbot/implicitatt.c +1108 -0
- data/ext/gritbot/inspect.c +794 -0
- data/ext/gritbot/modelfiles.c +687 -0
- data/ext/gritbot/outlier.c +415 -0
- data/ext/gritbot/sort.c +130 -0
- data/ext/gritbot/text.i +159 -0
- data/ext/gritbot/update.c +126 -0
- data/ext/gritbot/utility.c +1029 -0
- data/ext/see5-installer/extconf.rb +25 -0
- data/lib/see5/installer.rb +10 -0
- data/lib/see5/installer/version.rb +7 -0
- data/see5-installer.gemspec +30 -0
- metadata +115 -0
data/ext/c5.0/info.c
ADDED
@@ -0,0 +1,146 @@
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/*************************************************************************/
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/* */
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/* Copyright 2010 Rulequest Research Pty Ltd. */
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/* */
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/* This file is part of C5.0 GPL Edition, a single-threaded version */
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/* of C5.0 release 2.07. */
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/* */
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/* C5.0 GPL Edition is free software: you can redistribute it and/or */
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/* modify it under the terms of the GNU General Public License as */
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/* published by the Free Software Foundation, either version 3 of the */
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/* License, or (at your option) any later version. */
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/* */
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/* C5.0 GPL Edition is distributed in the hope that it will be useful, */
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/* but WITHOUT ANY WARRANTY; without even the implied warranty of */
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/* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU */
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/* General Public License for more details. */
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/* */
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/* You should have received a copy of the GNU General Public License */
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/* (gpl.txt) along with C5.0 GPL Edition. If not, see */
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/* */
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/* <http://www.gnu.org/licenses/>. */
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/* */
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/*************************************************************************/
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/*************************************************************************/
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/* */
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/* Calculate information, information gain, and print dists */
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/* -------------------------------------------------------- */
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/* */
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/*************************************************************************/
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#include "defns.i"
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#include "extern.i"
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/*************************************************************************/
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/* */
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/* Given Freq[][] and ValFreq[], compute the information gain. */
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/* */
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/*************************************************************************/
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double ComputeGain(double BaseInfo, float UnknFrac, DiscrValue MaxVal,
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CaseCount TotalCases)
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/* ----------- */
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{
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DiscrValue v;
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double ThisInfo=0.0;
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/* Check whether all values are unknown or the same */
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if ( ! TotalCases ) return None;
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/* Compute total info after split, by summing the
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info of each of the subsets formed by the test */
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ForEach(v, 1, MaxVal)
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{
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ThisInfo += TotalInfo(GEnv.Freq[v], 1, MaxClass);
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}
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ThisInfo /= TotalCases;
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/* Set the gain in information for all cases, adjusted for unknowns */
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return ( BaseInfo <= ThisInfo ? 0.0 :
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(1 - UnknFrac) * (BaseInfo - ThisInfo) );
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}
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/*************************************************************************/
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/* */
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/* Compute the total information in V[ MinVal..MaxVal ] */
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/* */
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/*************************************************************************/
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double TotalInfo(double V[], DiscrValue MinVal, DiscrValue MaxVal)
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/* --------- */
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{
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DiscrValue v;
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double Sum=0.0, TotalCases=0;
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CaseCount N;
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ForEach(v, MinVal, MaxVal)
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{
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N = V[v];
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Sum += N * Log(N);
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TotalCases += N;
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}
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return TotalCases * Log(TotalCases) - Sum;
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}
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/*************************************************************************/
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/* */
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/* Print distribution table for given attribute */
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/* */
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/*************************************************************************/
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void PrintDistribution(Attribute Att, DiscrValue MinVal, DiscrValue MaxVal,
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double **Freq, double *ValFreq, Boolean ShowNames)
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/* ----------------- */
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{
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DiscrValue v;
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ClassNo c;
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String Val;
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fprintf(Of, "\n\t\t\t ");
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ForEach(c, 1, MaxClass)
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{
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fprintf(Of, "%7.6s", ClassName[c]);
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}
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fprintf(Of, "\n");
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ForEach(v, MinVal, MaxVal)
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{
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if ( ShowNames )
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{
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Val = ( ! v ? "unknown" :
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MaxAttVal[Att] ? AttValName[Att][v] :
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v == 1 ? "N/A" :
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v == 2 ? "below" : "above" );
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fprintf(Of, "\t\t[%-7.7s:", Val);
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}
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else
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{
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fprintf(Of, "\t\t[%-7d:", v);
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}
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ForEach(c, 1, MaxClass)
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{
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fprintf(Of, " %6.1f", Freq[v][c]);
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}
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144
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fprintf(Of, "]\n");
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}
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}
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data/ext/c5.0/mcost.c
ADDED
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/*************************************************************************/
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/* */
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/* Copyright 2010 Rulequest Research Pty Ltd. */
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/* */
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5
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/* This file is part of C5.0 GPL Edition, a single-threaded version */
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6
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/* of C5.0 release 2.07. */
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7
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/* */
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8
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/* C5.0 GPL Edition is free software: you can redistribute it and/or */
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9
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/* modify it under the terms of the GNU General Public License as */
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10
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/* published by the Free Software Foundation, either version 3 of the */
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/* License, or (at your option) any later version. */
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/* */
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/* C5.0 GPL Edition is distributed in the hope that it will be useful, */
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14
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/* but WITHOUT ANY WARRANTY; without even the implied warranty of */
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15
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/* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU */
|
16
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/* General Public License for more details. */
|
17
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+
/* */
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18
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/* You should have received a copy of the GNU General Public License */
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19
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/* (gpl.txt) along with C5.0 GPL Edition. If not, see */
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/* */
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/* <http://www.gnu.org/licenses/>. */
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/* */
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/*************************************************************************/
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/*************************************************************************/
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/* */
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29
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/* Read variable misclassification costs */
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/* ------------------------------------- */
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/* */
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/*************************************************************************/
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#include "defns.i"
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#include "extern.i"
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void GetMCosts(FILE *Cf)
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/* --------- */
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{
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ClassNo Pred, Real, p, r;
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43
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char Name[1000];
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CaseNo i;
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float Val, Sum=0;
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LineNo = 0;
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48
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/* Read entries from cost file */
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50
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while ( ReadName(Cf, Name, 1000, ':') )
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{
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if ( ! (Pred = Which(Name, ClassName, 1, MaxClass)) )
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{
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Error(BADCOSTCLASS, Name, "");
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}
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if ( ! ReadName(Cf, Name, 1000, ':') ||
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! (Real = Which(Name, ClassName, 1, MaxClass)) )
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{
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Error(BADCOSTCLASS, Name, "");
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}
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if ( ! ReadName(Cf, Name, 1000, ':') ||
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sscanf(Name, "%f", &Val) != 1 || Val < 0 )
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{
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Error(BADCOST, "", "");
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Val = 1;
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}
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70
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if ( Pred > 0 && Real > 0 && Pred != Real && Val != 1 )
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{
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73
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/* Have a non-trivial cost entry */
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if ( ! MCost )
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{
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/* Set up cost matrices */
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MCost = Alloc(MaxClass+1, float *);
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ForEach(p, 1, MaxClass)
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{
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MCost[p] = Alloc(MaxClass+1, float);
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ForEach(r, 1, MaxClass)
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{
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85
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MCost[p][r] = ( p == r ? 0.0 : 1.0 );
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}
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}
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}
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MCost[Pred][Real] = Val;
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}
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}
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fclose(Cf);
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/* Don't need weights etc. for predict or interpret, or
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if not using cost weighting */
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|
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if ( ! (CostWeights = MaxClass == 2 && MaxCase >= 0 && MCost) )
|
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{
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return;
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101
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}
|
102
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|
103
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/* Determine class frequency distribution */
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104
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|
105
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ClassFreq = AllocZero(MaxClass+1, double);
|
106
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+
|
107
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if ( CWtAtt )
|
108
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{
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109
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AvCWt = 1; /* relative weights not yet set */
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110
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ForEach(i, 0, MaxCase)
|
111
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{
|
112
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ClassFreq[Class(Case[i])] += RelCWt(Case[i]);
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}
|
114
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}
|
115
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else
|
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{
|
117
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ForEach(i, 0, MaxCase)
|
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{
|
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ClassFreq[Class(Case[i])]++;
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}
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}
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122
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+
|
123
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/* Find normalised weight multipliers */
|
124
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|
125
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WeightMul = Alloc(3, float);
|
126
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+
|
127
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Sum = (ClassFreq[1] * MCost[2][1] + ClassFreq[2] * MCost[1][2]) /
|
128
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(ClassFreq[1] + ClassFreq[2]);
|
129
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+
|
130
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+
WeightMul[1] = MCost[2][1] / Sum;
|
131
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+
WeightMul[2] = MCost[1][2] / Sum;
|
132
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+
|
133
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/* Adjust MINITEMS to take account of case reweighting */
|
134
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+
|
135
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MINITEMS *= Min(WeightMul[1], WeightMul[2]);
|
136
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|
137
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Free(ClassFreq); ClassFreq = Nil;
|
138
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}
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@@ -0,0 +1,952 @@
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1
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/*************************************************************************/
|
2
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+
/* */
|
3
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+
/* Copyright 2010 Rulequest Research Pty Ltd. */
|
4
|
+
/* */
|
5
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+
/* This file is part of C5.0 GPL Edition, a single-threaded version */
|
6
|
+
/* of C5.0 release 2.07. */
|
7
|
+
/* */
|
8
|
+
/* C5.0 GPL Edition is free software: you can redistribute it and/or */
|
9
|
+
/* modify it under the terms of the GNU General Public License as */
|
10
|
+
/* published by the Free Software Foundation, either version 3 of the */
|
11
|
+
/* License, or (at your option) any later version. */
|
12
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+
/* */
|
13
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+
/* C5.0 GPL Edition is distributed in the hope that it will be useful, */
|
14
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+
/* but WITHOUT ANY WARRANTY; without even the implied warranty of */
|
15
|
+
/* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU */
|
16
|
+
/* General Public License for more details. */
|
17
|
+
/* */
|
18
|
+
/* You should have received a copy of the GNU General Public License */
|
19
|
+
/* (gpl.txt) along with C5.0 GPL Edition. If not, see */
|
20
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+
/* */
|
21
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/* <http://www.gnu.org/licenses/>. */
|
22
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+
/* */
|
23
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+
/*************************************************************************/
|
24
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+
|
25
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+
|
26
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+
|
27
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/*************************************************************************/
|
28
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/* */
|
29
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/* Routines for saving and reading model files */
|
30
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/* ------------------------------------------- */
|
31
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/* */
|
32
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/*************************************************************************/
|
33
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+
|
34
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|
35
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#include "defns.i"
|
36
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#include "extern.i"
|
37
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+
|
38
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+
int Entry;
|
39
|
+
|
40
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+
char* Prop[]={"null",
|
41
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+
"att",
|
42
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+
"class",
|
43
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+
"cut",
|
44
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+
"conds",
|
45
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+
"elts",
|
46
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+
"entries",
|
47
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+
"forks",
|
48
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+
"freq",
|
49
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+
"id",
|
50
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+
"type",
|
51
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+
"low",
|
52
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+
"mid",
|
53
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+
"high",
|
54
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+
"result",
|
55
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+
"rules",
|
56
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+
"val",
|
57
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+
"lift",
|
58
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+
"cover",
|
59
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+
"ok",
|
60
|
+
"default",
|
61
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+
"costs",
|
62
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+
"sample",
|
63
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+
"init"
|
64
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+
};
|
65
|
+
|
66
|
+
char PropName[20],
|
67
|
+
*PropVal=Nil,
|
68
|
+
*Unquoted;
|
69
|
+
int PropValSize=0;
|
70
|
+
|
71
|
+
#define PROPS 23
|
72
|
+
|
73
|
+
#define ERRORP 0
|
74
|
+
#define ATTP 1
|
75
|
+
#define CLASSP 2
|
76
|
+
#define CUTP 3
|
77
|
+
#define CONDSP 4
|
78
|
+
#define ELTSP 5
|
79
|
+
#define ENTRIESP 6
|
80
|
+
#define FORKSP 7
|
81
|
+
#define FREQP 8
|
82
|
+
#define IDP 9
|
83
|
+
#define TYPEP 10
|
84
|
+
#define LOWP 11
|
85
|
+
#define MIDP 12
|
86
|
+
#define HIGHP 13
|
87
|
+
#define RESULTP 14
|
88
|
+
#define RULESP 15
|
89
|
+
#define VALP 16
|
90
|
+
#define LIFTP 17
|
91
|
+
#define COVERP 18
|
92
|
+
#define OKP 19
|
93
|
+
#define DEFAULTP 20
|
94
|
+
#define COSTSP 21
|
95
|
+
#define SAMPLEP 22
|
96
|
+
#define INITP 23
|
97
|
+
|
98
|
+
|
99
|
+
/*************************************************************************/
|
100
|
+
/* */
|
101
|
+
/* Check whether file is open. If it is not, open it and */
|
102
|
+
/* read/write sampling information and discrete names */
|
103
|
+
/* */
|
104
|
+
/*************************************************************************/
|
105
|
+
|
106
|
+
|
107
|
+
void CheckFile(String Extension, Boolean Write)
|
108
|
+
/* --------- */
|
109
|
+
{
|
110
|
+
static char *LastExt="";
|
111
|
+
|
112
|
+
if ( ! TRf || strcmp(LastExt, Extension) )
|
113
|
+
{
|
114
|
+
LastExt = Extension;
|
115
|
+
|
116
|
+
if ( TRf )
|
117
|
+
{
|
118
|
+
fprintf(TRf, "\n");
|
119
|
+
fclose(TRf);
|
120
|
+
}
|
121
|
+
|
122
|
+
if ( Write )
|
123
|
+
{
|
124
|
+
WriteFilePrefix(Extension);
|
125
|
+
}
|
126
|
+
else
|
127
|
+
{
|
128
|
+
ReadFilePrefix(Extension);
|
129
|
+
}
|
130
|
+
}
|
131
|
+
}
|
132
|
+
|
133
|
+
|
134
|
+
|
135
|
+
/*************************************************************************/
|
136
|
+
/* */
|
137
|
+
/* Write information on system, sampling */
|
138
|
+
/* */
|
139
|
+
/*************************************************************************/
|
140
|
+
|
141
|
+
|
142
|
+
void WriteFilePrefix(String Extension)
|
143
|
+
/* --------------- */
|
144
|
+
{
|
145
|
+
time_t clock;
|
146
|
+
struct tm *now;
|
147
|
+
|
148
|
+
if ( ! (TRf = GetFile(Extension, "w")) )
|
149
|
+
{
|
150
|
+
Error(NOFILE, Fn, E_ForWrite);
|
151
|
+
}
|
152
|
+
|
153
|
+
clock = time(0);
|
154
|
+
now = localtime(&clock);
|
155
|
+
now->tm_mon++;
|
156
|
+
fprintf(TRf, "id=\"See5/C5.0 %s %d-%d%d-%d%d\"\n",
|
157
|
+
RELEASE,
|
158
|
+
now->tm_year + 1900,
|
159
|
+
now->tm_mon / 10, now->tm_mon % 10,
|
160
|
+
now->tm_mday / 10, now->tm_mday % 10);
|
161
|
+
|
162
|
+
if ( MCost )
|
163
|
+
{
|
164
|
+
fprintf(TRf, "costs=\"1\"\n");
|
165
|
+
}
|
166
|
+
|
167
|
+
if ( SAMPLE > 0 )
|
168
|
+
{
|
169
|
+
fprintf(TRf, "sample=\"%g\" init=\"%d\"\n", SAMPLE, KRInit);
|
170
|
+
}
|
171
|
+
|
172
|
+
SaveDiscreteNames();
|
173
|
+
|
174
|
+
fprintf(TRf, "entries=\"%d\"\n", TRIALS);
|
175
|
+
}
|
176
|
+
|
177
|
+
|
178
|
+
|
179
|
+
/*************************************************************************/
|
180
|
+
/* */
|
181
|
+
/* Read header information */
|
182
|
+
/* */
|
183
|
+
/*************************************************************************/
|
184
|
+
|
185
|
+
|
186
|
+
void ReadFilePrefix(String Extension)
|
187
|
+
/* -------------- */
|
188
|
+
{
|
189
|
+
if ( ! (TRf = GetFile(Extension, "r")) ) Error(NOFILE, Fn, "");
|
190
|
+
|
191
|
+
StreamIn((char *) &TRIALS, sizeof(int));
|
192
|
+
if ( memcmp((char *) &TRIALS, "id=", 3) != 0 )
|
193
|
+
{
|
194
|
+
printf("\nCannot read old format classifiers\n");
|
195
|
+
exit(1);
|
196
|
+
}
|
197
|
+
else
|
198
|
+
{
|
199
|
+
rewind(TRf);
|
200
|
+
ReadHeader();
|
201
|
+
}
|
202
|
+
}
|
203
|
+
|
204
|
+
|
205
|
+
|
206
|
+
/*************************************************************************/
|
207
|
+
/* */
|
208
|
+
/* Save attribute values read with "discrete N" */
|
209
|
+
/* */
|
210
|
+
/*************************************************************************/
|
211
|
+
|
212
|
+
|
213
|
+
void SaveDiscreteNames()
|
214
|
+
/* ----------------- */
|
215
|
+
{
|
216
|
+
Attribute Att;
|
217
|
+
DiscrValue v;
|
218
|
+
|
219
|
+
ForEach(Att, 1, MaxAtt)
|
220
|
+
{
|
221
|
+
if ( ! StatBit(Att, DISCRETE) || MaxAttVal[Att] < 2 ) continue;
|
222
|
+
|
223
|
+
AsciiOut("att=", AttName[Att]);
|
224
|
+
AsciiOut(" elts=", AttValName[Att][2]); /* skip N/A */
|
225
|
+
|
226
|
+
ForEach(v, 3, MaxAttVal[Att])
|
227
|
+
{
|
228
|
+
AsciiOut(",", AttValName[Att][v]);
|
229
|
+
}
|
230
|
+
fprintf(TRf, "\n");
|
231
|
+
}
|
232
|
+
}
|
233
|
+
|
234
|
+
|
235
|
+
|
236
|
+
/*************************************************************************/
|
237
|
+
/* */
|
238
|
+
/* Save entire decision tree T in file with extension Extension */
|
239
|
+
/* */
|
240
|
+
/*************************************************************************/
|
241
|
+
|
242
|
+
|
243
|
+
void SaveTree(Tree T, String Extension)
|
244
|
+
/* -------- */
|
245
|
+
{
|
246
|
+
CheckFile(Extension, true);
|
247
|
+
|
248
|
+
OutTree(T);
|
249
|
+
}
|
250
|
+
|
251
|
+
|
252
|
+
|
253
|
+
void OutTree(Tree T)
|
254
|
+
/* ------- */
|
255
|
+
{
|
256
|
+
DiscrValue v, vv;
|
257
|
+
ClassNo c;
|
258
|
+
Boolean First;
|
259
|
+
|
260
|
+
fprintf(TRf, "type=\"%d\"", T->NodeType);
|
261
|
+
AsciiOut(" class=", ClassName[T->Leaf]);
|
262
|
+
if ( T->Cases > 0 )
|
263
|
+
{
|
264
|
+
fprintf(TRf, " freq=\"%g", T->ClassDist[1]);
|
265
|
+
ForEach(c, 2, MaxClass)
|
266
|
+
{
|
267
|
+
fprintf(TRf, ",%g", T->ClassDist[c]);
|
268
|
+
}
|
269
|
+
fprintf(TRf, "\"");
|
270
|
+
}
|
271
|
+
|
272
|
+
if ( T->NodeType )
|
273
|
+
{
|
274
|
+
AsciiOut(" att=", AttName[T->Tested]);
|
275
|
+
fprintf(TRf, " forks=\"%d\"", T->Forks);
|
276
|
+
|
277
|
+
switch ( T->NodeType )
|
278
|
+
{
|
279
|
+
case BrDiscr:
|
280
|
+
break;
|
281
|
+
|
282
|
+
case BrThresh:
|
283
|
+
fprintf(TRf, " cut=\"%.*g\"", PREC+1, T->Cut);
|
284
|
+
if ( T->Upper > T->Cut )
|
285
|
+
{
|
286
|
+
fprintf(TRf, " low=\"%.*g\" mid=\"%.*g\" high=\"%.*g\"",
|
287
|
+
PREC, T->Lower, PREC, T->Mid, PREC, T->Upper);
|
288
|
+
}
|
289
|
+
break;
|
290
|
+
|
291
|
+
case BrSubset:
|
292
|
+
ForEach(v, 1, T->Forks)
|
293
|
+
{
|
294
|
+
First=true;
|
295
|
+
ForEach(vv, 1, MaxAttVal[T->Tested])
|
296
|
+
{
|
297
|
+
if ( In(vv, T->Subset[v]) )
|
298
|
+
{
|
299
|
+
if ( First )
|
300
|
+
{
|
301
|
+
AsciiOut(" elts=", AttValName[T->Tested][vv]);
|
302
|
+
First = false;
|
303
|
+
}
|
304
|
+
else
|
305
|
+
{
|
306
|
+
AsciiOut(",", AttValName[T->Tested][vv]);
|
307
|
+
}
|
308
|
+
}
|
309
|
+
}
|
310
|
+
/* Make sure have printed at least one element */
|
311
|
+
|
312
|
+
if ( First ) AsciiOut(" elts=", "N/A");
|
313
|
+
}
|
314
|
+
break;
|
315
|
+
}
|
316
|
+
fprintf(TRf, "\n");
|
317
|
+
|
318
|
+
ForEach(v, 1, T->Forks)
|
319
|
+
{
|
320
|
+
OutTree(T->Branch[v]);
|
321
|
+
}
|
322
|
+
}
|
323
|
+
else
|
324
|
+
{
|
325
|
+
fprintf(TRf, "\n");
|
326
|
+
}
|
327
|
+
}
|
328
|
+
|
329
|
+
|
330
|
+
|
331
|
+
/*************************************************************************/
|
332
|
+
/* */
|
333
|
+
/* Save the current ruleset in rules file */
|
334
|
+
/* */
|
335
|
+
/*************************************************************************/
|
336
|
+
|
337
|
+
|
338
|
+
void SaveRules(CRuleSet RS, String Extension)
|
339
|
+
/* --------- */
|
340
|
+
{
|
341
|
+
int ri, d;
|
342
|
+
CRule R;
|
343
|
+
Condition C;
|
344
|
+
DiscrValue v;
|
345
|
+
Boolean First;
|
346
|
+
|
347
|
+
CheckFile(Extension, true);
|
348
|
+
|
349
|
+
fprintf(TRf, "rules=\"%d\"", RS->SNRules);
|
350
|
+
AsciiOut(" default=", ClassName[RS->SDefault]);
|
351
|
+
fprintf(TRf, "\n");
|
352
|
+
|
353
|
+
ForEach(ri, 1, RS->SNRules)
|
354
|
+
{
|
355
|
+
R = RS->SRule[ri];
|
356
|
+
fprintf(TRf, "conds=\"%d\" cover=\"%g\" ok=\"%g\" lift=\"%g\"",
|
357
|
+
R->Size, R->Cover, R->Correct,
|
358
|
+
(R->Correct + 1) / ((R->Cover + 2) * R->Prior));
|
359
|
+
AsciiOut(" class=", ClassName[R->Rhs]);
|
360
|
+
fprintf(TRf, "\n");
|
361
|
+
|
362
|
+
ForEach(d, 1, R->Size)
|
363
|
+
{
|
364
|
+
C = R->Lhs[d];
|
365
|
+
|
366
|
+
fprintf(TRf, "type=\"%d\"", C->NodeType);
|
367
|
+
AsciiOut(" att=", AttName[C->Tested]);
|
368
|
+
|
369
|
+
switch ( C->NodeType )
|
370
|
+
{
|
371
|
+
case BrDiscr:
|
372
|
+
AsciiOut(" val=", AttValName[C->Tested][C->TestValue]);
|
373
|
+
break;
|
374
|
+
|
375
|
+
case BrThresh:
|
376
|
+
if ( C->TestValue == 1 ) /* N/A */
|
377
|
+
{
|
378
|
+
fprintf(TRf, " val=\"N/A\"");
|
379
|
+
}
|
380
|
+
else
|
381
|
+
{
|
382
|
+
fprintf(TRf, " cut=\"%.*g\" result=\"%c\"",
|
383
|
+
PREC+1, C->Cut,
|
384
|
+
( C->TestValue == 2 ? '<' : '>' ));
|
385
|
+
}
|
386
|
+
break;
|
387
|
+
|
388
|
+
case BrSubset:
|
389
|
+
First=true;
|
390
|
+
ForEach(v, 1, MaxAttVal[C->Tested])
|
391
|
+
{
|
392
|
+
if ( In(v, C->Subset) )
|
393
|
+
{
|
394
|
+
if ( First )
|
395
|
+
{
|
396
|
+
AsciiOut(" elts=", AttValName[C->Tested][v]);
|
397
|
+
First = false;
|
398
|
+
}
|
399
|
+
else
|
400
|
+
{
|
401
|
+
AsciiOut(",", AttValName[C->Tested][v]);
|
402
|
+
}
|
403
|
+
}
|
404
|
+
}
|
405
|
+
break;
|
406
|
+
}
|
407
|
+
|
408
|
+
fprintf(TRf, "\n");
|
409
|
+
}
|
410
|
+
}
|
411
|
+
}
|
412
|
+
|
413
|
+
|
414
|
+
|
415
|
+
/*************************************************************************/
|
416
|
+
/* */
|
417
|
+
/* Write ASCII string with prefix, escaping any quotes */
|
418
|
+
/* */
|
419
|
+
/*************************************************************************/
|
420
|
+
|
421
|
+
|
422
|
+
void AsciiOut(String Pre, String S)
|
423
|
+
/* -------- */
|
424
|
+
{
|
425
|
+
fprintf(TRf, "%s\"", Pre);
|
426
|
+
while ( *S )
|
427
|
+
{
|
428
|
+
if ( *S == '"' || *S == '\\' ) fputc('\\', TRf);
|
429
|
+
fputc(*S++, TRf);
|
430
|
+
}
|
431
|
+
fputc('"', TRf);
|
432
|
+
}
|
433
|
+
|
434
|
+
|
435
|
+
|
436
|
+
/*************************************************************************/
|
437
|
+
/* */
|
438
|
+
/* Read the header information (id, saved names, models) */
|
439
|
+
/* */
|
440
|
+
/*************************************************************************/
|
441
|
+
|
442
|
+
|
443
|
+
void ReadHeader()
|
444
|
+
/* --------- */
|
445
|
+
{
|
446
|
+
Attribute Att;
|
447
|
+
DiscrValue v;
|
448
|
+
char *p, Dummy;
|
449
|
+
int Year, Month, Day;
|
450
|
+
FILE *F;
|
451
|
+
|
452
|
+
while ( true )
|
453
|
+
{
|
454
|
+
switch ( ReadProp(&Dummy) )
|
455
|
+
{
|
456
|
+
case ERRORP:
|
457
|
+
return;
|
458
|
+
|
459
|
+
case IDP:
|
460
|
+
/* Recover year run and set base date for timestamps */
|
461
|
+
|
462
|
+
if ( sscanf(PropVal + strlen(PropVal) - 11,
|
463
|
+
"%d-%d-%d\"", &Year, &Month, &Day) == 3 )
|
464
|
+
{
|
465
|
+
SetTSBase(Year);
|
466
|
+
}
|
467
|
+
break;
|
468
|
+
|
469
|
+
case COSTSP:
|
470
|
+
/* Recover costs file used to generate model */
|
471
|
+
|
472
|
+
if ( (F = GetFile(".costs", "r")) )
|
473
|
+
{
|
474
|
+
GetMCosts(F);
|
475
|
+
}
|
476
|
+
break;
|
477
|
+
case SAMPLEP:
|
478
|
+
sscanf(PropVal, "\"%f\"", &SAMPLE);
|
479
|
+
break;
|
480
|
+
|
481
|
+
case INITP:
|
482
|
+
sscanf(PropVal, "\"%d\"", &KRInit);
|
483
|
+
break;
|
484
|
+
|
485
|
+
case ATTP:
|
486
|
+
Unquoted = RemoveQuotes(PropVal);
|
487
|
+
Att = Which(Unquoted, AttName, 1, MaxAtt);
|
488
|
+
if ( ! Att || Exclude(Att) )
|
489
|
+
{
|
490
|
+
Error(MODELFILE, E_MFATT, Unquoted);
|
491
|
+
}
|
492
|
+
break;
|
493
|
+
|
494
|
+
case ELTSP:
|
495
|
+
MaxAttVal[Att] = 1;
|
496
|
+
AttValName[Att][1] = strdup("N/A");
|
497
|
+
|
498
|
+
for ( p = PropVal ; *p ; )
|
499
|
+
{
|
500
|
+
p = RemoveQuotes(p);
|
501
|
+
v = ++MaxAttVal[Att];
|
502
|
+
AttValName[Att][v] = strdup(p);
|
503
|
+
|
504
|
+
for ( p += strlen(p) ; *p != '"' ; p++ )
|
505
|
+
;
|
506
|
+
p++;
|
507
|
+
if ( *p == ',' ) p++;
|
508
|
+
}
|
509
|
+
AttValName[Att][MaxAttVal[Att]+1] = "<other>";
|
510
|
+
MaxDiscrVal = Max(MaxDiscrVal, MaxAttVal[Att]+1);
|
511
|
+
break;
|
512
|
+
|
513
|
+
case ENTRIESP:
|
514
|
+
sscanf(PropVal, "\"%d\"", &TRIALS);
|
515
|
+
Entry = 0;
|
516
|
+
return;
|
517
|
+
}
|
518
|
+
}
|
519
|
+
}
|
520
|
+
|
521
|
+
|
522
|
+
|
523
|
+
/*************************************************************************/
|
524
|
+
/* */
|
525
|
+
/* Retrieve decision tree with extension Extension */
|
526
|
+
/* */
|
527
|
+
/*************************************************************************/
|
528
|
+
|
529
|
+
|
530
|
+
Tree GetTree(String Extension)
|
531
|
+
/* ------- */
|
532
|
+
{
|
533
|
+
CheckFile(Extension, false);
|
534
|
+
|
535
|
+
return InTree();
|
536
|
+
}
|
537
|
+
|
538
|
+
|
539
|
+
|
540
|
+
Tree InTree()
|
541
|
+
/* ------ */
|
542
|
+
{
|
543
|
+
Tree T;
|
544
|
+
DiscrValue v, Subset=0;
|
545
|
+
char Delim, *p;
|
546
|
+
ClassNo c;
|
547
|
+
int X;
|
548
|
+
double XD;
|
549
|
+
|
550
|
+
T = (Tree) AllocZero(1, TreeRec);
|
551
|
+
|
552
|
+
do
|
553
|
+
{
|
554
|
+
switch ( ReadProp(&Delim) )
|
555
|
+
{
|
556
|
+
case ERRORP:
|
557
|
+
return Nil;
|
558
|
+
|
559
|
+
case TYPEP:
|
560
|
+
sscanf(PropVal, "\"%d\"", &X); T->NodeType = X;
|
561
|
+
break;
|
562
|
+
|
563
|
+
case CLASSP:
|
564
|
+
Unquoted = RemoveQuotes(PropVal);
|
565
|
+
T->Leaf = Which(Unquoted, ClassName, 1, MaxClass);
|
566
|
+
if ( ! T->Leaf ) Error(MODELFILE, E_MFCLASS, Unquoted);
|
567
|
+
break;
|
568
|
+
|
569
|
+
case ATTP:
|
570
|
+
Unquoted = RemoveQuotes(PropVal);
|
571
|
+
T->Tested = Which(Unquoted, AttName, 1, MaxAtt);
|
572
|
+
if ( ! T->Tested || Exclude(T->Tested) )
|
573
|
+
{
|
574
|
+
Error(MODELFILE, E_MFATT, Unquoted);
|
575
|
+
}
|
576
|
+
break;
|
577
|
+
|
578
|
+
case CUTP:
|
579
|
+
sscanf(PropVal, "\"%lf\"", &XD); T->Cut = XD;
|
580
|
+
T->Lower = T->Mid = T->Upper = T->Cut;
|
581
|
+
break;
|
582
|
+
|
583
|
+
case LOWP:
|
584
|
+
sscanf(PropVal, "\"%lf\"", &XD); T->Lower = XD;
|
585
|
+
break;
|
586
|
+
|
587
|
+
case MIDP:
|
588
|
+
sscanf(PropVal, "\"%lf\"", &XD); T->Mid = XD;
|
589
|
+
break;
|
590
|
+
|
591
|
+
case HIGHP:
|
592
|
+
sscanf(PropVal, "\"%lf\"", &XD); T->Upper = XD;
|
593
|
+
break;
|
594
|
+
|
595
|
+
case FORKSP:
|
596
|
+
sscanf(PropVal, "\"%d\"", &T->Forks);
|
597
|
+
break;
|
598
|
+
|
599
|
+
case FREQP:
|
600
|
+
T->ClassDist = Alloc(MaxClass+1, CaseCount);
|
601
|
+
p = PropVal+1;
|
602
|
+
|
603
|
+
ForEach(c, 1, MaxClass)
|
604
|
+
{
|
605
|
+
T->ClassDist[c] = strtod(p, &p);
|
606
|
+
T->Cases += T->ClassDist[c];
|
607
|
+
p++;
|
608
|
+
}
|
609
|
+
break;
|
610
|
+
|
611
|
+
case ELTSP:
|
612
|
+
if ( ! Subset++ )
|
613
|
+
{
|
614
|
+
T->Subset = AllocZero(T->Forks+1, Set);
|
615
|
+
}
|
616
|
+
|
617
|
+
T->Subset[Subset] = MakeSubset(T->Tested);
|
618
|
+
break;
|
619
|
+
}
|
620
|
+
}
|
621
|
+
while ( Delim == ' ' );
|
622
|
+
|
623
|
+
if ( T->ClassDist )
|
624
|
+
{
|
625
|
+
T->Errors = T->Cases - T->ClassDist[T->Leaf];
|
626
|
+
}
|
627
|
+
else
|
628
|
+
{
|
629
|
+
T->ClassDist = Alloc(1, CaseCount);
|
630
|
+
}
|
631
|
+
|
632
|
+
if ( T->NodeType )
|
633
|
+
{
|
634
|
+
T->Branch = AllocZero(T->Forks+1, Tree);
|
635
|
+
ForEach(v, 1, T->Forks)
|
636
|
+
{
|
637
|
+
T->Branch[v] = InTree();
|
638
|
+
}
|
639
|
+
}
|
640
|
+
|
641
|
+
return T;
|
642
|
+
}
|
643
|
+
|
644
|
+
|
645
|
+
|
646
|
+
/*************************************************************************/
|
647
|
+
/* */
|
648
|
+
/* Retrieve ruleset with extension Extension */
|
649
|
+
/* (Separate functions for ruleset, single rule, single condition) */
|
650
|
+
/* */
|
651
|
+
/*************************************************************************/
|
652
|
+
|
653
|
+
|
654
|
+
CRuleSet GetRules(String Extension)
|
655
|
+
/* -------- */
|
656
|
+
{
|
657
|
+
CheckFile(Extension, false);
|
658
|
+
|
659
|
+
return InRules();
|
660
|
+
}
|
661
|
+
|
662
|
+
|
663
|
+
|
664
|
+
CRuleSet InRules()
|
665
|
+
/* ------- */
|
666
|
+
{
|
667
|
+
CRuleSet RS;
|
668
|
+
RuleNo r;
|
669
|
+
char Delim;
|
670
|
+
|
671
|
+
RS = Alloc(1, RuleSetRec);
|
672
|
+
|
673
|
+
do
|
674
|
+
{
|
675
|
+
switch ( ReadProp(&Delim) )
|
676
|
+
{
|
677
|
+
case ERRORP:
|
678
|
+
return Nil;
|
679
|
+
|
680
|
+
case RULESP:
|
681
|
+
sscanf(PropVal, "\"%d\"", &RS->SNRules);
|
682
|
+
CheckActiveSpace(RS->SNRules);
|
683
|
+
break;
|
684
|
+
|
685
|
+
case DEFAULTP:
|
686
|
+
Unquoted = RemoveQuotes(PropVal);
|
687
|
+
RS->SDefault = Which(Unquoted, ClassName, 1, MaxClass);
|
688
|
+
if ( ! RS->SDefault ) Error(MODELFILE, E_MFCLASS, Unquoted);
|
689
|
+
break;
|
690
|
+
}
|
691
|
+
}
|
692
|
+
while ( Delim == ' ' );
|
693
|
+
|
694
|
+
/* Read each rule */
|
695
|
+
|
696
|
+
RS->SRule = Alloc(RS->SNRules+1, CRule);
|
697
|
+
ForEach(r, 1, RS->SNRules)
|
698
|
+
{
|
699
|
+
if ( (RS->SRule[r] = InRule()) )
|
700
|
+
{
|
701
|
+
RS->SRule[r]->RNo = r;
|
702
|
+
RS->SRule[r]->TNo = Entry;
|
703
|
+
}
|
704
|
+
}
|
705
|
+
ConstructRuleTree(RS);
|
706
|
+
Entry++;
|
707
|
+
return RS;
|
708
|
+
}
|
709
|
+
|
710
|
+
|
711
|
+
|
712
|
+
CRule InRule()
|
713
|
+
/* ------ */
|
714
|
+
{
|
715
|
+
CRule R;
|
716
|
+
int d;
|
717
|
+
char Delim;
|
718
|
+
float Lift;
|
719
|
+
|
720
|
+
R = Alloc(1, RuleRec);
|
721
|
+
|
722
|
+
do
|
723
|
+
{
|
724
|
+
switch ( ReadProp(&Delim) )
|
725
|
+
{
|
726
|
+
case ERRORP:
|
727
|
+
return Nil;
|
728
|
+
|
729
|
+
case CONDSP:
|
730
|
+
sscanf(PropVal, "\"%d\"", &R->Size);
|
731
|
+
break;
|
732
|
+
|
733
|
+
case COVERP:
|
734
|
+
sscanf(PropVal, "\"%f\"", &R->Cover);
|
735
|
+
break;
|
736
|
+
|
737
|
+
case OKP:
|
738
|
+
sscanf(PropVal, "\"%f\"", &R->Correct);
|
739
|
+
break;
|
740
|
+
|
741
|
+
case LIFTP:
|
742
|
+
sscanf(PropVal, "\"%f\"", &Lift);
|
743
|
+
R->Prior = (R->Correct + 1) / ((R->Cover + 2) * Lift);
|
744
|
+
break;
|
745
|
+
|
746
|
+
case CLASSP:
|
747
|
+
Unquoted = RemoveQuotes(PropVal);
|
748
|
+
R->Rhs = Which(Unquoted, ClassName, 1, MaxClass);
|
749
|
+
if ( ! R->Rhs ) Error(MODELFILE, E_MFCLASS, Unquoted);
|
750
|
+
break;
|
751
|
+
}
|
752
|
+
}
|
753
|
+
while ( Delim == ' ' );
|
754
|
+
|
755
|
+
R->Lhs = Alloc(R->Size+1, Condition);
|
756
|
+
ForEach(d, 1, R->Size)
|
757
|
+
{
|
758
|
+
R->Lhs[d] = InCondition();
|
759
|
+
}
|
760
|
+
|
761
|
+
R->Vote = 1000 * (R->Correct + 1.0) / (R->Cover + 2.0) + 0.5;
|
762
|
+
|
763
|
+
return R;
|
764
|
+
}
|
765
|
+
|
766
|
+
|
767
|
+
|
768
|
+
Condition InCondition()
|
769
|
+
/* ----------- */
|
770
|
+
{
|
771
|
+
Condition C;
|
772
|
+
char Delim;
|
773
|
+
int X;
|
774
|
+
double XD;
|
775
|
+
|
776
|
+
C = Alloc(1, CondRec);
|
777
|
+
|
778
|
+
do
|
779
|
+
{
|
780
|
+
switch ( ReadProp(&Delim) )
|
781
|
+
{
|
782
|
+
case ERRORP:
|
783
|
+
return Nil;
|
784
|
+
|
785
|
+
case TYPEP:
|
786
|
+
sscanf(PropVal, "\"%d\"", &X); C->NodeType = X;
|
787
|
+
break;
|
788
|
+
|
789
|
+
case ATTP:
|
790
|
+
Unquoted = RemoveQuotes(PropVal);
|
791
|
+
C->Tested = Which(Unquoted, AttName, 1, MaxAtt);
|
792
|
+
if ( ! C->Tested || Exclude(C->Tested) )
|
793
|
+
{
|
794
|
+
Error(MODELFILE, E_MFATT, Unquoted);
|
795
|
+
}
|
796
|
+
break;
|
797
|
+
|
798
|
+
case CUTP:
|
799
|
+
sscanf(PropVal, "\"%lf\"", &XD); C->Cut = XD;
|
800
|
+
break;
|
801
|
+
|
802
|
+
case RESULTP:
|
803
|
+
C->TestValue = ( PropVal[1] == '<' ? 2 : 3 );
|
804
|
+
break;
|
805
|
+
|
806
|
+
case VALP:
|
807
|
+
if ( Continuous(C->Tested) )
|
808
|
+
{
|
809
|
+
C->TestValue = 1;
|
810
|
+
}
|
811
|
+
else
|
812
|
+
{
|
813
|
+
Unquoted = RemoveQuotes(PropVal);
|
814
|
+
C->TestValue = Which(Unquoted,
|
815
|
+
AttValName[C->Tested],
|
816
|
+
1, MaxAttVal[C->Tested]);
|
817
|
+
if ( ! C->TestValue ) Error(MODELFILE, E_MFATTVAL, Unquoted);
|
818
|
+
}
|
819
|
+
break;
|
820
|
+
|
821
|
+
case ELTSP:
|
822
|
+
C->Subset = MakeSubset(C->Tested);
|
823
|
+
C->TestValue = 1;
|
824
|
+
break;
|
825
|
+
}
|
826
|
+
}
|
827
|
+
while ( Delim == ' ' );
|
828
|
+
|
829
|
+
return C;
|
830
|
+
}
|
831
|
+
|
832
|
+
|
833
|
+
|
834
|
+
/*************************************************************************/
|
835
|
+
/* */
|
836
|
+
/* ASCII reading utilities */
|
837
|
+
/* */
|
838
|
+
/*************************************************************************/
|
839
|
+
|
840
|
+
|
841
|
+
int ReadProp(char *Delim)
|
842
|
+
/* -------- */
|
843
|
+
{
|
844
|
+
int c, i;
|
845
|
+
char *p;
|
846
|
+
Boolean Quote=false;
|
847
|
+
|
848
|
+
for ( p = PropName ; (c = fgetc(TRf)) != '=' ; )
|
849
|
+
{
|
850
|
+
if ( p - PropName >= 19 || c == EOF )
|
851
|
+
{
|
852
|
+
Error(MODELFILE, E_MFEOF, "");
|
853
|
+
PropName[0] = PropVal[0] = *Delim = '\00';
|
854
|
+
return 0;
|
855
|
+
}
|
856
|
+
*p++ = c;
|
857
|
+
}
|
858
|
+
*p = '\00';
|
859
|
+
|
860
|
+
for ( p = PropVal ; ((c = fgetc(TRf)) != ' ' && c != '\n') || Quote ; )
|
861
|
+
{
|
862
|
+
if ( c == EOF )
|
863
|
+
{
|
864
|
+
Error(MODELFILE, E_MFEOF, "");
|
865
|
+
PropName[0] = PropVal[0] = '\00';
|
866
|
+
return 0;
|
867
|
+
}
|
868
|
+
|
869
|
+
if ( (i = p - PropVal) >= PropValSize )
|
870
|
+
{
|
871
|
+
Realloc(PropVal, (PropValSize += 10000) + 3, char);
|
872
|
+
p = PropVal + i;
|
873
|
+
}
|
874
|
+
|
875
|
+
*p++ = c;
|
876
|
+
if ( c == '\\' )
|
877
|
+
{
|
878
|
+
*p++ = fgetc(TRf);
|
879
|
+
}
|
880
|
+
else
|
881
|
+
if ( c == '"' )
|
882
|
+
{
|
883
|
+
Quote = ! Quote;
|
884
|
+
}
|
885
|
+
}
|
886
|
+
*p = '\00';
|
887
|
+
*Delim = c;
|
888
|
+
|
889
|
+
return Which(PropName, Prop, 1, PROPS);
|
890
|
+
}
|
891
|
+
|
892
|
+
|
893
|
+
String RemoveQuotes(String S)
|
894
|
+
/* ------------ */
|
895
|
+
{
|
896
|
+
char *p, *Start;
|
897
|
+
|
898
|
+
p = Start = S;
|
899
|
+
|
900
|
+
for ( S++ ; *S != '"' ; S++ )
|
901
|
+
{
|
902
|
+
if ( *S == '\\' ) S++;
|
903
|
+
*p++ = *S;
|
904
|
+
*S = '-';
|
905
|
+
}
|
906
|
+
*p = '\00';
|
907
|
+
|
908
|
+
return Start;
|
909
|
+
}
|
910
|
+
|
911
|
+
|
912
|
+
|
913
|
+
Set MakeSubset(Attribute Att)
|
914
|
+
/* ---------- */
|
915
|
+
{
|
916
|
+
int Bytes, b;
|
917
|
+
char *p;
|
918
|
+
Set S;
|
919
|
+
|
920
|
+
Bytes = (MaxAttVal[Att]>>3) + 1;
|
921
|
+
S = AllocZero(Bytes, Byte);
|
922
|
+
|
923
|
+
for ( p = PropVal ; *p ; )
|
924
|
+
{
|
925
|
+
p = RemoveQuotes(p);
|
926
|
+
b = Which(p, AttValName[Att], 1, MaxAttVal[Att]);
|
927
|
+
if ( ! b ) Error(MODELFILE, E_MFATTVAL, p);
|
928
|
+
SetBit(b, S);
|
929
|
+
|
930
|
+
for ( p += strlen(p) ; *p != '"' ; p++ )
|
931
|
+
;
|
932
|
+
p++;
|
933
|
+
if ( *p == ',' ) p++;
|
934
|
+
}
|
935
|
+
|
936
|
+
return S;
|
937
|
+
}
|
938
|
+
|
939
|
+
|
940
|
+
|
941
|
+
/*************************************************************************/
|
942
|
+
/* */
|
943
|
+
/* Character stream read for binary routines */
|
944
|
+
/* */
|
945
|
+
/*************************************************************************/
|
946
|
+
|
947
|
+
|
948
|
+
void StreamIn(String S, int n)
|
949
|
+
/* -------- */
|
950
|
+
{
|
951
|
+
while ( n-- ) *S++ = getc(TRf);
|
952
|
+
}
|