scicom 0.3.0-java → 0.4.0-java

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Files changed (155) hide show
  1. checksums.yaml +4 -4
  2. data/README.md +239 -55
  3. data/Rakefile +58 -5
  4. data/config.rb +34 -2
  5. data/doc/Array.html +153 -0
  6. data/doc/Java/OrgRenjinSexp/LogicalArrayVector.html +120 -0
  7. data/doc/Java/OrgRenjinSexp/StringArrayVector.html +133 -0
  8. data/doc/Java/RbScicom/MDDoubleVector.html +133 -0
  9. data/doc/MDArray.html +153 -0
  10. data/doc/MergeObservable.html +347 -0
  11. data/doc/NegRange.html +166 -0
  12. data/doc/PackageManager.html +823 -0
  13. data/doc/PackageManager/ParseXML.html +595 -0
  14. data/doc/Range.html +243 -0
  15. data/doc/Renjin.html +2210 -0
  16. data/doc/Renjin/Attributes.html +401 -0
  17. data/doc/Renjin/Closure.html +181 -0
  18. data/doc/Renjin/ComplexVector.html +557 -0
  19. data/doc/Renjin/DataFrame.html +258 -0
  20. data/doc/Renjin/Environment.html +279 -0
  21. data/doc/Renjin/Function.html +243 -0
  22. data/doc/Renjin/Index.html +628 -0
  23. data/doc/Renjin/List.html +398 -0
  24. data/doc/Renjin/Logical.html +352 -0
  25. data/doc/Renjin/Primitive.html +181 -0
  26. data/doc/Renjin/RBSexp.html +1151 -0
  27. data/doc/Renjin/RubySexp.html +498 -0
  28. data/doc/Renjin/Vector.html +3163 -0
  29. data/doc/RinRuby.html +2079 -0
  30. data/doc/_index.html +365 -0
  31. data/doc/class_list.html +58 -0
  32. data/doc/css/common.css +1 -0
  33. data/doc/css/full_list.css +57 -0
  34. data/doc/css/style.css +339 -0
  35. data/doc/file.README.html +159 -0
  36. data/doc/file_list.html +60 -0
  37. data/doc/frames.html +26 -0
  38. data/doc/index.html +159 -0
  39. data/doc/js/app.js +219 -0
  40. data/doc/js/full_list.js +181 -0
  41. data/doc/js/jquery.js +4 -0
  42. data/doc/method_list.html +939 -0
  43. data/doc/top-level-namespace.html +679 -0
  44. data/lib/JRubyR/attributes.rb +5 -2
  45. data/lib/JRubyR/callback.rb +115 -0
  46. data/lib/JRubyR/environment.rb +0 -1
  47. data/lib/JRubyR/indexed.rb +139 -0
  48. data/lib/JRubyR/list.rb +0 -16
  49. data/lib/JRubyR/logical_value.rb +0 -1
  50. data/lib/JRubyR/rbsexp.rb +20 -131
  51. data/lib/JRubyR/renjin.rb +201 -71
  52. data/lib/JRubyR/vector.rb +16 -15
  53. data/lib/scicom.rb +1 -3
  54. data/target/helper.jar +0 -0
  55. data/test/test_R_interface.rb +1 -1
  56. data/test/test_array.rb +1 -1
  57. data/test/test_assign_mdarray.rb +1 -1
  58. data/test/test_assign_mdarray_2d.rb +1 -1
  59. data/test/test_assign_mdarray_3d.rb +1 -1
  60. data/test/test_attributes.rb +1 -1
  61. data/test/test_basic.rb +7 -5
  62. data/test/test_callback.rb +176 -0
  63. data/test/test_complete.rb +1 -1
  64. data/test/test_creation.rb +29 -5
  65. data/test/test_dataframe.rb +1 -1
  66. data/test/test_factor.rb +1 -1
  67. data/test/test_functions.rb +13 -10
  68. data/test/test_linear_model.rb +1 -1
  69. data/test/test_list.rb +49 -10
  70. data/test/test_matrix.rb +6 -6
  71. data/test/test_operators.rb +1 -1
  72. data/test/test_package.rb +5 -5
  73. data/test/test_vector.rb +13 -7
  74. data/vendor/aether-api-1.0.2.v20150114.jar +0 -0
  75. data/vendor/aether-connector-basic-1.0.2.v20150114.jar +0 -0
  76. data/vendor/aether-impl-1.0.2.v20150114.jar +0 -0
  77. data/vendor/aether-spi-1.0.2.v20150114.jar +0 -0
  78. data/vendor/aether-transport-file-1.0.2.v20150114.jar +0 -0
  79. data/vendor/aether-transport-http-1.0.2.v20150114.jar +0 -0
  80. data/vendor/aether-util-1.0.2.v20150114.jar +0 -0
  81. data/vendor/aopalliance-1.0.jar +0 -0
  82. data/vendor/asm-3.3.1.jar +0 -0
  83. data/vendor/asm-5.0.4.jar +0 -0
  84. data/vendor/asm-commons-5.0.4.jar +0 -0
  85. data/vendor/asm-tree-5.0.4.jar +0 -0
  86. data/vendor/asm-util-5.0.4.jar +0 -0
  87. data/vendor/blas-0.8.jar +0 -0
  88. data/vendor/cdi-api-1.0.jar +0 -0
  89. data/vendor/codemodel-2.6.jar +0 -0
  90. data/vendor/collections-generic-4.01.jar +0 -0
  91. data/vendor/commons-codec-1.6.jar +0 -0
  92. data/vendor/commons-compress-1.4.1.jar +0 -0
  93. data/vendor/commons-logging-1.1.1.jar +0 -0
  94. data/vendor/commons-math-2.2.jar +0 -0
  95. data/vendor/commons-vfs2-2.0.jar +0 -0
  96. data/vendor/datasets-0.8.1891.jar +0 -0
  97. data/vendor/f2jutil-0.8.jar +0 -0
  98. data/vendor/gcc-runtime-0.8.1891.jar +0 -0
  99. data/vendor/grDevices-0.8.1891.jar +0 -0
  100. data/vendor/graphics-0.8.1891.jar +0 -0
  101. data/vendor/guava-17.0.jar +0 -0
  102. data/vendor/httpclient-4.2.6.jar +0 -0
  103. data/vendor/httpcore-4.2.5.jar +0 -0
  104. data/vendor/javax.inject-1.jar +0 -0
  105. data/vendor/jcl-over-slf4j-1.6.2.jar +0 -0
  106. data/vendor/joda-time-2.0.jar +0 -0
  107. data/vendor/jsr250-api-1.0.jar +0 -0
  108. data/vendor/jtransforms-2.4.jar +0 -0
  109. data/vendor/jung-api-2.0.1.jar +0 -0
  110. data/vendor/jung-graph-impl-2.0.1.jar +0 -0
  111. data/vendor/lapack-0.8.jar +0 -0
  112. data/vendor/maven-aether-provider-3.1.0.jar +0 -0
  113. data/vendor/maven-model-3.1.0.jar +0 -0
  114. data/vendor/maven-model-builder-3.1.0.jar +0 -0
  115. data/vendor/maven-repository-metadata-3.1.0.jar +0 -0
  116. data/vendor/maven-scm-api-1.4.jar +0 -0
  117. data/vendor/maven-scm-provider-svn-commons-1.4.jar +0 -0
  118. data/vendor/maven-scm-provider-svnexe-1.4.jar +0 -0
  119. data/vendor/maven-settings-3.1.0.jar +0 -0
  120. data/vendor/maven-settings-builder-3.1.0.jar +0 -0
  121. data/vendor/methods-0.8.1891.jar +0 -0
  122. data/vendor/netlib-java-0.9.3-renjin-patched-2.jar +0 -0
  123. data/vendor/org.eclipse.sisu.inject-0.0.0.M2a.jar +0 -0
  124. data/vendor/org.eclipse.sisu.plexus-0.0.0.M2a.jar +0 -0
  125. data/vendor/plexus-cipher-1.4.jar +0 -0
  126. data/vendor/plexus-classworlds-2.4.jar +0 -0
  127. data/vendor/plexus-component-annotations-1.5.5.jar +0 -0
  128. data/vendor/plexus-interpolation-1.16.jar +0 -0
  129. data/vendor/plexus-sec-dispatcher-1.3.jar +0 -0
  130. data/vendor/plexus-utils-1.5.6.jar +0 -0
  131. data/vendor/plexus-utils-3.0.10.jar +0 -0
  132. data/vendor/regexp-1.3.jar +0 -0
  133. data/vendor/renjin-aether-package-loader-0.8.1891.jar +0 -0
  134. data/vendor/renjin-appl-0.8.1891.jar +0 -0
  135. data/vendor/renjin-core-0.8.1891.jar +0 -0
  136. data/vendor/renjin-gnur-runtime-0.8.1891.jar +0 -0
  137. data/vendor/renjin-script-engine-0.8.1891.jar +0 -0
  138. data/vendor/sisu-guice-3.1.0-no_aop.jar +0 -0
  139. data/vendor/slf4j-api-1.6.2.jar +0 -0
  140. data/vendor/stats-0.8.1891.jar +0 -0
  141. data/vendor/utils-0.8.1891.jar +0 -0
  142. data/vendor/xerbla-0.8.jar +0 -0
  143. data/vendor/xz-1.0.jar +0 -0
  144. data/version.rb +1 -1
  145. metadata +229 -127
  146. data/cran/AppliedPredictiveModeling.jar +0 -0
  147. data/cran/AppliedPredictiveModeling.xml +0 -25
  148. data/cran/AssetPricing.jar +0 -0
  149. data/cran/AssetPricing.xml +0 -25
  150. data/lib/env.rb +0 -12
  151. data/lib/rinruby.rb +0 -795
  152. data/test/env.rb +0 -2
  153. data/test/test_tmp.rb +0 -67
  154. data/vendor/Renjin.pdf +0 -0
  155. data/vendor/renjin-script-engine-0.7.0-RC7-SNAPSHOT-jar-with-dependencies.jar +0 -0
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+ <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
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+ "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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+ <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
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+ <head>
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+ <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
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+ <title>
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+ Class: Range
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+
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+ &mdash; Documentation by YARD 0.8.7.6
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+ </title>
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+ <link rel="stylesheet" href="css/style.css" type="text/css" charset="utf-8" />
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+ <link rel="stylesheet" href="css/common.css" type="text/css" charset="utf-8" />
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+ hasFrames = window.top.frames.main ? true : false;
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+ </head>
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+ <div id="header">
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+ <div id="menu">
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+ <a href="_index.html">Index (R)</a> &raquo;
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+ <span class="title">Range</span>
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+ <div class="noframes"><span class="title">(</span><a href="." target="_top">no frames</a><span class="title">)</span></div>
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+ </div>
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+ <div id="search">
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+ <a class="full_list_link" id="class_list_link"
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+ href="class_list.html">
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+ Class List
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+ </a>
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+ <a class="full_list_link" id="method_list_link"
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+ href="method_list.html">
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+ Method List
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+ </a>
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+ <a class="full_list_link" id="file_list_link"
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+ File List
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+ <div class="clear"></div>
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+ </div>
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+ <iframe id="search_frame"></iframe>
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+ <div id="content"><h1>Class: Range
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+ </h1>
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+
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+ <dl class="box">
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+
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+ <dt class="r1">Inherits:</dt>
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+ <dd class="r1">
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+ <span class="inheritName">Object</span>
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+
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+ <ul class="fullTree">
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+ <li>Object</li>
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+
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+ <li class="next">Range</li>
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+ </ul>
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+ <a href="#" class="inheritanceTree">show all</a>
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+
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+ </dd>
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+ <dt class="r2">Includes:</dt>
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+ <dd class="r2"><span class='object_link'><a href="Renjin/RBSexp.html" title="Renjin::RBSexp (module)">Renjin::RBSexp</a></span></dd>
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+ <dt class="r1 last">Defined in:</dt>
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+ <dd class="r1 last">lib/JRubyR/ruby_classes.rb</dd>
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+
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+ </dl>
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+ <div class="clear"></div>
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+ <h2>Overview</h2><div class="docstring">
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+ <div class="discussion">
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+ <h6 id="label-"></h6>
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+ </div>
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+ <div class="tags">
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+ </div><div id="subclasses">
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+ <h2>Direct Known Subclasses</h2>
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+ <p class="children"><span class='object_link'><a href="NegRange.html" title="NegRange (class)">NegRange</a></span></p>
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+ </div>
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+ <h2>Instance Attribute Summary</h2>
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+ <h3 class="inherited">Attributes included from <span class='object_link'><a href="Renjin/RBSexp.html" title="Renjin::RBSexp (module)">Renjin::RBSexp</a></span></h3>
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+ <p class="inherited"><span class='object_link'><a href="Renjin/RBSexp.html#attr-instance_method" title="Renjin::RBSexp#attr (method)">#attr</a></span>, <span class='object_link'><a href="Renjin/RBSexp.html#rvar-instance_method" title="Renjin::RBSexp#rvar (method)">#rvar</a></span>, <span class='object_link'><a href="Renjin/RBSexp.html#scope-instance_method" title="Renjin::RBSexp#scope (method)">#scope</a></span>, <span class='object_link'><a href="Renjin/RBSexp.html#sexp-instance_method" title="Renjin::RBSexp#sexp (method)">#sexp</a></span></p>
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+ <h2>
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+ Instance Method Summary
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+ <small>(<a href="#" class="summary_toggle">collapse</a>)</small>
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+ </h2>
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+ <ul class="summary">
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+ <li class="public ">
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+ <a href="#-%40-instance_method" title="#-@ (instance method)">- (Object) <strong>-@</strong> </a>
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+ <span class="summary_desc"><div class='inline'>
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+ <p>----------------------------------------------------------------------------------------
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+ Defines unary minus operation for ranges
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+ ----------------------------------------------------------------------------------------.</p>
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+ </div></span>
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+ </li>
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+ </ul>
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+ <h3 class="inherited">Methods included from <span class='object_link'><a href="Renjin/RBSexp.html" title="Renjin::RBSexp (module)">Renjin::RBSexp</a></span></h3>
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+ <p class="inherited"><span class='object_link'><a href="Renjin/RBSexp.html#destroy-instance_method" title="Renjin::RBSexp#destroy (method)">#destroy</a></span>, <span class='object_link'><a href="Renjin/RBSexp.html#ncol-instance_method" title="Renjin::RBSexp#ncol (method)">#ncol</a></span>, <span class='object_link'><a href="Renjin/RBSexp.html#nrow-instance_method" title="Renjin::RBSexp#nrow (method)">#nrow</a></span>, <span class='object_link'><a href="Renjin/RBSexp.html#pp-instance_method" title="Renjin::RBSexp#pp (method)">#pp</a></span>, <span class='object_link'><a href="Renjin/RBSexp.html#print-instance_method" title="Renjin::RBSexp#print (method)">#print</a></span>, <span class='object_link'><a href="Renjin/RBSexp.html#r-instance_method" title="Renjin::RBSexp#r (method)">#r</a></span>, <span class='object_link'><a href="Renjin/RBSexp.html#rclass-instance_method" title="Renjin::RBSexp#rclass (method)">#rclass</a></span>, <span class='object_link'><a href="Renjin/RBSexp.html#sexp%3F-instance_method" title="Renjin::RBSexp#sexp? (method)">#sexp?</a></span>, <span class='object_link'><a href="Renjin/RBSexp.html#typeof-instance_method" title="Renjin::RBSexp#typeof (method)">#typeof</a></span>, <span class='object_link'><a href="Renjin/RBSexp.html#unbind-instance_method" title="Renjin::RBSexp#unbind (method)">#unbind</a></span></p>
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+ <h2>Instance Method Details</h2>
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+ <div class="method_details first">
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+ <h3 class="signature first" id="-@-instance_method">
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+ - (<tt>Object</tt>) <strong>-@</strong>
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+ </h3><div class="docstring">
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+ <div class="discussion">
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+ <hr>
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+
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+ <p>Defines unary minus operation for ranges</p>
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+ <hr>
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+ </div>
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+ </div>
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+ <div class="tags">
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+ </div><table class="source_code">
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+ <tr>
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+ <td>
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+ <pre class="lines">
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+ 37</pre>
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+ </td>
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+ <td>
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+ <pre class="code"><span class="info file"># File 'lib/JRubyR/ruby_classes.rb', line 35</span>
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+
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+ <span class='kw'>def</span> <span class='op'>-@</span>
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+ <span class='const'>NegRange</span><span class='period'>.</span><span class='id identifier rubyid_new'>new</span><span class='lparen'>(</span><span class='kw'>self</span><span class='period'>.</span><span class='id identifier rubyid_begin'>begin</span><span class='comma'>,</span> <span class='kw'>self</span><span class='period'>.</span><span class='id identifier rubyid_end'>end</span><span class='rparen'>)</span>
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+ <span class='kw'>end</span></pre>
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+ </td>
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+ </tr>
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+ </table>
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+ </div>
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+
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+ </div>
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+
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+ </div>
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+
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+ <div id="footer">
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+ Generated on Tue Jul 14 18:12:24 2015 by
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+ <a href="http://yardoc.org" title="Yay! A Ruby Documentation Tool" target="_parent">yard</a>
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+ 0.8.7.6 (ruby-1.9.3).
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+ </div>
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+ </body>
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+ </html>
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+ <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
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+ "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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+ <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
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+ <head>
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+ <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
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+ <title>
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+ Class: Renjin
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+ &mdash; Documentation by YARD 0.8.7.6
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+ </title>
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+
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+ <link rel="stylesheet" href="css/style.css" type="text/css" charset="utf-8" />
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+ <link rel="stylesheet" href="css/common.css" type="text/css" charset="utf-8" />
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+
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+ <script type="text/javascript" charset="utf-8">
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+ hasFrames = window.top.frames.main ? true : false;
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+ relpath = '';
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+ framesUrl = "frames.html#!Renjin.html";
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+ </script>
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+
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+ <script type="text/javascript" charset="utf-8" src="js/jquery.js"></script>
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+ <script type="text/javascript" charset="utf-8" src="js/app.js"></script>
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+
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+
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+ </head>
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+ <body>
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+ <div id="header">
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+ <div id="menu">
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+
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+ <a href="_index.html">Index (R)</a> &raquo;
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+
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+
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+ <span class="title">Renjin</span>
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+
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+
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+ <div class="noframes"><span class="title">(</span><a href="." target="_top">no frames</a><span class="title">)</span></div>
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+ </div>
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+ <div id="search">
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+ <a class="full_list_link" id="class_list_link"
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+ href="class_list.html">
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+ Class List
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+ </a>
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+
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+ <a class="full_list_link" id="method_list_link"
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+ href="method_list.html">
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+ Method List
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+ </a>
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+
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+ <a class="full_list_link" id="file_list_link"
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+ href="file_list.html">
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+ File List
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+ </a>
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+
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+ </div>
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+ <div class="clear"></div>
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+ </div>
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+
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+ <iframe id="search_frame"></iframe>
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+
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+ <div id="content"><h1>Class: Renjin
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+
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+
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+
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+ </h1>
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+
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+ <dl class="box">
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+
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+ <dt class="r1">Inherits:</dt>
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+ <dd class="r1">
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+ <span class="inheritName">Object</span>
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+
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+ <ul class="fullTree">
79
+ <li>Object</li>
80
+
81
+ <li class="next">Renjin</li>
82
+
83
+ </ul>
84
+ <a href="#" class="inheritanceTree">show all</a>
85
+
86
+ </dd>
87
+
88
+
89
+
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+
91
+
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+
93
+
94
+
95
+
96
+ <dt class="r2 last">Defined in:</dt>
97
+ <dd class="r2 last">lib/JRubyR/attributes.rb<span class="defines">,<br />
98
+ lib/JRubyR/dataframe.rb,<br /> lib/JRubyR/environment.rb,<br /> lib/JRubyR/function.rb,<br /> lib/JRubyR/list.rb,<br /> lib/JRubyR/logical_value.rb,<br /> lib/JRubyR/rbsexp.rb,<br /> lib/JRubyR/rbsexp.rb,<br /> lib/JRubyR/vector.rb,<br /> lib/JRubyR/vector.rb,<br /> lib/JRubyR/renjin.rb</span>
99
+ </dd>
100
+
101
+ </dl>
102
+ <div class="clear"></div>
103
+
104
+ <h2>Overview</h2><div class="docstring">
105
+ <div class="discussion">
106
+
107
+ <h6 id="label-"></h6>
108
+
109
+ <h6 id="label-"></h6>
110
+
111
+
112
+ </div>
113
+ </div>
114
+ <div class="tags">
115
+
116
+
117
+ </div><h2>Defined Under Namespace</h2>
118
+ <p class="children">
119
+
120
+
121
+ <strong class="modules">Modules:</strong> <span class='object_link'><a href="Renjin/Index.html" title="Renjin::Index (module)">Index</a></span>, <span class='object_link'><a href="Renjin/RBSexp.html" title="Renjin::RBSexp (module)">RBSexp</a></span>
122
+
123
+
124
+
125
+ <strong class="classes">Classes:</strong> <span class='object_link'><a href="Renjin/Attributes.html" title="Renjin::Attributes (class)">Attributes</a></span>, <span class='object_link'><a href="Renjin/Closure.html" title="Renjin::Closure (class)">Closure</a></span>, <span class='object_link'><a href="Renjin/ComplexVector.html" title="Renjin::ComplexVector (class)">ComplexVector</a></span>, <span class='object_link'><a href="Renjin/DataFrame.html" title="Renjin::DataFrame (class)">DataFrame</a></span>, <span class='object_link'><a href="Renjin/Environment.html" title="Renjin::Environment (class)">Environment</a></span>, <span class='object_link'><a href="Renjin/Function.html" title="Renjin::Function (class)">Function</a></span>, <span class='object_link'><a href="Renjin/List.html" title="Renjin::List (class)">List</a></span>, <span class='object_link'><a href="Renjin/Logical.html" title="Renjin::Logical (class)">Logical</a></span>, <span class='object_link'><a href="Renjin/Primitive.html" title="Renjin::Primitive (class)">Primitive</a></span>, <span class='object_link'><a href="Renjin/RubySexp.html" title="Renjin::RubySexp (class)">RubySexp</a></span>, <span class='object_link'><a href="Renjin/Vector.html" title="Renjin::Vector (class)">Vector</a></span>
126
+
127
+
128
+ </p>
129
+
130
+ <h2>Constant Summary</h2>
131
+
132
+ <dl class="constants">
133
+
134
+ <dt id="ParseError-constant" class="">ParseError =
135
+ <div class="docstring">
136
+ <div class="discussion">
137
+
138
+ <p>Parse error</p>
139
+
140
+
141
+ </div>
142
+ </div>
143
+ <div class="tags">
144
+
145
+
146
+ </div>
147
+ </dt>
148
+ <dd><pre class="code"><span class='const'>Class</span><span class='period'>.</span><span class='id identifier rubyid_new'>new</span><span class='lparen'>(</span><span class='const'>Exception</span><span class='rparen'>)</span></pre></dd>
149
+
150
+ </dl>
151
+
152
+
153
+
154
+
155
+
156
+ <h2>Class Attribute Summary <small>(<a href="#" class="summary_toggle">collapse</a>)</small></h2>
157
+ <ul class="summary">
158
+
159
+ <li class="public ">
160
+ <span class="summary_signature">
161
+
162
+ <a href="#stack-class_method" title="stack (class method)">+ (Object) <strong>stack</strong> </a>
163
+
164
+
165
+
166
+ </span>
167
+
168
+
169
+
170
+
171
+
172
+
173
+
174
+
175
+
176
+
177
+
178
+
179
+ <span class="summary_desc"><div class='inline'>
180
+ <p>Returns the value of attribute stack.</p>
181
+ </div></span>
182
+
183
+ </li>
184
+
185
+
186
+ </ul>
187
+
188
+ <h2>Instance Attribute Summary <small>(<a href="#" class="summary_toggle">collapse</a>)</small></h2>
189
+ <ul class="summary">
190
+
191
+ <li class="public ">
192
+ <span class="summary_signature">
193
+
194
+ <a href="#engine-instance_method" title="#engine (instance method)">- (Object) <strong>engine</strong> </a>
195
+
196
+
197
+
198
+ </span>
199
+
200
+
201
+
202
+
203
+ <span class="note title readonly">readonly</span>
204
+
205
+
206
+
207
+
208
+
209
+
210
+
211
+
212
+
213
+ <span class="summary_desc"><div class='inline'>
214
+ <p>----------------------------------------------------------------------------------------.</p>
215
+ </div></span>
216
+
217
+ </li>
218
+
219
+
220
+ </ul>
221
+
222
+
223
+
224
+
225
+
226
+ <h2>
227
+ Instance Method Summary
228
+ <small>(<a href="#" class="summary_toggle">collapse</a>)</small>
229
+ </h2>
230
+
231
+ <ul class="summary">
232
+
233
+ <li class="public ">
234
+ <span class="summary_signature">
235
+
236
+ <a href="#assign-instance_method" title="#assign (instance method)">- (Object) <strong>assign</strong>(name, value) </a>
237
+
238
+
239
+
240
+ </span>
241
+
242
+
243
+
244
+
245
+
246
+
247
+
248
+
249
+
250
+ <span class="summary_desc"><div class='inline'>
251
+ <p>—————————————————————————————- Data is copied from Ruby to R using the
252
+ assign method or a short-hand equivalent.</p>
253
+ </div></span>
254
+
255
+ </li>
256
+
257
+
258
+ <li class="public ">
259
+ <span class="summary_signature">
260
+
261
+ <a href="#build_vector-instance_method" title="#build_vector (instance method)">- (Object) <strong>build_vector</strong>(mdarray) </a>
262
+
263
+
264
+
265
+ </span>
266
+
267
+
268
+
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+
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+
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+
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+
273
+
274
+
275
+ <span class="summary_desc"><div class='inline'>
276
+ <p>----------------------------------------------------------------------------------------
277
+ Builds a Renjin vector from an MDArray.</p>
278
+ </div></span>
279
+
280
+ </li>
281
+
282
+
283
+ <li class="public ">
284
+ <span class="summary_signature">
285
+
286
+ <a href="#d-instance_method" title="#d (instance method)">- (Object) <strong>d</strong>(value) </a>
287
+
288
+
289
+
290
+ </span>
291
+
292
+
293
+
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+
295
+
296
+
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+
298
+
299
+
300
+ <span class="summary_desc"><div class='inline'></div></span>
301
+
302
+ </li>
303
+
304
+
305
+ <li class="public ">
306
+ <span class="summary_signature">
307
+
308
+ <a href="#direct_eval-instance_method" title="#direct_eval (instance method)">- (Object) <strong>direct_eval</strong>(expression) </a>
309
+
310
+
311
+
312
+ </span>
313
+
314
+
315
+
316
+
317
+
318
+
319
+
320
+
321
+
322
+ <span class="summary_desc"><div class='inline'>
323
+ <p>----------------------------------------------------------------------------------------
324
+ Evaluates an expression but does not wrap the return in a RubySexp.</p>
325
+ </div></span>
326
+
327
+ </li>
328
+
329
+
330
+ <li class="public ">
331
+ <span class="summary_signature">
332
+
333
+ <a href="#eval-instance_method" title="#eval (instance method)">- (Object) <strong>eval</strong>(expression) </a>
334
+
335
+
336
+
337
+ </span>
338
+
339
+
340
+
341
+
342
+
343
+
344
+
345
+
346
+
347
+ <span class="summary_desc"><div class='inline'>
348
+ <p>----------------------------------------------------------------------------------------.</p>
349
+ </div></span>
350
+
351
+ </li>
352
+
353
+
354
+ <li class="public ">
355
+ <span class="summary_signature">
356
+
357
+ <a href="#fassign-instance_method" title="#fassign (instance method)">- (Object) <strong>fassign</strong>(sexp, function, value) </a>
358
+
359
+
360
+
361
+ </span>
362
+
363
+
364
+
365
+
366
+
367
+
368
+
369
+
370
+
371
+ <span class="summary_desc"><div class='inline'>
372
+ <p>----------------------------------------------------------------------------------------
373
+ function is either a function name alone represented by a ruby symbol or a
374
+ hash with the function name and its arguments or indexes Ex:
375
+ fassign(sexp, :rowname, "x1") fassign(sexp, :rowname, index: [[1]],
376
+ "x1") fassign(sexp, :somefunc, params: "(2, 3, 4)", "x1")
377
+ ----------------------------------------------------------------------------------------.</p>
378
+ </div></span>
379
+
380
+ </li>
381
+
382
+
383
+ <li class="public ">
384
+ <span class="summary_signature">
385
+
386
+ <a href="#finite%3F-instance_method" title="#finite? (instance method)">- (Boolean) <strong>finite?</strong>(x) </a>
387
+
388
+
389
+
390
+ </span>
391
+
392
+
393
+
394
+
395
+
396
+
397
+
398
+
399
+
400
+ <span class="summary_desc"><div class='inline'>
401
+ <p>----------------------------------------------------------------------------------------.</p>
402
+ </div></span>
403
+
404
+ </li>
405
+
406
+
407
+ <li class="public ">
408
+ <span class="summary_signature">
409
+
410
+ <a href="#i-instance_method" title="#i (instance method)">- (Object) <strong>i</strong>(value) </a>
411
+
412
+
413
+
414
+ </span>
415
+
416
+
417
+
418
+
419
+
420
+
421
+
422
+
423
+
424
+ <span class="summary_desc"><div class='inline'></div></span>
425
+
426
+ </li>
427
+
428
+
429
+ <li class="public ">
430
+ <span class="summary_signature">
431
+
432
+ <a href="#initialize-instance_method" title="#initialize (instance method)">- (Renjin) <strong>initialize</strong> </a>
433
+
434
+
435
+
436
+ </span>
437
+
438
+
439
+ <span class="note title constructor">constructor</span>
440
+
441
+
442
+
443
+
444
+
445
+
446
+
447
+
448
+ <span class="summary_desc"><div class='inline'>
449
+ <p>----------------------------------------------------------------------------------------
450
+ R is invoked within a Ruby script (or the interactive "irb" prompt denoted
451
+ &gt;&gt;) using:.</p>
452
+ </div></span>
453
+
454
+ </li>
455
+
456
+
457
+ <li class="public ">
458
+ <span class="summary_signature">
459
+
460
+ <a href="#install__package-instance_method" title="#install__package (instance method)">- (Object) <strong>install__package</strong>(name) </a>
461
+
462
+
463
+
464
+ </span>
465
+
466
+
467
+
468
+
469
+
470
+
471
+
472
+
473
+
474
+ <span class="summary_desc"><div class='inline'>
475
+ <p>----------------------------------------------------------------------------------------.</p>
476
+ </div></span>
477
+
478
+ </li>
479
+
480
+
481
+ <li class="public ">
482
+ <span class="summary_signature">
483
+
484
+ <a href="#LETTERS-instance_method" title="#LETTERS (instance method)">- (Object) <strong>LETTERS</strong> </a>
485
+
486
+
487
+
488
+ </span>
489
+
490
+
491
+
492
+
493
+
494
+
495
+
496
+
497
+
498
+ <span class="summary_desc"><div class='inline'></div></span>
499
+
500
+ </li>
501
+
502
+
503
+ <li class="public ">
504
+ <span class="summary_signature">
505
+
506
+ <a href="#letters-instance_method" title="#letters (instance method)">- (Object) <strong>letters</strong> </a>
507
+
508
+
509
+
510
+ </span>
511
+
512
+
513
+
514
+
515
+
516
+
517
+
518
+
519
+
520
+ <span class="summary_desc"><div class='inline'></div></span>
521
+
522
+ </li>
523
+
524
+
525
+ <li class="public ">
526
+ <span class="summary_signature">
527
+
528
+ <a href="#library-instance_method" title="#library (instance method)">- (Object) <strong>library</strong>(package) </a>
529
+
530
+
531
+
532
+ </span>
533
+
534
+
535
+
536
+
537
+
538
+
539
+
540
+
541
+
542
+ <span class="summary_desc"><div class='inline'>
543
+ <p>----------------------------------------------------------------------------------------.</p>
544
+ </div></span>
545
+
546
+ </li>
547
+
548
+
549
+ <li class="public ">
550
+ <span class="summary_signature">
551
+
552
+ <a href="#md-instance_method" title="#md (instance method)">- (Object) <strong>md</strong>(value) </a>
553
+
554
+
555
+
556
+ </span>
557
+
558
+
559
+
560
+
561
+
562
+
563
+
564
+
565
+
566
+ <span class="summary_desc"><div class='inline'></div></span>
567
+
568
+ </li>
569
+
570
+
571
+ <li class="public ">
572
+ <span class="summary_signature">
573
+
574
+ <a href="#method_missing-instance_method" title="#method_missing (instance method)">- (Object) <strong>method_missing</strong>(symbol, *args) </a>
575
+
576
+
577
+
578
+ </span>
579
+
580
+
581
+
582
+
583
+
584
+
585
+
586
+
587
+
588
+ <span class="summary_desc"><div class='inline'>
589
+ <p>----------------------------------------------------------------------------------------.</p>
590
+ </div></span>
591
+
592
+ </li>
593
+
594
+
595
+ <li class="public ">
596
+ <span class="summary_signature">
597
+
598
+ <a href="#month__abb-instance_method" title="#month__abb (instance method)">- (Object) <strong>month__abb</strong> </a>
599
+
600
+
601
+
602
+ </span>
603
+
604
+
605
+
606
+
607
+
608
+
609
+
610
+
611
+
612
+ <span class="summary_desc"><div class='inline'></div></span>
613
+
614
+ </li>
615
+
616
+
617
+ <li class="public ">
618
+ <span class="summary_signature">
619
+
620
+ <a href="#month__name-instance_method" title="#month__name (instance method)">- (Object) <strong>month__name</strong> </a>
621
+
622
+
623
+
624
+ </span>
625
+
626
+
627
+
628
+
629
+
630
+
631
+
632
+
633
+
634
+ <span class="summary_desc"><div class='inline'></div></span>
635
+
636
+ </li>
637
+
638
+
639
+ <li class="public ">
640
+ <span class="summary_signature">
641
+
642
+ <a href="#na%3F-instance_method" title="#na? (instance method)">- (Boolean) <strong>na?</strong>(x) </a>
643
+
644
+
645
+
646
+ </span>
647
+
648
+
649
+
650
+
651
+
652
+
653
+
654
+
655
+
656
+ <span class="summary_desc"><div class='inline'>
657
+ <p>----------------------------------------------------------------------------------------
658
+ The integer constant used to designate elements or values that are missing
659
+ in the statistical sense, or literally "Not Available".</p>
660
+ </div></span>
661
+
662
+ </li>
663
+
664
+
665
+ <li class="public ">
666
+ <span class="summary_signature">
667
+
668
+ <a href="#nan%3F-instance_method" title="#nan? (instance method)">- (Boolean) <strong>nan?</strong>(x) </a>
669
+
670
+
671
+
672
+ </span>
673
+
674
+
675
+
676
+
677
+
678
+
679
+
680
+
681
+
682
+ <span class="summary_desc"><div class='inline'>
683
+ <p>----------------------------------------------------------------------------------------.</p>
684
+ </div></span>
685
+
686
+ </li>
687
+
688
+
689
+ <li class="public ">
690
+ <span class="summary_signature">
691
+
692
+ <a href="#parse-instance_method" title="#parse (instance method)">- (Object) <strong>parse</strong>(*args) </a>
693
+
694
+
695
+
696
+ </span>
697
+
698
+
699
+
700
+
701
+
702
+
703
+
704
+
705
+
706
+ <span class="summary_desc"><div class='inline'>
707
+ <p>----------------------------------------------------------------------------------------.</p>
708
+ </div></span>
709
+
710
+ </li>
711
+
712
+
713
+ <li class="public ">
714
+ <span class="summary_signature">
715
+
716
+ <a href="#pi-instance_method" title="#pi (instance method)">- (Object) <strong>pi</strong> </a>
717
+
718
+
719
+
720
+ </span>
721
+
722
+
723
+
724
+
725
+
726
+
727
+
728
+
729
+
730
+ <span class="summary_desc"><div class='inline'>
731
+ <p>----------------------------------------------------------------------------------------
732
+ R built-in constants
733
+ ----------------------------------------------------------------------------------------.</p>
734
+ </div></span>
735
+
736
+ </li>
737
+
738
+
739
+ <li class="public ">
740
+ <span class="summary_signature">
741
+
742
+ <a href="#pull-instance_method" title="#pull (instance method)">- (Object) <strong>pull</strong>(name) </a>
743
+
744
+
745
+
746
+ </span>
747
+
748
+
749
+
750
+
751
+
752
+
753
+
754
+
755
+
756
+ <span class="summary_desc"><div class='inline'>
757
+ <p>----------------------------------------------------------------------------------------.</p>
758
+ </div></span>
759
+
760
+ </li>
761
+
762
+
763
+ </ul>
764
+
765
+
766
+ <div id="constructor_details" class="method_details_list">
767
+ <h2>Constructor Details</h2>
768
+
769
+ <div class="method_details first">
770
+ <h3 class="signature first" id="initialize-instance_method">
771
+
772
+ - (<tt><span class='object_link'><a href="" title="Renjin (class)">Renjin</a></span></tt>) <strong>initialize</strong>
773
+
774
+
775
+
776
+
777
+
778
+ </h3><div class="docstring">
779
+ <div class="discussion">
780
+ <hr>
781
+
782
+ <p>R is invoked within a Ruby script (or the interactive "irb" prompt denoted
783
+ &gt;&gt;) using:</p>
784
+
785
+ <pre class="code ruby"><code class="ruby">&gt;&gt; require &quot;scicom&quot;
786
+ </code></pre>
787
+
788
+ <p>The previous statement reads the definition of the RinRuby class into the
789
+ current Ruby interpreter and creates an instance of the RinRuby class
790
+ named R. There is a second method for starting an instance of R which
791
+ allows the user to use any name for the instance, in this case myr:</p>
792
+
793
+ <pre class="code ruby"><code class="ruby">&gt;&gt; require &quot;scicom&quot;
794
+ &gt;&gt; myr = RinRuby.new
795
+ &gt;&gt; myr.eval &quot;rnorm(1)&quot;
796
+ </code></pre>
797
+
798
+ <p>Any number of independent instances of R can be created in this way.</p>
799
+ <hr>
800
+
801
+
802
+ </div>
803
+ </div>
804
+ <div class="tags">
805
+
806
+
807
+ </div><table class="source_code">
808
+ <tr>
809
+ <td>
810
+ <pre class="lines">
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+
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+
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+ 81
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+ 82
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+ 83
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+ 84
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+ 85
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+ 86
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+ 100
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+ 101
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+ 102
835
+ 103</pre>
836
+ </td>
837
+ <td>
838
+ <pre class="code"><span class="info file"># File 'lib/JRubyR/renjin.rb', line 81</span>
839
+
840
+ <span class='kw'>def</span> <span class='id identifier rubyid_initialize'>initialize</span>
841
+
842
+ <span class='ivar'>@platform</span> <span class='op'>=</span>
843
+ <span class='kw'>case</span> <span class='const'>RUBY_PLATFORM</span>
844
+ <span class='kw'>when</span> <span class='tstring'><span class='regexp_beg'>/</span><span class='tstring_content'>mswin</span><span class='regexp_end'>/</span></span> <span class='kw'>then</span> <span class='tstring'><span class='tstring_beg'>'</span><span class='tstring_content'>windows</span><span class='tstring_end'>'</span></span>
845
+ <span class='kw'>when</span> <span class='tstring'><span class='regexp_beg'>/</span><span class='tstring_content'>mingw</span><span class='regexp_end'>/</span></span> <span class='kw'>then</span> <span class='tstring'><span class='tstring_beg'>'</span><span class='tstring_content'>windows</span><span class='tstring_end'>'</span></span>
846
+ <span class='kw'>when</span> <span class='tstring'><span class='regexp_beg'>/</span><span class='tstring_content'>bccwin</span><span class='regexp_end'>/</span></span> <span class='kw'>then</span> <span class='tstring'><span class='tstring_beg'>'</span><span class='tstring_content'>windows</span><span class='tstring_end'>'</span></span>
847
+ <span class='kw'>when</span> <span class='tstring'><span class='regexp_beg'>/</span><span class='tstring_content'>cygwin</span><span class='regexp_end'>/</span></span> <span class='kw'>then</span> <span class='tstring'><span class='tstring_beg'>'</span><span class='tstring_content'>windows-cygwin</span><span class='tstring_end'>'</span></span>
848
+ <span class='kw'>when</span> <span class='tstring'><span class='regexp_beg'>/</span><span class='tstring_content'>java</span><span class='regexp_end'>/</span></span>
849
+ <span class='id identifier rubyid_require'>require</span> <span class='tstring'><span class='tstring_beg'>'</span><span class='tstring_content'>java</span><span class='tstring_end'>'</span></span> <span class='comment'>#:nodoc:
850
+ </span> <span class='kw'>if</span> <span class='id identifier rubyid_java'>java</span><span class='period'>.</span><span class='id identifier rubyid_lang'>lang</span><span class='period'>.</span><span class='const'>System</span><span class='period'>.</span><span class='id identifier rubyid_getProperty'>getProperty</span><span class='lparen'>(</span><span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>os.name</span><span class='tstring_end'>&quot;</span></span><span class='rparen'>)</span> <span class='op'>=~</span> <span class='tstring'><span class='regexp_beg'>/</span><span class='tstring_content'>[Ww]indows</span><span class='regexp_end'>/</span></span>
851
+ <span class='tstring'><span class='tstring_beg'>'</span><span class='tstring_content'>windows-java</span><span class='tstring_end'>'</span></span>
852
+ <span class='kw'>else</span>
853
+ <span class='tstring'><span class='tstring_beg'>'</span><span class='tstring_content'>default-java</span><span class='tstring_end'>'</span></span>
854
+ <span class='kw'>end</span>
855
+ <span class='kw'>else</span> <span class='tstring'><span class='tstring_beg'>'</span><span class='tstring_content'>default</span><span class='tstring_end'>'</span></span>
856
+ <span class='kw'>end</span>
857
+
858
+ <span class='id identifier rubyid_factory'>factory</span> <span class='op'>=</span> <span class='const'>Java</span><span class='op'>::</span><span class='const'>JavaxScript</span><span class='period'>.</span><span class='const'>ScriptEngineManager</span><span class='period'>.</span><span class='id identifier rubyid_new'>new</span><span class='lparen'>(</span><span class='rparen'>)</span>
859
+ <span class='ivar'>@engine</span> <span class='op'>=</span> <span class='id identifier rubyid_factory'>factory</span><span class='period'>.</span><span class='id identifier rubyid_getEngineByName'>getEngineByName</span><span class='lparen'>(</span><span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>Renjin</span><span class='tstring_end'>&quot;</span></span><span class='rparen'>)</span>
860
+ <span class='kw'>super</span>
861
+
862
+ <span class='kw'>end</span></pre>
863
+ </td>
864
+ </tr>
865
+ </table>
866
+ </div>
867
+
868
+ </div>
869
+ <div id="method_missing_details" class="method_details_list">
870
+ <h2>Dynamic Method Handling</h2>
871
+ <p class="notice this">
872
+ This class handles dynamic methods through the <tt>method_missing</tt> method
873
+
874
+ </p>
875
+
876
+ <div class="method_details first">
877
+ <h3 class="signature first" id="method_missing-instance_method">
878
+
879
+ - (<tt>Object</tt>) <strong>method_missing</strong>(symbol, *args)
880
+
881
+
882
+
883
+
884
+
885
+ </h3><div class="docstring">
886
+ <div class="discussion">
887
+ <hr>
888
+ <hr>
889
+
890
+
891
+ </div>
892
+ </div>
893
+ <div class="tags">
894
+
895
+
896
+ </div><table class="source_code">
897
+ <tr>
898
+ <td>
899
+ <pre class="lines">
900
+
901
+
902
+ 136
903
+ 137
904
+ 138
905
+ 139
906
+ 140
907
+ 141
908
+ 142
909
+ 143
910
+ 144
911
+ 145
912
+ 146
913
+ 147
914
+ 148
915
+ 149
916
+ 150
917
+ 151
918
+ 152
919
+ 153
920
+ 154
921
+ 155
922
+ 156
923
+ 157
924
+ 158
925
+ 159
926
+ 160
927
+ 161
928
+ 162</pre>
929
+ </td>
930
+ <td>
931
+ <pre class="code"><span class="info file"># File 'lib/JRubyR/renjin.rb', line 136</span>
932
+
933
+ <span class='kw'>def</span> <span class='id identifier rubyid_method_missing'>method_missing</span><span class='lparen'>(</span><span class='id identifier rubyid_symbol'>symbol</span><span class='comma'>,</span> <span class='op'>*</span><span class='id identifier rubyid_args'>args</span><span class='rparen'>)</span>
934
+
935
+ <span class='id identifier rubyid_name'>name</span> <span class='op'>=</span> <span class='id identifier rubyid_symbol'>symbol</span><span class='period'>.</span><span class='id identifier rubyid_id2name'>id2name</span>
936
+ <span class='id identifier rubyid_name'>name</span><span class='period'>.</span><span class='id identifier rubyid_gsub!'>gsub!</span><span class='lparen'>(</span><span class='tstring'><span class='regexp_beg'>/</span><span class='tstring_content'>__</span><span class='regexp_end'>/</span></span><span class='comma'>,</span><span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>.</span><span class='tstring_end'>&quot;</span></span><span class='rparen'>)</span>
937
+ <span class='comment'># Method 'rclass' is a substitute for R method 'class'. Needed, as 'class' is also
938
+ </span> <span class='comment'># a Ruby method on an object
939
+ </span> <span class='id identifier rubyid_name'>name</span><span class='period'>.</span><span class='id identifier rubyid_gsub!'>gsub!</span><span class='lparen'>(</span><span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>rclass</span><span class='tstring_end'>&quot;</span></span><span class='comma'>,</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>class</span><span class='tstring_end'>&quot;</span></span><span class='rparen'>)</span>
940
+
941
+ <span class='kw'>if</span> <span class='id identifier rubyid_name'>name</span> <span class='op'>=~</span> <span class='tstring'><span class='regexp_beg'>/</span><span class='tstring_content'>(.*)=$</span><span class='regexp_end'>/</span></span>
942
+ <span class='kw'>super</span> <span class='kw'>if</span> <span class='id identifier rubyid_args'>args</span><span class='period'>.</span><span class='id identifier rubyid_length'>length</span> <span class='op'>!=</span> <span class='int'>1</span>
943
+ <span class='id identifier rubyid_ret'>ret</span> <span class='op'>=</span> <span class='id identifier rubyid_assign'>assign</span><span class='lparen'>(</span><span class='backref'>$1</span><span class='comma'>,</span><span class='id identifier rubyid_args'>args</span><span class='lbracket'>[</span><span class='int'>0</span><span class='rbracket'>]</span><span class='rparen'>)</span>
944
+ <span class='kw'>else</span>
945
+ <span class='comment'># super if args.length != 0
946
+ </span> <span class='kw'>if</span> <span class='lparen'>(</span><span class='id identifier rubyid_args'>args</span><span class='period'>.</span><span class='id identifier rubyid_length'>length</span> <span class='op'>==</span> <span class='int'>0</span><span class='rparen'>)</span>
947
+ <span class='comment'># is_var = false
948
+ </span> <span class='comment'># Try to see if name is a variable or a method.
949
+ </span> <span class='id identifier rubyid_ret'>ret</span> <span class='op'>=</span> <span class='lparen'>(</span><span class='id identifier rubyid_eval'>eval</span><span class='lparen'>(</span><span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>\&quot;</span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_name'>name</span><span class='rbrace'>}</span><span class='tstring_content'>\&quot; %in% ls()</span><span class='tstring_end'>&quot;</span></span><span class='rparen'>)</span><span class='period'>.</span><span class='id identifier rubyid_gt'>gt</span><span class='rparen'>)</span><span class='op'>?</span> <span class='id identifier rubyid_eval'>eval</span><span class='lparen'>(</span><span class='tstring'><span class='tstring_beg'>&quot;</span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_name'>name</span><span class='rbrace'>}</span><span class='tstring_end'>&quot;</span></span><span class='rparen'>)</span> <span class='op'>:</span> <span class='id identifier rubyid_eval'>eval</span><span class='lparen'>(</span><span class='tstring'><span class='tstring_beg'>&quot;</span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_name'>name</span><span class='rbrace'>}</span><span class='tstring_content'>()</span><span class='tstring_end'>&quot;</span></span><span class='rparen'>)</span>
950
+ <span class='kw'>else</span>
951
+ <span class='id identifier rubyid_params'>params</span> <span class='op'>=</span> <span class='id identifier rubyid_parse'>parse</span><span class='lparen'>(</span><span class='op'>*</span><span class='id identifier rubyid_args'>args</span><span class='rparen'>)</span>
952
+ <span class='comment'># p &quot;#{name}(#{params})&quot;
953
+ </span> <span class='id identifier rubyid_ret'>ret</span> <span class='op'>=</span> <span class='id identifier rubyid_eval'>eval</span><span class='lparen'>(</span><span class='tstring'><span class='tstring_beg'>&quot;</span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_name'>name</span><span class='rbrace'>}</span><span class='tstring_content'>(</span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_params'>params</span><span class='rbrace'>}</span><span class='tstring_content'>)</span><span class='tstring_end'>&quot;</span></span><span class='rparen'>)</span>
954
+ <span class='kw'>end</span>
955
+ <span class='kw'>end</span>
956
+
957
+ <span class='id identifier rubyid_ret'>ret</span>
958
+
959
+ <span class='kw'>end</span></pre>
960
+ </td>
961
+ </tr>
962
+ </table>
963
+ </div>
964
+
965
+ </div>
966
+
967
+ <div id="class_attr_details" class="attr_details">
968
+ <h2>Class Attribute Details</h2>
969
+
970
+
971
+ <span id="stack=-class_method"></span>
972
+ <div class="method_details first">
973
+ <h3 class="signature first" id="stack-class_method">
974
+
975
+ + (<tt>Object</tt>) <strong>stack</strong>
976
+
977
+
978
+
979
+
980
+
981
+ </h3><div class="docstring">
982
+ <div class="discussion">
983
+
984
+ <p>Returns the value of attribute stack</p>
985
+
986
+
987
+ </div>
988
+ </div>
989
+ <div class="tags">
990
+
991
+
992
+ </div><table class="source_code">
993
+ <tr>
994
+ <td>
995
+ <pre class="lines">
996
+
997
+
998
+ 52
999
+ 53
1000
+ 54</pre>
1001
+ </td>
1002
+ <td>
1003
+ <pre class="code"><span class="info file"># File 'lib/JRubyR/renjin.rb', line 52</span>
1004
+
1005
+ <span class='kw'>def</span> <span class='id identifier rubyid_stack'>stack</span>
1006
+ <span class='ivar'>@stack</span>
1007
+ <span class='kw'>end</span></pre>
1008
+ </td>
1009
+ </tr>
1010
+ </table>
1011
+ </div>
1012
+
1013
+ </div>
1014
+
1015
+ <div id="instance_attr_details" class="attr_details">
1016
+ <h2>Instance Attribute Details</h2>
1017
+
1018
+
1019
+ <span id=""></span>
1020
+ <div class="method_details first">
1021
+ <h3 class="signature first" id="engine-instance_method">
1022
+
1023
+ - (<tt>Object</tt>) <strong>engine</strong> <span class="extras">(readonly)</span>
1024
+
1025
+
1026
+
1027
+
1028
+
1029
+ </h3><div class="docstring">
1030
+ <div class="discussion">
1031
+ <hr>
1032
+ <hr>
1033
+
1034
+
1035
+ </div>
1036
+ </div>
1037
+ <div class="tags">
1038
+
1039
+
1040
+ </div><table class="source_code">
1041
+ <tr>
1042
+ <td>
1043
+ <pre class="lines">
1044
+
1045
+
1046
+ 59
1047
+ 60
1048
+ 61</pre>
1049
+ </td>
1050
+ <td>
1051
+ <pre class="code"><span class="info file"># File 'lib/JRubyR/renjin.rb', line 59</span>
1052
+
1053
+ <span class='kw'>def</span> <span class='id identifier rubyid_engine'>engine</span>
1054
+ <span class='ivar'>@engine</span>
1055
+ <span class='kw'>end</span></pre>
1056
+ </td>
1057
+ </tr>
1058
+ </table>
1059
+ </div>
1060
+
1061
+ </div>
1062
+
1063
+
1064
+ <div id="instance_method_details" class="method_details_list">
1065
+ <h2>Instance Method Details</h2>
1066
+
1067
+
1068
+ <div class="method_details first">
1069
+ <h3 class="signature first" id="assign-instance_method">
1070
+
1071
+ - (<tt>Object</tt>) <strong>assign</strong>(name, value)
1072
+
1073
+
1074
+
1075
+
1076
+
1077
+ </h3><div class="docstring">
1078
+ <div class="discussion">
1079
+ <hr>
1080
+
1081
+ <p>Data is copied from Ruby to R using the assign method or a short-hand
1082
+ equivalent. For example:</p>
1083
+
1084
+ <pre class="code ruby"><code class="ruby">&gt;&gt; names = [&quot;Lisa&quot;,&quot;Teasha&quot;,&quot;Aaron&quot;,&quot;Thomas&quot;]
1085
+ &gt;&gt; R.assign &quot;people&quot;, names
1086
+ &gt;&gt; R.eval &quot;sort(people)&quot;</code></pre>
1087
+
1088
+ <p>produces the following :</p>
1089
+
1090
+ <pre class="code ruby"><code class="ruby">[1] &quot;Aaron&quot; &quot;Lisa&quot; &quot;Teasha&quot; &quot;Thomas&quot;</code></pre>
1091
+
1092
+ <p>The short-hand equivalent to the assign method is simply:</p>
1093
+
1094
+ <pre class="code ruby"><code class="ruby">&gt;&gt; R.people = names</code></pre>
1095
+
1096
+ <p>Some care is needed when using the short-hand of the assign method since
1097
+ the label (i.e., people in this case) must be a valid method name in Ruby.
1098
+ For example, R.copy.of.names = names will not work, but R.copy_of_names =
1099
+ names is permissible.</p>
1100
+
1101
+ <p>The assign method supports Ruby variables of type Fixnum (i.e., integer),
1102
+ Bignum (i.e., integer), Float (i.e., double), String, and arrays of one of
1103
+ those three fundamental types. Note that Fixnum or Bignum values that
1104
+ exceed the capacity of R’s integers are silently converted to doubles.
1105
+ Data in other formats must be coerced when copying to R.</p>
1106
+
1107
+ <p><strong>Parameters that can be passed to the assign method:</strong></p>
1108
+ <ul><li>
1109
+ <p>name: The name of the variable desired in R.</p>
1110
+ </li><li>
1111
+ <p>value: The value the R variable should have.</p>
1112
+ </li></ul>
1113
+
1114
+ <p>The assign method is an alternative to the simplified method, with some
1115
+ additional flexibility. When using the simplified method, the parameters
1116
+ of name and value are automatically used, in other words:</p>
1117
+
1118
+ <pre class="code ruby"><code class="ruby">&gt;&gt; R.test = 144</code></pre>
1119
+
1120
+ <p>is the same as:</p>
1121
+
1122
+ <pre class="code ruby"><code class="ruby">&gt;&gt; R.assign(&quot;test&quot;,144)</code></pre>
1123
+
1124
+ <p>Of course it would be confusing to use the shorthand notation to assign a
1125
+ variable named eval, echo, or any other already defined function. RinRuby
1126
+ would assume you were calling the function, rather than trying to assign a
1127
+ variable.</p>
1128
+
1129
+ <p>When assigning an array containing differing types of variables, RinRuby
1130
+ will follow R’s conversion conventions. An array that contains any Strings
1131
+ will result in a character vector in R. If the array does not contain any
1132
+ Strings, but it does contain a Float or a large integer (in absolute
1133
+ value), then the result will be a numeric vector of Doubles in R. If there
1134
+ are only integers that are suffciently small (in absolute value), then the
1135
+ result will be a numeric vector of integers in R.</p>
1136
+ <hr>
1137
+
1138
+
1139
+ </div>
1140
+ </div>
1141
+ <div class="tags">
1142
+
1143
+
1144
+ </div><table class="source_code">
1145
+ <tr>
1146
+ <td>
1147
+ <pre class="lines">
1148
+
1149
+
1150
+ 344
1151
+ 345
1152
+ 346
1153
+ 347
1154
+ 348
1155
+ 349
1156
+ 350
1157
+ 351
1158
+ 352
1159
+ 353
1160
+ 354
1161
+ 355
1162
+ 356
1163
+ 357
1164
+ 358
1165
+ 359
1166
+ 360
1167
+ 361
1168
+ 362</pre>
1169
+ </td>
1170
+ <td>
1171
+ <pre class="code"><span class="info file"># File 'lib/JRubyR/renjin.rb', line 344</span>
1172
+
1173
+ <span class='kw'>def</span> <span class='id identifier rubyid_assign'>assign</span><span class='lparen'>(</span><span class='id identifier rubyid_name'>name</span><span class='comma'>,</span> <span class='id identifier rubyid_value'>value</span><span class='rparen'>)</span>
1174
+
1175
+ <span class='id identifier rubyid_original_value'>original_value</span> <span class='op'>=</span> <span class='id identifier rubyid_value'>value</span>
1176
+
1177
+ <span class='kw'>if</span> <span class='lparen'>(</span><span class='lparen'>(</span><span class='id identifier rubyid_value'>value</span><span class='period'>.</span><span class='id identifier rubyid_is_a?'>is_a?</span> <span class='const'>MDArray</span><span class='rparen'>)</span> <span class='op'>||</span> <span class='lparen'>(</span><span class='id identifier rubyid_value'>value</span><span class='period'>.</span><span class='id identifier rubyid_is_a?'>is_a?</span> <span class='const'>RubySexp</span><span class='rparen'>)</span><span class='rparen'>)</span>
1178
+ <span class='kw'>if</span> <span class='lparen'>(</span><span class='id identifier rubyid_value'>value</span><span class='period'>.</span><span class='id identifier rubyid_sexp'>sexp</span> <span class='op'>!=</span> <span class='kw'>nil</span><span class='rparen'>)</span>
1179
+ <span class='comment'># MDArray already represented in R
1180
+ </span> <span class='id identifier rubyid_value'>value</span> <span class='op'>=</span> <span class='id identifier rubyid_value'>value</span><span class='period'>.</span><span class='id identifier rubyid_sexp'>sexp</span>
1181
+ <span class='kw'>else</span>
1182
+ <span class='id identifier rubyid_value'>value</span> <span class='op'>=</span> <span class='id identifier rubyid_build_vector'>build_vector</span><span class='lparen'>(</span><span class='id identifier rubyid_value'>value</span><span class='rparen'>)</span>
1183
+ <span class='kw'>end</span>
1184
+ <span class='kw'>elsif</span> <span class='lparen'>(</span><span class='id identifier rubyid_value'>value</span> <span class='op'>==</span> <span class='kw'>nil</span><span class='rparen'>)</span>
1185
+ <span class='id identifier rubyid_value'>value</span> <span class='op'>=</span> <span class='const'>NULL</span>
1186
+ <span class='kw'>end</span>
1187
+
1188
+ <span class='ivar'>@engine</span><span class='period'>.</span><span class='id identifier rubyid_put'>put</span><span class='lparen'>(</span><span class='id identifier rubyid_name'>name</span><span class='comma'>,</span> <span class='id identifier rubyid_value'>value</span><span class='rparen'>)</span>
1189
+ <span class='id identifier rubyid_original_value'>original_value</span>
1190
+
1191
+ <span class='kw'>end</span></pre>
1192
+ </td>
1193
+ </tr>
1194
+ </table>
1195
+ </div>
1196
+
1197
+ <div class="method_details ">
1198
+ <h3 class="signature " id="build_vector-instance_method">
1199
+
1200
+ - (<tt>Object</tt>) <strong>build_vector</strong>(mdarray)
1201
+
1202
+
1203
+
1204
+
1205
+
1206
+ </h3><div class="docstring">
1207
+ <div class="discussion">
1208
+ <hr>
1209
+
1210
+ <p>Builds a Renjin vector from an MDArray. Should be private, but public for
1211
+ testing.</p>
1212
+ <hr>
1213
+
1214
+
1215
+ </div>
1216
+ </div>
1217
+ <div class="tags">
1218
+
1219
+
1220
+ </div><table class="source_code">
1221
+ <tr>
1222
+ <td>
1223
+ <pre class="lines">
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+
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+
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+ 434
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+ 435
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+ 442
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+ 466
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+ 467
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+ 468
1261
+ 469</pre>
1262
+ </td>
1263
+ <td>
1264
+ <pre class="code"><span class="info file"># File 'lib/JRubyR/renjin.rb', line 434</span>
1265
+
1266
+ <span class='kw'>def</span> <span class='id identifier rubyid_build_vector'>build_vector</span><span class='lparen'>(</span><span class='id identifier rubyid_mdarray'>mdarray</span><span class='rparen'>)</span>
1267
+
1268
+ <span class='id identifier rubyid_shape'>shape</span> <span class='op'>=</span> <span class='id identifier rubyid_mdarray'>mdarray</span><span class='period'>.</span><span class='id identifier rubyid_shape'>shape</span>
1269
+ <span class='comment'># index = mdarray.nc_array.getIndex()
1270
+ </span> <span class='comment'># index = MDArray.index_factory(shape)
1271
+ </span> <span class='comment'># representation of shape in R is different from shape in MDArray. Convert MDArray
1272
+ </span> <span class='comment'># shape to R shape.
1273
+ </span> <span class='kw'>if</span> <span class='lparen'>(</span><span class='id identifier rubyid_shape'>shape</span><span class='period'>.</span><span class='id identifier rubyid_size'>size</span> <span class='op'>&gt;</span> <span class='int'>2</span><span class='rparen'>)</span>
1274
+ <span class='id identifier rubyid_shape'>shape</span><span class='period'>.</span><span class='id identifier rubyid_reverse!'>reverse!</span>
1275
+ <span class='id identifier rubyid_shape'>shape</span><span class='lbracket'>[</span><span class='int'>0</span><span class='rbracket'>]</span><span class='comma'>,</span> <span class='id identifier rubyid_shape'>shape</span><span class='lbracket'>[</span><span class='int'>1</span><span class='rbracket'>]</span> <span class='op'>=</span> <span class='id identifier rubyid_shape'>shape</span><span class='lbracket'>[</span><span class='int'>1</span><span class='rbracket'>]</span><span class='comma'>,</span> <span class='id identifier rubyid_shape'>shape</span><span class='lbracket'>[</span><span class='int'>0</span><span class='rbracket'>]</span>
1276
+ <span class='kw'>end</span>
1277
+
1278
+ <span class='comment'># AttributeMap attributes = AttributeMap.builder().setDim(new IntVector(dim)).build();
1279
+ </span> <span class='id identifier rubyid_attributes'>attributes</span> <span class='op'>=</span> <span class='const'>Java</span><span class='op'>::</span><span class='const'>OrgRenjinSexp</span><span class='op'>::</span><span class='const'>AttributeMap</span><span class='period'>.</span><span class='id identifier rubyid_builder'>builder</span><span class='lparen'>(</span><span class='rparen'>)</span><span class='period'>
1280
+ </span><span class='id identifier rubyid_ .setDim'> .setDim</span><span class='lparen'>(</span><span class='const'>Java</span><span class='op'>::</span><span class='const'>OrgRenjinSexp</span><span class='op'>::</span><span class='const'>IntArrayVector</span><span class='period'>.</span><span class='id identifier rubyid_new'>new</span><span class='lparen'>(</span><span class='op'>*</span><span class='lparen'>(</span><span class='id identifier rubyid_shape'>shape</span><span class='rparen'>)</span><span class='rparen'>)</span><span class='rparen'>)</span><span class='period'>.</span><span class='id identifier rubyid_build'>build</span><span class='lparen'>(</span><span class='rparen'>)</span>
1281
+
1282
+ <span class='comment'># vector = Java::RbScicom::MDDoubleVector.new(mdarray.nc_array, attributes, index,
1283
+ </span> <span class='comment'># index.stride)
1284
+ </span>
1285
+ <span class='kw'>case</span> <span class='id identifier rubyid_mdarray'>mdarray</span><span class='period'>.</span><span class='id identifier rubyid_type'>type</span>
1286
+ <span class='kw'>when</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>int</span><span class='tstring_end'>&quot;</span></span>
1287
+ <span class='id identifier rubyid_vector'>vector</span> <span class='op'>=</span> <span class='const'>Java</span><span class='op'>::</span><span class='const'>RbScicom</span><span class='op'>::</span><span class='const'>MDIntVector</span><span class='period'>.</span><span class='id identifier rubyid_factory'>factory</span><span class='lparen'>(</span><span class='id identifier rubyid_mdarray'>mdarray</span><span class='period'>.</span><span class='id identifier rubyid_nc_array'>nc_array</span><span class='comma'>,</span> <span class='id identifier rubyid_attributes'>attributes</span><span class='rparen'>)</span>
1288
+ <span class='kw'>when</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>double</span><span class='tstring_end'>&quot;</span></span>
1289
+ <span class='id identifier rubyid_vector'>vector</span> <span class='op'>=</span> <span class='const'>Java</span><span class='op'>::</span><span class='const'>RbScicom</span><span class='op'>::</span><span class='const'>MDDoubleVector</span><span class='period'>.</span><span class='id identifier rubyid_factory'>factory</span><span class='lparen'>(</span><span class='id identifier rubyid_mdarray'>mdarray</span><span class='period'>.</span><span class='id identifier rubyid_nc_array'>nc_array</span><span class='comma'>,</span> <span class='id identifier rubyid_attributes'>attributes</span><span class='rparen'>)</span>
1290
+ <span class='kw'>when</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>byte</span><span class='tstring_end'>&quot;</span></span>
1291
+ <span class='id identifier rubyid_vector'>vector</span> <span class='op'>=</span> <span class='const'>Java</span><span class='op'>::</span><span class='const'>RbScicom</span><span class='op'>::</span><span class='const'>MDLogicalVector</span><span class='period'>.</span><span class='id identifier rubyid_factory'>factory</span><span class='lparen'>(</span><span class='id identifier rubyid_mdarray'>mdarray</span><span class='period'>.</span><span class='id identifier rubyid_nc_array'>nc_array</span><span class='comma'>,</span> <span class='id identifier rubyid_attributes'>attributes</span><span class='rparen'>)</span>
1292
+ <span class='kw'>when</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>string</span><span class='tstring_end'>&quot;</span></span>
1293
+ <span class='id identifier rubyid_vector'>vector</span> <span class='op'>=</span> <span class='const'>Java</span><span class='op'>::</span><span class='const'>RbScicom</span><span class='op'>::</span><span class='const'>MDStringVector</span><span class='period'>.</span><span class='id identifier rubyid_factory'>factory</span><span class='lparen'>(</span><span class='id identifier rubyid_mdarray'>mdarray</span><span class='period'>.</span><span class='id identifier rubyid_nc_array'>nc_array</span><span class='comma'>,</span> <span class='id identifier rubyid_attributes'>attributes</span><span class='rparen'>)</span>
1294
+ <span class='kw'>when</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>boolean</span><span class='tstring_end'>&quot;</span></span>
1295
+ <span class='id identifier rubyid_raise'>raise</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>Boolean vectors cannot be converted to R vectors. If you are trying to \
1296
+ convert to an R Logical object, use a :byte MDArray</span><span class='tstring_end'>&quot;</span></span>
1297
+ <span class='kw'>else</span>
1298
+ <span class='id identifier rubyid_raise'>raise</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>Cannot convert MDArray </span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_mdarray'>mdarray</span><span class='period'>.</span><span class='id identifier rubyid_type'>type</span><span class='rbrace'>}</span><span class='tstring_content'> to R vector</span><span class='tstring_end'>&quot;</span></span>
1299
+ <span class='kw'>end</span>
1300
+
1301
+ <span class='kw'>end</span></pre>
1302
+ </td>
1303
+ </tr>
1304
+ </table>
1305
+ </div>
1306
+
1307
+ <div class="method_details ">
1308
+ <h3 class="signature " id="d-instance_method">
1309
+
1310
+ - (<tt>Object</tt>) <strong>d</strong>(value)
1311
+
1312
+
1313
+
1314
+
1315
+
1316
+ </h3><table class="source_code">
1317
+ <tr>
1318
+ <td>
1319
+ <pre class="lines">
1320
+
1321
+
1322
+ 192
1323
+ 193
1324
+ 194</pre>
1325
+ </td>
1326
+ <td>
1327
+ <pre class="code"><span class="info file"># File 'lib/JRubyR/renjin.rb', line 192</span>
1328
+
1329
+ <span class='kw'>def</span> <span class='id identifier rubyid_d'>d</span><span class='lparen'>(</span><span class='id identifier rubyid_value'>value</span><span class='rparen'>)</span>
1330
+ <span class='id identifier rubyid_eval'>eval</span><span class='lparen'>(</span><span class='tstring'><span class='tstring_beg'>&quot;</span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_value'>value</span><span class='rbrace'>}</span><span class='tstring_end'>&quot;</span></span><span class='rparen'>)</span>
1331
+ <span class='kw'>end</span></pre>
1332
+ </td>
1333
+ </tr>
1334
+ </table>
1335
+ </div>
1336
+
1337
+ <div class="method_details ">
1338
+ <h3 class="signature " id="direct_eval-instance_method">
1339
+
1340
+ - (<tt>Object</tt>) <strong>direct_eval</strong>(expression)
1341
+
1342
+
1343
+
1344
+
1345
+
1346
+ </h3><div class="docstring">
1347
+ <div class="discussion">
1348
+ <hr>
1349
+
1350
+ <p>Evaluates an expression but does not wrap the return in a RubySexp. Needed
1351
+ for intermediate evaluation done by internal methods. In principle,
1352
+ should not be called by users.</p>
1353
+ <hr>
1354
+
1355
+
1356
+ </div>
1357
+ </div>
1358
+ <div class="tags">
1359
+
1360
+
1361
+ </div><table class="source_code">
1362
+ <tr>
1363
+ <td>
1364
+ <pre class="lines">
1365
+
1366
+
1367
+ 228
1368
+ 229
1369
+ 230
1370
+ 231
1371
+ 232
1372
+ 233
1373
+ 234
1374
+ 235
1375
+ 236
1376
+ 237
1377
+ 238
1378
+ 239
1379
+ 240
1380
+ 241
1381
+ 242
1382
+ 243</pre>
1383
+ </td>
1384
+ <td>
1385
+ <pre class="code"><span class="info file"># File 'lib/JRubyR/renjin.rb', line 228</span>
1386
+
1387
+ <span class='kw'>def</span> <span class='id identifier rubyid_direct_eval'>direct_eval</span><span class='lparen'>(</span><span class='id identifier rubyid_expression'>expression</span><span class='rparen'>)</span>
1388
+ <span class='kw'>begin</span>
1389
+ <span class='id identifier rubyid_ret'>ret</span> <span class='op'>=</span> <span class='ivar'>@engine</span><span class='period'>.</span><span class='id identifier rubyid_eval'>eval</span><span class='lparen'>(</span><span class='id identifier rubyid_expression'>expression</span><span class='rparen'>)</span>
1390
+ <span class='kw'>rescue</span> <span class='const'>Java</span><span class='op'>::</span><span class='const'>OrgRenjinEval</span><span class='op'>::</span><span class='const'>EvalException</span> <span class='op'>=&gt;</span> <span class='id identifier rubyid_e'>e</span>
1391
+ <span class='id identifier rubyid_p'>p</span> <span class='id identifier rubyid_e'>e</span><span class='period'>.</span><span class='id identifier rubyid_message'>message</span>
1392
+ <span class='kw'>ensure</span>
1393
+ <span class='embdoc_beg'>=begin
1394
+ </span><span class='embdoc'> Renjin.stack.each do |sexp|
1395
+ </span><span class='embdoc'> sexp.destroy
1396
+ </span><span class='embdoc'> end
1397
+ </span><span class='embdoc_end'>=end
1398
+ </span> <span class='kw'>end</span>
1399
+
1400
+ <span class='id identifier rubyid_ret'>ret</span>
1401
+
1402
+ <span class='kw'>end</span></pre>
1403
+ </td>
1404
+ </tr>
1405
+ </table>
1406
+ </div>
1407
+
1408
+ <div class="method_details ">
1409
+ <h3 class="signature " id="eval-instance_method">
1410
+
1411
+ - (<tt>Object</tt>) <strong>eval</strong>(expression)
1412
+
1413
+
1414
+
1415
+
1416
+
1417
+ </h3><div class="docstring">
1418
+ <div class="discussion">
1419
+ <hr>
1420
+ <hr>
1421
+
1422
+
1423
+ </div>
1424
+ </div>
1425
+ <div class="tags">
1426
+
1427
+
1428
+ </div><table class="source_code">
1429
+ <tr>
1430
+ <td>
1431
+ <pre class="lines">
1432
+
1433
+
1434
+ 205
1435
+ 206
1436
+ 207
1437
+ 208
1438
+ 209
1439
+ 210
1440
+ 211
1441
+ 212
1442
+ 213
1443
+ 214
1444
+ 215
1445
+ 216
1446
+ 217
1447
+ 218
1448
+ 219
1449
+ 220</pre>
1450
+ </td>
1451
+ <td>
1452
+ <pre class="code"><span class="info file"># File 'lib/JRubyR/renjin.rb', line 205</span>
1453
+
1454
+ <span class='kw'>def</span> <span class='id identifier rubyid_eval'>eval</span><span class='lparen'>(</span><span class='id identifier rubyid_expression'>expression</span><span class='rparen'>)</span>
1455
+ <span class='kw'>begin</span>
1456
+ <span class='id identifier rubyid_ret'>ret</span> <span class='op'>=</span> <span class='const'>Renjin</span><span class='op'>::</span><span class='const'>RubySexp</span><span class='period'>.</span><span class='id identifier rubyid_build'>build</span><span class='lparen'>(</span><span class='ivar'>@engine</span><span class='period'>.</span><span class='id identifier rubyid_eval'>eval</span><span class='lparen'>(</span><span class='id identifier rubyid_expression'>expression</span><span class='rparen'>)</span><span class='rparen'>)</span>
1457
+ <span class='kw'>rescue</span> <span class='const'>Java</span><span class='op'>::</span><span class='const'>OrgRenjinEval</span><span class='op'>::</span><span class='const'>EvalException</span> <span class='op'>=&gt;</span> <span class='id identifier rubyid_e'>e</span>
1458
+ <span class='id identifier rubyid_p'>p</span> <span class='id identifier rubyid_e'>e</span><span class='period'>.</span><span class='id identifier rubyid_message'>message</span>
1459
+ <span class='kw'>rescue</span> <span class='const'>Java</span><span class='op'>::</span><span class='const'>OrgRenjinParser</span><span class='op'>::</span><span class='const'>ParseException</span> <span class='op'>=&gt;</span> <span class='id identifier rubyid_e'>e</span>
1460
+ <span class='id identifier rubyid_p'>p</span> <span class='id identifier rubyid_e'>e</span><span class='period'>.</span><span class='id identifier rubyid_message'>message</span>
1461
+ <span class='kw'>ensure</span>
1462
+ <span class='const'>Renjin</span><span class='period'>.</span><span class='id identifier rubyid_stack'>stack</span><span class='period'>.</span><span class='id identifier rubyid_each'>each</span> <span class='kw'>do</span> <span class='op'>|</span><span class='id identifier rubyid_sexp'>sexp</span><span class='op'>|</span>
1463
+ <span class='id identifier rubyid_sexp'>sexp</span><span class='period'>.</span><span class='id identifier rubyid_destroy'>destroy</span>
1464
+ <span class='kw'>end</span>
1465
+ <span class='kw'>end</span>
1466
+
1467
+ <span class='id identifier rubyid_ret'>ret</span>
1468
+
1469
+ <span class='kw'>end</span></pre>
1470
+ </td>
1471
+ </tr>
1472
+ </table>
1473
+ </div>
1474
+
1475
+ <div class="method_details ">
1476
+ <h3 class="signature " id="fassign-instance_method">
1477
+
1478
+ - (<tt>Object</tt>) <strong>fassign</strong>(sexp, function, value)
1479
+
1480
+
1481
+
1482
+
1483
+
1484
+ </h3><div class="docstring">
1485
+ <div class="discussion">
1486
+ <hr>
1487
+
1488
+ <p>function is either a function name alone represented by a ruby symbol or a
1489
+ hash with the function name and its arguments or indexes Ex:</p>
1490
+
1491
+ <pre class="code ruby"><code class="ruby"><span class='id identifier rubyid_fassign'>fassign</span><span class='lparen'>(</span><span class='id identifier rubyid_sexp'>sexp</span><span class='comma'>,</span> <span class='symbol'>:rowname</span><span class='comma'>,</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>x1</span><span class='tstring_end'>&quot;</span></span><span class='rparen'>)</span>
1492
+ <span class='id identifier rubyid_fassign'>fassign</span><span class='lparen'>(</span><span class='id identifier rubyid_sexp'>sexp</span><span class='comma'>,</span> <span class='lbrace'>{</span><span class='label'>f:</span> <span class='symbol'>:rowname</span><span class='comma'>,</span> <span class='label'>index:</span> <span class='lbracket'>[</span><span class='lbracket'>[</span><span class='int'>1</span><span class='rbracket'>]</span><span class='rbracket'>]</span><span class='rbrace'>}</span><span class='comma'>,</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>x1</span><span class='tstring_end'>&quot;</span></span><span class='rparen'>)</span>
1493
+ <span class='id identifier rubyid_fassign'>fassign</span><span class='lparen'>(</span><span class='id identifier rubyid_sexp'>sexp</span><span class='comma'>,</span> <span class='lbrace'>{</span><span class='label'>f:</span> <span class='symbol'>:somefunc</span><span class='comma'>,</span> <span class='label'>params:</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>(2, 3, 4)</span><span class='tstring_end'>&quot;</span></span><span class='rbrace'>}</span><span class='comma'>,</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>x1</span><span class='tstring_end'>&quot;</span></span><span class='rparen'>)</span></code></pre>
1494
+ <hr>
1495
+
1496
+
1497
+ </div>
1498
+ </div>
1499
+ <div class="tags">
1500
+
1501
+
1502
+ </div><table class="source_code">
1503
+ <tr>
1504
+ <td>
1505
+ <pre class="lines">
1506
+
1507
+
1508
+ 381
1509
+ 382
1510
+ 383
1511
+ 384
1512
+ 385
1513
+ 386
1514
+ 387
1515
+ 388
1516
+ 389
1517
+ 390
1518
+ 391
1519
+ 392
1520
+ 393
1521
+ 394
1522
+ 395
1523
+ 396
1524
+ 397</pre>
1525
+ </td>
1526
+ <td>
1527
+ <pre class="code"><span class="info file"># File 'lib/JRubyR/renjin.rb', line 381</span>
1528
+
1529
+ <span class='kw'>def</span> <span class='id identifier rubyid_fassign'>fassign</span><span class='lparen'>(</span><span class='id identifier rubyid_sexp'>sexp</span><span class='comma'>,</span> <span class='id identifier rubyid_function'>function</span><span class='comma'>,</span> <span class='id identifier rubyid_value'>value</span><span class='rparen'>)</span>
1530
+
1531
+ <span class='kw'>if</span> <span class='lparen'>(</span><span class='id identifier rubyid_function'>function</span><span class='period'>.</span><span class='id identifier rubyid_is_a?'>is_a?</span> <span class='const'>Hash</span><span class='rparen'>)</span>
1532
+ <span class='id identifier rubyid_index'>index</span> <span class='op'>=</span> <span class='id identifier rubyid_function'>function</span><span class='lbracket'>[</span><span class='symbol'>:index</span><span class='rbracket'>]</span>
1533
+ <span class='id identifier rubyid_params'>params</span> <span class='op'>=</span> <span class='id identifier rubyid_function'>function</span><span class='lbracket'>[</span><span class='symbol'>:params</span><span class='rbracket'>]</span>
1534
+ <span class='id identifier rubyid_function'>function</span> <span class='op'>=</span> <span class='id identifier rubyid_function'>function</span><span class='lbracket'>[</span><span class='symbol'>:f</span><span class='rbracket'>]</span>
1535
+ <span class='kw'>if</span> <span class='lparen'>(</span><span class='id identifier rubyid_index'>index</span><span class='rparen'>)</span>
1536
+ <span class='id identifier rubyid_eval'>eval</span><span class='lparen'>(</span><span class='tstring'><span class='tstring_beg'>&quot;</span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_function'>function</span><span class='period'>.</span><span class='id identifier rubyid_to_s'>to_s</span><span class='rbrace'>}</span><span class='tstring_content'>(</span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_sexp'>sexp</span><span class='period'>.</span><span class='id identifier rubyid_r'>r</span><span class='rbrace'>}</span><span class='tstring_content'>)</span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_index'>index</span><span class='rbrace'>}</span><span class='tstring_content'> = </span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_value'>value</span><span class='period'>.</span><span class='id identifier rubyid_r'>r</span><span class='rbrace'>}</span><span class='tstring_end'>&quot;</span></span><span class='rparen'>)</span>
1537
+ <span class='kw'>else</span>
1538
+ <span class='kw'>end</span>
1539
+ <span class='kw'>else</span>
1540
+ <span class='id identifier rubyid_eval'>eval</span><span class='lparen'>(</span><span class='tstring'><span class='tstring_beg'>&quot;</span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_function'>function</span><span class='period'>.</span><span class='id identifier rubyid_to_s'>to_s</span><span class='rbrace'>}</span><span class='tstring_content'>(</span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_sexp'>sexp</span><span class='period'>.</span><span class='id identifier rubyid_r'>r</span><span class='rbrace'>}</span><span class='tstring_content'>) = </span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_value'>value</span><span class='period'>.</span><span class='id identifier rubyid_r'>r</span><span class='rbrace'>}</span><span class='tstring_end'>&quot;</span></span><span class='rparen'>)</span>
1541
+ <span class='kw'>end</span>
1542
+
1543
+ <span class='id identifier rubyid_sexp'>sexp</span>
1544
+
1545
+ <span class='kw'>end</span></pre>
1546
+ </td>
1547
+ </tr>
1548
+ </table>
1549
+ </div>
1550
+
1551
+ <div class="method_details ">
1552
+ <h3 class="signature " id="finite?-instance_method">
1553
+
1554
+ - (<tt>Boolean</tt>) <strong>finite?</strong>(x)
1555
+
1556
+
1557
+
1558
+
1559
+
1560
+ </h3><div class="docstring">
1561
+ <div class="discussion">
1562
+ <hr>
1563
+ <hr>
1564
+
1565
+
1566
+ </div>
1567
+ </div>
1568
+ <div class="tags">
1569
+
1570
+ <p class="tag_title">Returns:</p>
1571
+ <ul class="return">
1572
+
1573
+ <li>
1574
+
1575
+
1576
+ <span class='type'>(<tt>Boolean</tt>)</span>
1577
+
1578
+
1579
+
1580
+ </li>
1581
+
1582
+ </ul>
1583
+
1584
+ </div><table class="source_code">
1585
+ <tr>
1586
+ <td>
1587
+ <pre class="lines">
1588
+
1589
+
1590
+ 128
1591
+ 129
1592
+ 130</pre>
1593
+ </td>
1594
+ <td>
1595
+ <pre class="code"><span class="info file"># File 'lib/JRubyR/renjin.rb', line 128</span>
1596
+
1597
+ <span class='kw'>def</span> <span class='id identifier rubyid_finite?'>finite?</span><span class='lparen'>(</span><span class='id identifier rubyid_x'>x</span><span class='rparen'>)</span>
1598
+ <span class='const'>R</span><span class='period'>.</span><span class='id identifier rubyid_is__finite'>is__finite</span><span class='lparen'>(</span><span class='id identifier rubyid_x'>x</span><span class='rparen'>)</span>
1599
+ <span class='kw'>end</span></pre>
1600
+ </td>
1601
+ </tr>
1602
+ </table>
1603
+ </div>
1604
+
1605
+ <div class="method_details ">
1606
+ <h3 class="signature " id="i-instance_method">
1607
+
1608
+ - (<tt>Object</tt>) <strong>i</strong>(value)
1609
+
1610
+
1611
+
1612
+
1613
+
1614
+ </h3><table class="source_code">
1615
+ <tr>
1616
+ <td>
1617
+ <pre class="lines">
1618
+
1619
+
1620
+ 188
1621
+ 189
1622
+ 190</pre>
1623
+ </td>
1624
+ <td>
1625
+ <pre class="code"><span class="info file"># File 'lib/JRubyR/renjin.rb', line 188</span>
1626
+
1627
+ <span class='kw'>def</span> <span class='id identifier rubyid_i'>i</span><span class='lparen'>(</span><span class='id identifier rubyid_value'>value</span><span class='rparen'>)</span>
1628
+ <span class='id identifier rubyid_eval'>eval</span><span class='lparen'>(</span><span class='tstring'><span class='tstring_beg'>&quot;</span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_value'>value</span><span class='rbrace'>}</span><span class='tstring_content'>L</span><span class='tstring_end'>&quot;</span></span><span class='rparen'>)</span>
1629
+ <span class='kw'>end</span></pre>
1630
+ </td>
1631
+ </tr>
1632
+ </table>
1633
+ </div>
1634
+
1635
+ <div class="method_details ">
1636
+ <h3 class="signature " id="install__package-instance_method">
1637
+
1638
+ - (<tt>Object</tt>) <strong>install__package</strong>(name)
1639
+
1640
+
1641
+
1642
+
1643
+
1644
+ </h3><div class="docstring">
1645
+ <div class="discussion">
1646
+ <hr>
1647
+ <hr>
1648
+
1649
+
1650
+ </div>
1651
+ </div>
1652
+ <div class="tags">
1653
+
1654
+
1655
+ </div><table class="source_code">
1656
+ <tr>
1657
+ <td>
1658
+ <pre class="lines">
1659
+
1660
+
1661
+ 403
1662
+ 404
1663
+ 405
1664
+ 406
1665
+ 407
1666
+ 408</pre>
1667
+ </td>
1668
+ <td>
1669
+ <pre class="code"><span class="info file"># File 'lib/JRubyR/renjin.rb', line 403</span>
1670
+
1671
+ <span class='kw'>def</span> <span class='id identifier rubyid_install__package'>install__package</span><span class='lparen'>(</span><span class='id identifier rubyid_name'>name</span><span class='rparen'>)</span>
1672
+
1673
+ <span class='id identifier rubyid_pm'>pm</span> <span class='op'>=</span> <span class='const'>PackageManager</span><span class='period'>.</span><span class='id identifier rubyid_new'>new</span>
1674
+ <span class='id identifier rubyid_pm'>pm</span><span class='period'>.</span><span class='id identifier rubyid_load_package'>load_package</span><span class='lparen'>(</span><span class='id identifier rubyid_name'>name</span><span class='rparen'>)</span>
1675
+
1676
+ <span class='kw'>end</span></pre>
1677
+ </td>
1678
+ </tr>
1679
+ </table>
1680
+ </div>
1681
+
1682
+ <div class="method_details ">
1683
+ <h3 class="signature " id="LETTERS-instance_method">
1684
+
1685
+ - (<tt>Object</tt>) <strong>LETTERS</strong>
1686
+
1687
+
1688
+
1689
+
1690
+
1691
+ </h3><table class="source_code">
1692
+ <tr>
1693
+ <td>
1694
+ <pre class="lines">
1695
+
1696
+
1697
+ 172
1698
+ 173
1699
+ 174</pre>
1700
+ </td>
1701
+ <td>
1702
+ <pre class="code"><span class="info file"># File 'lib/JRubyR/renjin.rb', line 172</span>
1703
+
1704
+ <span class='kw'>def</span> <span class='const'>LETTERS</span>
1705
+ <span class='id identifier rubyid_eval'>eval</span><span class='lparen'>(</span><span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>LETTERS</span><span class='tstring_end'>&quot;</span></span><span class='rparen'>)</span>
1706
+ <span class='kw'>end</span></pre>
1707
+ </td>
1708
+ </tr>
1709
+ </table>
1710
+ </div>
1711
+
1712
+ <div class="method_details ">
1713
+ <h3 class="signature " id="letters-instance_method">
1714
+
1715
+ - (<tt>Object</tt>) <strong>letters</strong>
1716
+
1717
+
1718
+
1719
+
1720
+
1721
+ </h3><table class="source_code">
1722
+ <tr>
1723
+ <td>
1724
+ <pre class="lines">
1725
+
1726
+
1727
+ 176
1728
+ 177
1729
+ 178</pre>
1730
+ </td>
1731
+ <td>
1732
+ <pre class="code"><span class="info file"># File 'lib/JRubyR/renjin.rb', line 176</span>
1733
+
1734
+ <span class='kw'>def</span> <span class='id identifier rubyid_letters'>letters</span>
1735
+ <span class='id identifier rubyid_eval'>eval</span><span class='lparen'>(</span><span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>letters</span><span class='tstring_end'>&quot;</span></span><span class='rparen'>)</span>
1736
+ <span class='kw'>end</span></pre>
1737
+ </td>
1738
+ </tr>
1739
+ </table>
1740
+ </div>
1741
+
1742
+ <div class="method_details ">
1743
+ <h3 class="signature " id="library-instance_method">
1744
+
1745
+ - (<tt>Object</tt>) <strong>library</strong>(package)
1746
+
1747
+
1748
+
1749
+
1750
+
1751
+ </h3><div class="docstring">
1752
+ <div class="discussion">
1753
+ <hr>
1754
+ <hr>
1755
+
1756
+
1757
+ </div>
1758
+ </div>
1759
+ <div class="tags">
1760
+
1761
+
1762
+ </div><table class="source_code">
1763
+ <tr>
1764
+ <td>
1765
+ <pre class="lines">
1766
+
1767
+
1768
+ 414
1769
+ 415
1770
+ 416
1771
+ 417
1772
+ 418
1773
+ 419
1774
+ 420
1775
+ 421
1776
+ 422</pre>
1777
+ </td>
1778
+ <td>
1779
+ <pre class="code"><span class="info file"># File 'lib/JRubyR/renjin.rb', line 414</span>
1780
+
1781
+ <span class='kw'>def</span> <span class='id identifier rubyid_library'>library</span><span class='lparen'>(</span><span class='id identifier rubyid_package'>package</span><span class='rparen'>)</span>
1782
+
1783
+ <span class='const'>Dir</span><span class='period'>.</span><span class='id identifier rubyid_chdir'>chdir</span><span class='lparen'>(</span><span class='const'>SciCom</span><span class='period'>.</span><span class='id identifier rubyid_cran_dir'>cran_dir</span><span class='rparen'>)</span>
1784
+ <span class='id identifier rubyid_filename'>filename</span> <span class='op'>=</span> <span class='const'>SciCom</span><span class='period'>.</span><span class='id identifier rubyid_cran_dir'>cran_dir</span> <span class='op'>+</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>/</span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_package'>package</span><span class='rbrace'>}</span><span class='tstring_content'>.jar</span><span class='tstring_end'>&quot;</span></span>
1785
+
1786
+ <span class='id identifier rubyid_require'>require</span> <span class='id identifier rubyid_filename'>filename</span>
1787
+ <span class='id identifier rubyid_eval'>eval</span><span class='lparen'>(</span><span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>library(</span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_package'>package</span><span class='rbrace'>}</span><span class='tstring_content'>)</span><span class='tstring_end'>&quot;</span></span><span class='rparen'>)</span>
1788
+
1789
+ <span class='kw'>end</span></pre>
1790
+ </td>
1791
+ </tr>
1792
+ </table>
1793
+ </div>
1794
+
1795
+ <div class="method_details ">
1796
+ <h3 class="signature " id="md-instance_method">
1797
+
1798
+ - (<tt>Object</tt>) <strong>md</strong>(value)
1799
+
1800
+
1801
+
1802
+
1803
+
1804
+ </h3><table class="source_code">
1805
+ <tr>
1806
+ <td>
1807
+ <pre class="lines">
1808
+
1809
+
1810
+ 196
1811
+ 197
1812
+ 198</pre>
1813
+ </td>
1814
+ <td>
1815
+ <pre class="code"><span class="info file"># File 'lib/JRubyR/renjin.rb', line 196</span>
1816
+
1817
+ <span class='kw'>def</span> <span class='id identifier rubyid_md'>md</span><span class='lparen'>(</span><span class='id identifier rubyid_value'>value</span><span class='rparen'>)</span>
1818
+ <span class='const'>Renjin</span><span class='op'>::</span><span class='const'>Vector</span><span class='period'>.</span><span class='id identifier rubyid_new'>new</span><span class='lparen'>(</span><span class='id identifier rubyid_build_vector'>build_vector</span><span class='lparen'>(</span><span class='id identifier rubyid_value'>value</span><span class='rparen'>)</span><span class='rparen'>)</span>
1819
+ <span class='kw'>end</span></pre>
1820
+ </td>
1821
+ </tr>
1822
+ </table>
1823
+ </div>
1824
+
1825
+ <div class="method_details ">
1826
+ <h3 class="signature " id="month__abb-instance_method">
1827
+
1828
+ - (<tt>Object</tt>) <strong>month__abb</strong>
1829
+
1830
+
1831
+
1832
+
1833
+
1834
+ </h3><table class="source_code">
1835
+ <tr>
1836
+ <td>
1837
+ <pre class="lines">
1838
+
1839
+
1840
+ 180
1841
+ 181
1842
+ 182</pre>
1843
+ </td>
1844
+ <td>
1845
+ <pre class="code"><span class="info file"># File 'lib/JRubyR/renjin.rb', line 180</span>
1846
+
1847
+ <span class='kw'>def</span> <span class='id identifier rubyid_month__abb'>month__abb</span>
1848
+ <span class='id identifier rubyid_eval'>eval</span><span class='lparen'>(</span><span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>month.abb</span><span class='tstring_end'>&quot;</span></span><span class='rparen'>)</span>
1849
+ <span class='kw'>end</span></pre>
1850
+ </td>
1851
+ </tr>
1852
+ </table>
1853
+ </div>
1854
+
1855
+ <div class="method_details ">
1856
+ <h3 class="signature " id="month__name-instance_method">
1857
+
1858
+ - (<tt>Object</tt>) <strong>month__name</strong>
1859
+
1860
+
1861
+
1862
+
1863
+
1864
+ </h3><table class="source_code">
1865
+ <tr>
1866
+ <td>
1867
+ <pre class="lines">
1868
+
1869
+
1870
+ 184
1871
+ 185
1872
+ 186</pre>
1873
+ </td>
1874
+ <td>
1875
+ <pre class="code"><span class="info file"># File 'lib/JRubyR/renjin.rb', line 184</span>
1876
+
1877
+ <span class='kw'>def</span> <span class='id identifier rubyid_month__name'>month__name</span>
1878
+ <span class='id identifier rubyid_eval'>eval</span><span class='lparen'>(</span><span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>month.name</span><span class='tstring_end'>&quot;</span></span><span class='rparen'>)</span>
1879
+ <span class='kw'>end</span></pre>
1880
+ </td>
1881
+ </tr>
1882
+ </table>
1883
+ </div>
1884
+
1885
+ <div class="method_details ">
1886
+ <h3 class="signature " id="na?-instance_method">
1887
+
1888
+ - (<tt>Boolean</tt>) <strong>na?</strong>(x)
1889
+
1890
+
1891
+
1892
+
1893
+
1894
+ </h3><div class="docstring">
1895
+ <div class="discussion">
1896
+ <hr>
1897
+
1898
+ <p>The integer constant used to designate elements or values that are missing
1899
+ in the statistical sense, or literally "Not Available". For integers
1900
+ (Fixnum) this is represented as the minimum integer from Java
1901
+ Integer.MIN_VALUE</p>
1902
+ <hr>
1903
+
1904
+
1905
+ </div>
1906
+ </div>
1907
+ <div class="tags">
1908
+
1909
+ <p class="tag_title">Returns:</p>
1910
+ <ul class="return">
1911
+
1912
+ <li>
1913
+
1914
+
1915
+ <span class='type'>(<tt>Boolean</tt>)</span>
1916
+
1917
+
1918
+
1919
+ </li>
1920
+
1921
+ </ul>
1922
+
1923
+ </div><table class="source_code">
1924
+ <tr>
1925
+ <td>
1926
+ <pre class="lines">
1927
+
1928
+
1929
+ 120
1930
+ 121
1931
+ 122</pre>
1932
+ </td>
1933
+ <td>
1934
+ <pre class="code"><span class="info file"># File 'lib/JRubyR/renjin.rb', line 120</span>
1935
+
1936
+ <span class='kw'>def</span> <span class='id identifier rubyid_na?'>na?</span><span class='lparen'>(</span><span class='id identifier rubyid_x'>x</span><span class='rparen'>)</span>
1937
+ <span class='const'>R</span><span class='period'>.</span><span class='id identifier rubyid_is__na'>is__na</span><span class='lparen'>(</span><span class='id identifier rubyid_x'>x</span><span class='rparen'>)</span>
1938
+ <span class='kw'>end</span></pre>
1939
+ </td>
1940
+ </tr>
1941
+ </table>
1942
+ </div>
1943
+
1944
+ <div class="method_details ">
1945
+ <h3 class="signature " id="nan?-instance_method">
1946
+
1947
+ - (<tt>Boolean</tt>) <strong>nan?</strong>(x)
1948
+
1949
+
1950
+
1951
+
1952
+
1953
+ </h3><div class="docstring">
1954
+ <div class="discussion">
1955
+ <hr>
1956
+ <hr>
1957
+
1958
+
1959
+ </div>
1960
+ </div>
1961
+ <div class="tags">
1962
+
1963
+ <p class="tag_title">Returns:</p>
1964
+ <ul class="return">
1965
+
1966
+ <li>
1967
+
1968
+
1969
+ <span class='type'>(<tt>Boolean</tt>)</span>
1970
+
1971
+
1972
+
1973
+ </li>
1974
+
1975
+ </ul>
1976
+
1977
+ </div><table class="source_code">
1978
+ <tr>
1979
+ <td>
1980
+ <pre class="lines">
1981
+
1982
+
1983
+ 109
1984
+ 110
1985
+ 111</pre>
1986
+ </td>
1987
+ <td>
1988
+ <pre class="code"><span class="info file"># File 'lib/JRubyR/renjin.rb', line 109</span>
1989
+
1990
+ <span class='kw'>def</span> <span class='id identifier rubyid_nan?'>nan?</span><span class='lparen'>(</span><span class='id identifier rubyid_x'>x</span><span class='rparen'>)</span>
1991
+ <span class='id identifier rubyid_is__nan'>is__nan</span><span class='lparen'>(</span><span class='id identifier rubyid_x'>x</span><span class='rparen'>)</span>
1992
+ <span class='kw'>end</span></pre>
1993
+ </td>
1994
+ </tr>
1995
+ </table>
1996
+ </div>
1997
+
1998
+ <div class="method_details ">
1999
+ <h3 class="signature " id="parse-instance_method">
2000
+
2001
+ - (<tt>Object</tt>) <strong>parse</strong>(*args)
2002
+
2003
+
2004
+
2005
+
2006
+
2007
+ </h3><div class="docstring">
2008
+ <div class="discussion">
2009
+ <hr>
2010
+ <hr>
2011
+
2012
+
2013
+ </div>
2014
+ </div>
2015
+ <div class="tags">
2016
+
2017
+
2018
+ </div><table class="source_code">
2019
+ <tr>
2020
+ <td>
2021
+ <pre class="lines">
2022
+
2023
+
2024
+ 249
2025
+ 250
2026
+ 251
2027
+ 252
2028
+ 253
2029
+ 254
2030
+ 255
2031
+ 256
2032
+ 257
2033
+ 258
2034
+ 259
2035
+ 260
2036
+ 261
2037
+ 262
2038
+ 263
2039
+ 264
2040
+ 265
2041
+ 266
2042
+ 267
2043
+ 268
2044
+ 269
2045
+ 270
2046
+ 271
2047
+ 272
2048
+ 273
2049
+ 274
2050
+ 275
2051
+ 276
2052
+ 277
2053
+ 278
2054
+ 279
2055
+ 280
2056
+ 281
2057
+ 282
2058
+ 283
2059
+ 284
2060
+ 285
2061
+ 286
2062
+ 287
2063
+ 288
2064
+ 289</pre>
2065
+ </td>
2066
+ <td>
2067
+ <pre class="code"><span class="info file"># File 'lib/JRubyR/renjin.rb', line 249</span>
2068
+
2069
+ <span class='kw'>def</span> <span class='id identifier rubyid_parse'>parse</span><span class='lparen'>(</span><span class='op'>*</span><span class='id identifier rubyid_args'>args</span><span class='rparen'>)</span>
2070
+
2071
+ <span class='id identifier rubyid_params'>params</span> <span class='op'>=</span> <span class='const'>Array</span><span class='period'>.</span><span class='id identifier rubyid_new'>new</span>
2072
+
2073
+ <span class='id identifier rubyid_args'>args</span><span class='period'>.</span><span class='id identifier rubyid_each'>each</span> <span class='kw'>do</span> <span class='op'>|</span><span class='id identifier rubyid_arg'>arg</span><span class='op'>|</span>
2074
+ <span class='kw'>if</span> <span class='lparen'>(</span><span class='id identifier rubyid_arg'>arg</span><span class='period'>.</span><span class='id identifier rubyid_is_a?'>is_a?</span> <span class='const'>Numeric</span><span class='rparen'>)</span>
2075
+ <span class='id identifier rubyid_params'>params</span> <span class='op'>&lt;&lt;</span> <span class='id identifier rubyid_arg'>arg</span>
2076
+ <span class='kw'>elsif</span><span class='lparen'>(</span><span class='id identifier rubyid_arg'>arg</span><span class='period'>.</span><span class='id identifier rubyid_is_a?'>is_a?</span> <span class='const'>String</span><span class='rparen'>)</span>
2077
+ <span class='id identifier rubyid_params'>params</span> <span class='op'>&lt;&lt;</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>\&quot;</span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_arg'>arg</span><span class='rbrace'>}</span><span class='tstring_content'>\&quot;</span><span class='tstring_end'>&quot;</span></span>
2078
+ <span class='kw'>elsif</span> <span class='lparen'>(</span><span class='id identifier rubyid_arg'>arg</span><span class='period'>.</span><span class='id identifier rubyid_is_a?'>is_a?</span> <span class='const'>Symbol</span><span class='rparen'>)</span>
2079
+ <span class='id identifier rubyid_var'>var</span> <span class='op'>=</span> <span class='id identifier rubyid_eval'>eval</span><span class='lparen'>(</span><span class='tstring'><span class='tstring_beg'>&quot;</span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_arg'>arg</span><span class='period'>.</span><span class='id identifier rubyid_to_s'>to_s</span><span class='rbrace'>}</span><span class='tstring_end'>&quot;</span></span><span class='rparen'>)</span>
2080
+ <span class='id identifier rubyid_params'>params</span> <span class='op'>&lt;&lt;</span> <span class='id identifier rubyid_var'>var</span><span class='period'>.</span><span class='id identifier rubyid_r'>r</span>
2081
+ <span class='kw'>elsif</span> <span class='lparen'>(</span><span class='id identifier rubyid_arg'>arg</span><span class='period'>.</span><span class='id identifier rubyid_is_a?'>is_a?</span> <span class='const'>TrueClass</span><span class='rparen'>)</span>
2082
+ <span class='id identifier rubyid_params'>params</span> <span class='op'>&lt;&lt;</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>TRUE</span><span class='tstring_end'>&quot;</span></span>
2083
+ <span class='kw'>elsif</span> <span class='lparen'>(</span><span class='id identifier rubyid_arg'>arg</span><span class='period'>.</span><span class='id identifier rubyid_is_a?'>is_a?</span> <span class='const'>FalseClass</span><span class='rparen'>)</span>
2084
+ <span class='id identifier rubyid_params'>params</span> <span class='op'>&lt;&lt;</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>FALSE</span><span class='tstring_end'>&quot;</span></span>
2085
+ <span class='kw'>elsif</span> <span class='lparen'>(</span><span class='id identifier rubyid_arg'>arg</span> <span class='op'>==</span> <span class='kw'>nil</span><span class='rparen'>)</span>
2086
+ <span class='id identifier rubyid_params'>params</span> <span class='op'>&lt;&lt;</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>NULL</span><span class='tstring_end'>&quot;</span></span>
2087
+ <span class='kw'>elsif</span> <span class='lparen'>(</span><span class='id identifier rubyid_arg'>arg</span><span class='period'>.</span><span class='id identifier rubyid_is_a?'>is_a?</span> <span class='const'>NegRange</span><span class='rparen'>)</span>
2088
+ <span class='id identifier rubyid_final_value'>final_value</span> <span class='op'>=</span> <span class='lparen'>(</span><span class='id identifier rubyid_arg'>arg</span><span class='period'>.</span><span class='id identifier rubyid_exclude_end?'>exclude_end?</span><span class='rparen'>)</span><span class='op'>?</span> <span class='lparen'>(</span><span class='id identifier rubyid_arg'>arg</span><span class='period'>.</span><span class='id identifier rubyid_end'>end</span> <span class='op'>-</span> <span class='int'>1</span><span class='rparen'>)</span> <span class='op'>:</span> <span class='id identifier rubyid_arg'>arg</span><span class='period'>.</span><span class='id identifier rubyid_end'>end</span>
2089
+ <span class='id identifier rubyid_params'>params</span> <span class='op'>&lt;&lt;</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>-(</span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_arg'>arg</span><span class='period'>.</span><span class='id identifier rubyid_begin'>begin</span><span class='rbrace'>}</span><span class='tstring_content'>:</span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_final_value'>final_value</span><span class='rbrace'>}</span><span class='tstring_content'>)</span><span class='tstring_end'>&quot;</span></span>
2090
+ <span class='kw'>elsif</span> <span class='lparen'>(</span><span class='id identifier rubyid_arg'>arg</span><span class='period'>.</span><span class='id identifier rubyid_is_a?'>is_a?</span> <span class='const'>Range</span><span class='rparen'>)</span>
2091
+ <span class='id identifier rubyid_final_value'>final_value</span> <span class='op'>=</span> <span class='lparen'>(</span><span class='id identifier rubyid_arg'>arg</span><span class='period'>.</span><span class='id identifier rubyid_exclude_end?'>exclude_end?</span><span class='rparen'>)</span><span class='op'>?</span> <span class='lparen'>(</span><span class='id identifier rubyid_arg'>arg</span><span class='period'>.</span><span class='id identifier rubyid_end'>end</span> <span class='op'>-</span> <span class='int'>1</span><span class='rparen'>)</span> <span class='op'>:</span> <span class='id identifier rubyid_arg'>arg</span><span class='period'>.</span><span class='id identifier rubyid_end'>end</span>
2092
+ <span class='id identifier rubyid_params'>params</span> <span class='op'>&lt;&lt;</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>(</span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_arg'>arg</span><span class='period'>.</span><span class='id identifier rubyid_begin'>begin</span><span class='rbrace'>}</span><span class='tstring_content'>:</span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_final_value'>final_value</span><span class='rbrace'>}</span><span class='tstring_content'>)</span><span class='tstring_end'>&quot;</span></span>
2093
+ <span class='kw'>elsif</span> <span class='lparen'>(</span><span class='id identifier rubyid_arg'>arg</span><span class='period'>.</span><span class='id identifier rubyid_is_a?'>is_a?</span> <span class='const'>Hash</span><span class='rparen'>)</span>
2094
+ <span class='id identifier rubyid_arg'>arg</span><span class='period'>.</span><span class='id identifier rubyid_each_pair'>each_pair</span> <span class='kw'>do</span> <span class='op'>|</span><span class='id identifier rubyid_key'>key</span><span class='comma'>,</span> <span class='id identifier rubyid_value'>value</span><span class='op'>|</span>
2095
+ <span class='id identifier rubyid_params'>params</span> <span class='op'>&lt;&lt;</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_key'>key</span><span class='period'>.</span><span class='id identifier rubyid_to_s'>to_s</span><span class='rbrace'>}</span><span class='tstring_content'> = </span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_parse'>parse</span><span class='lparen'>(</span><span class='id identifier rubyid_value'>value</span><span class='rparen'>)</span><span class='rbrace'>}</span><span class='tstring_end'>&quot;</span></span>
2096
+ <span class='kw'>end</span>
2097
+ <span class='kw'>elsif</span> <span class='lparen'>(</span><span class='lparen'>(</span><span class='id identifier rubyid_arg'>arg</span><span class='period'>.</span><span class='id identifier rubyid_is_a?'>is_a?</span> <span class='const'>Renjin</span><span class='op'>::</span><span class='const'>RubySexp</span><span class='rparen'>)</span> <span class='op'>||</span> <span class='lparen'>(</span><span class='id identifier rubyid_arg'>arg</span><span class='period'>.</span><span class='id identifier rubyid_is_a?'>is_a?</span> <span class='const'>Array</span><span class='rparen'>)</span> <span class='op'>||</span> <span class='lparen'>(</span><span class='id identifier rubyid_arg'>arg</span><span class='period'>.</span><span class='id identifier rubyid_is_a?'>is_a?</span> <span class='const'>MDArray</span><span class='rparen'>)</span><span class='rparen'>)</span>
2098
+ <span class='id identifier rubyid_params'>params</span> <span class='op'>&lt;&lt;</span> <span class='id identifier rubyid_arg'>arg</span><span class='period'>.</span><span class='id identifier rubyid_r'>r</span>
2099
+ <span class='comment'># elsif
2100
+ </span> <span class='comment'># params &lt;&lt; arg.inspect
2101
+ </span> <span class='kw'>else</span>
2102
+ <span class='id identifier rubyid_raise'>raise</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>Unknown parameter type for R: </span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_arg'>arg</span><span class='rbrace'>}</span><span class='tstring_end'>&quot;</span></span>
2103
+ <span class='kw'>end</span>
2104
+
2105
+ <span class='kw'>end</span>
2106
+
2107
+ <span class='id identifier rubyid_params'>params</span><span class='period'>.</span><span class='id identifier rubyid_join'>join</span><span class='lparen'>(</span><span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>,</span><span class='tstring_end'>&quot;</span></span><span class='rparen'>)</span>
2108
+
2109
+ <span class='kw'>end</span></pre>
2110
+ </td>
2111
+ </tr>
2112
+ </table>
2113
+ </div>
2114
+
2115
+ <div class="method_details ">
2116
+ <h3 class="signature " id="pi-instance_method">
2117
+
2118
+ - (<tt>Object</tt>) <strong>pi</strong>
2119
+
2120
+
2121
+
2122
+
2123
+
2124
+ </h3><div class="docstring">
2125
+ <div class="discussion">
2126
+ <hr>
2127
+
2128
+ <p>R built-in constants</p>
2129
+ <hr>
2130
+
2131
+
2132
+ </div>
2133
+ </div>
2134
+ <div class="tags">
2135
+
2136
+
2137
+ </div><table class="source_code">
2138
+ <tr>
2139
+ <td>
2140
+ <pre class="lines">
2141
+
2142
+
2143
+ 168
2144
+ 169
2145
+ 170</pre>
2146
+ </td>
2147
+ <td>
2148
+ <pre class="code"><span class="info file"># File 'lib/JRubyR/renjin.rb', line 168</span>
2149
+
2150
+ <span class='kw'>def</span> <span class='id identifier rubyid_pi'>pi</span>
2151
+ <span class='id identifier rubyid_eval'>eval</span><span class='lparen'>(</span><span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>pi</span><span class='tstring_end'>&quot;</span></span><span class='rparen'>)</span>
2152
+ <span class='kw'>end</span></pre>
2153
+ </td>
2154
+ </tr>
2155
+ </table>
2156
+ </div>
2157
+
2158
+ <div class="method_details ">
2159
+ <h3 class="signature " id="pull-instance_method">
2160
+
2161
+ - (<tt>Object</tt>) <strong>pull</strong>(name)
2162
+
2163
+
2164
+
2165
+
2166
+
2167
+ </h3><div class="docstring">
2168
+ <div class="discussion">
2169
+ <hr>
2170
+ <hr>
2171
+
2172
+
2173
+ </div>
2174
+ </div>
2175
+ <div class="tags">
2176
+
2177
+
2178
+ </div><table class="source_code">
2179
+ <tr>
2180
+ <td>
2181
+ <pre class="lines">
2182
+
2183
+
2184
+ 368
2185
+ 369
2186
+ 370</pre>
2187
+ </td>
2188
+ <td>
2189
+ <pre class="code"><span class="info file"># File 'lib/JRubyR/renjin.rb', line 368</span>
2190
+
2191
+ <span class='kw'>def</span> <span class='id identifier rubyid_pull'>pull</span><span class='lparen'>(</span><span class='id identifier rubyid_name'>name</span><span class='rparen'>)</span>
2192
+ <span class='id identifier rubyid_eval'>eval</span><span class='lparen'>(</span><span class='id identifier rubyid_name'>name</span><span class='rparen'>)</span>
2193
+ <span class='kw'>end</span></pre>
2194
+ </td>
2195
+ </tr>
2196
+ </table>
2197
+ </div>
2198
+
2199
+ </div>
2200
+
2201
+ </div>
2202
+
2203
+ <div id="footer">
2204
+ Generated on Tue Jul 14 18:12:23 2015 by
2205
+ <a href="http://yardoc.org" title="Yay! A Ruby Documentation Tool" target="_parent">yard</a>
2206
+ 0.8.7.6 (ruby-1.9.3).
2207
+ </div>
2208
+
2209
+ </body>
2210
+ </html>