renalware-core 2.0.149 → 2.0.151

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Files changed (252) hide show
  1. checksums.yaml +4 -4
  2. data/README.md +23 -2
  3. data/app/assets/config/renalware/core/manifest.js +1 -0
  4. data/app/assets/images/renalware/icons/align-justify.svg +3 -0
  5. data/app/assets/images/renalware/icons/bar-chart.svg +1 -0
  6. data/app/assets/images/renalware/icons/chart-bar.svg +1 -0
  7. data/app/assets/images/renalware/icons/chart.svg +3 -0
  8. data/app/assets/images/renalware/icons/list-bullet.svg +1 -0
  9. data/app/assets/images/renalware/icons/list.svg +8 -0
  10. data/app/assets/javascripts/renalware/README.md +25 -1
  11. data/app/assets/javascripts/renalware/components/dialogs.js.erb +3 -1
  12. data/app/assets/javascripts/renalware/components/hd.js +2 -2
  13. data/app/assets/javascripts/renalware/components/letters.js +1 -1
  14. data/app/assets/javascripts/renalware/components/masonry.run.js +2 -2
  15. data/app/assets/javascripts/renalware/components/patient_menu.js +1 -1
  16. data/app/assets/javascripts/renalware/components/toggler.js +1 -1
  17. data/app/assets/javascripts/renalware/rollup_compiled.css +87457 -0
  18. data/app/assets/javascripts/renalware/rollup_compiled.js +3148 -3
  19. data/app/assets/stylesheets/renalware/core.scss +1 -0
  20. data/app/assets/stylesheets/renalware/modules/_hd.scss +8 -4
  21. data/app/assets/stylesheets/renalware/modules/_pathology.scss +8 -1
  22. data/app/assets/stylesheets/renalware/modules/_pd.scss +35 -0
  23. data/app/assets/stylesheets/renalware/partials/_charting.scss +17 -0
  24. data/app/assets/stylesheets/renalware/partials/_forms.scss +5 -1
  25. data/app/assets/stylesheets/renalware/partials/_simple_form.scss +8 -0
  26. data/app/assets/stylesheets/renalware/partials/_utilities.scss +12 -0
  27. data/app/assets/stylesheets/tailwind/tailwind.css +3 -0
  28. data/app/components/renalware/application_component.rb +2 -1
  29. data/app/components/renalware/events/{biopsies_component.html.slim → event_list_component.html.slim} +5 -4
  30. data/app/components/renalware/events/event_list_component.rb +77 -0
  31. data/app/components/renalware/hd/administer_prescription_dropdown_component.rb +1 -5
  32. data/app/components/renalware/hd/prescription_last_administration_component.html.slim +0 -1
  33. data/app/components/renalware/hd/prescription_last_administration_component.rb +8 -7
  34. data/app/components/renalware/letters/unread_electronic_ccs_component.rb +1 -0
  35. data/app/components/renalware/pathology/chart_component.html.slim +5 -0
  36. data/app/components/renalware/pathology/chart_component.rb +40 -0
  37. data/app/components/renalware/pathology/sparkline_component.html.slim +15 -0
  38. data/app/components/renalware/pathology/sparkline_component.rb +135 -0
  39. data/app/components/renalware/patients/side_menu_component.rb +2 -11
  40. data/app/components/renalware/pd/adequacy_results_component.html.slim +9 -0
  41. data/app/components/renalware/pd/adequacy_results_component.rb +39 -0
  42. data/app/components/renalware/pd/pet_results_component.html.slim +37 -0
  43. data/app/components/renalware/pd/pet_results_component.rb +84 -0
  44. data/app/{views/renalware/surveys/_eq5d_summary_part.html.slim → components/renalware/surveys/eq5d_component.html.slim} +5 -5
  45. data/app/{models/renalware/surveys/eq5d_summary_part.rb → components/renalware/surveys/eq5d_component.rb} +7 -5
  46. data/app/{views/renalware/surveys/_pos_s_summary_part.html.slim → components/renalware/surveys/pos_s_component.html.slim} +6 -9
  47. data/app/{models/renalware/surveys/pos_s_summary_part.rb → components/renalware/surveys/pos_s_component.rb} +9 -5
  48. data/app/components/renalware/system/admin_menu_component.rb +2 -2
  49. data/app/components/renalware/system/article_component.html.slim +3 -0
  50. data/app/components/renalware/system/article_component.rb +9 -0
  51. data/app/controllers/renalware/admissions/consults_controller.rb +1 -1
  52. data/app/controllers/renalware/concerns/pdf_renderable.rb +1 -1
  53. data/app/controllers/renalware/hd/scheduling/diaries_controller.rb +1 -1
  54. data/app/controllers/renalware/medications/prescriptions_controller.rb +1 -1
  55. data/app/controllers/renalware/pathology/charts_controller.rb +21 -0
  56. data/app/controllers/renalware/pathology/current_observation_results_controller.rb +1 -1
  57. data/app/controllers/renalware/pathology/historical_observation_results_controller.rb +1 -1
  58. data/app/controllers/renalware/pathology/nearest_observation_results_controller.rb +52 -0
  59. data/app/controllers/renalware/pathology/observation_requests_controller.rb +1 -1
  60. data/app/controllers/renalware/pathology/observations_controller.rb +26 -2
  61. data/app/controllers/renalware/pathology/requests/requests_controller.rb +7 -5
  62. data/app/controllers/renalware/pd/adequacy_completions_controller.rb +18 -0
  63. data/app/controllers/renalware/pd/adequacy_results_controller.rb +98 -0
  64. data/app/controllers/renalware/pd/pet_completions_controller.rb +18 -0
  65. data/app/controllers/renalware/pd/pet_results_controller.rb +122 -0
  66. data/app/controllers/renalware/pd/unified_pet_adequacies_controller.rb +102 -0
  67. data/app/controllers/renalware/renal/aki_alerts_controller.rb +1 -1
  68. data/app/controllers/renalware/renal/registry_preflight_checks_controller.rb +55 -19
  69. data/app/documents/renalware/age.rb +3 -1
  70. data/app/helpers/renalware/application_helper.rb +7 -7
  71. data/app/helpers/renalware/article_helper.rb +3 -3
  72. data/app/helpers/renalware/boolean_helper.rb +15 -0
  73. data/app/helpers/renalware/clipboard_helper.rb +2 -3
  74. data/app/helpers/renalware/dashboards_helper.rb +2 -2
  75. data/app/helpers/renalware/definition_list_helper.rb +3 -3
  76. data/app/helpers/renalware/devise_helper.rb +1 -1
  77. data/app/helpers/renalware/form_helper.rb +2 -2
  78. data/app/helpers/renalware/letters_helper.rb +1 -1
  79. data/app/helpers/renalware/link_helper.rb +1 -1
  80. data/app/helpers/renalware/mdm_helper.rb +1 -0
  81. data/app/helpers/renalware/navigation_helper.rb +1 -1
  82. data/app/helpers/renalware/patient_helper.rb +2 -2
  83. data/app/helpers/renalware/snippets_helper.rb +9 -10
  84. data/app/helpers/renalware/toggle_helper.rb +6 -6
  85. data/app/helpers/renalware/tooltip_helper.rb +14 -16
  86. data/app/inputs/clock_picker_input.rb +3 -3
  87. data/app/inputs/date_picker_input.rb +3 -3
  88. data/app/inputs/simple_time_input.rb +3 -3
  89. data/app/inputs/trix_editor_input.rb +2 -0
  90. data/app/javascript/renalware/controllers/blas_controller.js +37 -0
  91. data/app/javascript/renalware/controllers/modal_controller.js +137 -0
  92. data/app/javascript/renalware/controllers/pathology/sparklines_controller.js +206 -0
  93. data/app/javascript/renalware/controllers/pd/pet_charts_controller.js +169 -0
  94. data/app/javascript/renalware/controllers/session_controller.js +1 -1
  95. data/app/javascript/renalware/controllers/simple_toggle_controller.js +17 -0
  96. data/app/javascript/renalware/controllers/tabs_controller.js +43 -0
  97. data/app/javascript/renalware/controllers/toggle_controller.js +2 -2
  98. data/app/javascript/renalware/index.js +10 -0
  99. data/app/models/concerns/renalware/patients_ransack_helper.rb +2 -0
  100. data/app/models/renalware/clinics/body_surface_area.rb +40 -0
  101. data/app/models/renalware/clinics/clinic_visit.rb +21 -1
  102. data/app/models/renalware/clinics/total_body_water.rb +63 -0
  103. data/app/models/renalware/events/advanced_care_plan.rb +24 -0
  104. data/app/models/renalware/events/clinical_frailty_score.rb +24 -0
  105. data/app/models/renalware/feeds/hl7_message.rb +1 -0
  106. data/app/models/renalware/hd/prescription_last_administration_query.rb +4 -0
  107. data/app/models/renalware/hd/session_forms/pdf_renderer.rb +1 -1
  108. data/app/models/renalware/hd/sessions/auditable_session_collection.rb +4 -1
  109. data/app/models/renalware/letters/html_renderer.rb +1 -1
  110. data/app/models/renalware/letters/printing/duplex_interleaved_pdf_renderer.rb +1 -1
  111. data/app/models/renalware/letters/recipient_address_pdf_renderer.rb +1 -1
  112. data/app/models/renalware/pathology/nearest_observations_query.rb +44 -0
  113. data/app/models/renalware/pathology/observations_jsonb_serializer.rb +1 -1
  114. data/app/models/renalware/patient.rb +16 -1
  115. data/app/models/renalware/patients/alert.rb +1 -0
  116. data/app/models/renalware/patients/ingestion/update_master_patient_index.rb +1 -0
  117. data/app/models/renalware/patients/patient_hospital_identifiers.rb +1 -0
  118. data/app/models/renalware/pd.rb +2 -0
  119. data/app/models/renalware/pd/adequacy_calculated_attributes.rb +159 -0
  120. data/app/models/renalware/pd/adequacy_result.rb +76 -0
  121. data/app/models/renalware/pd/apd/glucose_calculator.rb +1 -0
  122. data/app/models/renalware/pd/patient.rb +4 -0
  123. data/app/models/renalware/pd/pet_dextrose_concentration.rb +17 -0
  124. data/app/models/renalware/pd/pet_result.rb +92 -0
  125. data/app/models/renalware/pd/unified_pet_adequacy_form.rb +46 -0
  126. data/app/models/renalware/renal/registry/preflight_checks/missing_esrf_query.rb +50 -0
  127. data/app/models/renalware/snippets/duplicate_snippet_title_generator.rb +1 -0
  128. data/app/models/renalware/transplants/recipient_workup_builder.rb +1 -0
  129. data/app/models/renalware/transplants/registration_status.rb +1 -1
  130. data/app/models/renalware/ukrdc/outgoing/rendering/patient_number.rb +1 -1
  131. data/app/models/renalware/user.rb +10 -0
  132. data/app/pdfs/renalware/events/event_pdf.rb +1 -0
  133. data/app/policies/renalware/events/advanced_care_plan_policy.rb +10 -0
  134. data/app/policies/renalware/events/clinical_frailty_score_policy.rb +10 -0
  135. data/app/policies/renalware/pd/adequacy_result_policy.rb +15 -0
  136. data/app/policies/renalware/pd/pet_result_policy.rb +15 -0
  137. data/app/policies/renalware/renal/registry_preflight_check_policy.rb +4 -0
  138. data/app/presenters/renalware/clinical/profile_presenter.rb +1 -0
  139. data/app/presenters/renalware/hd/dashboard_presenter.rb +1 -0
  140. data/app/presenters/renalware/hd/profile_presenter.rb +1 -0
  141. data/app/presenters/renalware/hd/scheduling/diary_presenter.rb +1 -0
  142. data/app/presenters/renalware/hd/session_presenter.rb +1 -0
  143. data/app/presenters/renalware/hd/unmet_preferences_presenter.rb +1 -1
  144. data/app/presenters/renalware/mdm_patients_presenter.rb +1 -0
  145. data/app/presenters/renalware/pd/dashboard_presenter.rb +10 -2
  146. data/app/presenters/renalware/ukrdc/patient_presenter.rb +1 -0
  147. data/app/presenters/renalware/user_session_presenter.rb +1 -1
  148. data/app/validators/renalware/patients/nhs_number_validator.rb +88 -0
  149. data/app/values/renalware/address.rb +1 -0
  150. data/app/views/renalware/accesses/assessments/show.html.slim +1 -1
  151. data/app/views/renalware/accesses/procedures/show.html.slim +1 -1
  152. data/app/views/renalware/accesses/profiles/show.html.slim +1 -1
  153. data/app/views/renalware/admin/cache/show.html.slim +36 -0
  154. data/app/views/renalware/admin/playgrounds/show.html.slim +3 -0
  155. data/app/views/renalware/clinical/profiles/show.html.slim +11 -1
  156. data/app/views/renalware/clinics/clinic_visits/_table.html.slim +2 -0
  157. data/app/views/renalware/clinics/clinic_visits/_table_row.html.slim +2 -0
  158. data/app/views/renalware/dashboard/letters/_letter.html.slim +1 -1
  159. data/app/views/renalware/directory/people/show.html.slim +1 -1
  160. data/app/views/renalware/events/advanced_care_plans/_cell.html.slim +2 -0
  161. data/app/views/renalware/events/advanced_care_plans/_inputs.html.slim +4 -0
  162. data/app/views/renalware/events/advanced_care_plans/_toggled_cell.html.slim +8 -0
  163. data/app/views/renalware/events/clinical_frailty_score/_cell.html.slim +2 -0
  164. data/app/views/renalware/events/clinical_frailty_score/_inputs.html.slim +4 -0
  165. data/app/views/renalware/events/clinical_frailty_score/_toggled_cell.html.slim +8 -0
  166. data/app/views/renalware/events/events/_table.html.slim +1 -1
  167. data/app/views/renalware/hd/current_profile/_show.html.slim +1 -1
  168. data/app/views/renalware/hd/current_profile/show.html.slim +1 -1
  169. data/app/views/renalware/hd/prescription_administrations/_form.html.slim +2 -0
  170. data/app/views/renalware/hd/sessions/_show.html.slim +1 -1
  171. data/app/views/renalware/hd/witnesses/_form.html.slim +2 -0
  172. data/app/views/renalware/letters/electronic_receipts/_table.html.slim +1 -1
  173. data/app/views/renalware/low_clearance/dashboards/show.html.slim +10 -0
  174. data/app/views/renalware/mdm/_pathology.html.slim +0 -1
  175. data/app/views/renalware/mdm/show.html.slim +1 -1
  176. data/app/views/renalware/navigation/_menu.html.slim +1 -0
  177. data/app/views/renalware/navigation/_pd.html.slim +5 -0
  178. data/app/views/renalware/pathology/charts/show.html.slim +11 -0
  179. data/app/views/renalware/pathology/current_observation_results/index.html.slim +6 -0
  180. data/app/views/renalware/pathology/historical_observation_results/_table.html.slim +4 -3
  181. data/app/views/renalware/pathology/historical_observation_results/index.html.slim +1 -1
  182. data/app/views/renalware/pathology/observations/_diff.html.slim +1 -1
  183. data/app/views/renalware/patients/patients/show.html.slim +1 -1
  184. data/app/views/renalware/pd/_exit_site_infections.html.slim +4 -0
  185. data/app/views/renalware/pd/_peritonitis_episodes.html.slim +3 -0
  186. data/app/views/renalware/pd/adequacy_completions/_filters.html.slim +19 -0
  187. data/app/views/renalware/pd/adequacy_completions/index.html.slim +4 -0
  188. data/app/views/renalware/pd/adequacy_results/_form_fields.html.slim +9 -0
  189. data/app/views/renalware/pd/adequacy_results/_table.html.slim +72 -0
  190. data/app/views/renalware/pd/adequacy_results/edit.html.slim +89 -0
  191. data/app/views/renalware/pd/adequacy_results/index.js.erb +1 -0
  192. data/app/views/renalware/pd/adequacy_results/new.html.slim +8 -0
  193. data/app/views/renalware/pd/dashboards/show.html.slim +3 -0
  194. data/app/views/renalware/pd/dashboards/show/_page_actions.html.slim +14 -0
  195. data/app/views/renalware/pd/pet_completions/_filters.html.slim +24 -0
  196. data/app/views/renalware/pd/pet_completions/index.html.slim +4 -0
  197. data/app/views/renalware/pd/pet_results/_form_fields.html.slim +12 -0
  198. data/app/views/renalware/pd/pet_results/_pathology_results.html.slim +36 -0
  199. data/app/views/renalware/pd/pet_results/_table.html.slim +62 -0
  200. data/app/views/renalware/pd/pet_results/edit.html.slim +35 -0
  201. data/app/views/renalware/pd/pet_results/index.js.erb +1 -0
  202. data/app/views/renalware/pd/pet_results/new.html.slim +8 -0
  203. data/app/views/renalware/pd/unified_pet_adequacies/_form.html.slim +22 -0
  204. data/app/views/renalware/pd/unified_pet_adequacies/new.html.slim +2 -0
  205. data/app/views/renalware/renal/profiles/show.html.slim +1 -1
  206. data/app/views/renalware/renal/registry_preflight_checks/_filters.html.slim +5 -3
  207. data/app/views/renalware/renal/registry_preflight_checks/_navigation.html.slim +1 -0
  208. data/app/views/renalware/renal/registry_preflight_checks/deaths.html.slim +2 -1
  209. data/app/views/renalware/renal/registry_preflight_checks/missing_esrf.html.slim +12 -0
  210. data/app/views/renalware/renal/registry_preflight_checks/patients.html.slim +1 -2
  211. data/app/views/renalware/surveys/dashboards/show.html.slim +2 -2
  212. data/app/views/renalware/transplants/donor_workups/show.html.slim +1 -1
  213. data/app/views/renalware/transplants/mdm/_bottom.html.slim +3 -1
  214. data/app/views/renalware/transplants/recipient_followups/show.html.slim +1 -1
  215. data/app/views/renalware/transplants/recipient_operations/show.html.slim +1 -1
  216. data/app/views/renalware/transplants/recipient_workups/show.html.slim +1 -1
  217. data/app/views/renalware/transplants/registrations/show.html.slim +1 -1
  218. data/config/initializers/inflections.rb +8 -0
  219. data/config/initializers/wicked_pdf.rb +12 -0
  220. data/config/locales/en-GB.yml +1 -1
  221. data/config/locales/renalware/events/advanced_care_plan.en.yml +12 -0
  222. data/config/locales/renalware/events/biopsy.en.yml +2 -0
  223. data/config/locales/renalware/events/clinical_frailty_score.en.yml +16 -0
  224. data/config/locales/renalware/events/clinical_frailty_score_component.en.yml +8 -0
  225. data/config/locales/renalware/nhs_number.en.yml +6 -0
  226. data/config/locales/renalware/pd/adequacy_result.en.yml +9 -0
  227. data/config/locales/renalware/pd/dashboard.en.yml +3 -0
  228. data/config/locales/renalware/pd/pet_result.en.yml +23 -0
  229. data/config/locales/renalware/renal/registry.en.yml +1 -0
  230. data/config/routes/pathology.rb +6 -0
  231. data/config/routes/pd.rb +5 -0
  232. data/config/routes/renal.rb +1 -0
  233. data/db/functions/generate_secure_id_v01.sql +1 -1
  234. data/db/migrate/20200226145010_add_unique_indexes.rb +46 -0
  235. data/db/migrate/20200421082715_add_body_surface_area_to_clinic_visits.rb +8 -0
  236. data/db/migrate/20200421132911_create_pd_pet_dextrose_concentrations.rb +13 -0
  237. data/db/migrate/20200421143546_create_pet_results.rb +66 -0
  238. data/db/migrate/20200427123229_create_adequacy_results.rb +54 -0
  239. data/db/migrate/20200616115709_add_height_weight_to_pd_adequacy_results.rb +8 -0
  240. data/db/migrate/20200618144228_add_feature_flags_to_users.rb +14 -0
  241. data/db/seeds/default/events/event_types.csv +2 -0
  242. data/lib/renalware/engine.rb +4 -2
  243. data/lib/renalware/version_number.rb +11 -0
  244. data/lib/tasks/renalware.rake +7 -1
  245. data/spec/factories/accesses/profiles.rb +1 -0
  246. data/spec/factories/events/events_types.rb +12 -0
  247. data/spec/factories/patients/patients.rb +22 -1
  248. data/spec/factories/pd/adequacy_results.rb +16 -0
  249. data/spec/factories/pd/pet_results.rb +9 -0
  250. metadata +115 -25
  251. data/app/components/renalware/events/biopsies_component.rb +0 -20
  252. data/lib/renalware/version.rb +0 -5

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