renalware-core 2.0.0.pre.beta6 → 2.0.0.pre.beta7

checksums.yaml

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data/MIT-LICENSE

@@ -0,0 +1,20 @@
+Copyright (c) 2016 Airslie Ltd
+
+Permission is hereby granted, free of charge, to any person obtaining
+a copy of this software and associated documentation files (the
+"Software"), to deal in the Software without restriction, including
+without limitation the rights to use, copy, modify, merge, publish,
+distribute, sublicense, and/or sell copies of the Software, and to
+permit persons to whom the Software is furnished to do so, subject to
+the following conditions:
+
+The above copyright notice and this permission notice shall be
+included in all copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
+EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
+MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
+NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE
+LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION
+OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION
+WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.

data/lib/renalware/version.rb

@@ -1,3 +1,3 @@
 module Renalware
-  VERSION = "2.0.0.pre.beta6".freeze
+  VERSION = "2.0.0.pre.beta7".freeze
 end

data/spec/factories/accesses/patients.rb

@@ -0,0 +1,3 @@
+FactoryGirl.define do
+  factory :accesses_patient, class: "Renalware::Accesses::Patient", parent: :patient
+end

data/spec/factories/accesses/plans.rb

@@ -0,0 +1,11 @@
+FactoryGirl.define do
+  factory :access_plan, class: Renalware::Accesses::Plan do
+    association :patient, factory: :accesses_patient
+    association :plan_type, factory: :access_plan_type
+    notes "Lorem ipsum dolor sit amet.."
+    created_by { Renalware::User.first || create(:user) }
+    updated_by { Renalware::User.first || create(:user) }
+    decided_by { Renalware::User.first || create(:user) }
+    terminated_at nil
+  end
+end

data/spec/factories/accesses/plans_types.rb

@@ -0,0 +1,5 @@
+FactoryGirl.define do
+  factory :access_plan_type, class: Renalware::Accesses::PlanType do
+    name "Continue"
+  end
+end

data/spec/factories/accesses/procedures.rb

@@ -0,0 +1,7 @@
+FactoryGirl.define do
+  factory :access_procedure, class: Renalware::Accesses::Procedure do
+    type { create(:access_type) }
+    side "R"
+    performed_on { Time.zone.today }
+  end
+end

data/spec/factories/accesses/profiles.rb

@@ -0,0 +1,14 @@
+FactoryGirl.define do
+  factory :access_profile, class: Renalware::Accesses::Profile do
+    patient
+    type { create(:access_type) }
+    side :right
+    formed_on { Time.zone.today }
+    association :created_by,  factory: :user
+    association :updated_by,  factory: :user
+
+    trait :current do
+      started_on { 1.day.ago }
+    end
+  end
+end

data/spec/factories/accesses/sites.rb

@@ -0,0 +1,6 @@
+FactoryGirl.define do
+  factory :access_site, class: Renalware::Accesses::Site do
+    name "Femoral vein line"
+    code "12"
+  end
+end

data/spec/factories/accesses/types.rb

@@ -0,0 +1,8 @@
+FactoryGirl.define do
+  factory :access_type, class: Renalware::Accesses::Type do
+    name "Tunnelled subclav"
+    abbreviation "TLN LS"
+    rr02_code "TLN"
+    rr41_code "LS"
+  end
+end

data/spec/factories/clinical/allergies.rb

@@ -0,0 +1,7 @@
+FactoryGirl.define do
+  factory :allergy, class: "Renalware::Clinical::Allergy" do
+    patient
+    description { Faker::Lorem.sentence }
+    recorded_at { Time.zone.now }
+  end
+end

data/spec/factories/clinical/body_compositions.rb

@@ -0,0 +1,23 @@
+FactoryGirl.define do
+  factory :body_composition, class: "Renalware::Clinical::BodyComposition" do
+    patient
+
+    assessed_on 1.week.ago
+    overhydration "19.1"
+    volume_of_distribution "52.1"
+    total_body_water "23.1"
+    extracellular_water "63.1"
+    intracellular_water "23.1"
+    lean_tissue_index "78.1"
+    fat_tissue_index "32.1"
+    lean_tissue_mass "32.1"
+    fat_tissue_mass "42.1"
+    adipose_tissue_mass "15.1"
+    body_cell_mass "53.1"
+    quality_of_reading "65.123"
+
+    association :assessor, factory: :user
+    association :created_by, factory: :user
+    association :updated_by, factory: :user
+  end
+end

data/spec/factories/clinical/dry_weights.rb

@@ -0,0 +1,11 @@
+FactoryGirl.define do
+  factory :dry_weight, class: "Renalware::Clinical::DryWeight" do
+    patient
+
+    assessed_on 1.week.ago
+    weight 156.1
+    association :assessor, factory: :user
+    association :created_by,  factory: :user
+    association :updated_by,  factory: :user
+  end
+end

data/spec/factories/clinical/patients.rb

@@ -0,0 +1,3 @@
+FactoryGirl.define do
+  factory :clinical_patient, class: "Renalware::Clinical::Patient", parent: :patient
+end

data/spec/factories/clinics/appointments.rb

@@ -0,0 +1,8 @@
+FactoryGirl.define do
+  factory :appointment, class: "Renalware::Clinics::Appointment" do
+    patient
+    clinic
+    starts_at Time.zone.now
+    association :user
+  end
+end

data/spec/factories/clinics/clinic_visits.rb

@@ -0,0 +1,16 @@
+FactoryGirl.define do
+  factory :clinic_visit, class: "Renalware::Clinics::ClinicVisit" do
+    patient
+    date Time.zone.today
+    time Time.zone.now
+    did_not_attend false
+    height 1725
+    weight 6985
+    pulse 100
+    systolic_bp 112
+    diastolic_bp 71
+    clinic
+    association :created_by, factory: :user
+    association :updated_by, factory: :user
+  end
+end

data/spec/factories/clinics/clinics.rb

@@ -0,0 +1,6 @@
+FactoryGirl.define do
+  factory :clinic, class: "Renalware::Clinics::Clinic" do
+    name "Access"
+    association :consultant, factory: :user
+  end
+end

data/spec/factories/deaths/cause.rb

@@ -0,0 +1,6 @@
+FactoryGirl.define do
+  factory :cause, class: "Renalware::Deaths::Cause" do
+    code "12"
+    description "Hyperkalaemia"
+  end
+end

data/spec/factories/deaths/modality_descriptions.rb

@@ -0,0 +1,5 @@
+FactoryGirl.define do
+  factory :death_modality_description, class: "Renalware::Deaths::ModalityDescription" do
+    name "Death"
+  end
+end

data/spec/factories/directory/people.rb

@@ -0,0 +1,9 @@
+FactoryGirl.define do
+  factory :directory_person, class: "Renalware::Directory::Person" do
+    given_name   { Faker::Name.first_name }
+    family_name  { Faker::Name.last_name }
+    title        { Faker::Name.prefix }
+    association :created_by, factory: :user
+    association :updated_by, factory: :user
+  end
+end

data/spec/factories/drugs/drug.rb

@@ -0,0 +1,5 @@
+FactoryGirl.define do
+  factory :drug, class: "Renalware::Drugs::Drug" do
+    name "Blue Pill"
+  end
+end

data/spec/factories/drugs/drug_types.rb

@@ -0,0 +1,6 @@
+FactoryGirl.define do
+  factory :drug_type, class: "Renalware::Drugs::Type" do
+    code "immuno"
+    name "Immunosuppressant"
+  end
+end

data/spec/factories/events/events.rb

@@ -0,0 +1,26 @@
+FactoryGirl.define do
+  factory :event, class: "Renalware::Events::Event" do
+    patient
+    event_type factory: :events_type
+    date_time Time.zone.now
+    description "Needs blood sample taken."
+    notes "Would like son to accompany them on clinic visit."
+    association :created_by, factory: :user
+    association :updated_by, factory: :user
+
+    factory :simple_event, class: "Renalware::Events::Simple" do
+
+    end
+
+    factory :swab, class: "Renalware::Events::Swab" do
+      event_type factory: :swab_event_type
+      document {
+        {
+          type: Renalware::Events::Swab::Document.type.values.first,
+          result: Renalware::Events::Swab::Document.result.values.first,
+          location: "The location"
+        }
+      }
+    end
+  end
+end

data/spec/factories/events/events_types.rb

@@ -0,0 +1,16 @@
+FactoryGirl.define do
+  factory :events_type, class: "Renalware::Events::Type" do
+    name "Access--Clinic"
+
+    factory :swab_event_type do
+      name "Swab"
+      event_class_name "Renalware::Events::Swab"
+      slug "swabs"
+    end
+
+    factory :pd_line_change_event_type do
+      name "PD Line Change"
+      slug "pd_line_changes"
+    end
+  end
+end

data/spec/factories/hd/cannulation_types.rb

@@ -0,0 +1,5 @@
+FactoryGirl.define do
+  factory :hd_cannulation_type, class: "Renalware::HD::CannulationType" do
+    name "Buttonhole"
+  end
+end

data/spec/factories/hd/dialysers.rb

@@ -0,0 +1,6 @@
+FactoryGirl.define do
+  factory :hd_dialyser, class: "Renalware::HD::Dialyser" do
+    group "FX"
+    name "FX80"
+  end
+end

data/spec/factories/hd/hd_session_document.rb

@@ -0,0 +1,69 @@
+# A word about using FactoryGirl to build document (jsonb) objects:
+#
+# The best solution I can find is to use OpenStructs to build each
+# nested part, compose these in the top level document (e.g. SessionDocument)
+# using `strategy: :marshal_dump`.
+# When consuming in an AR-based factory, uses an after_build callback for example
+#
+#   Factory :hd_closed_session, class: "Renalware::HD::Session::Closed" do
+#     after(:build) do |session|
+#        session.document = build(:hd_session_document).marshal_dump
+#     end
+#   end
+#
+# The support/factory_girl.rb for the definition of MarshalDumpStrategy
+#
+FactoryGirl.define do
+  factory :blood_pressure, class: OpenStruct do
+    systolic 100
+    diastolic 80
+  end
+
+  factory :hd_session_document_info, class: OpenStruct do
+    hd_type "hd"
+    machine_no 222
+    access_side "right"
+    access_type "Arteriovenous graft (AVG)"
+    access_type_abbreviation "AVG"
+    access_confirmed true
+    single_needle "no"
+    lines_reversed "no"
+    fistula_plus_line "no"
+    dialysis_fluid_used "a10"
+    is_access_first_use "no"
+  end
+
+  factory :hd_session_document_dialysis, class: OpenStruct do
+    flow_rate 200
+    blood_flow 150
+    machine_ktv 1.0
+    machine_urr 1
+    fluid_removed 1.0
+    venous_pressure 1
+    litres_processed 1.0
+    arterial_pressure 1
+  end
+
+  factory :hd_session_document_observations_before, class: OpenStruct do
+    pulse 37
+    weight 100.0
+    bm_stix 1.0
+    temperature 36.0
+    blood_pressure factory: :blood_pressure, strategy: :marshal_dump
+  end
+
+  factory :hd_session_document_observations_after, class: OpenStruct do
+    pulse 36
+    weight 99.0
+    bm_stix 0.9
+    temperature 35.0
+    blood_pressure factory: :blood_pressure, strategy: :marshal_dump
+  end
+
+  factory :hd_session_document, class: OpenStruct do
+    info factory: :hd_session_document_info, strategy: :marshal_dump
+    dialysis factory: :hd_session_document_dialysis, strategy: :marshal_dump
+    observations_before factory: :hd_session_document_observations_before, strategy: :marshal_dump
+    observations_after factory: :hd_session_document_observations_after, strategy: :marshal_dump
+  end
+end

data/spec/factories/hd/modality_descriptions.rb

@@ -0,0 +1,5 @@
+FactoryGirl.define do
+  factory :hd_modality_description, class: "Renalware::HD::ModalityDescription" do
+    initialize_with { Renalware::HD::ModalityDescription.find_or_create_by(name: "HD") }
+  end
+end

data/spec/factories/hd/patient_statistics.rb

@@ -0,0 +1,8 @@
+FactoryGirl.define do
+  factory :hd_patient_statistics, class: "Renalware::HD::PatientStatistics" do
+    patient factory: :hd_patient
+    association :hospital_unit, factory: :hospital_unit
+    month 0 # rolling
+    year 0  # rolling
+  end
+end

data/spec/factories/hd/patients.rb

@@ -0,0 +1,3 @@
+FactoryGirl.define do
+  factory :hd_patient, class: "Renalware::HD::Patient", parent: :patient
+end

data/spec/factories/hd/preference_sets.rb

@@ -0,0 +1,10 @@
+FactoryGirl.define do
+  factory :hd_preference_set, class: "Renalware::HD::PreferenceSet" do
+    patient
+    association :hospital_unit, factory: :hospital_unit
+    schedule :mon_wed_fri_pm
+    other_schedule ""
+    association :created_by,  factory: :user
+    association :updated_by,  factory: :user
+  end
+end

data/spec/factories/hd/profiles.rb

@@ -0,0 +1,18 @@
+FactoryGirl.define do
+  factory :hd_profile, class: "Renalware::HD::Profile" do
+    patient
+    active true
+    association :hospital_unit, factory: :hospital_unit
+    association :prescriber, factory: :user
+    association :created_by,  factory: :user
+    association :updated_by,  factory: :user
+
+    document {
+      {
+        dialysis: {
+          hd_type: :hd
+        }
+      }
+    }
+  end
+end

data/spec/factories/hd/sessions.rb

@@ -0,0 +1,34 @@
+FactoryGirl.define do
+  factory :hd_session, class: "Renalware::HD::Session::Open" do
+    association :patient, factory: :hd_patient
+    association :hospital_unit, factory: :hospital_unit
+    association :signed_on_by, factory: :user
+    association :created_by, factory: :user
+
+    performed_on 1.week.ago
+    notes "Some notes"
+
+    factory :hd_open_session do
+      start_time "11:00"
+    end
+
+    factory :hd_dna_session, class: "Renalware::HD::Session::DNA" do
+      document {
+        {
+          patient_on_holiday: "yes"
+        }
+      }
+    end
+
+    factory :hd_closed_session, class: "Renalware::HD::Session::Closed" do
+      start_time "11:00"
+      end_time "16:00"
+      signed_off_at { 1.day.ago }
+      association :signed_off_by, factory: :user
+
+      after(:build) do |session|
+        session.document = build(:hd_session_document).marshal_dump
+      end
+    end
+  end
+end