renalware-core 2.0.0.pre.beta6 → 2.0.0.pre.beta7

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Files changed (199) hide show
  1. checksums.yaml +4 -4
  2. data/MIT-LICENSE +20 -0
  3. data/lib/renalware/version.rb +1 -1
  4. data/spec/factories/accesses/patients.rb +3 -0
  5. data/spec/factories/accesses/plans.rb +11 -0
  6. data/spec/factories/accesses/plans_types.rb +5 -0
  7. data/spec/factories/accesses/procedures.rb +7 -0
  8. data/spec/factories/accesses/profiles.rb +14 -0
  9. data/spec/factories/accesses/sites.rb +6 -0
  10. data/spec/factories/accesses/types.rb +8 -0
  11. data/spec/factories/clinical/allergies.rb +7 -0
  12. data/spec/factories/clinical/body_compositions.rb +23 -0
  13. data/spec/factories/clinical/dry_weights.rb +11 -0
  14. data/spec/factories/clinical/patients.rb +3 -0
  15. data/spec/factories/clinics/appointments.rb +8 -0
  16. data/spec/factories/clinics/clinic_visits.rb +16 -0
  17. data/spec/factories/clinics/clinics.rb +6 -0
  18. data/spec/factories/deaths/cause.rb +6 -0
  19. data/spec/factories/deaths/modality_descriptions.rb +5 -0
  20. data/spec/factories/directory/people.rb +9 -0
  21. data/spec/factories/drugs/drug.rb +5 -0
  22. data/spec/factories/drugs/drug_types.rb +6 -0
  23. data/spec/factories/events/events.rb +26 -0
  24. data/spec/factories/events/events_types.rb +16 -0
  25. data/spec/factories/hd/cannulation_types.rb +5 -0
  26. data/spec/factories/hd/dialysers.rb +6 -0
  27. data/spec/factories/hd/hd_session_document.rb +69 -0
  28. data/spec/factories/hd/modality_descriptions.rb +5 -0
  29. data/spec/factories/hd/patient_statistics.rb +8 -0
  30. data/spec/factories/hd/patients.rb +3 -0
  31. data/spec/factories/hd/preference_sets.rb +10 -0
  32. data/spec/factories/hd/profiles.rb +18 -0
  33. data/spec/factories/hd/sessions.rb +34 -0
  34. data/spec/factories/hd/stations.rb +5 -0
  35. data/spec/factories/hospitals/centres.rb +6 -0
  36. data/spec/factories/hospitals/units.rb +15 -0
  37. data/spec/factories/letters/archives.rb +5 -0
  38. data/spec/factories/letters/contact_descriptions.rb +16 -0
  39. data/spec/factories/letters/contacts.rb +5 -0
  40. data/spec/factories/letters/descriptions.rb +5 -0
  41. data/spec/factories/letters/letterheads.rb +10 -0
  42. data/spec/factories/letters/letters.rb +25 -0
  43. data/spec/factories/letters/patients.rb +3 -0
  44. data/spec/factories/letters/primary_care_physicians.rb +5 -0
  45. data/spec/factories/letters/recipients.rb +11 -0
  46. data/spec/factories/medications/medication_route.rb +11 -0
  47. data/spec/factories/medications/prescription.rb +17 -0
  48. data/spec/factories/medications/prescription_terminations.rb +7 -0
  49. data/spec/factories/medications/prescription_version.rb +4 -0
  50. data/spec/factories/messaging/authors.rb +5 -0
  51. data/spec/factories/messaging/message.rb +11 -0
  52. data/spec/factories/messaging/patients.rb +5 -0
  53. data/spec/factories/messaging/receipt.rb +7 -0
  54. data/spec/factories/messaging/recipients.rb +5 -0
  55. data/spec/factories/modalities/modalities.rb +27 -0
  56. data/spec/factories/modalities/modality_descriptions.rb +34 -0
  57. data/spec/factories/modalities/modality_reasons.rb +20 -0
  58. data/spec/factories/pathology/consultant.rb +3 -0
  59. data/spec/factories/pathology/lab.rb +5 -0
  60. data/spec/factories/pathology/measurement_units.rb +8 -0
  61. data/spec/factories/pathology/observation_descriptions.rb +7 -0
  62. data/spec/factories/pathology/observation_requests.rb +8 -0
  63. data/spec/factories/pathology/observations.rb +8 -0
  64. data/spec/factories/pathology/patients.rb +3 -0
  65. data/spec/factories/pathology/request_descriptions.rb +6 -0
  66. data/spec/factories/pathology/requests/drug_category.rb +6 -0
  67. data/spec/factories/pathology/requests/global_rule.rb +7 -0
  68. data/spec/factories/pathology/requests/global_rule_set.rb +6 -0
  69. data/spec/factories/pathology/requests/patient_rule.rb +13 -0
  70. data/spec/factories/pathology/requests/request.rb +10 -0
  71. data/spec/factories/patients/alerts.rb +8 -0
  72. data/spec/factories/patients/bookmarks.rb +6 -0
  73. data/spec/factories/patients/ethnicities.rb +6 -0
  74. data/spec/factories/patients/languages.rb +5 -0
  75. data/spec/factories/patients/patients.rb +32 -0
  76. data/spec/factories/patients/practices.rb +17 -0
  77. data/spec/factories/patients/primary_care_physicians.rb +21 -0
  78. data/spec/factories/patients/religions.rb +5 -0
  79. data/spec/factories/patients/users.rb +3 -0
  80. data/spec/factories/pd/assessments.rb +22 -0
  81. data/spec/factories/pd/bag_types.rb +17 -0
  82. data/spec/factories/pd/episode_types.rb +6 -0
  83. data/spec/factories/pd/exit_site_infections.rb +9 -0
  84. data/spec/factories/pd/fluid_descriptions.rb +6 -0
  85. data/spec/factories/pd/infection_organisms.rb +10 -0
  86. data/spec/factories/pd/modality_descriptions.rb +5 -0
  87. data/spec/factories/pd/organism_codes.rb +6 -0
  88. data/spec/factories/pd/patients.rb +3 -0
  89. data/spec/factories/pd/pd_regimes.rb +36 -0
  90. data/spec/factories/pd/peritonitis_episode_type_descriptions.rb +8 -0
  91. data/spec/factories/pd/peritonitis_episodes.rb +20 -0
  92. data/spec/factories/pd/pet_adequacies.rb +38 -0
  93. data/spec/factories/pd/regime_bags.rb +44 -0
  94. data/spec/factories/pd/systems.rb +11 -0
  95. data/spec/factories/pd/training_sessions.rb +16 -0
  96. data/spec/factories/pd/training_sites.rb +6 -0
  97. data/spec/factories/pd/training_types.rb +5 -0
  98. data/spec/factories/problems/problems.rb +7 -0
  99. data/spec/factories/renal/patients.rb +3 -0
  100. data/spec/factories/renal/prd_description.rb +6 -0
  101. data/spec/factories/renal/profiles.rb +5 -0
  102. data/spec/factories/reporting/audits.rb +8 -0
  103. data/spec/factories/snippets/snippets.rb +6 -0
  104. data/spec/factories/snippets/users.rb +4 -0
  105. data/spec/factories/system/addresses.rb +11 -0
  106. data/spec/factories/system/roles.rb +27 -0
  107. data/spec/factories/system/templates.rb +15 -0
  108. data/spec/factories/system/users.rb +58 -0
  109. data/spec/factories/transplants/donations.rb +8 -0
  110. data/spec/factories/transplants/donor_stage.rb +12 -0
  111. data/spec/factories/transplants/donor_stage_position.rb +5 -0
  112. data/spec/factories/transplants/donor_stage_status.rb +5 -0
  113. data/spec/factories/transplants/live_donor_modality_description.rb +6 -0
  114. data/spec/factories/transplants/modality_descriptions.rb +10 -0
  115. data/spec/factories/transplants/patients.rb +3 -0
  116. data/spec/factories/transplants/recipient_followups.rb +4 -0
  117. data/spec/factories/transplants/recipient_operations.rb +15 -0
  118. data/spec/factories/transplants/registration_status_descriptions.rb +7 -0
  119. data/spec/factories/transplants/registration_statuses.rb +9 -0
  120. data/spec/factories/transplants/registrations.rb +46 -0
  121. data/spec/support/capybara_helper.rb +9 -0
  122. data/spec/support/database_cleaner.rb +18 -0
  123. data/spec/support/date_helpers.rb +9 -0
  124. data/spec/support/devise_spec_helper.rb +29 -0
  125. data/spec/support/drugs_spec_helper.rb +49 -0
  126. data/spec/support/factory_girl.rb +29 -0
  127. data/spec/support/json_helpers.rb +5 -0
  128. data/spec/support/letters_spec_helper.rb +36 -0
  129. data/spec/support/login_macros.rb +26 -0
  130. data/spec/support/matchers/document.rb +5 -0
  131. data/spec/support/matchers/validate_timeliness_of.rb +16 -0
  132. data/spec/support/pathology_spec_helper.rb +37 -0
  133. data/spec/support/patients_spec_helper.rb +16 -0
  134. data/spec/support/poltergeist.rb +2 -0
  135. data/spec/support/pundit_matcher.rb +13 -0
  136. data/spec/support/roles_spec_helper.rb +7 -0
  137. data/spec/support/select2_spec_helper.rb +13 -0
  138. data/spec/support/select_date_spec_helper.rb +11 -0
  139. data/spec/support/shared_contexts/a_global_rule_set.rb +19 -0
  140. data/spec/support/translations.rb +12 -0
  141. data/spec/support/travel.rb +7 -0
  142. data/spec/support/webmock.rb +3 -0
  143. metadata +142 -58
  144. data/vendor/xsd/ukrdc/README.md +0 -9
  145. data/vendor/xsd/ukrdc/Schema/Allergies/Allergy.xsd +0 -69
  146. data/vendor/xsd/ukrdc/Schema/ClinicalRelationships/ClinicalRelationship.xsd +0 -27
  147. data/vendor/xsd/ukrdc/Schema/Diagnoses/CauseOfDeath.xsd +0 -32
  148. data/vendor/xsd/ukrdc/Schema/Diagnoses/Diagnosis.xsd +0 -41
  149. data/vendor/xsd/ukrdc/Schema/Diagnoses/RenalDiagnosis.xsd +0 -41
  150. data/vendor/xsd/ukrdc/Schema/Documents/Document.xsd +0 -72
  151. data/vendor/xsd/ukrdc/Schema/Encounters/Encounter.xsd +0 -121
  152. data/vendor/xsd/ukrdc/Schema/Encounters/TransplantList.xsd +0 -108
  153. data/vendor/xsd/ukrdc/Schema/Encounters/Treatment.xsd +0 -207
  154. data/vendor/xsd/ukrdc/Schema/FamilyHistories/FamilyHistory.xsd +0 -42
  155. data/vendor/xsd/ukrdc/Schema/LabOrders/LabOrder.xsd +0 -181
  156. data/vendor/xsd/ukrdc/Schema/Medications/Medication.xsd +0 -88
  157. data/vendor/xsd/ukrdc/Schema/Observations/Observation.xsd +0 -65
  158. data/vendor/xsd/ukrdc/Schema/Patient.xsd +0 -87
  159. data/vendor/xsd/ukrdc/Schema/Procedures/DialysisSession.xsd +0 -61
  160. data/vendor/xsd/ukrdc/Schema/Procedures/Procedure.xsd +0 -38
  161. data/vendor/xsd/ukrdc/Schema/Procedures/Transplant.xsd +0 -160
  162. data/vendor/xsd/ukrdc/Schema/Procedures/VascularAccess.xsd +0 -49
  163. data/vendor/xsd/ukrdc/Schema/ProgramMemberships/ProgramMembership.xsd +0 -46
  164. data/vendor/xsd/ukrdc/Schema/README.md +0 -1
  165. data/vendor/xsd/ukrdc/Schema/SocialHistories/SocialHistory.xsd +0 -15
  166. data/vendor/xsd/ukrdc/Schema/Surveys/Survey.xsd +0 -143
  167. data/vendor/xsd/ukrdc/Schema/Types/ActionCode.xsd +0 -37
  168. data/vendor/xsd/ukrdc/Schema/Types/Address.xsd +0 -67
  169. data/vendor/xsd/ukrdc/Schema/Types/CF_DMD.xsd +0 -27
  170. data/vendor/xsd/ukrdc/Schema/Types/CF_EDTA_COD.xsd +0 -343
  171. data/vendor/xsd/ukrdc/Schema/Types/CF_EDTA_PRD.xsd +0 -356
  172. data/vendor/xsd/ukrdc/Schema/Types/CF_HL7_0004.xsd +0 -76
  173. data/vendor/xsd/ukrdc/Schema/Types/CF_HL7_00204.xsd +0 -46
  174. data/vendor/xsd/ukrdc/Schema/Types/CF_HL7_00206.xsd +0 -41
  175. data/vendor/xsd/ukrdc/Schema/Types/CF_RR1.xsd +0 -567
  176. data/vendor/xsd/ukrdc/Schema/Types/CF_RR23.xsd +0 -82
  177. data/vendor/xsd/ukrdc/Schema/Types/CF_RR7_Discharge.xsd +0 -80
  178. data/vendor/xsd/ukrdc/Schema/Types/CF_RR7_Treatment.xsd +0 -241
  179. data/vendor/xsd/ukrdc/Schema/Types/CF_SNOMED.xsd +0 -27
  180. data/vendor/xsd/ukrdc/Schema/Types/Clinician.xsd +0 -27
  181. data/vendor/xsd/ukrdc/Schema/Types/CodeTableDetail.xsd +0 -27
  182. data/vendor/xsd/ukrdc/Schema/Types/CodedField.xsd +0 -27
  183. data/vendor/xsd/ukrdc/Schema/Types/CommonMetadata.xsd +0 -23
  184. data/vendor/xsd/ukrdc/Schema/Types/ContactDetail.xsd +0 -55
  185. data/vendor/xsd/ukrdc/Schema/Types/DrugProduct.xsd +0 -41
  186. data/vendor/xsd/ukrdc/Schema/Types/EthnicGroup.xsd +0 -114
  187. data/vendor/xsd/ukrdc/Schema/Types/FamilyDoctor.xsd +0 -21
  188. data/vendor/xsd/ukrdc/Schema/Types/LabResultItem.xsd +0 -160
  189. data/vendor/xsd/ukrdc/Schema/Types/LabTestItem.xsd +0 -24
  190. data/vendor/xsd/ukrdc/Schema/Types/Language.xsd +0 -981
  191. data/vendor/xsd/ukrdc/Schema/Types/Location.xsd +0 -27
  192. data/vendor/xsd/ukrdc/Schema/Types/NV_RR14.xsd +0 -39
  193. data/vendor/xsd/ukrdc/Schema/Types/Name.xsd +0 -51
  194. data/vendor/xsd/ukrdc/Schema/Types/Occupation.xsd +0 -75
  195. data/vendor/xsd/ukrdc/Schema/Types/Order.xsd +0 -48
  196. data/vendor/xsd/ukrdc/Schema/Types/PatientNumber.xsd +0 -90
  197. data/vendor/xsd/ukrdc/Schema/Types/PersonalContactType.xsd +0 -11
  198. data/vendor/xsd/ukrdc/Schema/Types/Result.xsd +0 -178
  199. data/vendor/xsd/ukrdc/Schema/UKRDC.xsd +0 -148
data/vendor/xsd/ukrdc/Schema/UKRDC.xsd DELETED
@@ -1,148 +0,0 @@
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- <!-- edited with XMLSpy v2015 rel. 4 (x64) (http://www.altova.com) by Nick Jones (Agiloak Limited) -->
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- <xs:schema xmlns="http://www.rixg.org.uk/" xmlns:xs="http://www.w3.org/2001/XMLSchema" targetNamespace="http://www.rixg.org.uk/">
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- <xs:include schemaLocation="Patient.xsd"/>
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- <xs:include schemaLocation="LabOrders/LabOrder.xsd"/>
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- <xs:include schemaLocation="SocialHistories/SocialHistory.xsd"/>
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- <xs:include schemaLocation="FamilyHistories/FamilyHistory.xsd"/>
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- <xs:include schemaLocation="Observations/Observation.xsd"/>
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- <xs:include schemaLocation="Allergies/Allergy.xsd"/>
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- <xs:include schemaLocation="Procedures/Procedure.xsd"/>
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- <xs:include schemaLocation="Procedures/DialysisSession.xsd"/>
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- <xs:include schemaLocation="Procedures/Transplant.xsd"/>
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- <xs:include schemaLocation="Procedures/VascularAccess.xsd"/>
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- <xs:include schemaLocation="Diagnoses/Diagnosis.xsd"/>
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- <xs:include schemaLocation="Diagnoses/CauseOfDeath.xsd"/>
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- <xs:include schemaLocation="Diagnoses/RenalDiagnosis.xsd"/>
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- <xs:include schemaLocation="Documents/Document.xsd"/>
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- <xs:include schemaLocation="Encounters/Encounter.xsd"/>
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- <xs:include schemaLocation="Encounters/Treatment.xsd"/>
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- <xs:include schemaLocation="Encounters/TransplantList.xsd"/>
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- <xs:include schemaLocation="ProgramMemberships/ProgramMembership.xsd"/>
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- <xs:include schemaLocation="ClinicalRelationships/ClinicalRelationship.xsd"/>
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- <xs:include schemaLocation="Medications/Medication.xsd"/>
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- <xs:include schemaLocation="Surveys/Survey.xsd"/>
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- <!-- SDA: Container -->
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- <xs:element name="PatientRecord">
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- <xs:complexType>
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- <xs:sequence>
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- <xs:element name="SendingFacility">
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- <xs:complexType>
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- <xs:simpleContent>
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- <xs:extension base="xs:string">
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- <xs:attribute name="channelName"/>
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- <xs:attribute name="channelId"/>
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- <xs:attribute name="time"/>
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- </xs:extension>
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- </xs:simpleContent>
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- </xs:complexType>
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- </xs:element>
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- <xs:element name="Patient" type="Patient" minOccurs="1"/>
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- <xs:element name="LabOrders" minOccurs="0">
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- <xs:complexType>
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- <xs:sequence>
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- <xs:element name="LabOrder" type="LabOrder" minOccurs="0" maxOccurs="unbounded"/>
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- </xs:sequence>
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- <xs:attribute name="start" type="xs:date" use="required"/>
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- <xs:attribute name="stop" type="xs:date" use="required"/>
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- </xs:complexType>
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- </xs:element>
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- <xs:element name="SocialHistories" minOccurs="0">
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- <xs:complexType>
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- <xs:sequence>
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- <xs:element name="SocialHistory" type="SocialHistory" minOccurs="0" maxOccurs="unbounded"/>
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- </xs:sequence>
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- </xs:complexType>
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- </xs:element>
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- <xs:element name="FamilyHistories" minOccurs="0">
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- <xs:complexType>
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- <xs:sequence>
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- <xs:element name="FamilyHistory" type="FamilyHistory" minOccurs="0" maxOccurs="unbounded"/>
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- </xs:sequence>
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- </xs:complexType>
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- </xs:element>
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- <xs:element name="Observations" minOccurs="0">
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- <xs:complexType>
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- <xs:sequence>
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- <xs:element name="Observation" type="Observation" minOccurs="0" maxOccurs="unbounded"/>
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- </xs:sequence>
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- <xs:attribute name="start" type="xs:date" use="required"/>
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- <xs:attribute name="stop" type="xs:date" use="required"/>
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- </xs:complexType>
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- </xs:element>
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- <xs:element name="Allergies" minOccurs="0">
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- <xs:complexType>
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- <xs:sequence>
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- <xs:element name="Allergy" type="Allergy" minOccurs="0" maxOccurs="unbounded"/>
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- </xs:sequence>
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- </xs:complexType>
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- </xs:element>
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- <xs:element name="Diagnoses" minOccurs="0">
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- <xs:complexType>
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- <xs:sequence>
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- <xs:element name="Diagnosis" type="Diagnosis" minOccurs="0" maxOccurs="unbounded"/>
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- <xs:element name="CauseOfDeath" type="CauseOfDeath" minOccurs="0" maxOccurs="unbounded"/>
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- <xs:element name="RenalDiagnosis" type="RenalDiagnosis" minOccurs="0" maxOccurs="unbounded"/>
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- </xs:sequence>
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- </xs:complexType>
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- </xs:element>
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- <xs:element name="Medications" minOccurs="0">
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- <xs:complexType>
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- <xs:sequence>
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- <xs:element name="Medication" type="Medication" minOccurs="0" maxOccurs="unbounded"/>
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- </xs:sequence>
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- </xs:complexType>
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- </xs:element>
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- <xs:element name="Procedures" minOccurs="0">
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- <xs:complexType>
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- <xs:sequence>
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- <xs:element name="Procedure" type="Procedure" minOccurs="0" maxOccurs="unbounded"/>
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- <xs:element name="DialysisSession" type="DialysisSession" minOccurs="0" maxOccurs="unbounded"/>
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- <xs:element name="Transplant" type="TransplantProcedure" minOccurs="0" maxOccurs="unbounded"/>
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- <xs:element name="VascularAccess" type="VascularAccess" minOccurs="0" maxOccurs="unbounded"/>
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- </xs:sequence>
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- </xs:complexType>
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- </xs:element>
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- <xs:element name="Documents" minOccurs="0">
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- <xs:complexType>
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- <xs:sequence>
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- <xs:element name="Document" type="Document" minOccurs="0" maxOccurs="unbounded"/>
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- </xs:sequence>
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- </xs:complexType>
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- </xs:element>
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- <xs:element name="Encounters" minOccurs="0">
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- <xs:complexType>
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- <xs:sequence>
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- <xs:element name="Encounter" type="Encounter" minOccurs="0" maxOccurs="unbounded"/>
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- <!-- SDA: Encounter -->
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- <xs:element name="Treatment" type="Treatment" minOccurs="0" maxOccurs="unbounded"/>
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- <!-- SDA: Encounter -->
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- <xs:element name="TransplantList" type="TransplantList" minOccurs="0" maxOccurs="unbounded"/>
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- </xs:sequence>
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- </xs:complexType>
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- </xs:element>
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- <xs:element name="ProgramMemberships" minOccurs="0">
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- <xs:complexType>
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- <xs:sequence>
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- <xs:element name="ProgramMembership" type="ProgramMembership" minOccurs="0" maxOccurs="unbounded"/>
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- </xs:sequence>
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- </xs:complexType>
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- </xs:element>
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- <xs:element name="ClinicalRelationships" minOccurs="0">
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- <xs:complexType>
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- <xs:sequence>
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- <xs:element name="ClinicalRelationship" type="ClinicalRelationship" minOccurs="0" maxOccurs="unbounded"/>
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- </xs:sequence>
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- </xs:complexType>
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- </xs:element>
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- <!-- Custom SDA below here -->
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- <xs:element name="Surveys" minOccurs="0">
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- <xs:complexType>
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- <xs:sequence>
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- <xs:element name="Survey" type="Survey" minOccurs="0" maxOccurs="unbounded"/>
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- </xs:sequence>
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- </xs:complexType>
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- </xs:element>
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- </xs:sequence>
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- </xs:complexType>
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- </xs:element>
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- </xs:schema>