rbbt-views 0.1.2 → 1.0.0

data/share/views/result.haml

@@ -1,5 +1,5 @@
 - if locals.include? :jobname or locals.include? "jobname"
-  = workflow_partial(workflow, task_name, "partials/_job_control", locals)
+  = workflow_partial("partials/_job_control", workflow, task, locals)
 
 - result_type = result_type.to_sym if String === result_type
 - case result_type
@@ -34,5 +34,5 @@
       - result.each do |res|
         %li= res
 - when :tsv
-  = workflow_partial(workflow, task_name, "partials/_result_table", locals.merge(:page => "1"))
+  = workflow_partial("partials/_result_table", workflow, task, locals.merge(:page => "1"))
 

metadata

@@ -1,13 +1,13 @@
 --- !ruby/object:Gem::Specification 
 name: rbbt-views
 version: !ruby/object:Gem::Version 
-  hash: 31
+  hash: 23
   prerelease: 
   segments: 
-  - 0
   - 1
-  - 2
-  version: 0.1.2
+  - 0
+  - 0
+  version: 1.0.0
 platform: ruby
 authors: 
 - Miguel Vazquez
@@ -15,7 +15,7 @@ autorequire:
 bindir: bin
 cert_chain: []
 
-date: 2011-10-03 00:00:00 +02:00
+date: 2012-01-13 00:00:00 +01:00
 default_executable: 
 dependencies: 
 - !ruby/object:Gem::Dependency 
@@ -114,7 +114,9 @@ files:
 - lib/rbbt/workflow/rest.rb
 - lib/rbbt/workflow/rest/auth.rb
 - lib/rbbt/workflow/rest/client.rb
+- lib/rbbt/workflow/rest/email.rb
 - lib/rbbt/workflow/rest/entity.rb
+- lib/rbbt/workflow/rest/helpers.rb
 - lib/rbbt/workflow/rest/render.rb
 - lib/rbbt/workflow/rest/util.rb
 - share/views/compass/_base.sass
@@ -125,18 +127,149 @@ files:
 - share/views/compass/main.sass
 - share/views/compass/screen.sass
 - share/views/dependencies.haml
+- share/views/entity/GOTerm.haml
 - share/views/entity/Gene.haml
+- share/views/entity/GenomicMutation.haml
+- share/views/entity/KeggPathway.haml
+- share/views/entity/MutatedIsoform.haml
+- share/views/entity/NCIBioCartaPathways.haml
+- share/views/entity/NCINaturePathways.haml
+- share/views/entity/NCIReactomePathways.haml
+- share/views/entity/PfamDomain.haml
+- share/views/entity_list/Default.haml
 - share/views/error.haml
 - share/views/files.haml
 - share/views/form.haml
+- share/views/front.haml
 - share/views/info.haml
 - share/views/job_list.haml
 - share/views/js/app.js
 - share/views/layout.haml
 - share/views/partials/_context_control.haml
+- share/views/partials/_form.haml
 - share/views/partials/_job_control.haml
 - share/views/partials/_result_table.haml
 - share/views/partials/_result_table_controls.haml
+- share/views/partials/_table.haml
+- share/views/public/favicon.gif
+- share/views/public/plugins/jmol/CHANGES.txt
+- share/views/public/plugins/jmol/COPYRIGHT.txt
+- share/views/public/plugins/jmol/ChimeToJmol.jar
+- share/views/public/plugins/jmol/Jmol.jar
+- share/views/public/plugins/jmol/Jmol.js
+- share/views/public/plugins/jmol/JmolApplet.jar
+- share/views/public/plugins/jmol/JmolApplet0.jar
+- share/views/public/plugins/jmol/JmolApplet0_Console.jar
+- share/views/public/plugins/jmol/JmolApplet0_Minimize.jar
+- share/views/public/plugins/jmol/JmolApplet0_Popup.jar
+- share/views/public/plugins/jmol/JmolApplet0_ReadersCifPdb.jar
+- share/views/public/plugins/jmol/JmolApplet0_ReadersMolXyz.jar
+- share/views/public/plugins/jmol/JmolApplet0_ReadersMore.jar
+- share/views/public/plugins/jmol/JmolApplet0_ReadersQuantum.jar
+- share/views/public/plugins/jmol/JmolApplet0_ReadersSimple.jar
+- share/views/public/plugins/jmol/JmolApplet0_ReadersXml.jar
+- share/views/public/plugins/jmol/JmolApplet0_ReadersXtal.jar
+- share/views/public/plugins/jmol/JmolApplet0_ShapeBio.jar
+- share/views/public/plugins/jmol/JmolApplet0_ShapeSpecial.jar
+- share/views/public/plugins/jmol/JmolApplet0_ShapeSurface.jar
+- share/views/public/plugins/jmol/JmolApplet0_Smiles.jar
+- share/views/public/plugins/jmol/JmolApplet0_Symmetry.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_ar.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_bs.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_ca.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_cs.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_da.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_de.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_el.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_en_GB.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_es.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_et.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_fi.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_fr.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_fy.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_hu.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_hy.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_id.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_it.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_jv.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_ko.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_ms.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_nb.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_nl.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_oc.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_pl.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_pt.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_pt_BR.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_ru.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_sl.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_sv.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_ta.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_te.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_tr.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_uk.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_zh_CN.jar
+- share/views/public/plugins/jmol/JmolApplet0_i18n_zh_TW.jar
+- share/views/public/plugins/jmol/JmolAppletSigned.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_Console.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_Minimize.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_MultiTouch.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_Popup.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_ReadersCifPdb.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_ReadersMolXyz.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_ReadersMore.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_ReadersQuantum.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_ReadersSimple.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_ReadersXml.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_ReadersXtal.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_ShapeBio.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_ShapeSpecial.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_ShapeSurface.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_Smiles.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_Symmetry.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_ar.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_bs.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_ca.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_cs.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_da.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_de.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_el.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_en_GB.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_es.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_et.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_fi.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_fr.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_fy.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_hu.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_hy.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_id.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_it.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_jv.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_ko.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_ms.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_nb.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_nl.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_oc.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_pl.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_pt.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_pt_BR.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_ru.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_sl.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_sv.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_ta.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_te.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_tr.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_uk.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_zh_CN.jar
+- share/views/public/plugins/jmol/JmolAppletSigned0_i18n_zh_TW.jar
+- share/views/public/plugins/jmol/JmolData.jar
+- share/views/public/plugins/jmol/LEAME.txt
+- share/views/public/plugins/jmol/LICENSE.txt
+- share/views/public/plugins/jmol/README.txt
+- share/views/public/plugins/jmol/jmol
+- share/views/public/plugins/jmol/jmol.bat
+- share/views/public/plugins/jmol/jmol.mac
+- share/views/public/plugins/jmol/jmol.sh
 - share/views/public/plugins/jqgrid/css/ellipsis-xbl.xml
 - share/views/public/plugins/jqgrid/css/ui.jqgrid.css
 - share/views/public/plugins/jqgrid/js/Changes.txt
@@ -654,10 +787,10 @@ files:
 - share/views/public/plugins/jquery-ui/js/jquery-1.5.1.min.js
 - share/views/public/plugins/jquery-ui/js/jquery-ui-1.8.14.custom.min.js
 - share/views/public/plugins/jquery/js/jquery-1.6.2.min.js
+- share/views/public/plugins/jquery/js/jquery.form.js
 - share/views/result.haml
 - share/views/task_list.haml
 - share/views/wait.haml
-- share/views/workflow_list.haml
 - LICENSE
 - test/test_helper.rb
 - test/rbbt/workflow/rest/test_client.rb

data/share/views/workflow_list.haml

@@ -1,5 +0,0 @@
--# %ul
--#   - workflows.each do |workflow|
--#     %li
--#       %a(href="#{workflow.to_s}")= workflow.to_s
-Select one workflow on the left