rbbt-marq 1.0.0

data/install_scripts/GEO/series/GSE12061.yaml

@@ -0,0 +1,13 @@
+--- 
+:description: The Snf1 kinase plays a critical role in recalibrating cellular metabolism in response to glucose depletion. Hundreds of genes show changes in expression levels when the SNF1 gene is deleted. However, cells can adapt to the absence of a specific gene when grown in long term culture. Here we apply a chemical genetic method to rapidly and selectively inactivate a modified Snf1 kinase using a pyrazolopyrimidine inhibitor. By allowing cells to adjust to a change in carbon source prior to inhibition of the Snf1 kinase activity, we identified a set of genes whose expression increased when Snf1 was inhibited. Prominent in this set are genes that are activated by Gcn4, a transcriptional activator of amino acid biosynthetic genes. Deletion of Snf1 increased Gcn4 protein levels without affecting its mRNA levels. The increased Gcn4 protein levels required the Gcn2 kinase and Gcn20, regulators of GCN4 translation. These data indicate that Snf1 functions upstream of Gcn20 to regulate control of GCN4 translation.
+:arrays: 
+  GSM304531: 
+    condition: Snf1-I132G 2NMPP1_Raffinose
+  GSM304520: 
+    condition: Snf1-I132G 2NMPP1_Raffinose
+  GSM304532: 
+    condition: Snf1 2NMPP1_Raffinose
+  GSM304521: 
+    condition: Snf1 2NMPP1_Raffinose
+:title: Chemical genomics study of Snf1 as a gene repressor
+:platform: GPL90

data/install_scripts/GEO/series/GSE12104.yaml

@@ -0,0 +1,10 @@
+--- 
+:description: "GSM306248: S. cerevisiae was grown on YEPD. Wild type and msg5 yeast cells were grown overnight at 24 \xC2\xB0C to an optical density 0.8 - 1 (A600). The culture was refreshed to 0.2 O.D and grown at 24 \xC2\xB0C for 4hours. After  4 hours of growth cells were collected, frozen at -80 \xC2\xB0C and processed for RNA extraction.\n\
+  GSM306249: msg5 yeast cells were grown overnight at 24 \xC2\xB0C to an optical density 0.8 - 1 (A600). The culture was refreshed to 0.2 O.D and grown at 24 \xC2\xB0C for 4hours. After 4 hours the culture was divided into two parts. One was treated with alpha factor and the other part was allow to grow without any treatment. After 90 minutes of treatment, both cultures of cells were collected, frozen at -80 \xC2\xB0C and processed for RNA extraction."
+:arrays: 
+  GSM306248: 
+    condition: msg5-wt
+  GSM306249: 
+    condition: msg5 f.alpha
+:title: Transcriptional profiles of msg5 mutants and msg5 mutants in the presence/absence of alpha factor
+:platform: GPL7054

data/install_scripts/GEO/series/GSE12138.yaml

@@ -0,0 +1,13 @@
+--- 
+:description: "Yeast Mrc1, ortholog of metazoan Claspin, is both a central component of normal DNA replication forks and a mediator of the S phase checkpoint.  We report that Mrc1 interacts with Pol2, the catalytic subunit of DNA polymerase \xCE\xB5, essential for leading strand DNA replication and for the checkpoint.  In unperturbed cells, Mrc1 interacts independently with both the N-terminal and C-terminal halves of Pol2 (Pol2N and Pol2C).  Strikingly, phosphorylation of Mrc1 during the S phase checkpoint abolishes Pol2N binding but not Pol2C interaction.  Mrc1 is required to stabilize Pol2 at replication forks stalled in HU.  The bimodal Mrc1/Pol2 interaction may identify a novel step in regulating the S phase checkpoint response to DNA damage on the leading strand.  We propose that Mrc1, which also interacts with the MCMs,  may modulate coupling of polymerization and unwinding at the replication fork."
+:arrays: 
+  GSM305880: 
+    condition: DNAPol2-mrc1
+  GSM305879: 
+    condition: DNAPol2-HU
+  GSM305881: 
+    condition: DNAPol2-tof1
+  GSM305882: 
+    condition: WCE-HU
+:title: "Mrc1 and DNA polymerase \xCE\xB5 function together in linking DNA replication and the S phase checkpoint"
+:platform: GPL347

data/install_scripts/GEO/series/GSE12150.yaml

@@ -0,0 +1,32 @@
+--- 
+:title: Expression data from yeast with Anc1p or without under basal or MMS exposed conditions
+:description: |-
+  We are investigating the transcriptional response of Anc1 deficient yeast under basal and MMS exposed conditions
+  We used microarrays to detail the global programme of gene expression underlying the MMS response in WT and Anc1 deficient yeast
+  Keywords: dose
+:arrays: 
+  GSM306027: 
+    treatment: anc1.treat
+  GSM306028: 
+    treatment: anc1.untreat
+  GSM306029: 
+    treatment: anc1.treat
+  GSM306018: 
+    treatment: wt.untreat
+  GSM306020: 
+    treatment: wt.untreat
+  GSM306019: 
+    treatment: wt.treat
+  GSM306021: 
+    treatment: wt.treat
+  GSM306022: 
+    treatment: wt.untreat
+  GSM306023: 
+    treatment: wt.treat
+  GSM306024: 
+    treatment: anc1.untreat
+  GSM306025: 
+    treatment: anc1.treat
+  GSM306026: 
+    treatment: anc1.untreat
+:platform: GPL90

data/install_scripts/GEO/series/GSE12684.yaml

@@ -0,0 +1,47 @@
+--- 
+:title: hog1, slt2, rlm1, and msn2/4 mutants exposed to zymolyase
+:description: |-
+  This SuperSeries is composed of the following subset Series:
+  GSE9930: Wild type 3 hour exposure to zymolyase
+  GSE9931: hog1 mutant 3 hour exposure to zymolyase
+  GSE9932: slt2 mutant 3 hour exposure to zymolyase
+  GSE9933: rlm1 mutant 3 hour exposure to zymolyase
+  GSE9934: msn2/4 mutant 3 hour exposure to zymolyase
+:arrays: 
+  GSM249126: 
+    treatment: rlm1 3h zym
+  GSM249104: 
+    treatment: slt2 3h zym
+  GSM248994: 
+    treatment: wt 3h zym
+  GSM249127: 
+    treatment: msn2/4 3h zym
+  GSM249105: 
+    treatment: rlm1 3h zym
+  GSM248995: 
+    treatment: wt 3h zym
+  GSM249128: 
+    treatment: msn2/4 3h zym
+  GSM249106: 
+    treatment: rlm1 3h zym
+  GSM249086: 
+    treatment: hog1 3h zym
+  GSM249020: 
+    treatment: wt 3h zym
+  GSM249098: 
+    treatment: hog1 3h zym
+  GSM249099: 
+    treatment: slt2 3h zym
+  GSM249088: 
+    treatment: hog1 3h zym
+  GSM249101: 
+    treatment: slt2 3h zym
+  GSM249091: 
+    treatment: hog1 3h zym
+  GSM249125: 
+    treatment: rlm1 3h zym
+  GSM249103: 
+    treatment: slt2 3h zym
+  GSM248993: 
+    treatment: wt 3h zym
+:platform: GPL7054

data/install_scripts/GEO/series/GSE12685.yaml

@@ -0,0 +1,34 @@
+--- 
+:arrays: 
+  GSM318317: 
+    disease: incipient Alzheimer
+  GSM318320: 
+    disease: incipient Alzheimer
+  GSM318442: 
+    disease: incipient Alzheimer
+  GSM318321: 
+    disease: incipient Alzheimer
+  GSM318310: 
+    disease: control
+  GSM318211: 
+    disease: control
+  GSM318443: 
+    disease: incipient Alzheimer
+  GSM318311: 
+    disease: control
+  GSM318212: 
+    disease: control
+  GSM318312: 
+    disease: control
+  GSM318213: 
+    disease: control
+  GSM318445: 
+    disease: incipient Alzheimer
+  GSM318313: 
+    disease: control
+  GSM318314: 
+    disease: control
+:description: "In Alzheimer\xE2\x80\x99s disease (AD), early deficits in learning and memory are a consequence of synaptic modification which are likely induced by toxic beta-amyloid oligomers (oA\xCE\xB2).  To identify molecular targets downstream of oA\xCE\xB2 binding  we prepared synaptoneurosomes from frontal cortex of control and IAD patients, and isolated mRNAs for comparison of gene expression.  This approach elevated synaptic mRNAs above the threshold necessary for expression changes to be discriminated and also reduced other cellular mRNAs.  In patients with minimal cognitive impairment (MCI) termed incipient AD (IAD) global measures of cognition declined with increasing levels of dimeric A\xCE\xB2 (dA\xCE\xB2).  These patients also showed increased expression of neuroplasticity related genes, many encoding 3' UTR  consensus sequences that regulate local translation in the synapse.  One such gene, GluR2, displayed elevated mRNA and protein expression in IAD.  Other neurotransmitter-related genes were also upregulated.  Overexpressed genes may induce compensatory as well as negative effects on cognition and provide targets for intervention to moderate the response to dA\xCE\xB2.\n\
+  !Series_overall_design = Patient information"
+:title: Expression of mRNAs Regulating Synaptic Function and Neuroplasticity in Incipient AD
+:platform: GPL96

data/install_scripts/GEO/series/GSE1365.yaml

@@ -0,0 +1,14 @@
+--- 
+:title: TFB5 (YDR079c-a) Knockout Study
+:arrays: 
+  GSM22072: 
+    condition: tfb5/wt
+  GSM22073: 
+    condition: tfb5/wt
+  GSM22074: 
+    condition: wt/wt
+:description: |-
+  RNA expression analysis of polyA+ RNA isolated from a TFB5 (YDR079c-a) deletion strain and an isogenic wild type strain.
+  Comparison of RNA expression levels in TFB5 deletion strain compared to a wild type strain at 30C in YPD medium
+  Keywords: repeat sample
+:platform: GPL1214

data/install_scripts/GEO/series/GSE1404.yaml

@@ -0,0 +1,596 @@
+--- 
+:title: Exploration of essential gene functions via titratable promoter alleles
+:description: |-
+  Exploration of essential gene functions via titratable promoter alleles.
+  Collection of microarray experiments described in Mnaimneh et al. 2004.
+  Keywords = Yeast
+  Keywords = Saccharomyces cerevisiae
+  Keywords = oligonucleotide
+  Keywords = dual channel
+  Keywords: other
+:arrays: 
+  GSM23004: 
+    mutant: YOR110W TET_mutant
+  GSM23030: 
+    mutant: YGL047W TET_mutant
+  GSM22788: 
+    mutant: YBR243C TET_mutant
+  GSM22869: 
+    mutant: YLR060W TET_mutant
+  GSM22895: 
+    mutant: YLR106C TET_mutant
+  GSM22976: 
+    mutant: YIR022W TET_mutant
+  GSM23031: 
+    mutant: YGL047W TET_mutant
+  GSM23005: 
+    mutant: YPL063W TET_mutant
+  GSM22789: 
+    mutant: YPR180W TET_mutant
+  GSM22896: 
+    mutant: YLR106C TET_mutant
+  GSM22977: 
+    mutant: YMR079W TET_mutant
+  GSM23032: 
+    mutant: YGL245W TET_mutant
+  GSM23006: 
+    mutant: YNL131W TET_mutant
+  GSM22897: 
+    mutant: YBR193C TET_mutant
+  GSM22978: 
+    mutant: YNL272C TET_mutant
+  GSM23033: 
+    mutant: YGR094W TET_mutant
+  GSM23007: 
+    mutant: YHR070W TET_mutant
+  GSM22898: 
+    mutant: YOR232W TET_mutant
+  GSM22979: 
+    mutant: YFL005W TET_mutant
+  GSM23060: 
+    mutant: YLR076C TET_mutant
+  GSM23034: 
+    mutant: YGR173W TET_mutant
+  GSM22899: 
+    mutant: YIL106W TET_mutant
+  GSM23008: 
+    mutant: YCR042C TET_mutant
+  GSM23061: 
+    mutant: YLR101C TET_mutant
+  GSM23035: 
+    mutant: YGR198W TET_mutant
+  GSM23009: 
+    mutant: YDL060W TET_mutant
+  GSM23062: 
+    mutant: YLR145W TET_mutant
+  GSM23036: 
+    mutant: YGR198W TET_mutant
+  GSM23063: 
+    mutant: YLR243W TET_mutant
+  GSM23037: 
+    mutant: YGR198W TET_mutant
+  GSM22900: 
+    mutant: YJR002W TET_mutant
+  GSM23090: 
+    mutant: YOR145C TET_mutant
+  GSM23064: 
+    mutant: YLR310C TET_mutant
+  GSM23038: 
+    mutant: YGR251W TET_mutant
+  GSM22820: 
+    mutant: YDL031W TET_mutant
+  GSM22901: 
+    mutant: YAL034W-A TET_mutant
+  GSM23091: 
+    mutant: YOR146W TET_mutant
+  GSM23065: 
+    mutant: YLR359W TET_mutant
+  GSM23039: 
+    mutant: YGR251W TET_mutant
+  GSM22821: 
+    mutant: YDL031W TET_mutant
+  GSM22902: 
+    mutant: YNR043W TET_mutant
+  GSM23092: 
+    mutant: YOR169C TET_mutant
+  GSM23066: 
+    mutant: YLR424W TET_mutant
+  GSM22822: 
+    mutant: YOR204W TET_mutant
+  GSM22903: 
+    mutant: YHR023W TET_mutant
+  GSM23093: 
+    mutant: YOR206W TET_mutant
+  GSM23067: 
+    mutant: YLR440C TET_mutant
+  GSM22823: 
+    mutant: YOR236W TET_mutant
+  GSM22904: 
+    mutant: YGL122C TET_mutant
+  GSM22930: 
+    mutant: YAL033W TET_mutant
+  GSM23094: 
+    mutant: YOR259C TET_mutant
+  GSM23068: 
+    mutant: YLR440C TET_mutant
+  GSM22824: 
+    mutant: YDR141C TET_mutant
+  GSM22905: 
+    mutant: YGL122C TET_mutant
+  GSM22931: 
+    mutant: YER023W TET_mutant
+  GSM23095: 
+    mutant: YPR169W TET_mutant
+  GSM23069: 
+    mutant: YHR090C TET_mutant
+  GSM22825: 
+    mutant: YDR141C TET_mutant
+  GSM22906: 
+    mutant: YGL122C TET_mutant
+  GSM22932: 
+    mutant: YKR086W TET_mutant
+  GSM23096: 
+    mutant: YGR103W TET_mutant
+  GSM22826: 
+    mutant: YIL003W TET_mutant
+  GSM22907: 
+    mutant: YPL190C TET_mutant
+  GSM22933: 
+    mutant: YPR178W TET_mutant
+  GSM23097: 
+    mutant: YFR037C TET_mutant
+  GSM22827: 
+    mutant: YNL258C TET_mutant
+  GSM22934: 
+    mutant: YDL055C TET_mutant
+  GSM22960: 
+    mutant: YKL082C TET_mutant
+  GSM23098: 
+    mutant: YER006W TET_mutant
+  GSM22828: 
+    mutant: YNL258C TET_mutant
+  GSM22880: 
+    mutant: YOL133W TET_mutant
+  GSM22908: 
+    mutant: YNL124W TET_mutant
+  GSM22935: 
+    mutant: YJL072C TET_mutant
+  GSM22961: 
+    mutant: YGR095C TET_mutant
+  GSM23099: 
+    mutant: YGR198W TET_mutant
+  GSM22881: 
+    mutant: YGL073W TET_mutant
+  GSM22909: 
+    mutant: YPL126W TET_mutant
+  GSM22936: 
+    mutant: YAL043C TET_mutant
+  GSM22962: 
+    mutant: YOR294W TET_mutant
+  GSM22829: 
+    mutant: YMR128W TET_mutant
+  GSM22882: 
+    mutant: YGL073W TET_mutant
+  GSM22937: 
+    mutant: YLR196W TET_mutant
+  GSM22963: 
+    mutant: YFR037C TET_mutant
+  GSM22883: 
+    mutant: YGL073W TET_mutant
+  GSM22938: 
+    mutant: YPR186C TET_mutant
+  GSM22964: 
+    mutant: YBL020W TET_mutant
+  GSM22990: 
+    mutant: YLR147C TET_mutant
+  GSM22884: 
+    mutant: YPR033C TET_mutant
+  GSM22939: 
+    mutant: YBR049C TET_mutant
+  GSM22965: 
+    mutant: YFR037C TET_mutant
+  GSM22991: 
+    mutant: YDR201W TET_mutant
+  GSM22966: 
+    mutant: YOR077W TET_mutant
+  GSM22992: 
+    mutant: YDR201W TET_mutant
+  GSM23020: 
+    mutant: YBR190W TET_mutant
+  GSM22885: 
+    mutant: YHR085W TET_mutant
+  GSM22967: 
+    mutant: YOR077W TET_mutant
+  GSM22993: 
+    mutant: YKR037C TET_mutant
+  GSM23021: 
+    mutant: YCR013C TET_mutant
+  GSM22886: 
+    mutant: YHR085W TET_mutant
+  GSM22968: 
+    mutant: YOR077W TET_mutant
+  GSM22994: 
+    mutant: YDR464W TET_mutant
+  GSM23022: 
+    mutant: YDL196W TET_mutant
+  GSM22887: 
+    mutant: YHR197W TET_mutant
+  GSM23104: 
+    mutant: TAP-YGL245W
+  GSM22969: 
+    mutant: YOR077W TET_mutant
+  GSM22995: 
+    mutant: YIR012W TET_mutant
+  GSM23023: 
+    mutant: YDR327W TET_mutant
+  GSM22888: 
+    mutant: YDR062W TET_mutant
+  GSM23050: 
+    mutant: YKL033W TET_mutant
+  GSM22996: 
+    mutant: YPL243W TET_mutant
+  GSM23024: 
+    mutant: YDR365C TET_mutant
+  GSM22889: 
+    mutant: YER112W TET_mutant
+  GSM23051: 
+    mutant: YKL033W TET_mutant
+  GSM22997: 
+    mutant: YLR005W TET_mutant
+  GSM23025: 
+    mutant: YDR365C TET_mutant
+  GSM23052: 
+    mutant: YKL052C TET_mutant
+  GSM22998: 
+    mutant: YLR005W TET_mutant
+  GSM23026: 
+    mutant: YDR412W TET_mutant
+  GSM23053: 
+    mutant: YKL180W TET_mutant
+  GSM23027: 
+    mutant: YDR412W TET_mutant
+  GSM22999: 
+    mutant: YNL222W TET_mutant
+  GSM23080: 
+    mutant: YNL313C TET_mutant
+  GSM23054: 
+    mutant: YKR079C TET_mutant
+  GSM23028: 
+    mutant: YDR527W TET_mutant
+  GSM22810: 
+    mutant: YJL194W TET_mutant
+  GSM23081: 
+    mutant: YNL313C TET_mutant
+  GSM23055: 
+    mutant: YLJ097W TET_mutant
+  GSM23029: 
+    mutant: YDR527W TET_mutant
+  GSM22811: 
+    mutant: YLR459W TET_mutant
+  GSM23082: 
+    mutant: YNR054C TET_mutant
+  GSM23056: 
+    mutant: YLL034C TET_mutant
+  GSM22812: 
+    mutant: YBR029C TET_mutant
+  GSM23083: 
+    mutant: YNR054C TET_mutant
+  GSM23057: 
+    mutant: YLL034C TET_mutant
+  GSM22813: 
+    mutant: YBR029C TET_mutant
+  GSM22920: 
+    mutant: YER006W TET_mutant
+  GSM23084: 
+    mutant: YOL022C TET_mutant
+  GSM23058: 
+    mutant: YLR008C TET_mutant
+  GSM22814: 
+    mutant: YMR213W TET_mutant
+  GSM22921: 
+    mutant: YJL039C TET_mutant
+  GSM23085: 
+    mutant: YOL026C TET_mutant
+  GSM23059: 
+    mutant: YLR008C TET_mutant
+  GSM22815: 
+    mutant: YPL228W TET_mutant
+  GSM22922: 
+    mutant: YJL061W TET_mutant
+  GSM23086: 
+    mutant: YOL026C TET_mutant
+  GSM22816: 
+    mutant: YPR105C TET_mutant
+  GSM22923: 
+    mutant: YHR118C TET_mutant
+  GSM23087: 
+    mutant: YOR004W TET_mutant
+  GSM22762: 
+    mutant: YMR001C TET_mutant
+  GSM22817: 
+    mutant: YGR278W TET_mutant
+  GSM22924: 
+    mutant: YMR076C TET_mutant
+  GSM22950: 
+    mutant: YMR239C TET_mutant
+  GSM23088: 
+    mutant: YOR004W TET_mutant
+  GSM22818: 
+    mutant: YNL245C TET_mutant
+  GSM22870: 
+    mutant: YLR291C TET_mutant
+  GSM22925: 
+    mutant: YBR196C TET_mutant
+  GSM22951: 
+    mutant: YMR200W TET_mutant
+  GSM23089: 
+    mutant: YOR060C TET_mutant
+  GSM22790: 
+    mutant: YNR035C TET_mutant
+  GSM22819: 
+    mutant: YNL245C TET_mutant
+  GSM22871: 
+    mutant: YPL075W TET_mutant
+  GSM22926: 
+    mutant: YOR281C TET_mutant
+  GSM22952: 
+    mutant: YOL005C TET_mutant
+  GSM22791: 
+    mutant: YBR234C TET_mutant
+  GSM22872: 
+    mutant: YPL075W TET_mutant
+  GSM22927: 
+    mutant: YBR088C TET_mutant
+  GSM22953: 
+    mutant: YOL005C TET_mutant
+  GSM22792: 
+    mutant: YJL081C TET_mutant
+  GSM22873: 
+    mutant: YDL207W TET_mutant
+  GSM22928: 
+    mutant: YEL055C TET_mutant
+  GSM22954: 
+    mutant: YJL011C TET_mutant
+  GSM22980: 
+    mutant: YLR378C TET_mutant
+  GSM22793: 
+    mutant: YER172C TET_mutant
+  GSM22874: 
+    mutant: YOR168W TET_mutant
+  GSM22929: 
+    mutant: YNL221C TET_mutant
+  GSM22955: 
+    mutant: YOL038W TET_mutant
+  GSM22981: 
+    mutant: YLL003W TET_mutant
+  GSM22794: 
+    mutant: YHR040W TET_mutant
+  GSM22875: 
+    mutant: YHR188C TET_mutant
+  GSM22956: 
+    mutant: YOR261C TET_mutant
+  GSM22982: 
+    mutant: YLR336C TET_mutant
+  GSM23010: 
+    mutant: YKL210W TET_mutant
+  GSM22795: 
+    mutant: YER172C TET_mutant
+  GSM22876: 
+    mutant: YPL076W TET_mutant
+  GSM22957: 
+    mutant: YDL007W TET_mutant
+  GSM22983: 
+    mutant: YDL047W TET_mutant
+  GSM23011: 
+    mutant: YKL210W TET_mutant
+  GSM22796: 
+    mutant: YOL077C TET_mutant
+  GSM22877: 
+    mutant: YLL035W TET_mutant
+  GSM22958: 
+    mutant: YKL125W TET_mutant
+  GSM22984: 
+    mutant: YKL108W TET_mutant
+  GSM23012: 
+    mutant: YKL210W TET_mutant
+  GSM22797: 
+    mutant: YJR076C TET_mutant
+  GSM22878: 
+    mutant: YMR290C TET_mutant
+  GSM22959: 
+    mutant: YKL082C TET_mutant
+  GSM22985: 
+    mutant: YDR489W TET_mutant
+  GSM23013: 
+    mutant: YDL064W TET_mutant
+  GSM23040: 
+    mutant: YGR280C TET_mutant
+  GSM22798: 
+    mutant: YAL038W TET_mutant
+  GSM22879: 
+    mutant: YDR047W TET_mutant
+  GSM22986: 
+    mutant: YIL147C TET_mutant
+  GSM23014: 
+    mutant: YGR048W TET_mutant
+  GSM23041: 
+    mutant: YHR122W TET_mutant
+  GSM22799: 
+    mutant: YGL116W TET_mutant
+  GSM22987: 
+    mutant: YLR086W TET_mutant
+  GSM23015: 
+    mutant: YBL004W TET_mutant
+  GSM23042: 
+    mutant: YHR122W TET_mutant
+  GSM22988: 
+    mutant: YLR275W TET_mutant
+  GSM23016: 
+    mutant: YGR090W TET_mutant
+  GSM23043: 
+    mutant: YHR122W TET_mutant
+  GSM22989: 
+    mutant: YLR147C TET_mutant
+  GSM23017: 
+    mutant: YGR090W TET_mutant
+  GSM23070: 
+    mutant: YNL149C TET_mutant
+  GSM23044: 
+    mutant: YGR172C TET_mutant
+  GSM23018: 
+    mutant: YGR090W TET_mutant
+  GSM22800: 
+    mutant: YBL084C TET_mutant
+  GSM23071: 
+    mutant: YNL149C TET_mutant
+  GSM23045: 
+    mutant: YJL009W TET_mutant
+  GSM23019: 
+    mutant: YBR190W TET_mutant
+  GSM22801: 
+    mutant: YDR054C TET_mutant
+  GSM23072: 
+    mutant: YNL150W TET_mutant
+  GSM23046: 
+    mutant: YJL091C TET_mutant
+  GSM22802: 
+    mutant: YDR054C TET_mutant
+  GSM23073: 
+    mutant: YNL158W TET_mutant
+  GSM23047: 
+    mutant: YJL097W TET_mutant
+  GSM22910: 
+    mutant: YLR457C TET_mutant
+  GSM22803: 
+    mutant: YDR168W TET_mutant
+  GSM23074: 
+    mutant: YNL158W TET_mutant
+  GSM23048: 
+    mutant: YJR041C TET_mutant
+  GSM22911: 
+    mutant: YML031W TET_mutant
+  GSM22804: 
+    mutant: YLR229C TET_mutant
+  GSM22830: 
+    mutant: YAL003W TET_mutant
+  GSM23075: 
+    mutant: YNL182C TET_mutant
+  GSM23049: 
+    mutant: YJR041C TET_mutant
+  GSM22805: 
+    mutant: YLR229C TET_mutant
+  GSM22831: 
+    mutant: YGR060W TET_mutant
+  GSM22912: 
+    mutant: YOR372C TET_mutant
+  GSM23076: 
+    mutant: YNL247W TET_mutant
+  GSM22806: 
+    mutant: YGL155W TET_mutant
+  GSM22832: 
+    mutant: YFL024C TET_mutant
+  GSM22913: 
+    mutant: YCL017C TET_mutant
+  GSM23077: 
+    mutant: YNL310C TET_mutant
+  GSM22807: 
+    mutant: YGL155W TET_mutant
+  GSM22833: 
+    mutant: YBL040C TET_mutant
+  GSM22914: 
+    mutant: YPR144C TET_mutant
+  GSM22940: 
+    mutant: YBR002C TET_mutant
+  GSM23078: 
+    mutant: YNL313C TET_mutant
+  GSM22808: 
+    mutant: YPR019W TET_mutant
+  GSM22834: 
+    mutant: YGR175C TET_mutant
+  GSM22915: 
+    mutant: YPL093W TET_mutant
+  GSM22941: 
+    mutant: YPL010W TET_mutant
+  GSM23079: 
+    mutant: YNL313C TET_mutant
+  GSM22835: 
+    mutant: YGR060W TET_mutant
+  GSM22916: 
+    mutant: YNR053C TET_mutant
+  GSM22942: 
+    mutant: YBR192W TET_mutant
+  GSM22781: 
+    mutant: YDL132W TET_mutant
+  GSM22809: 
+    mutant: YPR019W TET_mutant
+  GSM22836: 
+    mutant: YML130C TET_mutant
+  GSM22917: 
+    mutant: YGR103W TET_mutant
+  GSM22943: 
+    mutant: YOR119C TET_mutant
+  GSM22782: 
+    mutant: YML046W TET_mutant
+  GSM22837: 
+    mutant: YPL231W TET_mutant
+  GSM22918: 
+    mutant: YLR007W TET_mutant
+  GSM22944: 
+    mutant: YOR095C TET_mutant
+  GSM22970: 
+    mutant: YOR077W TET_mutant
+  GSM22783: 
+    mutant: YGR198W TET_mutant
+  GSM22890: 
+    mutant: YER112W TET_mutant
+  GSM22945: 
+    mutant: YDR091C TET_mutant
+  GSM22971: 
+    mutant: YHR205W TET_mutant
+  GSM23000: 
+    mutant: YNL222W TET_mutant
+  GSM22784: 
+    mutant: YBL020W TET_mutant
+  GSM22891: 
+    mutant: YDL087C TET_mutant
+  GSM22919: 
+    mutant: YER006W TET_mutant
+  GSM22946: 
+    mutant: YMR235C TET_mutant
+  GSM22972: 
+    mutant: YHR205W TET_mutant
+  GSM23001: 
+    mutant: YJR007W TET_mutant
+  GSM22785: 
+    mutant: YGL048C TET_mutant
+  GSM22892: 
+    mutant: YBR142W TET_mutant
+  GSM22947: 
+    mutant: YMR235C TET_mutant
+  GSM22973: 
+    mutant: YHR205W TET_mutant
+  GSM23002: 
+    mutant: YBR143C TET_mutant
+  GSM22786: 
+    mutant: YOR262W TET_mutant
+  GSM22867: 
+    mutant: YDR373W TET_mutant
+  GSM22893: 
+    mutant: YLR163C TET_mutant
+  GSM22948: 
+    mutant: YMR239C TET_mutant
+  GSM22974: 
+    mutant: YGR245C TET_mutant
+  GSM23003: 
+    mutant: YKL018W TET_mutant
+  GSM22787: 
+    mutant: YOR335C TET_mutant
+  GSM22868: 
+    mutant: YDR373W TET_mutant
+  GSM22894: 
+    mutant: YMR043W TET_mutant
+  GSM22949: 
+    mutant: YMR239C TET_mutant
+  GSM22975: 
+    mutant: YGR245C TET_mutant
+:platform: GPL1229