rb-gsl 1.15.3.1

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  1. checksums.yaml +7 -0
  2. data/AUTHORS +6 -0
  3. data/COPYING +339 -0
  4. data/ChangeLog +567 -0
  5. data/README +32 -0
  6. data/Rakefile +99 -0
  7. data/THANKS +17 -0
  8. data/VERSION +1 -0
  9. data/examples/alf/alf.gp +15 -0
  10. data/examples/alf/alf.rb +32 -0
  11. data/examples/blas/blas.rb +13 -0
  12. data/examples/blas/dnrm2.rb +16 -0
  13. data/examples/blas/level1.rb +81 -0
  14. data/examples/blas/level2.rb +11 -0
  15. data/examples/blas/level3.rb +12 -0
  16. data/examples/bspline.rb +57 -0
  17. data/examples/cdf.rb +16 -0
  18. data/examples/cheb.rb +21 -0
  19. data/examples/combination.rb +23 -0
  20. data/examples/complex/RC-lpf.rb +47 -0
  21. data/examples/complex/add.rb +36 -0
  22. data/examples/complex/coerce.rb +14 -0
  23. data/examples/complex/complex.rb +25 -0
  24. data/examples/complex/fpmi.rb +70 -0
  25. data/examples/complex/functions.rb +77 -0
  26. data/examples/complex/michelson.rb +36 -0
  27. data/examples/complex/mul.rb +28 -0
  28. data/examples/complex/oscillator.rb +17 -0
  29. data/examples/complex/set.rb +37 -0
  30. data/examples/const/physconst.rb +151 -0
  31. data/examples/const/travel.rb +45 -0
  32. data/examples/deriv/demo.rb +13 -0
  33. data/examples/deriv/deriv.rb +36 -0
  34. data/examples/deriv/diff.rb +35 -0
  35. data/examples/dht.rb +42 -0
  36. data/examples/dirac.rb +56 -0
  37. data/examples/eigen/eigen.rb +34 -0
  38. data/examples/eigen/herm.rb +22 -0
  39. data/examples/eigen/narray.rb +9 -0
  40. data/examples/eigen/nonsymm.rb +37 -0
  41. data/examples/eigen/nonsymmv.rb +43 -0
  42. data/examples/eigen/qhoscillator.gp +35 -0
  43. data/examples/eigen/qhoscillator.rb +90 -0
  44. data/examples/eigen/vander.rb +41 -0
  45. data/examples/fft/fft.rb +17 -0
  46. data/examples/fft/fft2.rb +17 -0
  47. data/examples/fft/forward.rb +25 -0
  48. data/examples/fft/forward2.rb +26 -0
  49. data/examples/fft/radix2.rb +18 -0
  50. data/examples/fft/real-halfcomplex.rb +33 -0
  51. data/examples/fft/real-halfcomplex2.rb +30 -0
  52. data/examples/fft/realradix2.rb +19 -0
  53. data/examples/fft/sunspot.dat +256 -0
  54. data/examples/fft/sunspot.rb +16 -0
  55. data/examples/fit/expdata.dat +20 -0
  56. data/examples/fit/expfit.rb +31 -0
  57. data/examples/fit/gaussfit.rb +29 -0
  58. data/examples/fit/gaussian_2peaks.rb +34 -0
  59. data/examples/fit/hillfit.rb +40 -0
  60. data/examples/fit/lognormal.rb +26 -0
  61. data/examples/fit/lorentzfit.rb +22 -0
  62. data/examples/fit/multifit.rb +72 -0
  63. data/examples/fit/ndlinear.rb +133 -0
  64. data/examples/fit/nonlinearfit.rb +89 -0
  65. data/examples/fit/plot.gp +36 -0
  66. data/examples/fit/polyfit.rb +9 -0
  67. data/examples/fit/powerfit.rb +21 -0
  68. data/examples/fit/sigmoidfit.rb +40 -0
  69. data/examples/fit/sinfit.rb +22 -0
  70. data/examples/fit/wlinear.rb +46 -0
  71. data/examples/fresnel.rb +11 -0
  72. data/examples/function/function.rb +36 -0
  73. data/examples/function/log.rb +7 -0
  74. data/examples/function/min.rb +33 -0
  75. data/examples/function/sin.rb +10 -0
  76. data/examples/function/synchrotron.rb +18 -0
  77. data/examples/gallery/butterfly.rb +7 -0
  78. data/examples/gallery/cayley.rb +12 -0
  79. data/examples/gallery/cornu.rb +23 -0
  80. data/examples/gallery/eight.rb +11 -0
  81. data/examples/gallery/koch.rb +40 -0
  82. data/examples/gallery/lemniscate.rb +11 -0
  83. data/examples/gallery/polar.rb +11 -0
  84. data/examples/gallery/rgplot/cossin.rb +35 -0
  85. data/examples/gallery/rgplot/rgplot.replaced +0 -0
  86. data/examples/gallery/rgplot/roesller.rb +55 -0
  87. data/examples/gallery/roesller.rb +39 -0
  88. data/examples/gallery/scarabaeus.rb +14 -0
  89. data/examples/histogram/cauchy.rb +27 -0
  90. data/examples/histogram/cauchy.sh +2 -0
  91. data/examples/histogram/exponential.rb +19 -0
  92. data/examples/histogram/gauss.rb +16 -0
  93. data/examples/histogram/gsl-histogram.rb +40 -0
  94. data/examples/histogram/histo2d.rb +31 -0
  95. data/examples/histogram/histo3d.rb +34 -0
  96. data/examples/histogram/histogram-pdf.rb +27 -0
  97. data/examples/histogram/histogram.rb +26 -0
  98. data/examples/histogram/integral.rb +28 -0
  99. data/examples/histogram/poisson.rb +27 -0
  100. data/examples/histogram/power.rb +25 -0
  101. data/examples/histogram/rebin.rb +17 -0
  102. data/examples/histogram/smp.dat +5 -0
  103. data/examples/histogram/xexp.rb +21 -0
  104. data/examples/integration/ahmed.rb +21 -0
  105. data/examples/integration/cosmology.rb +75 -0
  106. data/examples/integration/friedmann.gp +16 -0
  107. data/examples/integration/friedmann.rb +35 -0
  108. data/examples/integration/gamma-zeta.rb +35 -0
  109. data/examples/integration/integration.rb +22 -0
  110. data/examples/integration/qag.rb +8 -0
  111. data/examples/integration/qag2.rb +14 -0
  112. data/examples/integration/qag3.rb +8 -0
  113. data/examples/integration/qagi.rb +28 -0
  114. data/examples/integration/qagi2.rb +49 -0
  115. data/examples/integration/qagiu.rb +29 -0
  116. data/examples/integration/qagp.rb +20 -0
  117. data/examples/integration/qags.rb +14 -0
  118. data/examples/integration/qawc.rb +18 -0
  119. data/examples/integration/qawf.rb +41 -0
  120. data/examples/integration/qawo.rb +29 -0
  121. data/examples/integration/qaws.rb +30 -0
  122. data/examples/integration/qng.rb +17 -0
  123. data/examples/interp/demo.gp +20 -0
  124. data/examples/interp/demo.rb +45 -0
  125. data/examples/interp/interp.rb +37 -0
  126. data/examples/interp/points +10 -0
  127. data/examples/interp/spline.rb +20 -0
  128. data/examples/jacobi/deriv.rb +40 -0
  129. data/examples/jacobi/integrate.rb +34 -0
  130. data/examples/jacobi/interp.rb +43 -0
  131. data/examples/jacobi/jacobi.rb +11 -0
  132. data/examples/linalg/HH.rb +15 -0
  133. data/examples/linalg/HH_narray.rb +13 -0
  134. data/examples/linalg/LQ_solve.rb +73 -0
  135. data/examples/linalg/LU.rb +84 -0
  136. data/examples/linalg/LU2.rb +31 -0
  137. data/examples/linalg/LU_narray.rb +24 -0
  138. data/examples/linalg/PTLQ.rb +47 -0
  139. data/examples/linalg/QR.rb +18 -0
  140. data/examples/linalg/QRPT.rb +47 -0
  141. data/examples/linalg/QR_solve.rb +78 -0
  142. data/examples/linalg/QR_solve_narray.rb +13 -0
  143. data/examples/linalg/SV.rb +16 -0
  144. data/examples/linalg/SV_narray.rb +12 -0
  145. data/examples/linalg/SV_solve.rb +49 -0
  146. data/examples/linalg/chol.rb +29 -0
  147. data/examples/linalg/chol_narray.rb +15 -0
  148. data/examples/linalg/complex.rb +57 -0
  149. data/examples/linalg/invert_narray.rb +10 -0
  150. data/examples/math/const.rb +67 -0
  151. data/examples/math/elementary.rb +35 -0
  152. data/examples/math/functions.rb +41 -0
  153. data/examples/math/inf_nan.rb +34 -0
  154. data/examples/math/minmax.rb +22 -0
  155. data/examples/math/power.rb +18 -0
  156. data/examples/math/test.rb +31 -0
  157. data/examples/matrix/a.dat +0 -0
  158. data/examples/matrix/add.rb +45 -0
  159. data/examples/matrix/b.dat +4 -0
  160. data/examples/matrix/cat.rb +31 -0
  161. data/examples/matrix/colvectors.rb +24 -0
  162. data/examples/matrix/complex.rb +41 -0
  163. data/examples/matrix/det.rb +29 -0
  164. data/examples/matrix/diagonal.rb +23 -0
  165. data/examples/matrix/get_all.rb +159 -0
  166. data/examples/matrix/hilbert.rb +31 -0
  167. data/examples/matrix/iterator.rb +19 -0
  168. data/examples/matrix/matrix.rb +57 -0
  169. data/examples/matrix/minmax.rb +53 -0
  170. data/examples/matrix/mul.rb +39 -0
  171. data/examples/matrix/rand.rb +20 -0
  172. data/examples/matrix/read.rb +29 -0
  173. data/examples/matrix/rowcol.rb +47 -0
  174. data/examples/matrix/set.rb +41 -0
  175. data/examples/matrix/set_all.rb +100 -0
  176. data/examples/matrix/view.rb +32 -0
  177. data/examples/matrix/view_all.rb +148 -0
  178. data/examples/matrix/write.rb +23 -0
  179. data/examples/min.rb +29 -0
  180. data/examples/monte/miser.rb +47 -0
  181. data/examples/monte/monte.rb +47 -0
  182. data/examples/monte/plain.rb +47 -0
  183. data/examples/monte/vegas.rb +46 -0
  184. data/examples/multimin/bundle.rb +66 -0
  185. data/examples/multimin/cqp.rb +109 -0
  186. data/examples/multimin/fdfminimizer.rb +40 -0
  187. data/examples/multimin/fminimizer.rb +41 -0
  188. data/examples/multiroot/demo.rb +36 -0
  189. data/examples/multiroot/fdfsolver.rb +50 -0
  190. data/examples/multiroot/fsolver.rb +33 -0
  191. data/examples/multiroot/fsolver2.rb +32 -0
  192. data/examples/multiroot/fsolver3.rb +26 -0
  193. data/examples/narray/histogram.rb +14 -0
  194. data/examples/narray/mandel.rb +27 -0
  195. data/examples/narray/narray.rb +28 -0
  196. data/examples/narray/narray2.rb +44 -0
  197. data/examples/narray/sf.rb +26 -0
  198. data/examples/ntuple/create.rb +17 -0
  199. data/examples/ntuple/project.rb +31 -0
  200. data/examples/odeiv/binarysystem.gp +23 -0
  201. data/examples/odeiv/binarysystem.rb +104 -0
  202. data/examples/odeiv/demo.gp +24 -0
  203. data/examples/odeiv/demo.rb +69 -0
  204. data/examples/odeiv/demo2.gp +26 -0
  205. data/examples/odeiv/duffing.rb +45 -0
  206. data/examples/odeiv/frei1.rb +109 -0
  207. data/examples/odeiv/frei2.rb +76 -0
  208. data/examples/odeiv/legendre.rb +52 -0
  209. data/examples/odeiv/odeiv.rb +32 -0
  210. data/examples/odeiv/odeiv2.rb +45 -0
  211. data/examples/odeiv/oscillator.rb +42 -0
  212. data/examples/odeiv/sedov.rb +97 -0
  213. data/examples/odeiv/whitedwarf.gp +40 -0
  214. data/examples/odeiv/whitedwarf.rb +158 -0
  215. data/examples/ool/conmin.rb +100 -0
  216. data/examples/ool/gencan.rb +99 -0
  217. data/examples/ool/pgrad.rb +100 -0
  218. data/examples/ool/spg.rb +100 -0
  219. data/examples/pdf/bernoulli.rb +5 -0
  220. data/examples/pdf/beta.rb +7 -0
  221. data/examples/pdf/binomiral.rb +10 -0
  222. data/examples/pdf/cauchy.rb +6 -0
  223. data/examples/pdf/chisq.rb +8 -0
  224. data/examples/pdf/exponential.rb +7 -0
  225. data/examples/pdf/exppow.rb +6 -0
  226. data/examples/pdf/fdist.rb +7 -0
  227. data/examples/pdf/flat.rb +7 -0
  228. data/examples/pdf/gamma.rb +8 -0
  229. data/examples/pdf/gauss-tail.rb +5 -0
  230. data/examples/pdf/gauss.rb +6 -0
  231. data/examples/pdf/geometric.rb +5 -0
  232. data/examples/pdf/gumbel.rb +6 -0
  233. data/examples/pdf/hypergeometric.rb +11 -0
  234. data/examples/pdf/landau.rb +5 -0
  235. data/examples/pdf/laplace.rb +7 -0
  236. data/examples/pdf/logarithmic.rb +5 -0
  237. data/examples/pdf/logistic.rb +6 -0
  238. data/examples/pdf/lognormal.rb +6 -0
  239. data/examples/pdf/neg-binomiral.rb +10 -0
  240. data/examples/pdf/pareto.rb +7 -0
  241. data/examples/pdf/pascal.rb +10 -0
  242. data/examples/pdf/poisson.rb +5 -0
  243. data/examples/pdf/rayleigh-tail.rb +6 -0
  244. data/examples/pdf/rayleigh.rb +6 -0
  245. data/examples/pdf/tdist.rb +6 -0
  246. data/examples/pdf/weibull.rb +8 -0
  247. data/examples/permutation/ex1.rb +22 -0
  248. data/examples/permutation/permutation.rb +16 -0
  249. data/examples/poly/bell.rb +6 -0
  250. data/examples/poly/bessel.rb +6 -0
  251. data/examples/poly/cheb.rb +6 -0
  252. data/examples/poly/cheb_II.rb +6 -0
  253. data/examples/poly/cubic.rb +9 -0
  254. data/examples/poly/demo.rb +20 -0
  255. data/examples/poly/eval.rb +28 -0
  256. data/examples/poly/eval_derivs.rb +14 -0
  257. data/examples/poly/fit.rb +21 -0
  258. data/examples/poly/hermite.rb +6 -0
  259. data/examples/poly/poly.rb +13 -0
  260. data/examples/poly/quadratic.rb +25 -0
  261. data/examples/random/diffusion.rb +34 -0
  262. data/examples/random/gaussian.rb +9 -0
  263. data/examples/random/generator.rb +27 -0
  264. data/examples/random/hdsobol.rb +21 -0
  265. data/examples/random/poisson.rb +9 -0
  266. data/examples/random/qrng.rb +19 -0
  267. data/examples/random/randomwalk.rb +37 -0
  268. data/examples/random/randomwalk2d.rb +19 -0
  269. data/examples/random/rayleigh.rb +36 -0
  270. data/examples/random/rng.rb +33 -0
  271. data/examples/random/rngextra.rb +14 -0
  272. data/examples/roots/bisection.rb +25 -0
  273. data/examples/roots/brent.rb +43 -0
  274. data/examples/roots/demo.rb +30 -0
  275. data/examples/roots/newton.rb +46 -0
  276. data/examples/roots/recombination.gp +12 -0
  277. data/examples/roots/recombination.rb +61 -0
  278. data/examples/roots/steffenson.rb +48 -0
  279. data/examples/sf/ShiChi.rb +6 -0
  280. data/examples/sf/SiCi.rb +6 -0
  281. data/examples/sf/airy_Ai.rb +8 -0
  282. data/examples/sf/airy_Bi.rb +8 -0
  283. data/examples/sf/bessel_IK.rb +12 -0
  284. data/examples/sf/bessel_JY.rb +13 -0
  285. data/examples/sf/beta_inc.rb +9 -0
  286. data/examples/sf/clausen.rb +6 -0
  287. data/examples/sf/dawson.rb +5 -0
  288. data/examples/sf/debye.rb +9 -0
  289. data/examples/sf/dilog.rb +6 -0
  290. data/examples/sf/ellint.rb +6 -0
  291. data/examples/sf/expint.rb +8 -0
  292. data/examples/sf/fermi.rb +10 -0
  293. data/examples/sf/gamma_inc_P.rb +9 -0
  294. data/examples/sf/gegenbauer.rb +8 -0
  295. data/examples/sf/hyperg.rb +7 -0
  296. data/examples/sf/laguerre.rb +19 -0
  297. data/examples/sf/lambertW.rb +5 -0
  298. data/examples/sf/legendre_P.rb +10 -0
  299. data/examples/sf/lngamma.rb +5 -0
  300. data/examples/sf/psi.rb +54 -0
  301. data/examples/sf/sphbessel.gp +27 -0
  302. data/examples/sf/sphbessel.rb +30 -0
  303. data/examples/sf/synchrotron.rb +5 -0
  304. data/examples/sf/transport.rb +10 -0
  305. data/examples/sf/zetam1.rb +5 -0
  306. data/examples/siman.rb +44 -0
  307. data/examples/sort/heapsort.rb +23 -0
  308. data/examples/sort/heapsort_vector_complex.rb +21 -0
  309. data/examples/sort/sort.rb +23 -0
  310. data/examples/sort/sort2.rb +16 -0
  311. data/examples/stats/mean.rb +17 -0
  312. data/examples/stats/statistics.rb +18 -0
  313. data/examples/stats/test.rb +9 -0
  314. data/examples/sum.rb +34 -0
  315. data/examples/tamu_anova.rb +18 -0
  316. data/examples/vector/a.dat +0 -0
  317. data/examples/vector/add.rb +56 -0
  318. data/examples/vector/b.dat +4 -0
  319. data/examples/vector/c.dat +3 -0
  320. data/examples/vector/collect.rb +26 -0
  321. data/examples/vector/compare.rb +28 -0
  322. data/examples/vector/complex.rb +51 -0
  323. data/examples/vector/complex_get_all.rb +85 -0
  324. data/examples/vector/complex_set_all.rb +131 -0
  325. data/examples/vector/complex_view_all.rb +77 -0
  326. data/examples/vector/connect.rb +22 -0
  327. data/examples/vector/decimate.rb +38 -0
  328. data/examples/vector/diff.rb +31 -0
  329. data/examples/vector/filescan.rb +17 -0
  330. data/examples/vector/floor.rb +23 -0
  331. data/examples/vector/get_all.rb +82 -0
  332. data/examples/vector/gnuplot.rb +38 -0
  333. data/examples/vector/graph.rb +28 -0
  334. data/examples/vector/histogram.rb +22 -0
  335. data/examples/vector/linspace.rb +24 -0
  336. data/examples/vector/log.rb +17 -0
  337. data/examples/vector/logic.rb +33 -0
  338. data/examples/vector/logspace.rb +25 -0
  339. data/examples/vector/minmax.rb +47 -0
  340. data/examples/vector/mul.rb +49 -0
  341. data/examples/vector/narray.rb +46 -0
  342. data/examples/vector/read.rb +29 -0
  343. data/examples/vector/set.rb +35 -0
  344. data/examples/vector/set_all.rb +121 -0
  345. data/examples/vector/smpv.dat +15 -0
  346. data/examples/vector/test.rb +43 -0
  347. data/examples/vector/test_gslblock.rb +58 -0
  348. data/examples/vector/vector.rb +110 -0
  349. data/examples/vector/view.rb +35 -0
  350. data/examples/vector/view_all.rb +73 -0
  351. data/examples/vector/where.rb +29 -0
  352. data/examples/vector/write.rb +24 -0
  353. data/examples/vector/zip.rb +34 -0
  354. data/examples/wavelet/ecg.dat +256 -0
  355. data/examples/wavelet/wavelet1.rb +50 -0
  356. data/ext/alf.c +206 -0
  357. data/ext/array.c +642 -0
  358. data/ext/array_complex.c +248 -0
  359. data/ext/blas.c +29 -0
  360. data/ext/blas1.c +734 -0
  361. data/ext/blas2.c +1093 -0
  362. data/ext/blas3.c +881 -0
  363. data/ext/block.c +44 -0
  364. data/ext/block_source.c +887 -0
  365. data/ext/bspline.c +130 -0
  366. data/ext/bundle.c +3 -0
  367. data/ext/cdf.c +754 -0
  368. data/ext/cheb.c +542 -0
  369. data/ext/combination.c +283 -0
  370. data/ext/common.c +325 -0
  371. data/ext/complex.c +1004 -0
  372. data/ext/const.c +673 -0
  373. data/ext/const_additional.c +120 -0
  374. data/ext/cqp.c +283 -0
  375. data/ext/deriv.c +195 -0
  376. data/ext/dht.c +361 -0
  377. data/ext/diff.c +166 -0
  378. data/ext/dirac.c +389 -0
  379. data/ext/eigen.c +2373 -0
  380. data/ext/error.c +193 -0
  381. data/ext/extconf.rb +303 -0
  382. data/ext/fcmp.c +66 -0
  383. data/ext/fft.c +1102 -0
  384. data/ext/fit.c +205 -0
  385. data/ext/fresnel.c +312 -0
  386. data/ext/function.c +524 -0
  387. data/ext/geometry.c +139 -0
  388. data/ext/graph.c +1640 -0
  389. data/ext/gsl.c +280 -0
  390. data/ext/gsl_narray.c +804 -0
  391. data/ext/histogram.c +1991 -0
  392. data/ext/histogram2d.c +1068 -0
  393. data/ext/histogram3d.c +884 -0
  394. data/ext/histogram3d_source.c +750 -0
  395. data/ext/histogram_find.c +101 -0
  396. data/ext/histogram_oper.c +159 -0
  397. data/ext/ieee.c +100 -0
  398. data/ext/integration.c +1179 -0
  399. data/ext/interp.c +512 -0
  400. data/ext/jacobi.c +739 -0
  401. data/ext/linalg.c +4042 -0
  402. data/ext/linalg_complex.c +739 -0
  403. data/ext/math.c +725 -0
  404. data/ext/matrix.c +39 -0
  405. data/ext/matrix_complex.c +1737 -0
  406. data/ext/matrix_double.c +560 -0
  407. data/ext/matrix_int.c +256 -0
  408. data/ext/matrix_source.c +2734 -0
  409. data/ext/min.c +250 -0
  410. data/ext/monte.c +992 -0
  411. data/ext/multifit.c +1871 -0
  412. data/ext/multimin.c +806 -0
  413. data/ext/multimin_fsdf.c +156 -0
  414. data/ext/multiroots.c +955 -0
  415. data/ext/multiset.c +214 -0
  416. data/ext/ndlinear.c +321 -0
  417. data/ext/nmf.c +171 -0
  418. data/ext/nmf_wrap.c +75 -0
  419. data/ext/ntuple.c +469 -0
  420. data/ext/odeiv.c +962 -0
  421. data/ext/ool.c +879 -0
  422. data/ext/oper_complex_source.c +253 -0
  423. data/ext/permutation.c +596 -0
  424. data/ext/poly.c +42 -0
  425. data/ext/poly2.c +265 -0
  426. data/ext/poly_source.c +1915 -0
  427. data/ext/qrng.c +171 -0
  428. data/ext/randist.c +1873 -0
  429. data/ext/rational.c +480 -0
  430. data/ext/rng.c +612 -0
  431. data/ext/root.c +408 -0
  432. data/ext/sf.c +1494 -0
  433. data/ext/sf_airy.c +200 -0
  434. data/ext/sf_bessel.c +871 -0
  435. data/ext/sf_clausen.c +28 -0
  436. data/ext/sf_coulomb.c +206 -0
  437. data/ext/sf_coupling.c +121 -0
  438. data/ext/sf_dawson.c +29 -0
  439. data/ext/sf_debye.c +157 -0
  440. data/ext/sf_dilog.c +43 -0
  441. data/ext/sf_elementary.c +46 -0
  442. data/ext/sf_ellint.c +206 -0
  443. data/ext/sf_elljac.c +30 -0
  444. data/ext/sf_erfc.c +93 -0
  445. data/ext/sf_exp.c +169 -0
  446. data/ext/sf_expint.c +211 -0
  447. data/ext/sf_fermi_dirac.c +148 -0
  448. data/ext/sf_gamma.c +347 -0
  449. data/ext/sf_gegenbauer.c +97 -0
  450. data/ext/sf_hyperg.c +203 -0
  451. data/ext/sf_laguerre.c +113 -0
  452. data/ext/sf_lambert.c +47 -0
  453. data/ext/sf_legendre.c +368 -0
  454. data/ext/sf_log.c +105 -0
  455. data/ext/sf_mathieu.c +238 -0
  456. data/ext/sf_power.c +47 -0
  457. data/ext/sf_psi.c +98 -0
  458. data/ext/sf_synchrotron.c +48 -0
  459. data/ext/sf_transport.c +76 -0
  460. data/ext/sf_trigonometric.c +210 -0
  461. data/ext/sf_zeta.c +119 -0
  462. data/ext/signal.c +308 -0
  463. data/ext/siman.c +717 -0
  464. data/ext/sort.c +208 -0
  465. data/ext/spline.c +395 -0
  466. data/ext/stats.c +800 -0
  467. data/ext/sum.c +168 -0
  468. data/ext/tamu_anova.c +56 -0
  469. data/ext/tensor.c +38 -0
  470. data/ext/tensor_source.c +1123 -0
  471. data/ext/vector.c +38 -0
  472. data/ext/vector_complex.c +2246 -0
  473. data/ext/vector_double.c +1438 -0
  474. data/ext/vector_int.c +204 -0
  475. data/ext/vector_source.c +3336 -0
  476. data/ext/wavelet.c +945 -0
  477. data/include/rb_gsl.h +158 -0
  478. data/include/rb_gsl_array.h +238 -0
  479. data/include/rb_gsl_cheb.h +21 -0
  480. data/include/rb_gsl_common.h +348 -0
  481. data/include/rb_gsl_complex.h +25 -0
  482. data/include/rb_gsl_config.h +62 -0
  483. data/include/rb_gsl_const.h +29 -0
  484. data/include/rb_gsl_dirac.h +13 -0
  485. data/include/rb_gsl_eigen.h +17 -0
  486. data/include/rb_gsl_fft.h +62 -0
  487. data/include/rb_gsl_fit.h +25 -0
  488. data/include/rb_gsl_function.h +27 -0
  489. data/include/rb_gsl_graph.h +70 -0
  490. data/include/rb_gsl_histogram.h +63 -0
  491. data/include/rb_gsl_histogram3d.h +97 -0
  492. data/include/rb_gsl_integration.h +17 -0
  493. data/include/rb_gsl_interp.h +46 -0
  494. data/include/rb_gsl_linalg.h +25 -0
  495. data/include/rb_gsl_math.h +26 -0
  496. data/include/rb_gsl_odeiv.h +21 -0
  497. data/include/rb_gsl_poly.h +71 -0
  498. data/include/rb_gsl_rational.h +37 -0
  499. data/include/rb_gsl_rng.h +21 -0
  500. data/include/rb_gsl_root.h +22 -0
  501. data/include/rb_gsl_sf.h +119 -0
  502. data/include/rb_gsl_statistics.h +17 -0
  503. data/include/rb_gsl_tensor.h +45 -0
  504. data/include/rb_gsl_with_narray.h +29 -0
  505. data/include/templates_off.h +87 -0
  506. data/include/templates_on.h +241 -0
  507. data/lib/gsl.rb +3 -0
  508. data/lib/gsl/gnuplot.rb +41 -0
  509. data/lib/gsl/oper.rb +68 -0
  510. data/lib/ool.rb +22 -0
  511. data/lib/ool/conmin.rb +30 -0
  512. data/lib/rbgsl.rb +3 -0
  513. data/rdoc/alf.rdoc +77 -0
  514. data/rdoc/blas.rdoc +269 -0
  515. data/rdoc/bspline.rdoc +42 -0
  516. data/rdoc/changes.rdoc +164 -0
  517. data/rdoc/cheb.rdoc +99 -0
  518. data/rdoc/cholesky_complex.rdoc +46 -0
  519. data/rdoc/combi.rdoc +125 -0
  520. data/rdoc/complex.rdoc +210 -0
  521. data/rdoc/const.rdoc +546 -0
  522. data/rdoc/dht.rdoc +122 -0
  523. data/rdoc/diff.rdoc +133 -0
  524. data/rdoc/ehandling.rdoc +50 -0
  525. data/rdoc/eigen.rdoc +401 -0
  526. data/rdoc/fft.rdoc +535 -0
  527. data/rdoc/fit.rdoc +284 -0
  528. data/rdoc/function.rdoc +94 -0
  529. data/rdoc/graph.rdoc +137 -0
  530. data/rdoc/hist.rdoc +409 -0
  531. data/rdoc/hist2d.rdoc +279 -0
  532. data/rdoc/hist3d.rdoc +112 -0
  533. data/rdoc/index.rdoc +62 -0
  534. data/rdoc/integration.rdoc +398 -0
  535. data/rdoc/interp.rdoc +231 -0
  536. data/rdoc/intro.rdoc +27 -0
  537. data/rdoc/linalg.rdoc +681 -0
  538. data/rdoc/linalg_complex.rdoc +88 -0
  539. data/rdoc/math.rdoc +276 -0
  540. data/rdoc/matrix.rdoc +1093 -0
  541. data/rdoc/min.rdoc +189 -0
  542. data/rdoc/monte.rdoc +234 -0
  543. data/rdoc/multimin.rdoc +312 -0
  544. data/rdoc/multiroot.rdoc +293 -0
  545. data/rdoc/narray.rdoc +177 -0
  546. data/rdoc/ndlinear.rdoc +250 -0
  547. data/rdoc/nonlinearfit.rdoc +348 -0
  548. data/rdoc/ntuple.rdoc +88 -0
  549. data/rdoc/odeiv.rdoc +378 -0
  550. data/rdoc/perm.rdoc +221 -0
  551. data/rdoc/poly.rdoc +335 -0
  552. data/rdoc/qrng.rdoc +90 -0
  553. data/rdoc/randist.rdoc +233 -0
  554. data/rdoc/ref.rdoc +93 -0
  555. data/rdoc/rng.rdoc +203 -0
  556. data/rdoc/rngextra.rdoc +11 -0
  557. data/rdoc/roots.rdoc +305 -0
  558. data/rdoc/screenshot.rdoc +40 -0
  559. data/rdoc/sf.rdoc +1622 -0
  560. data/rdoc/siman.rdoc +89 -0
  561. data/rdoc/sort.rdoc +94 -0
  562. data/rdoc/start.rdoc +16 -0
  563. data/rdoc/stats.rdoc +219 -0
  564. data/rdoc/sum.rdoc +65 -0
  565. data/rdoc/tensor.rdoc +251 -0
  566. data/rdoc/tut.rdoc +5 -0
  567. data/rdoc/use.rdoc +177 -0
  568. data/rdoc/vector.rdoc +1243 -0
  569. data/rdoc/vector_complex.rdoc +347 -0
  570. data/rdoc/wavelet.rdoc +218 -0
  571. data/setup.rb +1585 -0
  572. data/tests/blas/amax.rb +14 -0
  573. data/tests/blas/asum.rb +16 -0
  574. data/tests/blas/axpy.rb +25 -0
  575. data/tests/blas/copy.rb +23 -0
  576. data/tests/blas/dot.rb +23 -0
  577. data/tests/bspline.rb +53 -0
  578. data/tests/cdf.rb +1388 -0
  579. data/tests/cheb.rb +112 -0
  580. data/tests/combination.rb +123 -0
  581. data/tests/complex.rb +17 -0
  582. data/tests/const.rb +24 -0
  583. data/tests/deriv.rb +85 -0
  584. data/tests/dht/dht1.rb +17 -0
  585. data/tests/dht/dht2.rb +23 -0
  586. data/tests/dht/dht3.rb +23 -0
  587. data/tests/dht/dht4.rb +23 -0
  588. data/tests/diff.rb +78 -0
  589. data/tests/eigen/eigen.rb +220 -0
  590. data/tests/eigen/gen.rb +105 -0
  591. data/tests/eigen/genherm.rb +66 -0
  592. data/tests/eigen/gensymm.rb +68 -0
  593. data/tests/eigen/nonsymm.rb +53 -0
  594. data/tests/eigen/nonsymmv.rb +53 -0
  595. data/tests/eigen/symm-herm.rb +74 -0
  596. data/tests/err.rb +58 -0
  597. data/tests/fit.rb +124 -0
  598. data/tests/gsl_test.rb +118 -0
  599. data/tests/gsl_test2.rb +110 -0
  600. data/tests/histo.rb +12 -0
  601. data/tests/integration/integration1.rb +72 -0
  602. data/tests/integration/integration2.rb +71 -0
  603. data/tests/integration/integration3.rb +71 -0
  604. data/tests/integration/integration4.rb +71 -0
  605. data/tests/interp.rb +45 -0
  606. data/tests/linalg/HH.rb +64 -0
  607. data/tests/linalg/LU.rb +47 -0
  608. data/tests/linalg/QR.rb +77 -0
  609. data/tests/linalg/SV.rb +24 -0
  610. data/tests/linalg/TDN.rb +116 -0
  611. data/tests/linalg/TDS.rb +122 -0
  612. data/tests/linalg/bidiag.rb +73 -0
  613. data/tests/linalg/cholesky.rb +20 -0
  614. data/tests/linalg/linalg.rb +158 -0
  615. data/tests/matrix/matrix_complex_test.rb +36 -0
  616. data/tests/matrix/matrix_nmf_test.rb +39 -0
  617. data/tests/matrix/matrix_test.rb +48 -0
  618. data/tests/min.rb +99 -0
  619. data/tests/monte/miser.rb +31 -0
  620. data/tests/monte/vegas.rb +45 -0
  621. data/tests/multifit/test_2dgauss.rb +112 -0
  622. data/tests/multifit/test_brown.rb +90 -0
  623. data/tests/multifit/test_enso.rb +246 -0
  624. data/tests/multifit/test_filip.rb +155 -0
  625. data/tests/multifit/test_gauss.rb +97 -0
  626. data/tests/multifit/test_longley.rb +110 -0
  627. data/tests/multifit/test_multifit.rb +52 -0
  628. data/tests/multimin.rb +139 -0
  629. data/tests/multiroot.rb +131 -0
  630. data/tests/multiset.rb +52 -0
  631. data/tests/narray/blas_dnrm2.rb +20 -0
  632. data/tests/odeiv.rb +353 -0
  633. data/tests/poly/poly.rb +290 -0
  634. data/tests/poly/special.rb +65 -0
  635. data/tests/qrng.rb +131 -0
  636. data/tests/quartic.rb +29 -0
  637. data/tests/randist.rb +134 -0
  638. data/tests/rng.rb +305 -0
  639. data/tests/roots.rb +76 -0
  640. data/tests/run-test.sh +17 -0
  641. data/tests/sf/gsl_test_sf.rb +249 -0
  642. data/tests/sf/test_airy.rb +83 -0
  643. data/tests/sf/test_bessel.rb +306 -0
  644. data/tests/sf/test_coulomb.rb +17 -0
  645. data/tests/sf/test_dilog.rb +25 -0
  646. data/tests/sf/test_gamma.rb +209 -0
  647. data/tests/sf/test_hyperg.rb +356 -0
  648. data/tests/sf/test_legendre.rb +227 -0
  649. data/tests/sf/test_mathieu.rb +59 -0
  650. data/tests/sf/test_mode.rb +19 -0
  651. data/tests/sf/test_sf.rb +839 -0
  652. data/tests/stats.rb +174 -0
  653. data/tests/stats_mt.rb +16 -0
  654. data/tests/sum.rb +98 -0
  655. data/tests/sys.rb +323 -0
  656. data/tests/tensor.rb +419 -0
  657. data/tests/vector/vector_complex_test.rb +101 -0
  658. data/tests/vector/vector_test.rb +141 -0
  659. data/tests/wavelet.rb +142 -0
  660. metadata +789 -0
@@ -0,0 +1,1991 @@
1
+ /*
2
+ histogram.c
3
+ Ruby/GSL: Ruby extension library for GSL (GNU Scientific Library)
4
+ (C) Copyright 2001-2006 by Yoshiki Tsunesada
5
+
6
+ Ruby/GSL is free software: you can redistribute it and/or modify it
7
+ under the terms of the GNU General Public License.
8
+ This library is distributed in the hope that it will be useful, but
9
+ WITHOUT ANY WARRANTY.
10
+ */
11
+
12
+ #include "rb_gsl_config.h"
13
+ #include "rb_gsl_histogram.h"
14
+ #include "rb_gsl_array.h"
15
+ #include <gsl/gsl_fit.h>
16
+ #include <gsl/gsl_multifit_nlin.h>
17
+ #include <gsl/gsl_blas.h>
18
+
19
+ VALUE cgsl_histogram;
20
+ VALUE cgsl_histogram_range;
21
+ VALUE cgsl_histogram_bin;
22
+ static VALUE cgsl_histogram_integ;
23
+
24
+ static VALUE rb_gsl_histogram_alloc_from_file(VALUE klass, VALUE name);
25
+ #ifdef GSL_0_9_4_LATER
26
+ static VALUE rb_gsl_histogram_alloc(int argc, VALUE *argv, VALUE klass)
27
+ {
28
+ gsl_histogram *h = NULL;
29
+ gsl_vector *v;
30
+ double min, max;
31
+ size_t n, size;
32
+ switch (argc) {
33
+ case 1:
34
+ switch (TYPE(argv[0])) {
35
+ case T_FIXNUM:
36
+ n = FIX2INT(argv[0]);
37
+ h = gsl_histogram_alloc(n);
38
+ break;
39
+ case T_ARRAY:
40
+ v = make_cvector_from_rarray(argv[0]);
41
+ h = gsl_histogram_alloc(v->size-1);
42
+ gsl_histogram_set_ranges(h, v->data, v->size);
43
+ gsl_vector_free(v);
44
+ break;
45
+ case T_STRING:
46
+ return rb_gsl_histogram_alloc_from_file(klass, argv[0]);
47
+ break;
48
+ default:
49
+ CHECK_VECTOR(argv[0]);
50
+ Data_Get_Struct(argv[0], gsl_vector, v);
51
+ h = gsl_histogram_alloc(v->size-1);
52
+ gsl_histogram_set_ranges(h, v->data, v->size);
53
+ break;
54
+ }
55
+ return Data_Wrap_Struct(klass, 0, gsl_histogram_free, h);
56
+ break;
57
+ case 3:
58
+ CHECK_FIXNUM(argv[0]);
59
+ Need_Float(argv[1]); Need_Float(argv[2]);
60
+ n = FIX2INT(argv[0]);
61
+ min = NUM2DBL(argv[1]);
62
+ max = NUM2DBL(argv[2]);
63
+ h = gsl_histogram_calloc(n);
64
+ gsl_histogram_set_ranges_uniform(h, min, max);
65
+ return Data_Wrap_Struct(klass, 0, gsl_histogram_free, h);
66
+ break;
67
+ case 2:
68
+ switch (TYPE(argv[0])) {
69
+ case T_FIXNUM:
70
+ CHECK_FIXNUM(argv[0]);
71
+ if (TYPE(argv[1]) != T_ARRAY) {
72
+ rb_raise(rb_eTypeError, "wrong argument type %s (Array expected)",
73
+ rb_class2name(CLASS_OF(argv[1])));
74
+ }
75
+ n = FIX2INT(argv[0]);
76
+ min = NUM2DBL(rb_ary_entry(argv[1], 0));
77
+ max = NUM2DBL(rb_ary_entry(argv[1], 1));
78
+ h = gsl_histogram_calloc(n);
79
+ gsl_histogram_set_ranges_uniform(h, min, max);
80
+ return Data_Wrap_Struct(klass, 0, gsl_histogram_free, h);
81
+ break;
82
+ case T_ARRAY:
83
+ CHECK_FIXNUM(argv[1]);
84
+ v = make_cvector_from_rarray(argv[0]);
85
+ size = FIX2INT(argv[1]);
86
+ h = gsl_histogram_calloc(size-1);
87
+ gsl_histogram_set_ranges(h, v->data, size);
88
+ gsl_vector_free(v);
89
+ return Data_Wrap_Struct(klass, 0, gsl_histogram_free, h);
90
+ break;
91
+ default:
92
+ CHECK_VECTOR(argv[0]);
93
+ CHECK_FIXNUM(argv[1]);
94
+ Data_Get_Struct(argv[0], gsl_vector, v);
95
+ size = FIX2INT(argv[1]);
96
+ h = gsl_histogram_calloc(size-1);
97
+ gsl_histogram_set_ranges(h, v->data, size);
98
+ return Data_Wrap_Struct(klass, 0, gsl_histogram_free, h);
99
+ break;
100
+ }
101
+ break;
102
+ default:
103
+ rb_raise(rb_eArgError, "wrong number of arguments (%d for 1, 2, 3)", argc);
104
+ break;
105
+ }
106
+
107
+ }
108
+
109
+ static VALUE rb_gsl_histogram_alloc_from_file(VALUE klass, VALUE name)
110
+ {
111
+ char filename[1024], buf[1024];
112
+ gsl_histogram *h;
113
+ int nn;
114
+ size_t n, i;
115
+ FILE *fp = NULL;
116
+ double upper;
117
+ strcpy(filename, STR2CHARPTR(name));
118
+ sprintf(buf, "wc %s", filename);
119
+ fp = popen(buf, "r");
120
+ if (fp == NULL) rb_raise(rb_eIOError, "popen failed.");
121
+ fgets(buf, 1024, fp);
122
+ pclose(fp);
123
+ sscanf(buf, "%d", &nn);
124
+ n = (size_t) nn; /* vector length */
125
+ fp = fopen(filename, "r");
126
+ if (fp == NULL) rb_raise(rb_eIOError, "cannot open file %s.", filename);
127
+ h = gsl_histogram_alloc(n);
128
+ i = 0;
129
+ while (fgets(buf, 1024, fp)) {
130
+ sscanf(buf, "%lg %lg %lg", h->range+i, &upper, h->bin+i);
131
+ i++;
132
+ }
133
+ h->range[n] = upper;
134
+ fclose(fp);
135
+ return Data_Wrap_Struct(klass, 0, gsl_histogram_free, h);
136
+
137
+ }
138
+
139
+ /* initialization + set uniform ranges (equal spacing from min to max) */
140
+ static VALUE rb_gsl_histogram_alloc_uniform(int argc, VALUE *argv, VALUE klass)
141
+ {
142
+ gsl_histogram *h = NULL;
143
+ double min, max, tmp;
144
+ size_t n;
145
+ switch (argc) {
146
+ case 3:
147
+ CHECK_FIXNUM(argv[0]);
148
+ Need_Float(argv[1]); Need_Float(argv[2]);
149
+ n = FIX2INT(argv[0]);
150
+ min = NUM2DBL(argv[1]);
151
+ max = NUM2DBL(argv[2]);
152
+ break;
153
+ case 2:
154
+ CHECK_FIXNUM(argv[0]);
155
+ n = FIX2INT(argv[0]);
156
+ Check_Type(argv[1], T_ARRAY);
157
+ min = NUM2DBL(rb_ary_entry(argv[1], 0));
158
+ max = NUM2DBL(rb_ary_entry(argv[1], 1));
159
+ break;
160
+ default:
161
+ rb_raise(rb_eArgError, "wrong number of arguments (%d for 2 or 3)", argc);
162
+ break;
163
+ }
164
+ if (min > max) {
165
+ tmp = min;
166
+ min = max;
167
+ max = tmp;
168
+ }
169
+ h = gsl_histogram_alloc(n);
170
+ gsl_histogram_set_ranges_uniform(h, min, max);
171
+ return Data_Wrap_Struct(klass, 0, gsl_histogram_free, h);
172
+ }
173
+
174
+ /* initialization + set ranges with a given spacing from min to max */
175
+ static VALUE rb_gsl_histogram_alloc_with_min_max_step(VALUE klass, VALUE vmin,
176
+ VALUE vmax, VALUE ss)
177
+ {
178
+ gsl_histogram *h = NULL;
179
+ gsl_vector *v = NULL;
180
+ double min, max, tmp, step;
181
+ size_t i, n;
182
+ Need_Float(vmin); Need_Float(vmax); Need_Float(ss);
183
+ min = NUM2DBL(vmin);
184
+ max = NUM2DBL(vmax);
185
+ step = NUM2DBL(ss);
186
+ if (min > max) {
187
+ tmp = min;
188
+ min = max;
189
+ max = tmp;
190
+ }
191
+ n = (int) ((max - min)/step);
192
+ h = gsl_histogram_alloc(n);
193
+ v = gsl_vector_alloc(n + 1);
194
+ for (i = 0; i < n + 1; i++) gsl_vector_set(v, i, min + step*i);
195
+ gsl_histogram_set_ranges(h, v->data, v->size);
196
+ gsl_vector_free(v);
197
+ return Data_Wrap_Struct(klass, 0, gsl_histogram_free, h);
198
+ }
199
+ #endif
200
+
201
+ static VALUE rb_gsl_histogram_calloc(VALUE klass, VALUE nn)
202
+ {
203
+ gsl_histogram *h = NULL;
204
+ CHECK_FIXNUM(nn);
205
+ h = gsl_histogram_calloc(FIX2INT(nn));
206
+ return Data_Wrap_Struct(klass, 0, gsl_histogram_free, h);
207
+ }
208
+
209
+ static VALUE rb_gsl_histogram_calloc_range(int argc, VALUE *argv, VALUE klass)
210
+ {
211
+ gsl_histogram *h = NULL;
212
+ gsl_vector *v = NULL;
213
+ size_t n;
214
+ switch (argc) {
215
+ case 1:
216
+ CHECK_VECTOR(argv[0]);
217
+ Data_Get_Struct(argv[0], gsl_vector, v);
218
+ n = v->size;
219
+ break;
220
+ case 2:
221
+ CHECK_FIXNUM(argv[0]);
222
+ CHECK_VECTOR(argv[1]);
223
+ n = FIX2INT(argv[0]);
224
+ Data_Get_Struct(argv[1], gsl_vector, v);
225
+ break;
226
+ default:
227
+ rb_raise(rb_eArgError, "wrong number of arguments (%d for 1 or 2)", argc);
228
+ break;
229
+ }
230
+ h = gsl_histogram_calloc_range(n, v->data);
231
+ return Data_Wrap_Struct(klass, 0, gsl_histogram_free, h);
232
+ }
233
+
234
+ static VALUE rb_gsl_histogram_bins(VALUE obj)
235
+ {
236
+ gsl_histogram *h = NULL;
237
+ Data_Get_Struct(obj, gsl_histogram, h);
238
+ return INT2FIX(gsl_histogram_bins(h));
239
+ }
240
+
241
+ static VALUE rb_gsl_histogram_set_ranges(int argc, VALUE *argv, VALUE obj)
242
+ {
243
+ gsl_histogram *h = NULL;
244
+ gsl_vector *v = NULL;
245
+ size_t size;
246
+ Data_Get_Struct(obj, gsl_histogram, h);
247
+ if (argc != 1 && argc != 2)
248
+ rb_raise(rb_eArgError, "wrong number of arguments (%d for 1 or 2)", argc);
249
+ if (TYPE(argv[0]) == T_ARRAY) {
250
+ v = make_cvector_from_rarray(argv[0]);
251
+ if (argc == 1) size = v->size;
252
+ else size = FIX2INT(argv[1]);
253
+ gsl_histogram_set_ranges(h, v->data, size);
254
+ gsl_vector_free(v);
255
+ } else {
256
+ CHECK_VECTOR(argv[0]);
257
+ Data_Get_Struct(argv[0], gsl_vector, v);
258
+ if (argc == 1) size = v->size;
259
+ else size = FIX2INT(argv[1]);
260
+ gsl_histogram_set_ranges(h, v->data, size);
261
+ }
262
+ return obj;
263
+ }
264
+
265
+ static VALUE rb_gsl_histogram_range(VALUE obj)
266
+ {
267
+ gsl_histogram *h = NULL;
268
+ gsl_vector_view *v = NULL;
269
+ Data_Get_Struct(obj, gsl_histogram, h);
270
+ v = gsl_vector_view_alloc();
271
+ v->vector.data = h->range;
272
+ v->vector.size = h->n + 1;
273
+ v->vector.stride = 1;
274
+ return Data_Wrap_Struct(cgsl_histogram_range, 0, gsl_vector_view_free, v);
275
+ }
276
+
277
+ static VALUE rb_gsl_histogram_bin(VALUE obj)
278
+ {
279
+ gsl_histogram *h = NULL;
280
+ gsl_vector_view *v = NULL;
281
+ Data_Get_Struct(obj, gsl_histogram, h);
282
+ v = gsl_vector_view_alloc();
283
+ v->vector.data = h->bin;
284
+ v->vector.size = h->n;
285
+ v->vector.stride = 1;
286
+ return Data_Wrap_Struct(cgsl_histogram_bin, 0, gsl_vector_view_free, v);
287
+ }
288
+
289
+ static VALUE rb_gsl_histogram_set_ranges_uniform(int argc, VALUE *argv, VALUE obj)
290
+ {
291
+ gsl_histogram *h = NULL;
292
+ double xmin, xmax;
293
+ switch (argc) {
294
+ case 1:
295
+ Check_Type(argv[0], T_ARRAY);
296
+ xmin = NUM2DBL(rb_ary_entry(argv[0], 0));
297
+ xmax = NUM2DBL(rb_ary_entry(argv[0], 1));
298
+ break;
299
+ case 2:
300
+ xmin = NUM2DBL(argv[0]);
301
+ xmax = NUM2DBL(argv[1]);
302
+ break;
303
+ default:
304
+ rb_raise(rb_eArgError, "wrong number of arguments (%d for 1 or 2)", argc);
305
+ break;
306
+ }
307
+ Data_Get_Struct(obj, gsl_histogram, h);
308
+ gsl_histogram_set_ranges_uniform(h, xmin, xmax);
309
+ return obj;
310
+ }
311
+
312
+ /* singleton */
313
+ static VALUE rb_gsl_histogram_memcpy(VALUE obj, VALUE vhdest, VALUE vhsrc)
314
+ {
315
+ gsl_histogram *hdest = NULL, *hsrc = NULL;
316
+ CHECK_HISTOGRAM(vhdest);
317
+ CHECK_HISTOGRAM(vhsrc);
318
+ Data_Get_Struct(vhdest, gsl_histogram, hdest);
319
+ Data_Get_Struct(vhsrc, gsl_histogram, hsrc);
320
+ gsl_histogram_memcpy(hdest, hsrc);
321
+ return vhdest;
322
+ }
323
+
324
+ static VALUE rb_gsl_histogram_clone(VALUE obj)
325
+ {
326
+ gsl_histogram *hsrc = NULL, *hnew = NULL;
327
+ Data_Get_Struct(obj, gsl_histogram, hsrc);
328
+ hnew = gsl_histogram_clone(hsrc);
329
+ return Data_Wrap_Struct(CLASS_OF(obj), 0, gsl_histogram_free, hnew);
330
+ }
331
+
332
+ static VALUE rb_gsl_histogram_accumulate(int argc, VALUE *argv, VALUE obj)
333
+ {
334
+ gsl_histogram *h = NULL;
335
+ gsl_vector *v;
336
+ gsl_vector_int *vi;
337
+ size_t i;
338
+ double weight = 1;
339
+ #ifdef HAVE_NARRAY_H
340
+ double *ptr;
341
+ size_t size, stride;
342
+ #endif
343
+ switch (argc) {
344
+ case 2:
345
+ Need_Float(argv[1]);
346
+ weight = NUM2DBL(argv[1]);
347
+ break;
348
+ case 1:
349
+ weight = 1;
350
+ break;
351
+ default:
352
+ rb_raise(rb_eArgError, "wrong number of arguments (%d for 1 or 2)", argc);
353
+ break;
354
+ }
355
+ Data_Get_Struct(obj, gsl_histogram, h);
356
+ if (TYPE(argv[0]) == T_ARRAY) {
357
+ // for (i = 0; i < RARRAY(argv[0])->len; i++)
358
+ for (i = 0; i < RARRAY_LEN(argv[0]); i++)
359
+ gsl_histogram_accumulate(h, NUM2DBL(rb_ary_entry(argv[0], i)), weight);
360
+ } else if (VECTOR_P(argv[0])) {
361
+ Data_Get_Struct(argv[0], gsl_vector, v);
362
+ for (i = 0; i < v->size; i++)
363
+ gsl_histogram_accumulate(h, gsl_vector_get(v, i), weight);
364
+ } else if (VECTOR_INT_P(argv[0])) {
365
+ Data_Get_Struct(argv[0], gsl_vector_int, vi);
366
+ for (i = 0; i < vi->size; i++)
367
+ gsl_histogram_accumulate(h, (double)gsl_vector_int_get(vi, i), weight);
368
+ #ifdef HAVE_NARRAY_H
369
+ } else if (NA_IsNArray(argv[0])) {
370
+ ptr = get_vector_ptr(argv[0], &stride, &size);
371
+ for (i = 0; i < size; i++)
372
+ gsl_histogram_accumulate(h, ptr[i], weight);
373
+ #endif
374
+ } else {
375
+ gsl_histogram_accumulate(h, NUM2DBL(argv[0]), weight);
376
+ }
377
+ return argv[0];
378
+ }
379
+
380
+ static VALUE rb_gsl_histogram_accumulate2(int argc, VALUE *argv, VALUE obj)
381
+ {
382
+ gsl_histogram *h = NULL;
383
+ double weight = 1;
384
+ double x;
385
+ switch (argc) {
386
+ case 2:
387
+ Need_Float(argv[1]);
388
+ weight = NUM2DBL(argv[1]);
389
+ /* no break; */
390
+ case 1:
391
+ Need_Float(argv[0]);
392
+ x = NUM2DBL(argv[0]);
393
+ break;
394
+ default:
395
+ rb_raise(rb_eArgError, "wrong number of arguments (%d for 1 or 2)", argc);
396
+ break;
397
+ }
398
+ Data_Get_Struct(obj, gsl_histogram, h);
399
+ if (x < h->range[0]) x = h->range[0] + 4*GSL_DBL_EPSILON;
400
+ if (x > h->range[h->n]) x = h->range[h->n] - 4*GSL_DBL_EPSILON;
401
+ gsl_histogram_accumulate(h, x, weight);
402
+ return argv[0];
403
+ }
404
+
405
+ static VALUE rb_gsl_histogram_get(VALUE obj, VALUE i)
406
+ {
407
+ gsl_histogram *h = NULL;
408
+ CHECK_FIXNUM(i);
409
+ Data_Get_Struct(obj, gsl_histogram, h);
410
+ return rb_float_new(gsl_histogram_get(h, FIX2INT(i)));
411
+ }
412
+
413
+ static VALUE rb_gsl_histogram_get_range(VALUE obj, VALUE i)
414
+ {
415
+ gsl_histogram *h = NULL;
416
+ double lower, upper;
417
+ CHECK_FIXNUM(i);
418
+ Data_Get_Struct(obj, gsl_histogram, h);
419
+ gsl_histogram_get_range(h, FIX2INT(i), &lower, &upper);
420
+ return rb_ary_new3(2, rb_float_new(lower), rb_float_new(upper));
421
+ }
422
+
423
+ static VALUE rb_gsl_histogram_max(VALUE obj)
424
+ {
425
+ gsl_histogram *h = NULL;
426
+ Data_Get_Struct(obj, gsl_histogram, h);
427
+ return rb_float_new(gsl_histogram_max(h));
428
+ }
429
+
430
+ static VALUE rb_gsl_histogram_min(VALUE obj)
431
+ {
432
+ gsl_histogram *h = NULL;
433
+ Data_Get_Struct(obj, gsl_histogram, h);
434
+ return rb_float_new(gsl_histogram_min(h));
435
+ }
436
+
437
+ static VALUE rb_gsl_histogram_reset(VALUE obj)
438
+ {
439
+ gsl_histogram *h = NULL;
440
+ Data_Get_Struct(obj, gsl_histogram, h);
441
+ gsl_histogram_reset(h);
442
+ return obj;
443
+ }
444
+
445
+ static VALUE rb_gsl_histogram_find(VALUE obj, VALUE x)
446
+ {
447
+ gsl_histogram *h = NULL;
448
+ size_t i;
449
+ Need_Float(x);
450
+ Data_Get_Struct(obj, gsl_histogram, h);
451
+ gsl_histogram_find(h, NUM2DBL(x), &i);
452
+ return INT2FIX(i);
453
+ }
454
+
455
+ static VALUE rb_gsl_histogram_max_val(VALUE obj)
456
+ {
457
+ gsl_histogram *h = NULL;
458
+ Data_Get_Struct(obj, gsl_histogram, h);
459
+ return rb_float_new(gsl_histogram_max_val(h));
460
+ }
461
+
462
+ static VALUE rb_gsl_histogram_max_bin(VALUE obj)
463
+ {
464
+ gsl_histogram *h = NULL;
465
+ Data_Get_Struct(obj, gsl_histogram, h);
466
+ return INT2FIX(gsl_histogram_max_bin(h));
467
+ }
468
+
469
+ static VALUE rb_gsl_histogram_min_val(VALUE obj)
470
+ {
471
+ gsl_histogram *h = NULL;
472
+ Data_Get_Struct(obj, gsl_histogram, h);
473
+ return rb_float_new(gsl_histogram_min_val(h));
474
+ }
475
+
476
+ static VALUE rb_gsl_histogram_min_bin(VALUE obj)
477
+ {
478
+ gsl_histogram *h = NULL;
479
+ Data_Get_Struct(obj, gsl_histogram, h);
480
+ return INT2FIX(gsl_histogram_min_bin(h));
481
+ }
482
+
483
+ static VALUE rb_gsl_histogram_mean(VALUE obj)
484
+ {
485
+ gsl_histogram *h = NULL;
486
+ Data_Get_Struct(obj, gsl_histogram, h);
487
+ return rb_float_new(gsl_histogram_mean(h));
488
+ }
489
+
490
+ static VALUE rb_gsl_histogram_sigma(VALUE obj)
491
+ {
492
+ gsl_histogram *h = NULL;
493
+ Data_Get_Struct(obj, gsl_histogram, h);
494
+ return rb_float_new(gsl_histogram_sigma(h));
495
+ }
496
+
497
+ #ifndef GSL_1_1_LATER
498
+ double gsl_histogram_sum(const gsl_histogram * h)
499
+ {
500
+ double sum=0;
501
+ size_t i=0, n;
502
+ n=h->n;
503
+ while(i < n) sum += h->bin[i++];
504
+ return sum;
505
+ }
506
+ #endif
507
+
508
+ static VALUE rb_gsl_histogram_sum(VALUE obj)
509
+ {
510
+ gsl_histogram *h = NULL;
511
+ Data_Get_Struct(obj, gsl_histogram, h);
512
+ if (CLASS_OF(obj) == cgsl_histogram_integ)
513
+ return rb_float_new(gsl_histogram_get(h, h->n-1));
514
+ else
515
+ return rb_float_new(gsl_histogram_sum(h));
516
+ }
517
+
518
+ static VALUE rb_gsl_histogram_normalize_bang(VALUE obj)
519
+ {
520
+ gsl_histogram *h = NULL;
521
+ double scale;
522
+ Data_Get_Struct(obj, gsl_histogram, h);
523
+ if (CLASS_OF(obj) == cgsl_histogram_integ)
524
+ scale = 1.0/gsl_histogram_get(h, h->n-1);
525
+ else
526
+ scale = 1.0/gsl_histogram_sum(h);
527
+ gsl_histogram_scale(h, scale);
528
+ return obj;
529
+ }
530
+
531
+ static VALUE rb_gsl_histogram_normalize(VALUE obj)
532
+ {
533
+ gsl_histogram *h = NULL, *hnew = NULL;
534
+ Data_Get_Struct(obj, gsl_histogram, h);
535
+ hnew = gsl_histogram_clone(h);
536
+ return rb_gsl_histogram_normalize_bang(Data_Wrap_Struct(CLASS_OF(obj), 0, gsl_histogram_free, hnew));
537
+ }
538
+
539
+ static VALUE rb_gsl_histogram_integral(int argc, VALUE *argv, VALUE obj)
540
+ {
541
+ gsl_histogram *h = NULL;
542
+ size_t istart = 0, iend, i = 0;
543
+ double sum = 0.0;
544
+ Data_Get_Struct(obj, gsl_histogram, h);
545
+ switch (argc) {
546
+ case 0:
547
+ return rb_gsl_histogram_sum(obj);
548
+ break;
549
+ case 1:
550
+ CHECK_FIXNUM(argv[0]);
551
+ istart = 0; iend = FIX2INT(argv[0]);
552
+ break;
553
+ case 2:
554
+ CHECK_FIXNUM(argv[0]); CHECK_FIXNUM(argv[1]);
555
+ istart = FIX2INT(argv[0]);
556
+ iend = FIX2INT(argv[1]);
557
+ break;
558
+ default:
559
+ rb_raise(rb_eArgError, "wrong number of arguments (%d for 0-2)", argc);
560
+ break;
561
+ }
562
+ if (iend >= h->n) iend = h->n - 1;
563
+ i = istart;
564
+ while (i <= iend) sum += h->bin[i++];
565
+ return rb_float_new(sum);
566
+ }
567
+
568
+ static VALUE rb_gsl_histogram_equal_bins_p(int argc, VALUE *argv, VALUE obj)
569
+ {
570
+ gsl_histogram *h1 = NULL, *h2 = NULL;
571
+ switch (TYPE(obj)) {
572
+ case T_MODULE:
573
+ case T_CLASS:
574
+ case T_OBJECT:
575
+ if (argc != 2) rb_raise(rb_eArgError, "wrong number of arguments (%d for 2)",
576
+ argc);
577
+ CHECK_HISTOGRAM(argv[0]);
578
+ CHECK_HISTOGRAM(argv[1]);
579
+ Data_Get_Struct(argv[0], gsl_histogram, h1);
580
+ Data_Get_Struct(argv[1], gsl_histogram, h2);
581
+ break;
582
+ default:
583
+ if (argc != 1) rb_raise(rb_eArgError, "wrong number of arguments (%d for 2)",
584
+ argc);
585
+ Data_Get_Struct(obj, gsl_histogram, h1);
586
+ CHECK_HISTOGRAM(argv[0]);
587
+ Data_Get_Struct(argv[0], gsl_histogram, h2);
588
+ break;
589
+ }
590
+ return INT2FIX(gsl_histogram_equal_bins_p(h1, h2));
591
+ }
592
+
593
+ static VALUE rb_gsl_histogram_equal_bins_p2(int argc, VALUE *argv, VALUE obj)
594
+ {
595
+ gsl_histogram *h1 = NULL, *h2 = NULL;
596
+ switch (TYPE(obj)) {
597
+ case T_MODULE:
598
+ case T_CLASS:
599
+ case T_OBJECT:
600
+ if (argc != 2) rb_raise(rb_eArgError, "wrong number of arguments (%d for 2)",
601
+ argc);
602
+ CHECK_HISTOGRAM(argv[0]);
603
+ CHECK_HISTOGRAM(argv[1]);
604
+ Data_Get_Struct(argv[0], gsl_histogram, h1);
605
+ Data_Get_Struct(argv[1], gsl_histogram, h2);
606
+ break;
607
+ default:
608
+ if (argc != 1) rb_raise(rb_eArgError, "wrong number of arguments (%d for 2)",
609
+ argc);
610
+ Data_Get_Struct(obj, gsl_histogram, h1);
611
+ CHECK_HISTOGRAM(argv[0]);
612
+ Data_Get_Struct(argv[0], gsl_histogram, h2);
613
+ break;
614
+ }
615
+ if (gsl_histogram_equal_bins_p(h1, h2)) return Qtrue;
616
+ else return Qfalse;
617
+ }
618
+
619
+ static VALUE rb_gsl_histogram_add(VALUE obj, VALUE hh2)
620
+ {
621
+ gsl_histogram *h1 = NULL, *h2 = NULL, *hnew = NULL;
622
+ Data_Get_Struct(obj, gsl_histogram, h1);
623
+ hnew = gsl_histogram_clone(h1);
624
+ if (HISTOGRAM_P(hh2)) {
625
+ Data_Get_Struct(hh2, gsl_histogram, h2);
626
+ mygsl_histogram_add(hnew, h2);
627
+ } else {
628
+ Need_Float(hh2);
629
+ gsl_histogram_shift(hnew, NUM2DBL(hh2));
630
+ }
631
+ return Data_Wrap_Struct(CLASS_OF(obj), 0, gsl_histogram_free, hnew);
632
+ }
633
+
634
+ static VALUE rb_gsl_histogram_add2(VALUE obj, VALUE hh2)
635
+ {
636
+ gsl_histogram *h1 = NULL, *h2 = NULL;
637
+ Data_Get_Struct(obj, gsl_histogram, h1);
638
+ if (HISTOGRAM_P(hh2)) {
639
+ Data_Get_Struct(hh2, gsl_histogram, h2);
640
+ mygsl_histogram_add(h1, h2);
641
+ } else {
642
+ Need_Float(hh2);
643
+ gsl_histogram_shift(h1, NUM2DBL(hh2));
644
+ }
645
+ return obj;
646
+ }
647
+
648
+ static VALUE rb_gsl_histogram_sub(VALUE obj, VALUE hh2)
649
+ {
650
+ gsl_histogram *h1 = NULL, *h2 = NULL, *hnew = NULL;
651
+ Data_Get_Struct(obj, gsl_histogram, h1);
652
+ hnew = gsl_histogram_clone(h1);
653
+ if (HISTOGRAM_P(hh2)) {
654
+ Data_Get_Struct(hh2, gsl_histogram, h2);
655
+ mygsl_histogram_sub(hnew, h2);
656
+ } else {
657
+ Need_Float(hh2);
658
+ gsl_histogram_shift(hnew, -NUM2DBL(hh2));
659
+ }
660
+ return Data_Wrap_Struct(CLASS_OF(obj), 0, gsl_histogram_free, hnew);
661
+ }
662
+
663
+ static VALUE rb_gsl_histogram_sub2(VALUE obj, VALUE hh2)
664
+ {
665
+ gsl_histogram *h1 = NULL, *h2 = NULL;
666
+ Data_Get_Struct(obj, gsl_histogram, h1);
667
+ if (HISTOGRAM_P(hh2)) {
668
+ Data_Get_Struct(hh2, gsl_histogram, h2);
669
+ mygsl_histogram_sub(h1, h2);
670
+ } else {
671
+ Need_Float(hh2);
672
+ gsl_histogram_shift(h1, -NUM2DBL(hh2));
673
+ }
674
+ return obj;
675
+ }
676
+
677
+ static VALUE rb_gsl_histogram_mul(VALUE obj, VALUE hh2)
678
+ {
679
+ gsl_histogram *h1 = NULL, *h2 = NULL, *hnew = NULL;
680
+ Data_Get_Struct(obj, gsl_histogram, h1);
681
+ hnew = gsl_histogram_clone(h1);
682
+ if (HISTOGRAM_P(hh2)) {
683
+ Data_Get_Struct(hh2, gsl_histogram, h2);
684
+ mygsl_histogram_mul(hnew, h2);
685
+ } else {
686
+ Need_Float(hh2);
687
+ gsl_histogram_scale(hnew, NUM2DBL(hh2));
688
+ }
689
+ return Data_Wrap_Struct(CLASS_OF(obj), 0, gsl_histogram_free, hnew);
690
+ }
691
+
692
+ static VALUE rb_gsl_histogram_mul2(VALUE obj, VALUE hh2)
693
+ {
694
+ gsl_histogram *h1 = NULL, *h2 = NULL;
695
+ Data_Get_Struct(obj, gsl_histogram, h1);
696
+ if (HISTOGRAM_P(hh2)) {
697
+ Data_Get_Struct(hh2, gsl_histogram, h2);
698
+ mygsl_histogram_mul(h1, h2);
699
+ } else {
700
+ Need_Float(hh2);
701
+ gsl_histogram_scale(h1, NUM2DBL(hh2));
702
+ }
703
+ return obj;
704
+ }
705
+
706
+ static VALUE rb_gsl_histogram_div(VALUE obj, VALUE hh2)
707
+ {
708
+ gsl_histogram *h1 = NULL, *h2 = NULL, *hnew = NULL;
709
+ Data_Get_Struct(obj, gsl_histogram, h1);
710
+ hnew = gsl_histogram_clone(h1);
711
+ if (HISTOGRAM_P(hh2)) {
712
+ Data_Get_Struct(hh2, gsl_histogram, h2);
713
+ mygsl_histogram_div(hnew, h2);
714
+ } else {
715
+ Need_Float(hh2);
716
+ gsl_histogram_scale(hnew, 1.0/NUM2DBL(hh2));
717
+ }
718
+ return Data_Wrap_Struct(CLASS_OF(obj), 0, gsl_histogram_free, hnew);
719
+ }
720
+
721
+ static VALUE rb_gsl_histogram_div2(VALUE obj, VALUE hh2)
722
+ {
723
+ gsl_histogram *h1 = NULL, *h2 = NULL;
724
+ Data_Get_Struct(obj, gsl_histogram, h1);
725
+ if (HISTOGRAM_P(hh2)) {
726
+ Data_Get_Struct(hh2, gsl_histogram, h2);
727
+ mygsl_histogram_div(h1, h2);
728
+ } else {
729
+ Need_Float(hh2);
730
+ gsl_histogram_scale(h1, 1.0/NUM2DBL(hh2));
731
+ }
732
+ return obj;
733
+ }
734
+
735
+ static VALUE rb_gsl_histogram_scale_bang(int argc, VALUE *argv, VALUE obj)
736
+ {
737
+ gsl_histogram *h = NULL;
738
+ double scale;
739
+ Data_Get_Struct(obj, gsl_histogram, h);
740
+ switch (argc) {
741
+ case 0:
742
+ if (CLASS_OF(obj) == cgsl_histogram_integ)
743
+ scale = 1.0/h->bin[h->n-1];
744
+ else
745
+ scale = 1.0/gsl_histogram_sum(h);
746
+ break;
747
+ case 1:
748
+ scale = NUM2DBL(argv[0]);
749
+ break;
750
+ default:
751
+ rb_raise(rb_eArgError, "wrong number of arguments (%d for 1 or 2)", argc);
752
+ break;
753
+ }
754
+ gsl_histogram_scale(h, scale);
755
+ return obj;
756
+ }
757
+
758
+ static VALUE rb_gsl_histogram_scale(int argc, VALUE *argv, VALUE obj)
759
+ {
760
+ gsl_histogram *h = NULL, *hnew = NULL;
761
+ double scale;
762
+ Data_Get_Struct(obj, gsl_histogram, h);
763
+ switch (argc) {
764
+ case 0:
765
+ if (CLASS_OF(obj) == cgsl_histogram_integ)
766
+ scale = 1.0/h->bin[h->n-1];
767
+ else
768
+ scale = 1.0/gsl_histogram_sum(h);
769
+ break;
770
+ case 1:
771
+ scale = NUM2DBL(argv[0]);
772
+ break;
773
+ default:
774
+ rb_raise(rb_eArgError, "wrong number of arguments (%d for 1 or 2)", argc);
775
+ break;
776
+ }
777
+ hnew = gsl_histogram_clone(h);
778
+ gsl_histogram_scale(hnew, scale);
779
+ return Data_Wrap_Struct(CLASS_OF(obj), 0, gsl_histogram_free, hnew);
780
+ }
781
+
782
+ static VALUE rb_gsl_histogram_shift(VALUE obj, VALUE shift)
783
+ {
784
+ gsl_histogram *h = NULL;
785
+ Need_Float(shift);
786
+ Data_Get_Struct(obj, gsl_histogram, h);
787
+ gsl_histogram_shift(h, NUM2DBL(shift));
788
+ return obj;
789
+ }
790
+
791
+ static VALUE rb_gsl_histogram_shift2(VALUE obj, VALUE shift)
792
+ {
793
+ gsl_histogram *h = NULL, *hnew = NULL;
794
+ Need_Float(shift);
795
+ Data_Get_Struct(obj, gsl_histogram, h);
796
+ hnew = gsl_histogram_clone(h);
797
+ gsl_histogram_shift(hnew, NUM2DBL(shift));
798
+ return Data_Wrap_Struct(CLASS_OF(obj), 0, gsl_histogram_free, hnew);
799
+ }
800
+
801
+ static VALUE rb_gsl_histogram_fwrite(VALUE obj, VALUE io)
802
+ {
803
+ gsl_histogram *h = NULL;
804
+ FILE *f;
805
+ int status, flag = 0;
806
+ Data_Get_Struct(obj, gsl_histogram, h);
807
+ f = rb_gsl_open_writefile(io, &flag);
808
+ status = gsl_histogram_fwrite(f, h);
809
+ if (flag == 1) fclose(f);
810
+ return INT2FIX(status);
811
+ }
812
+
813
+ static VALUE rb_gsl_histogram_fread(VALUE obj, VALUE io)
814
+ {
815
+ gsl_histogram *h = NULL;
816
+ FILE *f;
817
+ int status, flag = 0;
818
+ Data_Get_Struct(obj, gsl_histogram, h);
819
+ f = rb_gsl_open_readfile(io, &flag);
820
+ status = gsl_histogram_fread(f, h);
821
+ if (flag == 1) fclose(f);
822
+ return INT2FIX(status);
823
+ }
824
+
825
+ static VALUE rb_gsl_histogram_fprintf(int argc, VALUE *argv, VALUE obj)
826
+ {
827
+ gsl_histogram *h = NULL;
828
+ FILE *fp;
829
+ int status, flag = 0;
830
+
831
+ if (argc != 1 && argc != 3) {
832
+ rb_raise(rb_eArgError, "wrong number of arguments (%d for 1 or 3)", argc);
833
+ }
834
+ Data_Get_Struct(obj, gsl_histogram, h);
835
+ fp = rb_gsl_open_writefile(argv[0], &flag);
836
+ if (argc == 3) {
837
+ Check_Type(argv[1], T_STRING);
838
+ Check_Type(argv[2], T_STRING);
839
+ status = gsl_histogram_fprintf(fp, h, STR2CSTR(argv[1]), STR2CSTR(argv[2]));
840
+ } else {
841
+ status = gsl_histogram_fprintf(fp, h, "%g", "%g");
842
+ }
843
+ if (flag == 1) fclose(fp);
844
+ return INT2FIX(status);
845
+ }
846
+
847
+ static VALUE rb_gsl_histogram_printf(int argc, VALUE *argv, VALUE obj)
848
+ {
849
+ gsl_histogram *h = NULL;
850
+ int status;
851
+ Data_Get_Struct(obj, gsl_histogram, h);
852
+ if (argc == 2) {
853
+ Check_Type(argv[0], T_STRING);
854
+ Check_Type(argv[1], T_STRING);
855
+ status = gsl_histogram_fprintf(stdout, h, STR2CSTR(argv[0]), STR2CSTR(argv[1]));
856
+ } else {
857
+ status = gsl_histogram_fprintf(stdout, h, "%g", "%g");
858
+ }
859
+ return INT2FIX(status);
860
+ }
861
+
862
+ static VALUE rb_gsl_histogram_fscanf(VALUE obj, VALUE io)
863
+ {
864
+ gsl_histogram *h = NULL;
865
+ FILE *fp;
866
+ int status, flag = 0;
867
+ Data_Get_Struct(obj, gsl_histogram, h);
868
+ fp = rb_gsl_open_readfile(io, &flag);
869
+ status = gsl_histogram_fscanf(fp, h);
870
+ if (flag == 1) fclose(fp);
871
+ return INT2FIX(status);
872
+ }
873
+
874
+ static VALUE rb_gsl_histogram_print(VALUE obj)
875
+ {
876
+ gsl_histogram *h = NULL;
877
+ int status;
878
+ Data_Get_Struct(obj, gsl_histogram, h);
879
+ status = gsl_histogram_fprintf(stdout, h, "%g", "%g");
880
+ return INT2FIX(status);
881
+ }
882
+
883
+ static VALUE rb_gsl_histogram_pdf_alloc(VALUE klass, VALUE nn)
884
+ {
885
+ gsl_histogram_pdf *h = NULL;
886
+ gsl_histogram *h0 = NULL;
887
+ #ifdef GSL_0_9_4_LATER
888
+ if (rb_obj_is_kind_of(nn, cgsl_histogram)) {
889
+ Data_Get_Struct(nn, gsl_histogram, h0);
890
+ h = gsl_histogram_pdf_alloc(h0->n);
891
+ gsl_histogram_pdf_init(h, h0);
892
+ } else {
893
+ CHECK_FIXNUM(nn);
894
+ h = gsl_histogram_pdf_alloc(FIX2INT(nn));
895
+ }
896
+ #else
897
+ gsl_histogram *hh = NULL;
898
+ Data_Get_Struct(nn, gsl_histogram, hh);
899
+ h = gsl_histogram_pdf_alloc(hh);
900
+ #endif
901
+ return Data_Wrap_Struct(klass, 0, gsl_histogram_pdf_free, h);
902
+ }
903
+
904
+ #ifdef GSL_0_9_4_LATER
905
+ static VALUE rb_gsl_histogram_pdf_init(VALUE obj, VALUE hh)
906
+ {
907
+ gsl_histogram_pdf *p = NULL;
908
+ gsl_histogram *h = NULL;
909
+ CHECK_HISTOGRAM(hh);
910
+ Data_Get_Struct(obj, gsl_histogram_pdf, p);
911
+ Data_Get_Struct(hh, gsl_histogram, h);
912
+ gsl_histogram_pdf_init(p, h);
913
+ return obj;
914
+ }
915
+ #endif
916
+
917
+ static VALUE rb_gsl_histogram_pdf_sample(VALUE obj, VALUE r)
918
+ {
919
+ gsl_histogram_pdf *p = NULL;
920
+ Need_Float(r);
921
+ Data_Get_Struct(obj, gsl_histogram_pdf, p);
922
+ return rb_float_new(gsl_histogram_pdf_sample(p, NUM2DBL(r)));
923
+ }
924
+
925
+ static VALUE rb_gsl_histogram_pdf_range(VALUE obj)
926
+ {
927
+ gsl_histogram_pdf *h = NULL;
928
+ gsl_vector_view *v = NULL;
929
+ Data_Get_Struct(obj, gsl_histogram_pdf, h);
930
+ v = gsl_vector_view_alloc(h->n);
931
+ v->vector.data = h->range;
932
+ v->vector.size = h->n + 1;
933
+ v->vector.stride = 1;
934
+ return Data_Wrap_Struct(cgsl_histogram_range, 0, gsl_vector_view_free, v);
935
+ }
936
+
937
+ static VALUE rb_gsl_histogram_pdf_sum(VALUE obj)
938
+ {
939
+ gsl_histogram_pdf *h = NULL;
940
+ gsl_vector_view *v = NULL;
941
+ Data_Get_Struct(obj, gsl_histogram_pdf, h);
942
+ v = gsl_vector_view_alloc(h->n);
943
+ v->vector.data = h->sum;
944
+ v->vector.size = h->n + 1;
945
+ v->vector.stride = 1;
946
+ return Data_Wrap_Struct(cgsl_vector_view_ro, 0, gsl_vector_view_free, v);
947
+ }
948
+
949
+ static VALUE rb_gsl_histogram_graph(int argc, VALUE *argv, VALUE obj)
950
+ {
951
+ #ifdef HAVE_GNU_GRAPH
952
+ gsl_histogram *v = NULL;
953
+ FILE *fp = NULL;
954
+ size_t i;
955
+ char command[1024];
956
+ Data_Get_Struct(obj, gsl_histogram, v);
957
+ switch (argc) {
958
+ case 0:
959
+ strcpy(command, "graph -T X -g 3");
960
+ break;
961
+ case 1:
962
+ make_graphcommand(command, argv[0]);
963
+ break;
964
+ default:
965
+ rb_raise(rb_eArgError, "wrong number of arguments (%d for 0 or 1)", argc);
966
+ break;
967
+ }
968
+ fp = popen(command, "w");
969
+ if (fp == NULL) rb_raise(rb_eIOError, "GNU graph not found.");
970
+ for (i = 0; i < v->n; i++) {
971
+ fprintf(fp, "%e %e\n%e %e\n", v->range[i], v->bin[i], v->range[i+1], v->bin[i]);
972
+ }
973
+ fflush(fp);
974
+ pclose(fp);
975
+ fp = NULL;
976
+ return Qtrue;
977
+ #else
978
+ rb_raise(rb_eNoMethodError, "not implemented");
979
+ return Qfalse;
980
+ #endif
981
+ }
982
+
983
+ static VALUE rb_gsl_histogram_plot(int argc, VALUE *argv, VALUE obj)
984
+ {
985
+ #ifdef HAVE_GNU_GRAPH
986
+ gsl_histogram *v = NULL;
987
+ FILE *fp = NULL;
988
+ size_t i;
989
+ Data_Get_Struct(obj, gsl_histogram, v);
990
+ switch (argc) {
991
+ case 0:
992
+ fp = popen("gnuplot -persist", "w");
993
+ if (fp == NULL) rb_raise(rb_eIOError, "GNU graph not found.");
994
+ fprintf(fp, "plot '-' with fsteps\n");
995
+ break;
996
+ case 1:
997
+ fp = popen("gnuplot -persist", "w");
998
+ if (fp == NULL) rb_raise(rb_eIOError, "GNU graph not found.");
999
+ if (TYPE(argv[0]) == T_STRING)
1000
+ fprintf(fp, "plot '-' %s\n", STR2CSTR(argv[0]));
1001
+ else
1002
+ fprintf(fp, "plot '-' with fsteps\n");
1003
+ break;
1004
+ default:
1005
+ rb_raise(rb_eArgError, "wrong number of arguments (%d for 0 or 1)", argc);
1006
+ break;
1007
+ }
1008
+ for (i = 0; i < v->n; i++) {
1009
+ fprintf(fp, "%e %e\n", v->range[i], v->bin[i]);
1010
+ }
1011
+ fprintf(fp, "e\n");
1012
+ fflush(fp);
1013
+ pclose(fp);
1014
+ fp = NULL;
1015
+ return Qtrue;
1016
+ #else
1017
+ rb_raise(rb_eNoMethodError, "not implemented");
1018
+ return Qfalse;
1019
+ #endif
1020
+ }
1021
+
1022
+ struct fit_histogram {
1023
+ gsl_histogram *h;
1024
+ size_t binstart, binend;
1025
+ };
1026
+
1027
+ static VALUE rb_gsl_histogram_fit_exponential(int argc, VALUE *argv, VALUE obj)
1028
+ {
1029
+ gsl_histogram *h;
1030
+ gsl_vector *x, *lny, *w;
1031
+ size_t binstart = 0, binend, n, p = 2, dof, i;
1032
+ double c0, c1, cov00, cov01, cov11, sumsq, xl, xh;
1033
+ Data_Get_Struct(obj, gsl_histogram, h);
1034
+ binstart = 0;
1035
+ binend = h->n - 1;
1036
+ switch (argc) {
1037
+ case 2:
1038
+ CHECK_FIXNUM(argv[0]); CHECK_FIXNUM(argv[1]);
1039
+ binstart = FIX2INT(argv[0]);
1040
+ binend = FIX2INT(argv[1]);
1041
+ if (binend >= h->n) binend = h->n - 1;
1042
+ break;
1043
+ case 0:
1044
+ break;
1045
+ default:
1046
+ rb_raise(rb_eArgError, "too many arguments (%d for 0 or 2)", argc);
1047
+ break;
1048
+ }
1049
+ n = binend - binstart + 1;
1050
+ dof = n - p;
1051
+
1052
+ x = gsl_vector_alloc(n);
1053
+ w = gsl_vector_alloc(n);
1054
+ lny = gsl_vector_alloc(n);
1055
+ for (i = 0; i < n; i++) {
1056
+ if (gsl_histogram_get_range(h, i+binstart, &xl, &xh))
1057
+ rb_raise(rb_eIndexError, "wrong index");
1058
+ gsl_vector_set(x, i, (xl+xh)/2.0);
1059
+ gsl_vector_set(lny, i, log(h->bin[i+binstart]));
1060
+ gsl_vector_set(w, i, h->bin[i+binstart]);
1061
+ }
1062
+ gsl_fit_wlinear(x->data, 1, w->data, 1, lny->data, 1, n,
1063
+ &c0, &c1, &cov00, &cov01, &cov11, &sumsq);
1064
+ gsl_vector_free(lny);
1065
+ gsl_vector_free(w);
1066
+ gsl_vector_free(x);
1067
+ c0 = exp(c0);
1068
+ return rb_ary_new3(6, rb_float_new(c0), rb_float_new(c1),
1069
+ rb_float_new(c0*sqrt(cov00)), rb_float_new(sqrt(cov11)),
1070
+ rb_float_new(sumsq), INT2FIX(dof));
1071
+ }
1072
+
1073
+ static VALUE rb_gsl_histogram_fit_power(int argc, VALUE *argv, VALUE obj)
1074
+ {
1075
+ gsl_histogram *h;
1076
+ gsl_vector *lnx, *lny, *w;
1077
+ size_t binstart = 0, binend, n, p = 2, dof, i;
1078
+ double c0, c1, cov00, cov01, cov11, sumsq, xl, xh;
1079
+ Data_Get_Struct(obj, gsl_histogram, h);
1080
+ binstart = 0;
1081
+ binend = h->n - 1;
1082
+ switch (argc) {
1083
+ case 2:
1084
+ CHECK_FIXNUM(argv[0]); CHECK_FIXNUM(argv[1]);
1085
+ binstart = FIX2INT(argv[0]);
1086
+ binend = FIX2INT(argv[1]);
1087
+ if (binend >= h->n) binend = h->n - 1;
1088
+ break;
1089
+ case 0:
1090
+ break;
1091
+ default:
1092
+ rb_raise(rb_eArgError, "too many arguments (%d for 0 or 2)", argc);
1093
+ break;
1094
+ }
1095
+ n = binend - binstart + 1;
1096
+ dof = n - p;
1097
+
1098
+ lnx = gsl_vector_alloc(n);
1099
+ w = gsl_vector_alloc(n);
1100
+ lny = gsl_vector_alloc(n);
1101
+ for (i = 0; i < n; i++) {
1102
+ if (gsl_histogram_get_range(h, i+binstart, &xl, &xh))
1103
+ rb_raise(rb_eIndexError, "wrong index");
1104
+ gsl_vector_set(lnx, i, (log(xl)+log(xh))/2.0);
1105
+ gsl_vector_set(lny, i, log(h->bin[i+binstart]));
1106
+ gsl_vector_set(w, i, h->bin[i+binstart]);
1107
+ }
1108
+ gsl_fit_wlinear(lnx->data, 1, w->data, 1, lny->data, 1, n,
1109
+ &c0, &c1, &cov00, &cov01, &cov11, &sumsq);
1110
+ gsl_vector_free(lny);
1111
+ gsl_vector_free(w);
1112
+ gsl_vector_free(lnx);
1113
+ c0 = exp(c0);
1114
+ return rb_ary_new3(6, rb_float_new(c0), rb_float_new(c1),
1115
+ rb_float_new(c0*sqrt(cov00)), rb_float_new(sqrt(cov11)),
1116
+ rb_float_new(sumsq), INT2FIX(dof));
1117
+ }
1118
+
1119
+ static int Gaussian_f(const gsl_vector *v, void *params, gsl_vector *f);
1120
+ static int Gaussian_df(const gsl_vector *v, void *params, gsl_matrix * J);
1121
+ static int Gaussian_f(const gsl_vector *v, void *params, gsl_vector *f)
1122
+ {
1123
+ struct fit_histogram *hh;
1124
+ gsl_histogram *h = NULL;
1125
+ double amp, mu, var, xl, xh, xi, yi, sqw;
1126
+ size_t i, binstart, binend;
1127
+ hh = (struct fit_histogram *) params;
1128
+ h = hh->h;
1129
+ binstart = hh->binstart;
1130
+ binend = hh->binend;
1131
+ var = gsl_vector_get(v, 0);
1132
+ mu = gsl_vector_get(v, 1);
1133
+ amp = gsl_vector_get(v, 2);
1134
+ for (i = binstart; i <= binend; i++) {
1135
+ if (gsl_histogram_get_range(h, i, &xl, &xh))
1136
+ rb_raise(rb_eIndexError, "wrong index");
1137
+ xi = (xl + xh)/2.0;
1138
+ yi = h->bin[i];
1139
+ // sqw = sqrt(yi);
1140
+ if (yi >= 1.0) sqw = 1.0/sqrt(yi);
1141
+ else sqw = 1.0;
1142
+ gsl_vector_set(f, i-binstart, (amp*exp(-(xi - mu)*(xi - mu)/var/2.0) - yi)*sqw);
1143
+ }
1144
+ return GSL_SUCCESS;
1145
+ }
1146
+
1147
+ static int Gaussian_df(const gsl_vector *v, void *params, gsl_matrix *J)
1148
+ {
1149
+ struct fit_histogram *hh;
1150
+ gsl_histogram *h = NULL;
1151
+ double amp, mu, var, xl, xh, xi, yi, y, sqw;
1152
+ size_t i, binstart, binend;
1153
+ hh = (struct fit_histogram *) params;
1154
+ h = hh->h;
1155
+ binstart = hh->binstart;
1156
+ binend = hh->binend;
1157
+ var = gsl_vector_get(v, 0);
1158
+ mu = gsl_vector_get(v, 1);
1159
+ amp = gsl_vector_get(v, 2);
1160
+ for (i = binstart; i <= binend; i++) {
1161
+ if (gsl_histogram_get_range(h, i, &xl, &xh))
1162
+ rb_raise(rb_eIndexError, "wrong index");
1163
+ xi = (xl + xh)/2.0;
1164
+ yi = h->bin[i];
1165
+ // sqw = sqrt(yi);
1166
+ if (yi >= 1.0) sqw = 1.0/sqrt(yi);
1167
+ else sqw = 1.0;
1168
+ y = exp(-(xi - mu)*(xi - mu)/var/2.0);
1169
+ gsl_matrix_set(J, i-binstart, 0, amp*y*(xi - mu)*(xi - mu)/2/var/var*sqw);
1170
+ gsl_matrix_set(J, i-binstart, 1, amp*y*(xi - mu)/var*sqw);
1171
+ gsl_matrix_set(J, i-binstart, 2, y*sqw);
1172
+ }
1173
+ return GSL_SUCCESS;
1174
+ }
1175
+
1176
+ static int Gaussian_fdf(const gsl_vector *v, void *params, gsl_vector *f,
1177
+ gsl_matrix *J)
1178
+ {
1179
+ Gaussian_f(v, params, f);
1180
+ Gaussian_df(v, params, J);
1181
+ return GSL_SUCCESS;
1182
+ }
1183
+
1184
+ static VALUE rb_gsl_histogram_fit_gaussian(int argc, VALUE *argv, VALUE obj)
1185
+ {
1186
+ gsl_histogram *h = NULL;
1187
+ struct fit_histogram hh;
1188
+ const gsl_multifit_fdfsolver_type *T;
1189
+ gsl_multifit_fdfsolver *s;
1190
+ int status;
1191
+ size_t iter = 0, binstart, binend;
1192
+ size_t n, dof; /* # of data points */
1193
+ size_t p = 3; /* # of fitting parameters */
1194
+ gsl_multifit_function_fdf f;
1195
+ gsl_matrix *covar = NULL;
1196
+ gsl_vector *x = NULL;
1197
+ double sigma, mean, height, errs, errm, errh, chi2;
1198
+ Data_Get_Struct(obj, gsl_histogram, h);
1199
+ binstart = 0;
1200
+ binend = h->n - 1;
1201
+ switch (argc) {
1202
+ case 2:
1203
+ CHECK_FIXNUM(argv[0]); CHECK_FIXNUM(argv[1]);
1204
+ binstart = FIX2INT(argv[0]);
1205
+ binend = FIX2INT(argv[1]);
1206
+ if (binend >= h->n) binend = h->n - 1;
1207
+ break;
1208
+ case 0:
1209
+ break;
1210
+ default:
1211
+ rb_raise(rb_eArgError, "too many arguments (%d for 0 or 2)", argc);
1212
+ break;
1213
+ }
1214
+ x = gsl_vector_alloc(p);
1215
+ gsl_vector_set(x, 0, gsl_pow_2(gsl_histogram_sigma(h))); /* initial values, var = 1 */
1216
+ gsl_vector_set(x, 1, gsl_histogram_mean(h)); /* mu = 0 */
1217
+ gsl_vector_set(x, 2, gsl_histogram_max_val(h)); /* amp = 1 */
1218
+ hh.h = h;
1219
+ hh.binstart = binstart;
1220
+ hh.binend = binend;
1221
+ n = binend - binstart + 1;
1222
+
1223
+ covar = gsl_matrix_alloc(p, p);
1224
+
1225
+ f.f = Gaussian_f;
1226
+ f.df = Gaussian_df;
1227
+ f.fdf = Gaussian_fdf;
1228
+ f.n = n;
1229
+ f.p = p;
1230
+ f.params = &hh;
1231
+
1232
+ T = gsl_multifit_fdfsolver_lmsder;
1233
+ s = gsl_multifit_fdfsolver_alloc(T, n, p);
1234
+ gsl_multifit_fdfsolver_set(s, &f, x);
1235
+
1236
+ do {
1237
+ iter++;
1238
+ status = gsl_multifit_fdfsolver_iterate(s);
1239
+ if (status) break;
1240
+ status = gsl_multifit_test_delta(s->dx, s->x, 1e-4, 1e-4);
1241
+ } while (status == GSL_CONTINUE);
1242
+ sigma = sqrt(gsl_vector_get(s->x, 0));
1243
+ mean = gsl_vector_get(s->x, 1);
1244
+ height = gsl_vector_get(s->x, 2)*sigma*sqrt(2*M_PI);
1245
+ gsl_multifit_covar(s->J, 0.0, covar);
1246
+ chi2 = gsl_pow_2(gsl_blas_dnrm2(s->f)); /* not reduced chi-square */
1247
+ dof = n - p;
1248
+ errs = sqrt(chi2/dof*gsl_matrix_get(covar, 0, 0))/sigma/2;
1249
+ errm = sqrt(chi2/dof*gsl_matrix_get(covar, 1, 1));
1250
+ errh = sqrt(chi2/dof*gsl_matrix_get(covar, 2, 2));
1251
+
1252
+ gsl_multifit_fdfsolver_free(s);
1253
+ gsl_vector_free(x);
1254
+ gsl_matrix_free(covar);
1255
+ return rb_ary_new3(8, rb_float_new(sigma), rb_float_new(mean),
1256
+ rb_float_new(height), rb_float_new(errs),
1257
+ rb_float_new(errm), rb_float_new(errh),
1258
+ rb_float_new(chi2), INT2FIX(dof));
1259
+ }
1260
+
1261
+ static int Rayleigh_f(const gsl_vector *v, void *params, gsl_vector *f);
1262
+ static int Rayleigh_df(const gsl_vector *v, void *params, gsl_matrix * J);
1263
+ static int Rayleigh_f(const gsl_vector *v, void *params, gsl_vector *f)
1264
+ {
1265
+ struct fit_histogram *hh;
1266
+ gsl_histogram *h = NULL;
1267
+ double amp, var, xl, xh, xi, yi, sqw;
1268
+ size_t i, binstart, binend;
1269
+ hh = (struct fit_histogram *) params;
1270
+ h = hh->h;
1271
+ binstart = hh->binstart;
1272
+ binend = hh->binend;
1273
+ var = gsl_vector_get(v, 0);
1274
+ amp = gsl_vector_get(v, 1);
1275
+ for (i = binstart; i <= binend; i++) {
1276
+ if (gsl_histogram_get_range(h, i, &xl, &xh))
1277
+ rb_raise(rb_eIndexError, "wrong index");
1278
+ xi = (xl + xh)/2.0;
1279
+ yi = h->bin[i];
1280
+ sqw = sqrt(yi);
1281
+ gsl_vector_set(f, i-binstart, (amp*xi*exp(-xi*xi/var/2.0) - yi)*sqw);
1282
+ }
1283
+ return GSL_SUCCESS;
1284
+ }
1285
+
1286
+ static int Rayleigh_df(const gsl_vector *v, void *params, gsl_matrix *J)
1287
+ {
1288
+ struct fit_histogram *hh;
1289
+ gsl_histogram *h = NULL;
1290
+ double amp, var, xl, xh, xi, yi, y, sqw;
1291
+ size_t i, binstart, binend;
1292
+ hh = (struct fit_histogram *) params;
1293
+ h = hh->h;
1294
+ binstart = hh->binstart;
1295
+ binend = hh->binend;
1296
+ var = gsl_vector_get(v, 0);
1297
+ amp = gsl_vector_get(v, 1);
1298
+ for (i = binstart; i <= binend; i++) {
1299
+ if (gsl_histogram_get_range(h, i, &xl, &xh))
1300
+ rb_raise(rb_eIndexError, "wrong index");
1301
+ xi = (xl + xh)/2.0;
1302
+ yi = h->bin[i];
1303
+ sqw = sqrt(yi);
1304
+ y = xi*exp(-xi*xi/var/2.0);
1305
+ gsl_matrix_set(J, i-binstart, 0, amp*y*xi*xi/2/var/var*sqw);
1306
+ gsl_matrix_set(J, i-binstart, 1, y*sqw);
1307
+ }
1308
+ return GSL_SUCCESS;
1309
+ }
1310
+
1311
+ static int Rayleigh_fdf(const gsl_vector *v, void *params, gsl_vector *f,
1312
+ gsl_matrix *J)
1313
+ {
1314
+ Rayleigh_f(v, params, f);
1315
+ Rayleigh_df(v, params, J);
1316
+ return GSL_SUCCESS;
1317
+ }
1318
+
1319
+
1320
+ static VALUE rb_gsl_histogram_fit_rayleigh(int argc, VALUE *argv, VALUE obj)
1321
+ {
1322
+ gsl_histogram *h = NULL;
1323
+ struct fit_histogram hh;
1324
+ const gsl_multifit_fdfsolver_type *T;
1325
+ gsl_multifit_fdfsolver *s;
1326
+ int status;
1327
+ size_t iter = 0, binstart, binend;
1328
+ size_t n, dof; /* # of data points */
1329
+ size_t p = 2; /* # of fitting parameters */
1330
+ gsl_multifit_function_fdf f;
1331
+ gsl_matrix *covar = NULL;
1332
+ gsl_vector *x = NULL;
1333
+ double sigma, height, errs, errh, chi2;
1334
+ Data_Get_Struct(obj, gsl_histogram, h);
1335
+ binstart = 0;
1336
+ binend = h->n - 1;
1337
+ switch (argc) {
1338
+ case 2:
1339
+ CHECK_FIXNUM(argv[0]); CHECK_FIXNUM(argv[1]);
1340
+ binstart = FIX2INT(argv[0]);
1341
+ binend = FIX2INT(argv[1]);
1342
+ if (binend >= h->n) binend = h->n - 1;
1343
+ break;
1344
+ case 0:
1345
+ break;
1346
+ default:
1347
+ rb_raise(rb_eArgError, "too many arguments (%d for 0 or 2)", argc);
1348
+ break;
1349
+ }
1350
+ x = gsl_vector_alloc(p);
1351
+ gsl_vector_set(x, 0, gsl_pow_2(gsl_histogram_sigma(h))); /* initial values, var = 1 */
1352
+ gsl_vector_set(x, 1, gsl_histogram_max_val(h));
1353
+ hh.h = h;
1354
+ hh.binstart = binstart;
1355
+ hh.binend = binend;
1356
+ n = binend - binstart + 1;
1357
+
1358
+ covar = gsl_matrix_alloc(p, p);
1359
+
1360
+ f.f = Rayleigh_f;
1361
+ f.df = Rayleigh_df;
1362
+ f.fdf = Rayleigh_fdf;
1363
+ f.n = n;
1364
+ f.p = p;
1365
+ f.params = &hh;
1366
+
1367
+ T = gsl_multifit_fdfsolver_lmsder;
1368
+ s = gsl_multifit_fdfsolver_alloc(T, n, p);
1369
+ gsl_multifit_fdfsolver_set(s, &f, x);
1370
+
1371
+ do {
1372
+ iter++;
1373
+ status = gsl_multifit_fdfsolver_iterate(s);
1374
+ if (status) break;
1375
+ status = gsl_multifit_test_delta(s->dx, s->x, 1e-4, 1e-4);
1376
+ } while (status == GSL_CONTINUE);
1377
+ sigma = sqrt(gsl_vector_get(s->x, 0));
1378
+ height = gsl_vector_get(s->x, 1)*sigma*sigma;
1379
+ gsl_multifit_covar(s->J, 0.0, covar);
1380
+ chi2 = gsl_pow_2(gsl_blas_dnrm2(s->f)); /* not reduced chi-square */
1381
+ dof = n - p;
1382
+ errs = sqrt(chi2/dof*gsl_matrix_get(covar, 0, 0))/sigma/2;
1383
+ errh = sqrt(chi2/dof*gsl_matrix_get(covar, 1, 1));
1384
+
1385
+ gsl_multifit_fdfsolver_free(s);
1386
+ gsl_vector_free(x);
1387
+ gsl_matrix_free(covar);
1388
+ return rb_ary_new3(6, rb_float_new(sigma),
1389
+ rb_float_new(height), rb_float_new(errs),
1390
+ rb_float_new(errh),
1391
+ rb_float_new(chi2), INT2FIX(dof));
1392
+ }
1393
+
1394
+ /*
1395
+ * y(x) = Amp*exp(-a*x)
1396
+ */
1397
+ static int xExponential_f(const gsl_vector *v, void *params, gsl_vector *f);
1398
+ static int xExponential_df(const gsl_vector *v, void *params, gsl_matrix * J);
1399
+ static int xExponential_f(const gsl_vector *v, void *params, gsl_vector *f)
1400
+ {
1401
+ struct fit_histogram *hh;
1402
+ gsl_histogram *h = NULL;
1403
+ double amp, b, xl, xh, xi, yi, sqw;
1404
+ size_t i, binstart, binend;
1405
+ hh = (struct fit_histogram *) params;
1406
+ h = hh->h;
1407
+ binstart = hh->binstart;
1408
+ binend = hh->binend;
1409
+ b = gsl_vector_get(v, 0);
1410
+ amp = gsl_vector_get(v, 1);
1411
+ for (i = binstart; i <= binend; i++) {
1412
+ if (gsl_histogram_get_range(h, i, &xl, &xh))
1413
+ rb_raise(rb_eIndexError, "wrong index");
1414
+ xi = (xl + xh)/2.0;
1415
+ yi = h->bin[i];
1416
+ sqw = sqrt(yi);
1417
+ gsl_vector_set(f, i-binstart, (amp*xi*exp(-b*xi) - yi)*sqw);
1418
+ }
1419
+ return GSL_SUCCESS;
1420
+ }
1421
+
1422
+ static int xExponential_df(const gsl_vector *v, void *params, gsl_matrix *J)
1423
+ {
1424
+ struct fit_histogram *hh;
1425
+ gsl_histogram *h = NULL;
1426
+ double amp, b, xl, xh, xi, yi, y, sqw;
1427
+ size_t i, binstart, binend;
1428
+ hh = (struct fit_histogram *) params;
1429
+ h = hh->h;
1430
+ binstart = hh->binstart;
1431
+ binend = hh->binend;
1432
+ b = gsl_vector_get(v, 0);
1433
+ amp = gsl_vector_get(v, 1);
1434
+ for (i = binstart; i <= binend; i++) {
1435
+ if (gsl_histogram_get_range(h, i, &xl, &xh))
1436
+ rb_raise(rb_eIndexError, "wrong index");
1437
+ xi = (xl + xh)/2.0;
1438
+ yi = h->bin[i];
1439
+ sqw = sqrt(yi);
1440
+ y = xi*exp(-b*xi);
1441
+ gsl_matrix_set(J, i-binstart, 0, -amp*y*xi*sqw);
1442
+ gsl_matrix_set(J, i-binstart, 1, y*sqw);
1443
+ }
1444
+ return GSL_SUCCESS;
1445
+ }
1446
+
1447
+ static int xExponential_fdf(const gsl_vector *v, void *params, gsl_vector *f,
1448
+ gsl_matrix *J)
1449
+ {
1450
+ xExponential_f(v, params, f);
1451
+ xExponential_df(v, params, J);
1452
+ return GSL_SUCCESS;
1453
+ }
1454
+
1455
+
1456
+ static VALUE rb_gsl_histogram_fit_xexponential(int argc, VALUE *argv, VALUE obj)
1457
+ {
1458
+ gsl_histogram *h = NULL;
1459
+ struct fit_histogram hh;
1460
+ const gsl_multifit_fdfsolver_type *T;
1461
+ gsl_multifit_fdfsolver *s;
1462
+ int status;
1463
+ size_t iter = 0, binstart, binend;
1464
+ size_t n, dof; /* # of data points */
1465
+ size_t p = 2; /* # of fitting parameters */
1466
+ gsl_multifit_function_fdf f;
1467
+ gsl_matrix *covar = NULL;
1468
+ gsl_vector *x = NULL;
1469
+ double b, height, errs, errh, chi2;
1470
+ Data_Get_Struct(obj, gsl_histogram, h);
1471
+ binstart = 0;
1472
+ binend = h->n - 1;
1473
+ switch (argc) {
1474
+ case 2:
1475
+ CHECK_FIXNUM(argv[0]); CHECK_FIXNUM(argv[1]);
1476
+ binstart = FIX2INT(argv[0]);
1477
+ binend = FIX2INT(argv[1]);
1478
+ if (binend >= h->n) binend = h->n - 1;
1479
+ break;
1480
+ case 0:
1481
+ break;
1482
+ default:
1483
+ rb_raise(rb_eArgError, "too many arguments (%d for 0 or 2)", argc);
1484
+ break;
1485
+ }
1486
+ x = gsl_vector_alloc(p);
1487
+ gsl_vector_set(x, 0, gsl_histogram_sigma(h)); /* initial values, var = 1 */
1488
+ gsl_vector_set(x, 1, gsl_histogram_max_val(h));
1489
+ hh.h = h;
1490
+ hh.binstart = binstart;
1491
+ hh.binend = binend;
1492
+ n = binend - binstart + 1;
1493
+
1494
+ covar = gsl_matrix_alloc(p, p);
1495
+
1496
+ f.f = xExponential_f;
1497
+ f.df = xExponential_df;
1498
+ f.fdf = xExponential_fdf;
1499
+ f.n = n;
1500
+ f.p = p;
1501
+ f.params = &hh;
1502
+
1503
+ T = gsl_multifit_fdfsolver_lmsder;
1504
+ s = gsl_multifit_fdfsolver_alloc(T, n, p);
1505
+ gsl_multifit_fdfsolver_set(s, &f, x);
1506
+
1507
+ do {
1508
+ iter++;
1509
+ status = gsl_multifit_fdfsolver_iterate(s);
1510
+ if (status) break;
1511
+ status = gsl_multifit_test_delta(s->dx, s->x, 1e-4, 1e-4);
1512
+ } while (status == GSL_CONTINUE);
1513
+ b = gsl_vector_get(s->x, 0);
1514
+ height = gsl_vector_get(s->x, 1);
1515
+ gsl_multifit_covar(s->J, 0.0, covar);
1516
+ chi2 = gsl_pow_2(gsl_blas_dnrm2(s->f)); /* not reduced chi-square */
1517
+ dof = n - p;
1518
+ errs = sqrt(chi2/dof*gsl_matrix_get(covar, 0, 0));
1519
+ errh = sqrt(chi2/dof*gsl_matrix_get(covar, 1, 1));
1520
+
1521
+ gsl_multifit_fdfsolver_free(s);
1522
+ gsl_vector_free(x);
1523
+ gsl_matrix_free(covar);
1524
+ return rb_ary_new3(6, rb_float_new(b),
1525
+ rb_float_new(height), rb_float_new(errs),
1526
+ rb_float_new(errh),
1527
+ rb_float_new(chi2), INT2FIX(dof));
1528
+ }
1529
+
1530
+ static VALUE rb_gsl_histogram_fit(int argc, VALUE *argv, VALUE obj)
1531
+ {
1532
+ char fittype[32];
1533
+ if (argc < 1) rb_raise(rb_eArgError, "too few arguments");
1534
+ Check_Type(argv[0], T_STRING);
1535
+ strcpy(fittype, STR2CSTR(argv[0]));
1536
+ if (str_head_grep(fittype, "exp") == 0) {
1537
+ return rb_gsl_histogram_fit_exponential(argc-1, argv+1, obj);
1538
+ } else if (str_head_grep(fittype, "power") == 0) {
1539
+ return rb_gsl_histogram_fit_power(argc-1, argv+1, obj);
1540
+ } else if (str_head_grep(fittype, "gaus") == 0) {
1541
+ return rb_gsl_histogram_fit_gaussian(argc-1, argv+1, obj);
1542
+ } else if (str_head_grep(fittype, "rayleigh") == 0) {
1543
+ return rb_gsl_histogram_fit_rayleigh(argc-1, argv+1, obj);
1544
+ } else if (str_head_grep(fittype, "xexp") == 0) {
1545
+ return rb_gsl_histogram_fit_xexponential(argc-1, argv+1, obj);
1546
+ } else {
1547
+ rb_raise(rb_eRuntimeError,
1548
+ "unknown fitting type %s (exp, power, gaus expected)", fittype);
1549
+ }
1550
+ return Qnil;
1551
+ }
1552
+
1553
+ /* Integrate histogram: the two histograms must have the same range and bins. */
1554
+ void mygsl_histogram_integrate(const gsl_histogram *h, gsl_histogram *hi,
1555
+ size_t istart, size_t iend)
1556
+ {
1557
+ size_t i;
1558
+ if (iend >= istart) {
1559
+ if (istart < 0) istart = 0;
1560
+ if (iend >= h->n) iend = h->n-1;
1561
+ hi->bin[istart] = h->bin[istart];
1562
+ for (i = istart+1; i <= iend; i++) hi->bin[i] = hi->bin[i-1] + h->bin[i];
1563
+ } else {
1564
+ if (istart >= h->n) istart = h->n-1;
1565
+ if (iend < 0) iend = 0;
1566
+ hi->bin[istart] = h->bin[istart];
1567
+ for (i = istart-1; i >= iend; i--) {
1568
+ hi->bin[i] = hi->bin[i+1] + h->bin[i];
1569
+ if (i == 0) break;
1570
+ }
1571
+ }
1572
+ }
1573
+
1574
+ void mygsl_histogram_differentiate(const gsl_histogram *hi, gsl_histogram *h)
1575
+ {
1576
+ size_t i;
1577
+ h->bin[0] = hi->bin[0];
1578
+ for (i = 1; i < hi->n; i++) h->bin[i] = hi->bin[i] - hi->bin[i-1];
1579
+ }
1580
+
1581
+ /* Create a histogram integrating the given histogram h */
1582
+ gsl_histogram* mygsl_histogram_calloc_integrate(const gsl_histogram *h,
1583
+ size_t istart, size_t iend)
1584
+ {
1585
+ gsl_histogram *hi = NULL;
1586
+ hi = gsl_histogram_calloc_range(h->n, h->range);
1587
+ mygsl_histogram_integrate(h, hi, istart, iend);
1588
+ return hi;
1589
+ }
1590
+
1591
+ gsl_histogram* mygsl_histogram_calloc_differentiate(const gsl_histogram *hi)
1592
+ {
1593
+ gsl_histogram *h = NULL;
1594
+ h = gsl_histogram_calloc_range(hi->n, hi->range);
1595
+ mygsl_histogram_differentiate(hi, h);
1596
+ return h;
1597
+ }
1598
+
1599
+ static VALUE rb_gsl_histogram_integrate(int argc, VALUE *argv, VALUE obj)
1600
+ {
1601
+ gsl_histogram *h, *hi;
1602
+ size_t istart, iend;
1603
+ int itmp;
1604
+ Data_Get_Struct(obj, gsl_histogram, h);
1605
+ switch (argc) {
1606
+ case 2:
1607
+ istart = FIX2INT(argv[0]);
1608
+ iend = FIX2INT(argv[1]);
1609
+ break;
1610
+ case 1:
1611
+ switch (TYPE(argv[0])) {
1612
+ case T_ARRAY:
1613
+ istart = FIX2INT(rb_ary_entry(argv[0], 0));
1614
+ iend = FIX2INT(rb_ary_entry(argv[0], 1));
1615
+ break;
1616
+ case T_FIXNUM:
1617
+ itmp = FIX2INT(argv[0]);
1618
+ if (itmp == -1) {
1619
+ istart = h->n - 1;
1620
+ iend = 0;
1621
+ } else {
1622
+ istart = 0;
1623
+ iend = h->n - 1;
1624
+ }
1625
+ break;
1626
+ default:
1627
+ rb_raise(rb_eArgError, "wrong argument type %s (Arran or Fixnum expected)",
1628
+ rb_class2name(CLASS_OF(argv[0])));
1629
+ break;
1630
+ }
1631
+ break;
1632
+ case 0:
1633
+ istart = 0;
1634
+ iend = h->n - 1;
1635
+ break;
1636
+ default:
1637
+ rb_raise(rb_eArgError, "wrong number of arguments (%d for 0-2)", argc);
1638
+ break;
1639
+ }
1640
+ hi = mygsl_histogram_calloc_integrate(h, istart, iend);
1641
+ return Data_Wrap_Struct(cgsl_histogram_integ, 0, gsl_histogram_free, hi);
1642
+ }
1643
+
1644
+ static VALUE rb_gsl_histogram_differentiate(VALUE obj)
1645
+ {
1646
+ gsl_histogram *h, *hi;
1647
+ Data_Get_Struct(obj, gsl_histogram, hi);
1648
+ h = mygsl_histogram_calloc_differentiate(hi);
1649
+ return Data_Wrap_Struct(cgsl_histogram, 0, gsl_histogram_free, h);
1650
+ }
1651
+
1652
+ static gsl_histogram* mygsl_histogram_rebin(const gsl_histogram *h, size_t m)
1653
+ {
1654
+ gsl_histogram *hnew;
1655
+ double w;
1656
+ size_t n, i, j, k;
1657
+ if (m > h->n) m = h->n;
1658
+ n = (size_t) h->n/m;
1659
+ if (n*m != h->n) n += 1;
1660
+ w = (h->range[h->n] - h->range[0])/h->n;
1661
+ hnew = gsl_histogram_alloc(n);
1662
+ for (i = 0, j = 0; i <= n; i++) {
1663
+ if (i*m <= h->n) hnew->range[i] = h->range[i*m];
1664
+ else hnew->range[i] = w*m*i;
1665
+ }
1666
+ for (i = 0, j = 0; i < n; i++) {
1667
+ hnew->bin[i] = 0;
1668
+ for (k = 0; k < m && j < h->n; k++) hnew->bin[i] += h->bin[j++];
1669
+ }
1670
+ return hnew;
1671
+ }
1672
+
1673
+ static VALUE rb_gsl_histogram_rebin(int argc, VALUE *argv, VALUE obj)
1674
+ {
1675
+ gsl_histogram *h, *hnew;
1676
+ size_t m = 2;
1677
+ switch (argc) {
1678
+ case 1:
1679
+ CHECK_FIXNUM(argv[0]);
1680
+ m = (size_t) FIX2INT(argv[0]);
1681
+ break;
1682
+ case 0:
1683
+ m = 2;
1684
+ break;
1685
+ default:
1686
+ rb_raise(rb_eArgError, "wrong number of arguments (%d for 0 or 1)", argc);
1687
+ break;
1688
+ }
1689
+ Data_Get_Struct(obj, gsl_histogram, h);
1690
+ hnew = mygsl_histogram_rebin(h, m);
1691
+ return Data_Wrap_Struct(cgsl_histogram, 0, gsl_histogram_free, hnew);
1692
+ }
1693
+
1694
+ static int mygsl_histogram_fread2(FILE * stream, gsl_histogram * h)
1695
+ {
1696
+ double min, max;
1697
+ int status;
1698
+ status = gsl_block_raw_fread(stream, &min, 1, 1);
1699
+ if (status) return status;
1700
+ status = gsl_block_raw_fread(stream, &max, 1, 1);
1701
+ if (status) return status;
1702
+ gsl_histogram_set_ranges_uniform(h, min, max);
1703
+ status = gsl_block_raw_fread (stream, h->bin, h->n, 1);
1704
+ if (status) return status;
1705
+ return status;
1706
+ }
1707
+
1708
+ static int mygsl_histogram_fwrite2(FILE * stream, const gsl_histogram * h)
1709
+ {
1710
+ int status;
1711
+ status = gsl_block_raw_fwrite (stream, h->range, 1, 1);
1712
+ if (status) return status;
1713
+ status = gsl_block_raw_fwrite (stream, h->range+h->n, 1, 1);
1714
+ if (status) return status;
1715
+ status = gsl_block_raw_fwrite (stream, h->bin, h->n, 1);
1716
+ return status;
1717
+ }
1718
+
1719
+ static VALUE rb_gsl_histogram_fwrite2(VALUE obj, VALUE io)
1720
+ {
1721
+ gsl_histogram *h = NULL;
1722
+ FILE *f;
1723
+ int status, flag = 0;
1724
+ Data_Get_Struct(obj, gsl_histogram, h);
1725
+ f = rb_gsl_open_writefile(io, &flag);
1726
+ status = mygsl_histogram_fwrite2(f, h);
1727
+ if (flag == 1) fclose(f);
1728
+ return INT2FIX(status);
1729
+ }
1730
+
1731
+ static VALUE rb_gsl_histogram_fread2(VALUE obj, VALUE io)
1732
+ {
1733
+ gsl_histogram *h = NULL;
1734
+ FILE *f;
1735
+ int status, flag = 0;
1736
+ Data_Get_Struct(obj, gsl_histogram, h);
1737
+ f = rb_gsl_open_readfile(io, &flag);
1738
+ status = mygsl_histogram_fread2(f, h);
1739
+ if (flag == 1) fclose(f);
1740
+ return INT2FIX(status);
1741
+ }
1742
+
1743
+ static gsl_histogram* mygsl_histogram_calloc_reverse(const gsl_histogram *h)
1744
+ {
1745
+ gsl_histogram *hnew;
1746
+ size_t i, n;
1747
+ hnew = gsl_histogram_alloc(h->n);
1748
+ n = h->n;
1749
+ for (i = 0; i <= n; i++) hnew->range[i] = h->range[n-i];
1750
+ for (i = 0; i < n; i++) hnew->bin[i] = h->bin[n-1-i];
1751
+ return hnew;
1752
+ }
1753
+
1754
+ static VALUE rb_gsl_histogram_reverse(VALUE obj)
1755
+ {
1756
+ gsl_histogram *h, *hnew;
1757
+ Data_Get_Struct(obj, gsl_histogram, h);
1758
+ hnew = mygsl_histogram_calloc_reverse(h);
1759
+ return Data_Wrap_Struct(cgsl_histogram, 0, gsl_histogram_free, hnew);
1760
+ }
1761
+
1762
+ /* The functions below are not included in GSL */
1763
+ /*
1764
+ * Returns an x value at which the histogram integration
1765
+ * reaches the given percentile. The x value is calculated
1766
+ * by an interpolation between the ranges in which the percentile
1767
+ * is found.
1768
+ */
1769
+ static double histogram_percentile(const gsl_histogram *h, double f)
1770
+ {
1771
+ double sum = gsl_histogram_sum(h), sf;
1772
+ double val, s = 0, x;
1773
+ double ri, ri1;
1774
+ size_t i;
1775
+ sf = sum * f;
1776
+ for (i = 0; i < h->n; i++) {
1777
+ val = gsl_histogram_get(h, i);
1778
+ if ((s+val) > sf) break;
1779
+ s += val;
1780
+ }
1781
+ ri = h->range[i];
1782
+ ri1 = h->range[i+1];
1783
+ x = (sf - s)*(ri1 - ri)/val + ri;
1784
+ return x;
1785
+ }
1786
+
1787
+ static double histogram_median(const gsl_histogram *h)
1788
+ {
1789
+ return histogram_percentile(h, 0.5);
1790
+ }
1791
+
1792
+ static VALUE rb_gsl_histogram_percentile(VALUE obj, VALUE f)
1793
+ {
1794
+ gsl_histogram *h;
1795
+ Data_Get_Struct(obj, gsl_histogram, h);
1796
+ return rb_float_new(histogram_percentile(h, NUM2DBL(f)));
1797
+ }
1798
+
1799
+ static VALUE rb_gsl_histogram_median(VALUE obj)
1800
+ {
1801
+ gsl_histogram *h;
1802
+ Data_Get_Struct(obj, gsl_histogram, h);
1803
+ return rb_float_new(histogram_median(h));
1804
+ }
1805
+
1806
+ static double histogram_percentile_inv(const gsl_histogram *h, double x)
1807
+ {
1808
+ double sum = gsl_histogram_sum(h);
1809
+ double val, s = 0;
1810
+ double ri, ri1, q;
1811
+ size_t i;
1812
+
1813
+ for (i = 0; i < h->n; i++) {
1814
+ val = gsl_histogram_get(h, i);
1815
+ if (h->range[i+1] > x) break;
1816
+ s += val;
1817
+ }
1818
+ ri = h->range[i];
1819
+ ri1 = h->range[i+1];
1820
+ q = s + val/(ri1 - ri)*(x - ri);
1821
+ return q/sum;
1822
+ }
1823
+
1824
+ static VALUE rb_gsl_histogram_percentile_inv(VALUE obj, VALUE x)
1825
+ {
1826
+ gsl_histogram *h;
1827
+ Data_Get_Struct(obj, gsl_histogram, h);
1828
+ return rb_float_new(histogram_percentile_inv(h, NUM2DBL(x)));
1829
+ }
1830
+
1831
+ void Init_gsl_histogram(VALUE module)
1832
+ {
1833
+ VALUE cgsl_histogram_pdf;
1834
+
1835
+ cgsl_histogram = rb_define_class_under(module, "Histogram", cGSL_Object);
1836
+ cgsl_histogram_range = rb_define_class_under(cgsl_histogram, "Range",
1837
+ cgsl_vector_view_ro);
1838
+ cgsl_histogram_bin = rb_define_class_under(cgsl_histogram, "Bin",
1839
+ cgsl_vector_view);
1840
+ cgsl_histogram_integ = rb_define_class_under(cgsl_histogram, "Integral",
1841
+ cgsl_histogram);
1842
+
1843
+ #ifdef GSL_0_9_4_LATER
1844
+ rb_define_singleton_method(cgsl_histogram, "alloc", rb_gsl_histogram_alloc, -1);
1845
+ /* rb_define_singleton_method(cgsl_histogram, "new", rb_gsl_histogram_alloc, -1);*/
1846
+ rb_define_singleton_method(cgsl_histogram, "[]", rb_gsl_histogram_alloc, -1);
1847
+
1848
+ rb_define_singleton_method(cgsl_histogram, "alloc_uniform",
1849
+ rb_gsl_histogram_alloc_uniform, -1);
1850
+ rb_define_singleton_method(cgsl_histogram, "new_uniform",
1851
+ rb_gsl_histogram_alloc_uniform, -1);
1852
+
1853
+ rb_define_singleton_method(cgsl_histogram, "alloc_with_min_max_step",
1854
+ rb_gsl_histogram_alloc_with_min_max_step, 3);
1855
+ rb_define_singleton_method(cgsl_histogram, "new_with_min_max_step",
1856
+ rb_gsl_histogram_alloc_with_min_max_step, 3);
1857
+ #endif
1858
+
1859
+ rb_define_singleton_method(cgsl_histogram, "calloc",
1860
+ rb_gsl_histogram_calloc, 1);
1861
+ rb_define_singleton_method(cgsl_histogram, "calloc_range",
1862
+ rb_gsl_histogram_calloc_range, -1);
1863
+
1864
+ rb_define_method(cgsl_histogram, "bins", rb_gsl_histogram_bins, 0);
1865
+ rb_define_alias(cgsl_histogram, "n", "bins");
1866
+ rb_define_alias(cgsl_histogram, "size", "bins");
1867
+ rb_define_method(cgsl_histogram, "set_ranges", rb_gsl_histogram_set_ranges, -1);
1868
+ rb_define_method(cgsl_histogram, "range", rb_gsl_histogram_range, 0);
1869
+ rb_define_method(cgsl_histogram, "bin", rb_gsl_histogram_bin, 0);
1870
+ rb_define_method(cgsl_histogram, "set_ranges_uniform",
1871
+ rb_gsl_histogram_set_ranges_uniform, -1);
1872
+ rb_define_singleton_method(cgsl_histogram, "memcpy", rb_gsl_histogram_memcpy, 2);
1873
+ rb_define_method(cgsl_histogram, "clone", rb_gsl_histogram_clone, 0);
1874
+ rb_define_alias(cgsl_histogram, "duplicate", "clone");
1875
+ rb_define_method(cgsl_histogram, "increment", rb_gsl_histogram_accumulate, -1);
1876
+ rb_define_alias(cgsl_histogram, "fill", "increment");
1877
+ rb_define_alias(cgsl_histogram, "accumulate", "increment");
1878
+ rb_define_method(cgsl_histogram, "increment2", rb_gsl_histogram_accumulate2, -1);
1879
+ rb_define_alias(cgsl_histogram, "accumulate2", "increment2");
1880
+ rb_define_alias(cgsl_histogram, "fill2", "increment2");
1881
+
1882
+ rb_define_method(cgsl_histogram, "get", rb_gsl_histogram_get, 1);
1883
+ rb_define_alias(cgsl_histogram, "[]", "get");
1884
+ rb_define_method(cgsl_histogram, "get_range", rb_gsl_histogram_get_range, 1);
1885
+ rb_define_method(cgsl_histogram, "max", rb_gsl_histogram_max, 0);
1886
+ rb_define_method(cgsl_histogram, "min", rb_gsl_histogram_min, 0);
1887
+ rb_define_method(cgsl_histogram, "reset", rb_gsl_histogram_reset, 0);
1888
+ rb_define_method(cgsl_histogram, "find", rb_gsl_histogram_find, 1);
1889
+ rb_define_method(cgsl_histogram, "max_val", rb_gsl_histogram_max_val, 0);
1890
+ rb_define_method(cgsl_histogram, "max_bin", rb_gsl_histogram_max_bin, 0);
1891
+ rb_define_method(cgsl_histogram, "min_val", rb_gsl_histogram_min_val, 0);
1892
+ rb_define_method(cgsl_histogram, "min_bin", rb_gsl_histogram_min_bin, 0);
1893
+ rb_define_method(cgsl_histogram, "mean", rb_gsl_histogram_mean, 0);
1894
+ rb_define_method(cgsl_histogram, "sigma", rb_gsl_histogram_sigma, 0);
1895
+
1896
+ rb_define_method(cgsl_histogram, "sum", rb_gsl_histogram_integral, -1);
1897
+ rb_define_alias(cgsl_histogram, "integral", "sum");
1898
+
1899
+ rb_define_method(cgsl_histogram, "equal_bins_p",
1900
+ rb_gsl_histogram_equal_bins_p, -1);
1901
+ rb_define_alias(cgsl_histogram, "equal_bins", "equal_bins_p");
1902
+ rb_define_singleton_method(cgsl_histogram, "equal_bins_p",
1903
+ rb_gsl_histogram_equal_bins_p, -1);
1904
+ rb_define_singleton_method(cgsl_histogram, "equal_bins",
1905
+ rb_gsl_histogram_equal_bins_p, -1);
1906
+ rb_define_method(cgsl_histogram, "equal_bins_p?",
1907
+ rb_gsl_histogram_equal_bins_p2, -1);
1908
+ rb_define_alias(cgsl_histogram, "equal_bins?", "equal_bins_p?");
1909
+ rb_define_singleton_method(cgsl_histogram, "equal_bins_p?",
1910
+ rb_gsl_histogram_equal_bins_p2, -1);
1911
+ rb_define_singleton_method(cgsl_histogram, "equal_bins?",
1912
+ rb_gsl_histogram_equal_bins_p2, -1);
1913
+
1914
+ rb_define_method(cgsl_histogram, "add", rb_gsl_histogram_add, 1);
1915
+ rb_define_alias(cgsl_histogram, "+", "add");
1916
+ rb_define_method(cgsl_histogram, "sub", rb_gsl_histogram_sub, 1);
1917
+ rb_define_alias(cgsl_histogram, "-", "sub");
1918
+ rb_define_method(cgsl_histogram, "mul", rb_gsl_histogram_mul, 1);
1919
+ rb_define_alias(cgsl_histogram, "*", "mul");
1920
+ rb_define_method(cgsl_histogram, "div", rb_gsl_histogram_div, 1);
1921
+ rb_define_alias(cgsl_histogram, "/", "div");
1922
+
1923
+ rb_define_method(cgsl_histogram, "add!", rb_gsl_histogram_add2, 1);
1924
+ rb_define_method(cgsl_histogram, "sub!", rb_gsl_histogram_sub2, 1);
1925
+ rb_define_method(cgsl_histogram, "mul!", rb_gsl_histogram_mul2, 1);
1926
+ rb_define_method(cgsl_histogram, "div!", rb_gsl_histogram_div2, 1);
1927
+
1928
+ rb_define_method(cgsl_histogram, "scale!", rb_gsl_histogram_scale_bang, -1);
1929
+ rb_define_method(cgsl_histogram, "scale", rb_gsl_histogram_scale, -1);
1930
+ rb_define_method(cgsl_histogram, "shift!", rb_gsl_histogram_shift, 1);
1931
+ rb_define_method(cgsl_histogram, "shift", rb_gsl_histogram_shift2, 1);
1932
+
1933
+ rb_define_method(cgsl_histogram, "fwrite", rb_gsl_histogram_fwrite, 1);
1934
+ rb_define_method(cgsl_histogram, "fread", rb_gsl_histogram_fread, 1);
1935
+ rb_define_method(cgsl_histogram, "fwrite2", rb_gsl_histogram_fwrite2, 1);
1936
+ rb_define_method(cgsl_histogram, "fread2", rb_gsl_histogram_fread2, 1);
1937
+ rb_define_method(cgsl_histogram, "fprintf", rb_gsl_histogram_fprintf, -1);
1938
+ rb_define_method(cgsl_histogram, "printf", rb_gsl_histogram_printf, -1);
1939
+ rb_define_method(cgsl_histogram, "fscanf", rb_gsl_histogram_fscanf, 1);
1940
+ rb_define_method(cgsl_histogram, "print", rb_gsl_histogram_print, 0);
1941
+
1942
+ cgsl_histogram_pdf = rb_define_class_under(cgsl_histogram, "Pdf", cGSL_Object);
1943
+ rb_define_singleton_method(cgsl_histogram_pdf, "alloc",
1944
+ rb_gsl_histogram_pdf_alloc, 1);
1945
+ /* rb_define_singleton_method(cgsl_histogram_pdf, "new",
1946
+ rb_gsl_histogram_pdf_alloc, 1);*/
1947
+ #ifdef GSL_0_9_4_LATER
1948
+ rb_define_method(cgsl_histogram_pdf, "init", rb_gsl_histogram_pdf_init, 1);
1949
+ #endif
1950
+ rb_define_method(cgsl_histogram_pdf, "sample", rb_gsl_histogram_pdf_sample, 1);
1951
+
1952
+ rb_define_method(cgsl_histogram_pdf, "range", rb_gsl_histogram_pdf_range, 0);
1953
+ rb_define_method(cgsl_histogram_pdf, "sum", rb_gsl_histogram_pdf_sum, 0);
1954
+
1955
+ /*****/
1956
+ rb_define_method(cgsl_histogram, "graph", rb_gsl_histogram_graph, -1);
1957
+ rb_define_alias(cgsl_histogram, "draw", "graph");
1958
+
1959
+ rb_define_method(cgsl_histogram, "plot", rb_gsl_histogram_plot, -1);
1960
+
1961
+ rb_define_method(cgsl_histogram, "fit_gaussian",
1962
+ rb_gsl_histogram_fit_gaussian, -1);
1963
+ rb_define_method(cgsl_histogram, "fit_exponential",
1964
+ rb_gsl_histogram_fit_exponential, -1);
1965
+ rb_define_method(cgsl_histogram, "fit_xexponential",
1966
+ rb_gsl_histogram_fit_xexponential, -1);
1967
+ rb_define_method(cgsl_histogram, "fit_power",
1968
+ rb_gsl_histogram_fit_power, -1);
1969
+ rb_define_method(cgsl_histogram, "fit_rayleigh",
1970
+ rb_gsl_histogram_fit_rayleigh, -1);
1971
+ rb_define_method(cgsl_histogram, "fit",
1972
+ rb_gsl_histogram_fit, -1);
1973
+
1974
+ rb_define_method(cgsl_histogram, "integrate", rb_gsl_histogram_integrate, -1);
1975
+ rb_undef_method(cgsl_histogram_integ, "integrate");
1976
+ rb_define_method(cgsl_histogram_integ, "differentiate",
1977
+ rb_gsl_histogram_differentiate, 0);
1978
+ rb_define_alias(cgsl_histogram_integ, "diff", "differentiate");
1979
+
1980
+ rb_define_method(cgsl_histogram, "normalize", rb_gsl_histogram_normalize, 0);
1981
+ rb_define_method(cgsl_histogram, "normalize!", rb_gsl_histogram_normalize_bang, 0);
1982
+
1983
+ rb_define_method(cgsl_histogram, "rebin", rb_gsl_histogram_rebin, -1);
1984
+ rb_define_alias(cgsl_histogram, "mergebin", "rebin");
1985
+
1986
+ rb_define_method(cgsl_histogram, "reverse", rb_gsl_histogram_reverse, 0);
1987
+
1988
+ rb_define_method(cgsl_histogram, "percentile", rb_gsl_histogram_percentile, 1);
1989
+ rb_define_method(cgsl_histogram, "median", rb_gsl_histogram_median, 0);
1990
+ rb_define_method(cgsl_histogram, "percentile_inv", rb_gsl_histogram_percentile_inv, 1);
1991
+ }