pubannotation_evaluator 1.0.1 → 1.0.2
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checksums.yaml
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@@ -1,7 +1,7 @@
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metadata.gz:
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metadata.gz: 6fa609f2eaa40072aaf68f19d943908cf959c68c951cfabe7c530fae96efdbe8
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data.tar.gz: 66e92d37b5db14676152c17d777ff25071844e3e4297ec8bb5cd4633cc867470
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metadata.gz: ca65f506b81afaa8eb2fc8af8acebda766db0a66ec8d317796df7934ed6f92227ba7364004f6c7bfe507c790c067bea67d4887c7137b2cf980f35fe6efcdca7d
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data.tar.gz: '0607055296bb34c586a7d8c03e91a71d5781a76478ae1673501dc29fe85eeda0f55e6e10584b906d9b2b8268bbf08cefef7815328723dee20cce16c8b5cf912a'
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@@ -315,6 +315,9 @@ class PubannotationEvaluator
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precision = counts[:study].keys.inject({}){|m, k| m.merge(k => counts[:matched_study][k].to_f / counts[:study][k]) if counts[:study][k] > 0}
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recall = counts[:reference].keys.inject({}){|m, k| m.merge(k => counts[:matched_reference][k].to_f / counts[:reference][k]) if counts[:reference][k] > 0}
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precision ||= {}
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recall ||= {}
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keys = (counts[:study].keys + counts[:reference].keys).uniq
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fscore = keys.inject({}) do |m, k|
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_p = precision[k]
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@@ -324,7 +327,7 @@ class PubannotationEvaluator
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else
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_p ? _p : _r
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end
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m.merge(k => _f)
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_f.nil? ? m : m.merge(k => _f)
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end
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metadata
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--- !ruby/object:Gem::Specification
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name: pubannotation_evaluator
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version: !ruby/object:Gem::Version
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version: 1.0.
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version: 1.0.2
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platform: ruby
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authors:
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- Jin-Dong Kim
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autorequire:
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bindir: bin
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cert_chain: []
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date: 2019-04-
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date: 2019-04-30 00:00:00.000000000 Z
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dependencies: []
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description: A tool to evaluate the accuracy of a set of annotations.
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email: jdkim@dbcls.rois.ac.jp
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@@ -40,7 +40,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
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version: '0'
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requirements: []
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rubyforge_project:
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rubygems_version: 2.7.
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rubygems_version: 2.7.9
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signing_key:
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specification_version: 4
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summary: It compares a set of annotations (study annotations) against another set
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