prophet-rb 0.3.2 → 0.4.2

data/lib/prophet/plot.rb

@@ -111,6 +111,61 @@ module Prophet
       artists
     end
 
+    def self.plot_cross_validation_metric(df_cv, metric:, rolling_window: 0.1, ax: nil, figsize: [10, 6], color: "b", point_color: "gray")
+      if ax.nil?
+        fig = plt.figure(facecolor: "w", figsize: figsize)
+        ax = fig.add_subplot(111)
+      else
+        fig = ax.get_figure
+      end
+      # Get the metric at the level of individual predictions, and with the rolling window.
+      df_none = Diagnostics.performance_metrics(df_cv, metrics: [metric], rolling_window: -1)
+      df_h = Diagnostics.performance_metrics(df_cv, metrics: [metric], rolling_window: rolling_window)
+
+      # Some work because matplotlib does not handle timedelta
+      # Target ~10 ticks.
+      tick_w = df_none["horizon"].max * 1e9 / 10.0
+      # Find the largest time resolution that has <1 unit per bin.
+      dts = ["D", "h", "m", "s", "ms", "us", "ns"]
+      dt_names = ["days", "hours", "minutes", "seconds", "milliseconds", "microseconds", "nanoseconds"]
+      dt_conversions = [
+        24 * 60 * 60 * 10 ** 9,
+        60 * 60 * 10 ** 9,
+        60 * 10 ** 9,
+        10 ** 9,
+        10 ** 6,
+        10 ** 3,
+        1.0
+      ]
+      # TODO update
+      i = 0
+      # dts.each_with_index do |dt, i|
+      #   if np.timedelta64(1, dt) < np.timedelta64(tick_w, "ns")
+      #     break
+      #   end
+      # end
+
+      x_plt = df_none["horizon"] * 1e9 / dt_conversions[i].to_f
+      x_plt_h = df_h["horizon"] * 1e9 / dt_conversions[i].to_f
+
+      ax.plot(x_plt.to_a, df_none[metric].to_a, ".", alpha: 0.1, c: point_color)
+      ax.plot(x_plt_h.to_a, df_h[metric].to_a, "-", c: color)
+      ax.grid(true)
+
+      ax.set_xlabel("Horizon (#{dt_names[i]})")
+      ax.set_ylabel(metric)
+      fig
+    end
+
+    def self.plt
+      begin
+        require "matplotlib/pyplot"
+      rescue LoadError
+        raise Error, "Install the matplotlib gem for plots"
+      end
+      Matplotlib::Pyplot
+    end
+
     private
 
     def plot_forecast_component(fcst, name, ax: nil, uncertainty: true, plot_cap: false, figsize: [10, 6])
@@ -128,7 +183,7 @@ module Prophet
         ax.plot(fcst_t, fcst["floor"].to_a, ls: "--", c: "k")
       end
       if uncertainty && @uncertainty_samples
-        artists += [ax.fill_between(fcst_t, fcst[name + "_lower"].to_a, fcst[name + "_upper"].to_a, color: "#0072B2", alpha: 0.2)]
+        artists += [ax.fill_between(fcst_t, fcst["#{name}_lower"].to_a, fcst["#{name}_upper"].to_a, color: "#0072B2", alpha: 0.2)]
       end
       # Specify formatting to workaround matplotlib issue #12925
       locator = dates.AutoDateLocator.new(interval_multiples: false)
@@ -174,7 +229,7 @@ module Prophet
       days = days.map { |v| v.strftime("%A") }
       artists += ax.plot(days.size.times.to_a, seas[name].to_a, ls: "-", c: "#0072B2")
       if uncertainty && @uncertainty_samples
-        artists += [ax.fill_between(days.size.times.to_a, seas[name + "_lower"].to_a, seas[name + "_upper"].to_a, color: "#0072B2", alpha: 0.2)]
+        artists += [ax.fill_between(days.size.times.to_a, seas["#{name}_lower"].to_a, seas["#{name}_upper"].to_a, color: "#0072B2", alpha: 0.2)]
       end
       ax.grid(true, which: "major", c: "gray", ls: "-", lw: 1, alpha: 0.2)
       ax.set_xticks(days.size.times.to_a)
@@ -200,7 +255,7 @@ module Prophet
       seas = predict_seasonal_components(df_y)
       artists += ax.plot(to_pydatetime(df_y["ds"]), seas[name].to_a, ls: "-", c: "#0072B2")
       if uncertainty && @uncertainty_samples
-        artists += [ax.fill_between(to_pydatetime(df_y["ds"]), seas[name + "_lower"].to_a, seas[name + "_upper"].to_a, color: "#0072B2", alpha: 0.2)]
+        artists += [ax.fill_between(to_pydatetime(df_y["ds"]), seas["#{name}_lower"].to_a, seas["#{name}_upper"].to_a, color: "#0072B2", alpha: 0.2)]
       end
       ax.grid(true, which: "major", c: "gray", ls: "-", lw: 1, alpha: 0.2)
       months = dates.MonthLocator.new((1..12).to_a, bymonthday: 1, interval: 2)
@@ -233,7 +288,7 @@ module Prophet
       seas = predict_seasonal_components(df_y)
       artists += ax.plot(to_pydatetime(df_y["ds"]), seas[name].to_a, ls: "-", c: "#0072B2")
       if uncertainty && @uncertainty_samples
-        artists += [ax.fill_between(to_pydatetime(df_y["ds"]), seas[name + "_lower"].to_a, seas[name + "_upper"].to_a, color: "#0072B2", alpha: 0.2)]
+        artists += [ax.fill_between(to_pydatetime(df_y["ds"]), seas["#{name}_lower"].to_a, seas["#{name}_upper"].to_a, color: "#0072B2", alpha: 0.2)]
       end
       ax.grid(true, which: "major", c: "gray", ls: "-", lw: 1, alpha: 0.2)
       step = (finish - start) / (7 - 1).to_f
@@ -263,12 +318,7 @@ module Prophet
     end
 
     def plt
-      begin
-        require "matplotlib/pyplot"
-      rescue LoadError
-        raise Error, "Install the matplotlib gem for plots"
-      end
-      Matplotlib::Pyplot
+      Plot.plt
     end
 
     def dates

data/lib/prophet/stan_backend.rb

@@ -13,6 +13,11 @@ module Prophet
 
     def fit(stan_init, stan_data, **kwargs)
       stan_init, stan_data = prepare_data(stan_init, stan_data)
+
+      if !kwargs[:inits] && kwargs[:init]
+        kwargs[:inits] = prepare_data(kwargs.delete(:init), stan_data)[0]
+      end
+
       kwargs[:algorithm] ||= stan_data["T"] < 100 ? "Newton" : "LBFGS"
       iterations = 10000
 
@@ -49,6 +54,10 @@ module Prophet
     def sampling(stan_init, stan_data, samples, **kwargs)
       stan_init, stan_data = prepare_data(stan_init, stan_data)
 
+      if !kwargs[:inits] && kwargs[:init]
+        kwargs[:inits] = prepare_data(kwargs.delete(:init), stan_data)[0]
+      end
+
       kwargs[:chains] ||= 4
       kwargs[:warmup_iters] ||= samples / 2
 
@@ -128,7 +137,7 @@ module Prophet
       stan_data["t_change"] = stan_data["t_change"].to_a
       stan_data["s_a"] = stan_data["s_a"].to_a
       stan_data["s_m"] = stan_data["s_m"].to_a
-      stan_data["X"] = stan_data["X"].to_numo.to_a
+      stan_data["X"] = stan_data["X"].respond_to?(:to_numo) ? stan_data["X"].to_numo.to_a : stan_data["X"].to_a
       stan_init["delta"] = stan_init["delta"].to_a
       stan_init["beta"] = stan_init["beta"].to_a
       [stan_init, stan_data]

data/lib/prophet/version.rb

@@ -1,3 +1,3 @@
 module Prophet
-  VERSION = "0.3.2"
+  VERSION = "0.4.2"
 end

data/lib/prophet.rb

@@ -8,6 +8,7 @@ require "logger"
 require "set"
 
 # modules
+require "prophet/diagnostics"
 require "prophet/holidays"
 require "prophet/plot"
 require "prophet/forecaster"
@@ -104,4 +105,8 @@ module Prophet
     # filter df["ds"] to ensure dates/times in same format as input
     df["ds"][(df["y"] < forecast["yhat_lower"]) | (df["y"] > forecast["yhat_upper"])].to_a
   end
+
+  def self.from_json(model_json)
+    Forecaster.from_json(model_json)
+  end
 end

data/stan/{unix/prophet.stan → prophet.stan}

@@ -101,8 +101,9 @@ data {
 }
 
 transformed data {
-  matrix[T, S] A;
-  A = get_changepoint_matrix(t, t_change, T, S);
+  matrix[T, S] A = get_changepoint_matrix(t, t_change, T, S);
+  matrix[T, K] X_sa = X .* rep_matrix(s_a', T);
+  matrix[T, K] X_sm = X .* rep_matrix(s_m', T);
 }
 
 parameters {
@@ -133,10 +134,10 @@ model {
   beta ~ normal(0, sigmas);
 
   // Likelihood
-  y ~ normal(
-  trend
-  .* (1 + X * (beta .* s_m))
-  + X * (beta .* s_a),
-  sigma_obs
+  y ~ normal_id_glm(
+    X_sa,
+    trend .* (1 + X_sm * beta),
+    beta,
+    sigma_obs
   );
 }

data/vendor/aarch64-linux/licenses/sundials-license.txt

@@ -1,67 +1,29 @@
-Copyright (c) 2002-2016, Lawrence Livermore National Security. 
-Produced at the Lawrence Livermore National Laboratory.
-Written by A.C. Hindmarsh, D.R. Reynolds, R. Serban, C.S. Woodward,
-S.D. Cohen, A.G. Taylor, S. Peles, L.E. Banks, and D. Shumaker.
-LLNL-CODE-667205    (ARKODE)
-UCRL-CODE-155951    (CVODE)
-UCRL-CODE-155950    (CVODES)
-UCRL-CODE-155952    (IDA)
-UCRL-CODE-237203    (IDAS)
-LLNL-CODE-665877    (KINSOL)
-All rights reserved. 
+BSD 3-Clause License
 
-This file is part of SUNDIALS.  For details, 
-see http://computation.llnl.gov/projects/sundials
+Copyright (c) 2002-2022, Lawrence Livermore National Security and Southern Methodist University.
+All rights reserved.
 
 Redistribution and use in source and binary forms, with or without
-modification, are permitted provided that the following conditions
-are met:
-
-1. Redistributions of source code must retain the above copyright
-notice, this list of conditions and the disclaimer below.
-
-2. Redistributions in binary form must reproduce the above copyright
-notice, this list of conditions and the disclaimer (as noted below)
-in the documentation and/or other materials provided with the
-distribution.
-
-3. Neither the name of the LLNS/LLNL nor the names of its contributors
-may be used to endorse or promote products derived from this software
-without specific prior written permission.
-
-THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS 
-"AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT 
-LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS 
-FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL 
-LAWRENCE LIVERMORE NATIONAL SECURITY, LLC, THE U.S. DEPARTMENT OF 
-ENERGY OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, 
-SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED 
-TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, 
-DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY 
-THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT 
-(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE 
+modification, are permitted provided that the following conditions are met:
+
+* Redistributions of source code must retain the above copyright notice, this
+  list of conditions and the following disclaimer.
+
+* Redistributions in binary form must reproduce the above copyright notice,
+  this list of conditions and the following disclaimer in the documentation
+  and/or other materials provided with the distribution.
+
+* Neither the name of the copyright holder nor the names of its
+  contributors may be used to endorse or promote products derived from
+  this software without specific prior written permission.
+
+THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
+FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
+DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
+SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
+CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
+OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
 OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
-
-Additional BSD Notice
----------------------
-1. This notice is required to be provided under our contract with
-the U.S. Department of Energy (DOE). This work was produced at
-Lawrence Livermore National Laboratory under Contract 
-No. DE-AC52-07NA27344 with the DOE.
-
-2. Neither the United States Government nor Lawrence Livermore 
-National Security, LLC nor any of their employees, makes any warranty, 
-express or implied, or assumes any liability or responsibility for the
-accuracy, completeness, or usefulness of any information, apparatus,
-product, or process disclosed, or represents that its use would not
-infringe privately-owned rights.
-
-3. Also, reference herein to any specific commercial products, process, 
-or services by trade name, trademark, manufacturer or otherwise does 
-not necessarily constitute or imply its endorsement, recommendation, 
-or favoring by the United States Government or Lawrence Livermore 
-National Security, LLC. The views and opinions of authors expressed 
-herein do not necessarily state or reflect those of the United States 
-Government or Lawrence Livermore National Security, LLC, and shall 
-not be used for advertising or product endorsement purposes.
-

data/vendor/aarch64-linux/licenses/sundials-notice.txt

@@ -0,0 +1,21 @@
+This work was produced under the auspices of the U.S. Department of
+Energy by Lawrence Livermore National Laboratory under Contract
+DE-AC52-07NA27344.
+
+This work was prepared as an account of work sponsored by an agency of
+the United States Government. Neither the United States Government nor
+Lawrence Livermore National Security, LLC, nor any of their employees
+makes any warranty, expressed or implied, or assumes any legal liability
+or responsibility for the accuracy, completeness, or usefulness of any
+information, apparatus, product, or process disclosed, or represents that
+its use would not infringe privately owned rights.
+
+Reference herein to any specific commercial product, process, or service
+by trade name, trademark, manufacturer, or otherwise does not necessarily
+constitute or imply its endorsement, recommendation, or favoring by the
+United States Government or Lawrence Livermore National Security, LLC.
+
+The views and opinions of authors expressed herein do not necessarily
+state or reflect those of the United States Government or Lawrence
+Livermore National Security, LLC, and shall not be used for advertising
+or product endorsement purposes.

data/vendor/arm64-darwin/licenses/sundials-license.txt

@@ -1,67 +1,29 @@
-Copyright (c) 2002-2016, Lawrence Livermore National Security. 
-Produced at the Lawrence Livermore National Laboratory.
-Written by A.C. Hindmarsh, D.R. Reynolds, R. Serban, C.S. Woodward,
-S.D. Cohen, A.G. Taylor, S. Peles, L.E. Banks, and D. Shumaker.
-LLNL-CODE-667205    (ARKODE)
-UCRL-CODE-155951    (CVODE)
-UCRL-CODE-155950    (CVODES)
-UCRL-CODE-155952    (IDA)
-UCRL-CODE-237203    (IDAS)
-LLNL-CODE-665877    (KINSOL)
-All rights reserved. 
+BSD 3-Clause License
 
-This file is part of SUNDIALS.  For details, 
-see http://computation.llnl.gov/projects/sundials
+Copyright (c) 2002-2022, Lawrence Livermore National Security and Southern Methodist University.
+All rights reserved.
 
 Redistribution and use in source and binary forms, with or without
-modification, are permitted provided that the following conditions
-are met:
-
-1. Redistributions of source code must retain the above copyright
-notice, this list of conditions and the disclaimer below.
-
-2. Redistributions in binary form must reproduce the above copyright
-notice, this list of conditions and the disclaimer (as noted below)
-in the documentation and/or other materials provided with the
-distribution.
-
-3. Neither the name of the LLNS/LLNL nor the names of its contributors
-may be used to endorse or promote products derived from this software
-without specific prior written permission.
-
-THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS 
-"AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT 
-LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS 
-FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL 
-LAWRENCE LIVERMORE NATIONAL SECURITY, LLC, THE U.S. DEPARTMENT OF 
-ENERGY OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, 
-SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED 
-TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, 
-DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY 
-THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT 
-(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE 
+modification, are permitted provided that the following conditions are met:
+
+* Redistributions of source code must retain the above copyright notice, this
+  list of conditions and the following disclaimer.
+
+* Redistributions in binary form must reproduce the above copyright notice,
+  this list of conditions and the following disclaimer in the documentation
+  and/or other materials provided with the distribution.
+
+* Neither the name of the copyright holder nor the names of its
+  contributors may be used to endorse or promote products derived from
+  this software without specific prior written permission.
+
+THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
+FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
+DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
+SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
+CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
+OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
 OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
-
-Additional BSD Notice
----------------------
-1. This notice is required to be provided under our contract with
-the U.S. Department of Energy (DOE). This work was produced at
-Lawrence Livermore National Laboratory under Contract 
-No. DE-AC52-07NA27344 with the DOE.
-
-2. Neither the United States Government nor Lawrence Livermore 
-National Security, LLC nor any of their employees, makes any warranty, 
-express or implied, or assumes any liability or responsibility for the
-accuracy, completeness, or usefulness of any information, apparatus,
-product, or process disclosed, or represents that its use would not
-infringe privately-owned rights.
-
-3. Also, reference herein to any specific commercial products, process, 
-or services by trade name, trademark, manufacturer or otherwise does 
-not necessarily constitute or imply its endorsement, recommendation, 
-or favoring by the United States Government or Lawrence Livermore 
-National Security, LLC. The views and opinions of authors expressed 
-herein do not necessarily state or reflect those of the United States 
-Government or Lawrence Livermore National Security, LLC, and shall 
-not be used for advertising or product endorsement purposes.
-

data/vendor/arm64-darwin/licenses/sundials-notice.txt

@@ -0,0 +1,21 @@
+This work was produced under the auspices of the U.S. Department of
+Energy by Lawrence Livermore National Laboratory under Contract
+DE-AC52-07NA27344.
+
+This work was prepared as an account of work sponsored by an agency of
+the United States Government. Neither the United States Government nor
+Lawrence Livermore National Security, LLC, nor any of their employees
+makes any warranty, expressed or implied, or assumes any legal liability
+or responsibility for the accuracy, completeness, or usefulness of any
+information, apparatus, product, or process disclosed, or represents that
+its use would not infringe privately owned rights.
+
+Reference herein to any specific commercial product, process, or service
+by trade name, trademark, manufacturer, or otherwise does not necessarily
+constitute or imply its endorsement, recommendation, or favoring by the
+United States Government or Lawrence Livermore National Security, LLC.
+
+The views and opinions of authors expressed herein do not necessarily
+state or reflect those of the United States Government or Lawrence
+Livermore National Security, LLC, and shall not be used for advertising
+or product endorsement purposes.

data/vendor/x86_64-darwin/licenses/sundials-license.txt

@@ -1,67 +1,29 @@
-Copyright (c) 2002-2016, Lawrence Livermore National Security. 
-Produced at the Lawrence Livermore National Laboratory.
-Written by A.C. Hindmarsh, D.R. Reynolds, R. Serban, C.S. Woodward,
-S.D. Cohen, A.G. Taylor, S. Peles, L.E. Banks, and D. Shumaker.
-LLNL-CODE-667205    (ARKODE)
-UCRL-CODE-155951    (CVODE)
-UCRL-CODE-155950    (CVODES)
-UCRL-CODE-155952    (IDA)
-UCRL-CODE-237203    (IDAS)
-LLNL-CODE-665877    (KINSOL)
-All rights reserved. 
+BSD 3-Clause License
 
-This file is part of SUNDIALS.  For details, 
-see http://computation.llnl.gov/projects/sundials
+Copyright (c) 2002-2022, Lawrence Livermore National Security and Southern Methodist University.
+All rights reserved.
 
 Redistribution and use in source and binary forms, with or without
-modification, are permitted provided that the following conditions
-are met:
-
-1. Redistributions of source code must retain the above copyright
-notice, this list of conditions and the disclaimer below.
-
-2. Redistributions in binary form must reproduce the above copyright
-notice, this list of conditions and the disclaimer (as noted below)
-in the documentation and/or other materials provided with the
-distribution.
-
-3. Neither the name of the LLNS/LLNL nor the names of its contributors
-may be used to endorse or promote products derived from this software
-without specific prior written permission.
-
-THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS 
-"AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT 
-LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS 
-FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL 
-LAWRENCE LIVERMORE NATIONAL SECURITY, LLC, THE U.S. DEPARTMENT OF 
-ENERGY OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, 
-SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED 
-TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, 
-DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY 
-THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT 
-(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE 
+modification, are permitted provided that the following conditions are met:
+
+* Redistributions of source code must retain the above copyright notice, this
+  list of conditions and the following disclaimer.
+
+* Redistributions in binary form must reproduce the above copyright notice,
+  this list of conditions and the following disclaimer in the documentation
+  and/or other materials provided with the distribution.
+
+* Neither the name of the copyright holder nor the names of its
+  contributors may be used to endorse or promote products derived from
+  this software without specific prior written permission.
+
+THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
+FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
+DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
+SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
+CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
+OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
 OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
-
-Additional BSD Notice
----------------------
-1. This notice is required to be provided under our contract with
-the U.S. Department of Energy (DOE). This work was produced at
-Lawrence Livermore National Laboratory under Contract 
-No. DE-AC52-07NA27344 with the DOE.
-
-2. Neither the United States Government nor Lawrence Livermore 
-National Security, LLC nor any of their employees, makes any warranty, 
-express or implied, or assumes any liability or responsibility for the
-accuracy, completeness, or usefulness of any information, apparatus,
-product, or process disclosed, or represents that its use would not
-infringe privately-owned rights.
-
-3. Also, reference herein to any specific commercial products, process, 
-or services by trade name, trademark, manufacturer or otherwise does 
-not necessarily constitute or imply its endorsement, recommendation, 
-or favoring by the United States Government or Lawrence Livermore 
-National Security, LLC. The views and opinions of authors expressed 
-herein do not necessarily state or reflect those of the United States 
-Government or Lawrence Livermore National Security, LLC, and shall 
-not be used for advertising or product endorsement purposes.
-

data/vendor/x86_64-darwin/licenses/sundials-notice.txt

@@ -0,0 +1,21 @@
+This work was produced under the auspices of the U.S. Department of
+Energy by Lawrence Livermore National Laboratory under Contract
+DE-AC52-07NA27344.
+
+This work was prepared as an account of work sponsored by an agency of
+the United States Government. Neither the United States Government nor
+Lawrence Livermore National Security, LLC, nor any of their employees
+makes any warranty, expressed or implied, or assumes any legal liability
+or responsibility for the accuracy, completeness, or usefulness of any
+information, apparatus, product, or process disclosed, or represents that
+its use would not infringe privately owned rights.
+
+Reference herein to any specific commercial product, process, or service
+by trade name, trademark, manufacturer, or otherwise does not necessarily
+constitute or imply its endorsement, recommendation, or favoring by the
+United States Government or Lawrence Livermore National Security, LLC.
+
+The views and opinions of authors expressed herein do not necessarily
+state or reflect those of the United States Government or Lawrence
+Livermore National Security, LLC, and shall not be used for advertising
+or product endorsement purposes.