pho 0.7.8 → 0.7.9

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Files changed (60) hide show
  1. data/CHANGES +8 -0
  2. data/Rakefile +4 -2
  3. data/doc/rdoc/classes/Pho.html +4 -0
  4. data/doc/rdoc/classes/Pho/CommandLine.html +114 -114
  5. data/doc/rdoc/classes/Pho/DatatypeProperty.html +12 -12
  6. data/doc/rdoc/classes/Pho/Enrichment/StoreEnricher.html +29 -29
  7. data/doc/rdoc/classes/Pho/Etags.html +36 -36
  8. data/doc/rdoc/classes/Pho/Facet/Results.html +19 -19
  9. data/doc/rdoc/classes/Pho/Facet/Term.html +6 -6
  10. data/doc/rdoc/classes/Pho/FieldPredicateMap.html +102 -102
  11. data/doc/rdoc/classes/Pho/FieldWeighting.html +12 -12
  12. data/doc/rdoc/classes/Pho/FileManagement.html +16 -0
  13. data/doc/rdoc/classes/Pho/FileManagement/AbstractFileManager.html +168 -108
  14. data/doc/rdoc/classes/Pho/FileManagement/BNodeRewritingHandler.html +226 -0
  15. data/doc/rdoc/classes/Pho/FileManagement/FileManager.html +48 -35
  16. data/doc/rdoc/classes/Pho/FileManagement/FileSplitter.html +291 -0
  17. data/doc/rdoc/classes/Pho/FileManagement/RDFManager.html +22 -22
  18. data/doc/rdoc/classes/Pho/FileManagement/StatementHandler.html +152 -0
  19. data/doc/rdoc/classes/Pho/FileManagement/Util.html +212 -0
  20. data/doc/rdoc/classes/Pho/Job.html +64 -64
  21. data/doc/rdoc/classes/Pho/Jobs.html +60 -60
  22. data/doc/rdoc/classes/Pho/OAI/Record.html +6 -6
  23. data/doc/rdoc/classes/Pho/OAI/Records.html +24 -24
  24. data/doc/rdoc/classes/Pho/OAI/Statistics.html +12 -12
  25. data/doc/rdoc/classes/Pho/QueryProfile.html +66 -66
  26. data/doc/rdoc/classes/Pho/ResourceHash/Converter.html +36 -36
  27. data/doc/rdoc/classes/Pho/ResourceHash/SetAlgebra.html +12 -12
  28. data/doc/rdoc/classes/Pho/Snapshot.html +35 -35
  29. data/doc/rdoc/classes/Pho/Sparql/SparqlClient.html +74 -74
  30. data/doc/rdoc/classes/Pho/Sparql/SparqlHelper.html +78 -78
  31. data/doc/rdoc/classes/Pho/Status.html +26 -26
  32. data/doc/rdoc/classes/Pho/Store.html +215 -215
  33. data/doc/rdoc/classes/Pho/StoreSparqlClient.html +12 -12
  34. data/doc/rdoc/classes/Pho/Update/Changeset.html +63 -63
  35. data/doc/rdoc/classes/Pho/Update/ChangesetBuilder.html +24 -24
  36. data/doc/rdoc/classes/Pho/Update/ChangesetHelper.html +6 -6
  37. data/doc/rdoc/classes/Pho/Update/Changesets.html +12 -12
  38. data/doc/rdoc/classes/Pho/Update/LiteralStatement.html +18 -18
  39. data/doc/rdoc/classes/Pho/Update/ResourceStatement.html +24 -24
  40. data/doc/rdoc/classes/Pho/Update/Statement.html +24 -24
  41. data/doc/rdoc/classes/String.html +1 -1
  42. data/doc/rdoc/created.rid +1 -1
  43. data/doc/rdoc/files/CHANGES.html +13 -1
  44. data/doc/rdoc/files/lib/pho/file_management_rb.html +1 -1
  45. data/doc/rdoc/files/lib/pho/file_manager_rb.html +1 -1
  46. data/doc/rdoc/files/lib/pho/rdf_collection_rb.html +1 -1
  47. data/doc/rdoc/files/lib/pho/upload_rb.html +101 -0
  48. data/doc/rdoc/files/lib/pho_rb.html +4 -2
  49. data/doc/rdoc/fr_class_index.html +4 -0
  50. data/doc/rdoc/fr_file_index.html +1 -0
  51. data/doc/rdoc/fr_method_index.html +228 -218
  52. data/lib/pho.rb +4 -1
  53. data/lib/pho/file_management.rb +30 -1
  54. data/lib/pho/file_manager.rb +7 -0
  55. data/lib/pho/rdf_collection.rb +4 -4
  56. data/lib/pho/upload.rb +156 -0
  57. data/tests/tc_bnodehandler.rb +42 -0
  58. data/tests/tc_filesplitter.rb +51 -0
  59. data/tests/ts_pho.rb +3 -1
  60. metadata +56 -8
@@ -82,11 +82,11 @@
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  <div id="description">
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  <p>
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- Provides a simple mechanism for managing a directory of RDF/XML documents
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- and uploading them to platform store.
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+ Provides a simple mechanism for managing a directory of RDF documents and
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+ uploading them to platform store.
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  </p>
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  <p>
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- Allows a collection to be mirrored into the platform
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+ Currently supports RDF, Turtle and NTriples
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  </p>
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  </div>
@@ -98,9 +98,9 @@ Allows a collection to be mirrored into the platform
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  <h3 class="section-bar">Methods</h3>
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  <div class="name-list">
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- <a href="#M000003">list</a>&nbsp;&nbsp;
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- <a href="#M000002">new</a>&nbsp;&nbsp;
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- <a href="#M000004">store_file</a>&nbsp;&nbsp;
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+ <a href="#M000006">list</a>&nbsp;&nbsp;
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+ <a href="#M000005">new</a>&nbsp;&nbsp;
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+ <a href="#M000007">store_file</a>&nbsp;&nbsp;
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  </div>
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  </div>
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@@ -150,19 +150,19 @@ Allows a collection to be mirrored into the platform
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  <div id="methods">
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  <h3 class="section-bar">Public Class methods</h3>
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- <div id="method-M000002" class="method-detail">
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- <a name="M000002"></a>
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+ <div id="method-M000005" class="method-detail">
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+ <a name="M000005"></a>
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  <div class="method-heading">
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- <a href="#M000002" class="method-signature">
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+ <a href="#M000005" class="method-signature">
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  <span class="method-name">new</span><span class="method-args">(store, dir, rdf_suffixes=ALL_RDF, ok_suffix=OK, fail_suffix=FAIL)</span>
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  </a>
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  </div>
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  <div class="method-description">
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- onclick="toggleCode('M000002-source');return false;">[Source]</a></p>
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- <div class="method-source-code" id="M000002-source">
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+ onclick="toggleCode('M000005-source');return false;">[Source]</a></p>
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+ <div class="method-source-code" id="M000005-source">
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  <pre>
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  <span class="ruby-comment cmt"># File lib/pho/rdf_collection.rb, line 17</span>
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  <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">initialize</span>(<span class="ruby-identifier">store</span>, <span class="ruby-identifier">dir</span>, <span class="ruby-identifier">rdf_suffixes</span>=<span class="ruby-constant">ALL_RDF</span>, <span class="ruby-identifier">ok_suffix</span>=<span class="ruby-constant">OK</span>, <span class="ruby-identifier">fail_suffix</span>=<span class="ruby-constant">FAIL</span>)
@@ -176,11 +176,11 @@ Allows a collection to be mirrored into the platform
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  <h3 class="section-bar">Public Instance methods</h3>
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- <div id="method-M000003" class="method-detail">
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- <a name="M000003"></a>
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+ <div id="method-M000006" class="method-detail">
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+ <a name="M000006"></a>
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  <div class="method-heading">
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- <a href="#M000003" class="method-signature">
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+ <a href="#M000006" class="method-signature">
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  <span class="method-name">list</span><span class="method-args">(recursive=false)</span>
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  </a>
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  </div>
@@ -190,8 +190,8 @@ Allows a collection to be mirrored into the platform
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  List files being managed
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  </p>
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  <p><a class="source-toggle" href="#"
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- onclick="toggleCode('M000003-source');return false;">[Source]</a></p>
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- <div class="method-source-code" id="M000003-source">
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+ onclick="toggleCode('M000006-source');return false;">[Source]</a></p>
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+ <div class="method-source-code" id="M000006-source">
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  <pre>
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  <span class="ruby-comment cmt"># File lib/pho/rdf_collection.rb, line 23</span>
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  <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">list</span>(<span class="ruby-identifier">recursive</span>=<span class="ruby-keyword kw">false</span>)
@@ -209,19 +209,19 @@ List files being managed
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  <h3 class="section-bar">Protected Instance methods</h3>
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- <div id="method-M000004" class="method-detail">
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- <a name="M000004"></a>
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+ <div id="method-M000007" class="method-detail">
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+ <a name="M000007"></a>
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  <div class="method-heading">
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- <a href="#M000004" class="method-signature">
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+ <a href="#M000007" class="method-signature">
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  <span class="method-name">store_file</span><span class="method-args">(file, filename)</span>
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  </a>
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  </div>
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  <div class="method-description">
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- onclick="toggleCode('M000004-source');return false;">[Source]</a></p>
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- <div class="method-source-code" id="M000004-source">
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+ onclick="toggleCode('M000007-source');return false;">[Source]</a></p>
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+ <div class="method-source-code" id="M000007-source">
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  <pre>
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  <span class="ruby-comment cmt"># File lib/pho/rdf_collection.rb, line 34</span>
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  <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">store_file</span>(<span class="ruby-identifier">file</span>, <span class="ruby-identifier">filename</span>)
@@ -233,7 +233,7 @@ List files being managed
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  <span class="ruby-keyword kw">else</span>
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  <span class="ruby-identifier">response</span> = <span class="ruby-ivar">@store</span>.<span class="ruby-identifier">store_file</span>(<span class="ruby-identifier">file</span>)
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  <span class="ruby-keyword kw">end</span>
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-
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+ <span class="ruby-identifier">create_tracking_dir</span>(<span class="ruby-identifier">filename</span>)
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  <span class="ruby-keyword kw">if</span> (<span class="ruby-identifier">response</span>.<span class="ruby-identifier">status</span> <span class="ruby-operator">&lt;</span> <span class="ruby-value">300</span> )
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  <span class="ruby-constant">File</span>.<span class="ruby-identifier">open</span>(<span class="ruby-identifier">get_ok_file_for</span>(<span class="ruby-identifier">filename</span>), <span class="ruby-value str">&quot;w&quot;</span>) <span class="ruby-keyword kw">do</span> <span class="ruby-operator">|</span><span class="ruby-identifier">file</span><span class="ruby-operator">|</span>
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  <span class="ruby-identifier">file</span>.<span class="ruby-identifier">print</span>( <span class="ruby-value str">&quot;OK&quot;</span> )
@@ -0,0 +1,152 @@
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+ <?xml version="1.0" encoding="iso-8859-1"?>
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+ <!DOCTYPE html
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+ PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
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+ "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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+
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+ <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
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+ <head>
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+ <title>Class: Pho::FileManagement::StatementHandler</title>
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+ <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
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+ <meta http-equiv="Content-Script-Type" content="text/javascript" />
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+ <link rel="stylesheet" href="../../.././rdoc-style.css" type="text/css" media="screen" />
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+ <script type="text/javascript">
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+ // <![CDATA[
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+
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+ function popupCode( url ) {
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+ window.open(url, "Code", "resizable=yes,scrollbars=yes,toolbar=no,status=no,height=150,width=400")
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+ function toggleCode( id ) {
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+ if ( document.getElementById )
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+ elem = document.getElementById( id );
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+ else if ( document.all )
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+ else
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+ return false;
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+ elemStyle = elem.style;
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+ if ( elemStyle.display != "block" ) {
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+ elemStyle.display = "block"
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+ } else {
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+ elemStyle.display = "none"
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+ }
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+ return true;
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+ }
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+ // Make codeblocks hidden by default
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+ document.writeln( "<style type=\"text/css\">div.method-source-code { display: none }</style>" )
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+ // ]]>
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+ </script>
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+ </head>
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+ <body>
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+ <div id="classHeader">
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+ <table class="header-table">
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+ <tr class="top-aligned-row">
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+ <td><strong>Class</strong></td>
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+ <td class="class-name-in-header">Pho::FileManagement::StatementHandler</td>
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+ </tr>
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+ <tr class="top-aligned-row">
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+ <td><strong>In:</strong></td>
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+ <td>
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+ <a href="../../../files/lib/pho/upload_rb.html">
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+ lib/pho/upload.rb
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+ </a>
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+ <br />
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+ </td>
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+ </tr>
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+
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+ <tr class="top-aligned-row">
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+ <td><strong>Parent:</strong></td>
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+ <td>
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+ Object
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+ </td>
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+ </tr>
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+ </table>
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+ </div>
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+ <!-- banner header -->
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+
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+ <div id="bodyContent">
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+ <div id="contextContent">
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+ <div id="description">
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+ <p>
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+ Default statement handler, does nothing
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+ </p>
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+
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+ </div>
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+
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+
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+ </div>
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+ <div id="method-list">
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+ <h3 class="section-bar">Methods</h3>
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+ <div class="name-list">
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+ <a href="#M000004">handle</a>&nbsp;&nbsp;
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+ </div>
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+ </div>
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+ </div>
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+ <!-- if includes -->
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+ <!-- if method_list -->
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+ <div id="methods">
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+ <h3 class="section-bar">Public Instance methods</h3>
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+
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+ <div id="method-M000004" class="method-detail">
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+ <a name="M000004"></a>
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+
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+ <div class="method-heading">
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+ <a href="#M000004" class="method-signature">
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+ <span class="method-name">handle</span><span class="method-args">(statement)</span>
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+ </a>
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+ </div>
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+
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+ <div class="method-description">
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+ <p><a class="source-toggle" href="#"
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+ onclick="toggleCode('M000004-source');return false;">[Source]</a></p>
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+ <div class="method-source-code" id="M000004-source">
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+ <pre>
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+ <span class="ruby-comment cmt"># File lib/pho/upload.rb, line 7</span>
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+ <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">handle</span>(<span class="ruby-identifier">statement</span>)
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+ <span class="ruby-keyword kw">return</span> <span class="ruby-identifier">statement</span>
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+ <span class="ruby-keyword kw">end</span>
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+ </pre>
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+ </div>
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+ </div>
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+ </div>
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+ </div>
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+ </div>
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+ <div id="validator-badges">
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+ <p><small><a href="http://validator.w3.org/check/referer">[Validate]</a></small></p>
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+ </div>
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+ </html>
@@ -0,0 +1,212 @@
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+ <?xml version="1.0" encoding="iso-8859-1"?>
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+ PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
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+ "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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+
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+ <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
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+ <head>
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+ <title>Class: Pho::FileManagement::Util</title>
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+ <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
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+ <meta http-equiv="Content-Script-Type" content="text/javascript" />
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+ <link rel="stylesheet" href="../../.././rdoc-style.css" type="text/css" media="screen" />
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+ <script type="text/javascript">
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+ // <![CDATA[
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+
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+ function popupCode( url ) {
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+ window.open(url, "Code", "resizable=yes,scrollbars=yes,toolbar=no,status=no,height=150,width=400")
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+ }
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+
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+ function toggleCode( id ) {
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+ if ( document.getElementById )
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+ elem = document.getElementById( id );
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+ else if ( document.all )
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+ elem = eval( "document.all." + id );
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+ else
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+ return false;
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+ elemStyle = elem.style;
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+
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+ if ( elemStyle.display != "block" ) {
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+ elemStyle.display = "block"
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+ } else {
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+ elemStyle.display = "none"
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+ }
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+
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+ return true;
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+ }
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+
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+ // Make codeblocks hidden by default
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+ document.writeln( "<style type=\"text/css\">div.method-source-code { display: none }</style>" )
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+
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+ // ]]>
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+ </script>
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+
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+ </head>
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+ <body>
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+
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+
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+ <div id="classHeader">
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+ <table class="header-table">
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+ <tr class="top-aligned-row">
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+ <td><strong>Class</strong></td>
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+ <td class="class-name-in-header">Pho::FileManagement::Util</td>
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+ </tr>
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+ <tr class="top-aligned-row">
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+ <td><strong>In:</strong></td>
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+ <td>
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+ <a href="../../../files/lib/pho/upload_rb.html">
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+ lib/pho/upload.rb
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+ </a>
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+ <br />
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+ </td>
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+ </tr>
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+
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+ <tr class="top-aligned-row">
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+ <td><strong>Parent:</strong></td>
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+ <td>
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+ Object
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+ </td>
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+ </tr>
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+ </table>
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+ </div>
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+ <!-- banner header -->
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+ <div id="contextContent">
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+ <div id="method-list">
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+ <a href="#M000003">prepare_and_store_upload</a>&nbsp;&nbsp;
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+ <a href="#M000002">prepare_platform_upload</a>&nbsp;&nbsp;
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+ </div>
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+ </div>
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+ <!-- if method_list -->
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+ <div id="methods">
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+ <span class="method-name">prepare_and_store_upload</span><span class="method-args">(store, src_dir, collection_dir, triples=FileSplitter::DEFAULT_CHUNK_SIZE)</span>
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+ <p>
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+ Prepares a batch of files for uploading into the platform, then posts that
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+ </p>
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+ <p>
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+ Returns an <a href="RDFManager.html">RDFManager</a> instance that can be
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+ </p>
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+ <p><a class="source-toggle" href="#"
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+ onclick="toggleCode('M000003-source');return false;">[Source]</a></p>
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+ <div class="method-source-code" id="M000003-source">
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+ <pre>
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+ <span class="ruby-comment cmt"># File lib/pho/upload.rb, line 145</span>
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+ <span class="ruby-keyword kw">def</span> <span class="ruby-constant">Util</span>.<span class="ruby-identifier">prepare_and_store_upload</span>(<span class="ruby-identifier">store</span>, <span class="ruby-identifier">src_dir</span>, <span class="ruby-identifier">collection_dir</span>,
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+ <span class="ruby-identifier">triples</span>=<span class="ruby-constant">FileSplitter</span><span class="ruby-operator">::</span><span class="ruby-constant">DEFAULT_CHUNK_SIZE</span>)
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+
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+ <span class="ruby-identifier">collection</span> = <span class="ruby-constant">Pho</span><span class="ruby-operator">::</span><span class="ruby-constant">FileManagement</span><span class="ruby-operator">::</span><span class="ruby-constant">RDFManager</span>.<span class="ruby-identifier">new</span>(<span class="ruby-identifier">store</span>, <span class="ruby-identifier">collection_dir</span>)
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+ <span class="ruby-identifier">collection</span>.<span class="ruby-identifier">store</span>()
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+ <span class="ruby-keyword kw">return</span> <span class="ruby-identifier">collection</span>
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+ <span class="ruby-keyword kw">end</span>
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+ </pre>
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+ </div>
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+ </div>
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+ </div>
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+
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+ <div id="method-M000002" class="method-detail">
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+ <a name="M000002"></a>
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+
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+ <div class="method-heading">
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+ <a href="#M000002" class="method-signature">
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+ <span class="method-name">prepare_platform_upload</span><span class="method-args">(store, src_dir, collection_dir, triples=FileSplitter::DEFAULT_CHUNK_SIZE)</span>
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+ </a>
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+ </div>
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+
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+ <div class="method-description">
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+ <p>
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+ Take a directory of files, copy them to temporary directory, splitting
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+ where necessary, in preparation for uploading to a platform store.
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+ </p>
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+ <p>
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+ Source directory is scanned for ntriple, turtle and RDF/XML files. All of
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+ these are automatically chunked into 10,000 triple chunks and re-serialized
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+ as ntriples
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+ </p>
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+ <p>
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+ BNodes are automatically re-written to full uris.
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+ </p>
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+ <pre>
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+ store:: Pho::Store into which data will be posted. Used to normalizing bnodes
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+ src_dir:: directory containing source data.
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+ </pre>
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+ <p><a class="source-toggle" href="#"
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+ onclick="toggleCode('M000002-source');return false;">[Source]</a></p>
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+ <div class="method-source-code" id="M000002-source">
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+ <pre>
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+ <span class="ruby-comment cmt"># File lib/pho/upload.rb, line 124</span>
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+ <span class="ruby-keyword kw">def</span> <span class="ruby-constant">Util</span>.<span class="ruby-identifier">prepare_platform_upload</span>(<span class="ruby-identifier">store</span>, <span class="ruby-identifier">src_dir</span>, <span class="ruby-identifier">collection_dir</span>,
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+ <span class="ruby-identifier">triples</span>=<span class="ruby-constant">FileSplitter</span><span class="ruby-operator">::</span><span class="ruby-constant">DEFAULT_CHUNK_SIZE</span>)
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+
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+ <span class="ruby-identifier">handler</span> = <span class="ruby-constant">BNodeRewritingHandler</span>.<span class="ruby-identifier">new</span>( <span class="ruby-identifier">store</span>.<span class="ruby-identifier">build_uri</span>(<span class="ruby-value str">&quot;/items&quot;</span>) )
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+ <span class="ruby-identifier">splitter</span> = <span class="ruby-constant">FileSplitter</span>.<span class="ruby-identifier">new</span>(<span class="ruby-identifier">collection_dir</span>, <span class="ruby-identifier">triples</span>, <span class="ruby-identifier">handler</span> )
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+
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+ <span class="ruby-identifier">formats</span> = [ [<span class="ruby-value str">&quot;*.rdf&quot;</span>, <span class="ruby-identifier">:rdfxml</span>], [<span class="ruby-value str">&quot;*.nt&quot;</span>, <span class="ruby-identifier">:ntriples</span>], [<span class="ruby-value str">&quot;*.ttl&quot;</span>, <span class="ruby-identifier">:turtle</span>] ]
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+ <span class="ruby-identifier">formats</span>.<span class="ruby-identifier">each</span> <span class="ruby-keyword kw">do</span> <span class="ruby-operator">|</span><span class="ruby-identifier">format</span><span class="ruby-operator">|</span>
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+
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+ <span class="ruby-identifier">files</span> = <span class="ruby-constant">Dir</span>.<span class="ruby-identifier">glob</span>( <span class="ruby-constant">File</span>.<span class="ruby-identifier">join</span>(<span class="ruby-identifier">src_dir</span>, <span class="ruby-identifier">format</span>[<span class="ruby-value">0</span>] ) )
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+ <span class="ruby-identifier">splitter</span>.<span class="ruby-identifier">split_files</span>(<span class="ruby-identifier">files</span>, <span class="ruby-identifier">format</span>[<span class="ruby-value">1</span>] )
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+
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+ <span class="ruby-keyword kw">end</span>
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+ <span class="ruby-keyword kw">return</span> <span class="ruby-keyword kw">true</span>
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+
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+ <span class="ruby-keyword kw">end</span>
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+ </pre>
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+ </div>
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+ </div>
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+ </div>
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+
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+
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+ </div>
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+
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+
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+ </div>
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+
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+
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+ <div id="validator-badges">
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+ <p><small><a href="http://validator.w3.org/check/referer">[Validate]</a></small></p>
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+ </div>
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+
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+ </body>
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+ </html>