pho 0.7.8 → 0.7.9

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (60) hide show
  1. data/CHANGES +8 -0
  2. data/Rakefile +4 -2
  3. data/doc/rdoc/classes/Pho.html +4 -0
  4. data/doc/rdoc/classes/Pho/CommandLine.html +114 -114
  5. data/doc/rdoc/classes/Pho/DatatypeProperty.html +12 -12
  6. data/doc/rdoc/classes/Pho/Enrichment/StoreEnricher.html +29 -29
  7. data/doc/rdoc/classes/Pho/Etags.html +36 -36
  8. data/doc/rdoc/classes/Pho/Facet/Results.html +19 -19
  9. data/doc/rdoc/classes/Pho/Facet/Term.html +6 -6
  10. data/doc/rdoc/classes/Pho/FieldPredicateMap.html +102 -102
  11. data/doc/rdoc/classes/Pho/FieldWeighting.html +12 -12
  12. data/doc/rdoc/classes/Pho/FileManagement.html +16 -0
  13. data/doc/rdoc/classes/Pho/FileManagement/AbstractFileManager.html +168 -108
  14. data/doc/rdoc/classes/Pho/FileManagement/BNodeRewritingHandler.html +226 -0
  15. data/doc/rdoc/classes/Pho/FileManagement/FileManager.html +48 -35
  16. data/doc/rdoc/classes/Pho/FileManagement/FileSplitter.html +291 -0
  17. data/doc/rdoc/classes/Pho/FileManagement/RDFManager.html +22 -22
  18. data/doc/rdoc/classes/Pho/FileManagement/StatementHandler.html +152 -0
  19. data/doc/rdoc/classes/Pho/FileManagement/Util.html +212 -0
  20. data/doc/rdoc/classes/Pho/Job.html +64 -64
  21. data/doc/rdoc/classes/Pho/Jobs.html +60 -60
  22. data/doc/rdoc/classes/Pho/OAI/Record.html +6 -6
  23. data/doc/rdoc/classes/Pho/OAI/Records.html +24 -24
  24. data/doc/rdoc/classes/Pho/OAI/Statistics.html +12 -12
  25. data/doc/rdoc/classes/Pho/QueryProfile.html +66 -66
  26. data/doc/rdoc/classes/Pho/ResourceHash/Converter.html +36 -36
  27. data/doc/rdoc/classes/Pho/ResourceHash/SetAlgebra.html +12 -12
  28. data/doc/rdoc/classes/Pho/Snapshot.html +35 -35
  29. data/doc/rdoc/classes/Pho/Sparql/SparqlClient.html +74 -74
  30. data/doc/rdoc/classes/Pho/Sparql/SparqlHelper.html +78 -78
  31. data/doc/rdoc/classes/Pho/Status.html +26 -26
  32. data/doc/rdoc/classes/Pho/Store.html +215 -215
  33. data/doc/rdoc/classes/Pho/StoreSparqlClient.html +12 -12
  34. data/doc/rdoc/classes/Pho/Update/Changeset.html +63 -63
  35. data/doc/rdoc/classes/Pho/Update/ChangesetBuilder.html +24 -24
  36. data/doc/rdoc/classes/Pho/Update/ChangesetHelper.html +6 -6
  37. data/doc/rdoc/classes/Pho/Update/Changesets.html +12 -12
  38. data/doc/rdoc/classes/Pho/Update/LiteralStatement.html +18 -18
  39. data/doc/rdoc/classes/Pho/Update/ResourceStatement.html +24 -24
  40. data/doc/rdoc/classes/Pho/Update/Statement.html +24 -24
  41. data/doc/rdoc/classes/String.html +1 -1
  42. data/doc/rdoc/created.rid +1 -1
  43. data/doc/rdoc/files/CHANGES.html +13 -1
  44. data/doc/rdoc/files/lib/pho/file_management_rb.html +1 -1
  45. data/doc/rdoc/files/lib/pho/file_manager_rb.html +1 -1
  46. data/doc/rdoc/files/lib/pho/rdf_collection_rb.html +1 -1
  47. data/doc/rdoc/files/lib/pho/upload_rb.html +101 -0
  48. data/doc/rdoc/files/lib/pho_rb.html +4 -2
  49. data/doc/rdoc/fr_class_index.html +4 -0
  50. data/doc/rdoc/fr_file_index.html +1 -0
  51. data/doc/rdoc/fr_method_index.html +228 -218
  52. data/lib/pho.rb +4 -1
  53. data/lib/pho/file_management.rb +30 -1
  54. data/lib/pho/file_manager.rb +7 -0
  55. data/lib/pho/rdf_collection.rb +4 -4
  56. data/lib/pho/upload.rb +156 -0
  57. data/tests/tc_bnodehandler.rb +42 -0
  58. data/tests/tc_filesplitter.rb +51 -0
  59. data/tests/ts_pho.rb +3 -1
  60. metadata +56 -8
@@ -82,11 +82,11 @@
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  <div id="description">
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  <p>
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- Provides a simple mechanism for managing a directory of RDF/XML documents
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- and uploading them to platform store.
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+ Provides a simple mechanism for managing a directory of RDF documents and
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+ uploading them to platform store.
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  </p>
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  <p>
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- Allows a collection to be mirrored into the platform
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+ Currently supports RDF, Turtle and NTriples
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  </p>
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  </div>
@@ -98,9 +98,9 @@ Allows a collection to be mirrored into the platform
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  <h3 class="section-bar">Methods</h3>
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  <div class="name-list">
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- <a href="#M000003">list</a>&nbsp;&nbsp;
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- <a href="#M000002">new</a>&nbsp;&nbsp;
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- <a href="#M000004">store_file</a>&nbsp;&nbsp;
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+ <a href="#M000006">list</a>&nbsp;&nbsp;
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+ <a href="#M000005">new</a>&nbsp;&nbsp;
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+ <a href="#M000007">store_file</a>&nbsp;&nbsp;
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  </div>
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  </div>
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@@ -150,19 +150,19 @@ Allows a collection to be mirrored into the platform
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  <div id="methods">
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  <h3 class="section-bar">Public Class methods</h3>
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- <div id="method-M000002" class="method-detail">
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- <a name="M000002"></a>
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+ <div id="method-M000005" class="method-detail">
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+ <a name="M000005"></a>
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  <div class="method-heading">
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- <a href="#M000002" class="method-signature">
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+ <a href="#M000005" class="method-signature">
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  <span class="method-name">new</span><span class="method-args">(store, dir, rdf_suffixes=ALL_RDF, ok_suffix=OK, fail_suffix=FAIL)</span>
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  </a>
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  </div>
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  <div class="method-description">
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  <p><a class="source-toggle" href="#"
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- onclick="toggleCode('M000002-source');return false;">[Source]</a></p>
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- <div class="method-source-code" id="M000002-source">
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+ onclick="toggleCode('M000005-source');return false;">[Source]</a></p>
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+ <div class="method-source-code" id="M000005-source">
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  <pre>
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  <span class="ruby-comment cmt"># File lib/pho/rdf_collection.rb, line 17</span>
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  <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">initialize</span>(<span class="ruby-identifier">store</span>, <span class="ruby-identifier">dir</span>, <span class="ruby-identifier">rdf_suffixes</span>=<span class="ruby-constant">ALL_RDF</span>, <span class="ruby-identifier">ok_suffix</span>=<span class="ruby-constant">OK</span>, <span class="ruby-identifier">fail_suffix</span>=<span class="ruby-constant">FAIL</span>)
@@ -176,11 +176,11 @@ Allows a collection to be mirrored into the platform
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  <h3 class="section-bar">Public Instance methods</h3>
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- <div id="method-M000003" class="method-detail">
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- <a name="M000003"></a>
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+ <div id="method-M000006" class="method-detail">
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+ <a name="M000006"></a>
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  <div class="method-heading">
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- <a href="#M000003" class="method-signature">
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+ <a href="#M000006" class="method-signature">
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  <span class="method-name">list</span><span class="method-args">(recursive=false)</span>
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  </a>
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  </div>
@@ -190,8 +190,8 @@ Allows a collection to be mirrored into the platform
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  List files being managed
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  </p>
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  <p><a class="source-toggle" href="#"
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- onclick="toggleCode('M000003-source');return false;">[Source]</a></p>
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- <div class="method-source-code" id="M000003-source">
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+ onclick="toggleCode('M000006-source');return false;">[Source]</a></p>
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+ <div class="method-source-code" id="M000006-source">
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  <pre>
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  <span class="ruby-comment cmt"># File lib/pho/rdf_collection.rb, line 23</span>
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  <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">list</span>(<span class="ruby-identifier">recursive</span>=<span class="ruby-keyword kw">false</span>)
@@ -209,19 +209,19 @@ List files being managed
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  <h3 class="section-bar">Protected Instance methods</h3>
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- <div id="method-M000004" class="method-detail">
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- <a name="M000004"></a>
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+ <div id="method-M000007" class="method-detail">
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+ <a name="M000007"></a>
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  <div class="method-heading">
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- <a href="#M000004" class="method-signature">
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+ <a href="#M000007" class="method-signature">
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  <span class="method-name">store_file</span><span class="method-args">(file, filename)</span>
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  </a>
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  </div>
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  <div class="method-description">
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  <p><a class="source-toggle" href="#"
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- onclick="toggleCode('M000004-source');return false;">[Source]</a></p>
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- <div class="method-source-code" id="M000004-source">
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+ onclick="toggleCode('M000007-source');return false;">[Source]</a></p>
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+ <div class="method-source-code" id="M000007-source">
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  <pre>
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  <span class="ruby-comment cmt"># File lib/pho/rdf_collection.rb, line 34</span>
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  <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">store_file</span>(<span class="ruby-identifier">file</span>, <span class="ruby-identifier">filename</span>)
@@ -233,7 +233,7 @@ List files being managed
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  <span class="ruby-keyword kw">else</span>
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  <span class="ruby-identifier">response</span> = <span class="ruby-ivar">@store</span>.<span class="ruby-identifier">store_file</span>(<span class="ruby-identifier">file</span>)
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  <span class="ruby-keyword kw">end</span>
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-
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+ <span class="ruby-identifier">create_tracking_dir</span>(<span class="ruby-identifier">filename</span>)
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  <span class="ruby-keyword kw">if</span> (<span class="ruby-identifier">response</span>.<span class="ruby-identifier">status</span> <span class="ruby-operator">&lt;</span> <span class="ruby-value">300</span> )
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  <span class="ruby-constant">File</span>.<span class="ruby-identifier">open</span>(<span class="ruby-identifier">get_ok_file_for</span>(<span class="ruby-identifier">filename</span>), <span class="ruby-value str">&quot;w&quot;</span>) <span class="ruby-keyword kw">do</span> <span class="ruby-operator">|</span><span class="ruby-identifier">file</span><span class="ruby-operator">|</span>
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  <span class="ruby-identifier">file</span>.<span class="ruby-identifier">print</span>( <span class="ruby-value str">&quot;OK&quot;</span> )
@@ -0,0 +1,152 @@
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+ <?xml version="1.0" encoding="iso-8859-1"?>
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+ <!DOCTYPE html
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+ PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
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+ "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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+
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+ <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
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+ <head>
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+ <title>Class: Pho::FileManagement::StatementHandler</title>
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+ <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
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+ <meta http-equiv="Content-Script-Type" content="text/javascript" />
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+ <link rel="stylesheet" href="../../.././rdoc-style.css" type="text/css" media="screen" />
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+ <script type="text/javascript">
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+ // <![CDATA[
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+
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+ function popupCode( url ) {
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+ window.open(url, "Code", "resizable=yes,scrollbars=yes,toolbar=no,status=no,height=150,width=400")
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+ }
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+
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+ function toggleCode( id ) {
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+ if ( document.getElementById )
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+ elem = document.getElementById( id );
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+ else if ( document.all )
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+ elem = eval( "document.all." + id );
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+ else
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+ return false;
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+ elemStyle = elem.style;
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+
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+ if ( elemStyle.display != "block" ) {
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+ elemStyle.display = "block"
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+ } else {
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+ elemStyle.display = "none"
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+ }
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+
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+ return true;
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+ }
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+
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+ // Make codeblocks hidden by default
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+ document.writeln( "<style type=\"text/css\">div.method-source-code { display: none }</style>" )
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+
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+ // ]]>
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+ </script>
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+
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+ </head>
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+ <body>
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+
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+ <div id="classHeader">
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+ <table class="header-table">
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+ <tr class="top-aligned-row">
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+ <td><strong>Class</strong></td>
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+ <td class="class-name-in-header">Pho::FileManagement::StatementHandler</td>
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+ </tr>
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+ <tr class="top-aligned-row">
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+ <td><strong>In:</strong></td>
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+ <td>
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+ <a href="../../../files/lib/pho/upload_rb.html">
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+ lib/pho/upload.rb
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+ </a>
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+ <br />
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+ </td>
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+ </tr>
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+
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+ <tr class="top-aligned-row">
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+ <td><strong>Parent:</strong></td>
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+ <td>
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+ Object
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+ </td>
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+ </tr>
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+ </table>
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+ </div>
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+ <!-- banner header -->
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+
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+ <div id="bodyContent">
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+ <div id="contextContent">
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+ <div id="description">
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+ <p>
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+ Default statement handler, does nothing
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+ </p>
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+
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+ </div>
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+
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+
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+ </div>
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+
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+ <div id="method-list">
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+ <h3 class="section-bar">Methods</h3>
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+
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+ <div class="name-list">
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+ <a href="#M000004">handle</a>&nbsp;&nbsp;
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+ </div>
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+ </div>
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+ </div>
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+
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+ <!-- if includes -->
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+ <!-- if method_list -->
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+ <div id="methods">
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+ <h3 class="section-bar">Public Instance methods</h3>
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+
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+ <div id="method-M000004" class="method-detail">
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+ <a name="M000004"></a>
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+
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+ <div class="method-heading">
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+ <a href="#M000004" class="method-signature">
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+ <span class="method-name">handle</span><span class="method-args">(statement)</span>
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+ </a>
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+ </div>
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+
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+ <div class="method-description">
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+ <p><a class="source-toggle" href="#"
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+ onclick="toggleCode('M000004-source');return false;">[Source]</a></p>
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+ <div class="method-source-code" id="M000004-source">
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+ <pre>
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+ <span class="ruby-comment cmt"># File lib/pho/upload.rb, line 7</span>
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+ <span class="ruby-keyword kw">def</span> <span class="ruby-identifier">handle</span>(<span class="ruby-identifier">statement</span>)
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+ <span class="ruby-keyword kw">return</span> <span class="ruby-identifier">statement</span>
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+ <span class="ruby-keyword kw">end</span>
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+ </pre>
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+ </div>
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+ </div>
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+ </div>
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+ </div>
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+ </div>
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+ <div id="validator-badges">
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+ <p><small><a href="http://validator.w3.org/check/referer">[Validate]</a></small></p>
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+ </div>
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+
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+ </body>
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+ </html>
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+ <?xml version="1.0" encoding="iso-8859-1"?>
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+ <!DOCTYPE html
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+ PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
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+ "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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+
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+ <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
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+ <head>
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+ <title>Class: Pho::FileManagement::Util</title>
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+ <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
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+ <meta http-equiv="Content-Script-Type" content="text/javascript" />
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+ <link rel="stylesheet" href="../../.././rdoc-style.css" type="text/css" media="screen" />
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+ <script type="text/javascript">
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+ // <![CDATA[
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+
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+ function popupCode( url ) {
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+ window.open(url, "Code", "resizable=yes,scrollbars=yes,toolbar=no,status=no,height=150,width=400")
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+ }
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+
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+ function toggleCode( id ) {
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+ if ( document.getElementById )
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+ elem = document.getElementById( id );
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+ else if ( document.all )
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+ elem = eval( "document.all." + id );
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+ else
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+ return false;
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+
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+ elemStyle = elem.style;
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+
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+ if ( elemStyle.display != "block" ) {
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+ elemStyle.display = "block"
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+ } else {
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+ elemStyle.display = "none"
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+ }
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+
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+ return true;
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+ }
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+
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+ // Make codeblocks hidden by default
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+ document.writeln( "<style type=\"text/css\">div.method-source-code { display: none }</style>" )
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+
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+ // ]]>
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+ </script>
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+
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+ </head>
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+ <body>
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+
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+
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+
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+ <div id="classHeader">
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+ <table class="header-table">
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+ <tr class="top-aligned-row">
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+ <td><strong>Class</strong></td>
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+ <td class="class-name-in-header">Pho::FileManagement::Util</td>
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+ </tr>
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+ <tr class="top-aligned-row">
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+ <td><strong>In:</strong></td>
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+ <td>
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+ <a href="../../../files/lib/pho/upload_rb.html">
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+ lib/pho/upload.rb
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+ </a>
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+ <br />
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+ </td>
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+ </tr>
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+
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+ <tr class="top-aligned-row">
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+ <td><strong>Parent:</strong></td>
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+ <td>
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+ Object
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+ </td>
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+ </tr>
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+ </table>
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+ </div>
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+ <!-- banner header -->
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+ <div id="bodyContent">
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+
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+ <div id="contextContent">
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+
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+ </div>
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+ <div id="method-list">
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+ <a href="#M000003">prepare_and_store_upload</a>&nbsp;&nbsp;
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+ <a href="#M000002">prepare_platform_upload</a>&nbsp;&nbsp;
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+ </div>
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+ </div>
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+ </div>
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+
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+ <!-- if method_list -->
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+ <div id="methods">
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+ <h3 class="section-bar">Public Class methods</h3>
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+ <div id="method-M000003" class="method-detail">
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+ <a name="M000003"></a>
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+ <span class="method-name">prepare_and_store_upload</span><span class="method-args">(store, src_dir, collection_dir, triples=FileSplitter::DEFAULT_CHUNK_SIZE)</span>
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+ </a>
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+ </div>
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+ <div class="method-description">
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+ <p>
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+ Prepares a batch of files for uploading into the platform, then posts that
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+ collection to the designated store
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+ </p>
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+ <p>
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+ Returns an <a href="RDFManager.html">RDFManager</a> instance that can be
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+ inspected to check for successes
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+ </p>
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+ <p><a class="source-toggle" href="#"
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+ onclick="toggleCode('M000003-source');return false;">[Source]</a></p>
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+ <div class="method-source-code" id="M000003-source">
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+ <pre>
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+ <span class="ruby-comment cmt"># File lib/pho/upload.rb, line 145</span>
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+ <span class="ruby-keyword kw">def</span> <span class="ruby-constant">Util</span>.<span class="ruby-identifier">prepare_and_store_upload</span>(<span class="ruby-identifier">store</span>, <span class="ruby-identifier">src_dir</span>, <span class="ruby-identifier">collection_dir</span>,
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+ <span class="ruby-identifier">triples</span>=<span class="ruby-constant">FileSplitter</span><span class="ruby-operator">::</span><span class="ruby-constant">DEFAULT_CHUNK_SIZE</span>)
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+
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+ <span class="ruby-identifier">prepare_platform_upload</span>(<span class="ruby-identifier">store</span>, <span class="ruby-identifier">src_dir</span>, <span class="ruby-identifier">collection_dir</span>)
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+ <span class="ruby-identifier">collection</span> = <span class="ruby-constant">Pho</span><span class="ruby-operator">::</span><span class="ruby-constant">FileManagement</span><span class="ruby-operator">::</span><span class="ruby-constant">RDFManager</span>.<span class="ruby-identifier">new</span>(<span class="ruby-identifier">store</span>, <span class="ruby-identifier">collection_dir</span>)
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+ <span class="ruby-identifier">collection</span>.<span class="ruby-identifier">store</span>()
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+ <span class="ruby-keyword kw">return</span> <span class="ruby-identifier">collection</span>
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+ <span class="ruby-keyword kw">end</span>
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+ </pre>
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+ </div>
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+ </div>
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+ </div>
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+
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+ <div id="method-M000002" class="method-detail">
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+ <a name="M000002"></a>
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+
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+ <div class="method-heading">
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+ <a href="#M000002" class="method-signature">
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+ <span class="method-name">prepare_platform_upload</span><span class="method-args">(store, src_dir, collection_dir, triples=FileSplitter::DEFAULT_CHUNK_SIZE)</span>
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+ </a>
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+ </div>
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+
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+ <div class="method-description">
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+ <p>
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+ Take a directory of files, copy them to temporary directory, splitting
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+ where necessary, in preparation for uploading to a platform store.
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+ </p>
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+ <p>
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+ Source directory is scanned for ntriple, turtle and RDF/XML files. All of
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+ these are automatically chunked into 10,000 triple chunks and re-serialized
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+ as ntriples
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+ </p>
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+ <p>
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+ BNodes are automatically re-written to full uris.
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+ </p>
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+ <pre>
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+ store:: Pho::Store into which data will be posted. Used to normalizing bnodes
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+ src_dir:: directory containing source data.
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+ </pre>
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+ <p><a class="source-toggle" href="#"
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+ onclick="toggleCode('M000002-source');return false;">[Source]</a></p>
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+ <div class="method-source-code" id="M000002-source">
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+ <pre>
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+ <span class="ruby-comment cmt"># File lib/pho/upload.rb, line 124</span>
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+ <span class="ruby-keyword kw">def</span> <span class="ruby-constant">Util</span>.<span class="ruby-identifier">prepare_platform_upload</span>(<span class="ruby-identifier">store</span>, <span class="ruby-identifier">src_dir</span>, <span class="ruby-identifier">collection_dir</span>,
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+ <span class="ruby-identifier">triples</span>=<span class="ruby-constant">FileSplitter</span><span class="ruby-operator">::</span><span class="ruby-constant">DEFAULT_CHUNK_SIZE</span>)
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+
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+ <span class="ruby-identifier">handler</span> = <span class="ruby-constant">BNodeRewritingHandler</span>.<span class="ruby-identifier">new</span>( <span class="ruby-identifier">store</span>.<span class="ruby-identifier">build_uri</span>(<span class="ruby-value str">&quot;/items&quot;</span>) )
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+ <span class="ruby-identifier">splitter</span> = <span class="ruby-constant">FileSplitter</span>.<span class="ruby-identifier">new</span>(<span class="ruby-identifier">collection_dir</span>, <span class="ruby-identifier">triples</span>, <span class="ruby-identifier">handler</span> )
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+
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+ <span class="ruby-identifier">formats</span> = [ [<span class="ruby-value str">&quot;*.rdf&quot;</span>, <span class="ruby-identifier">:rdfxml</span>], [<span class="ruby-value str">&quot;*.nt&quot;</span>, <span class="ruby-identifier">:ntriples</span>], [<span class="ruby-value str">&quot;*.ttl&quot;</span>, <span class="ruby-identifier">:turtle</span>] ]
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+ <span class="ruby-identifier">formats</span>.<span class="ruby-identifier">each</span> <span class="ruby-keyword kw">do</span> <span class="ruby-operator">|</span><span class="ruby-identifier">format</span><span class="ruby-operator">|</span>
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+
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+ <span class="ruby-identifier">files</span> = <span class="ruby-constant">Dir</span>.<span class="ruby-identifier">glob</span>( <span class="ruby-constant">File</span>.<span class="ruby-identifier">join</span>(<span class="ruby-identifier">src_dir</span>, <span class="ruby-identifier">format</span>[<span class="ruby-value">0</span>] ) )
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+ <span class="ruby-identifier">splitter</span>.<span class="ruby-identifier">split_files</span>(<span class="ruby-identifier">files</span>, <span class="ruby-identifier">format</span>[<span class="ruby-value">1</span>] )
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+
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+ <span class="ruby-keyword kw">end</span>
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+ <span class="ruby-keyword kw">return</span> <span class="ruby-keyword kw">true</span>
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+
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+ <span class="ruby-keyword kw">end</span>
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+ </pre>
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+ </div>
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+ </div>
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+ </div>
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+
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+
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+ </div>
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+
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+
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+ </div>
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+
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+
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+ <div id="validator-badges">
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+ <p><small><a href="http://validator.w3.org/check/referer">[Validate]</a></small></p>
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+ </div>
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+
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+ </body>
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+ </html>