pharmaobservatory 0.1.3 → 0.1.4

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (175) hide show
  1. checksums.yaml +4 -4
  2. data/README.md +101 -4
  3. data/docs/BiomarkerBqpAssertionsRow.md +1 -1
  4. data/docs/BiomarkerEvidenceRow.md +1 -1
  5. data/docs/BiomarkerLiteratureRow.md +1 -1
  6. data/docs/BiomarkerRelationsResponse.md +58 -0
  7. data/docs/BiomarkerRelationsRow.md +54 -0
  8. data/docs/BiomarkerSampleCoverageResponse.md +58 -0
  9. data/docs/BiomarkerSampleCoverageRow.md +36 -0
  10. data/docs/BiomarkerSamplePrevalenceResponse.md +58 -0
  11. data/docs/BiomarkerSamplePrevalenceRow.md +56 -0
  12. data/docs/BiomarkerValidationResponse.md +58 -0
  13. data/docs/BiomarkerValidationRow.md +70 -0
  14. data/docs/BiomarkersApi.md +320 -0
  15. data/docs/BiomarkersRow.md +2 -2
  16. data/docs/CellLinesRow.md +1 -1
  17. data/docs/CompaniesApi.md +410 -0
  18. data/docs/CompaniesRecord.md +1 -1
  19. data/docs/CompaniesRecordAttributes.md +18 -0
  20. data/docs/CompaniesRow.md +7 -3
  21. data/docs/CompanyAssetsResponse.md +58 -0
  22. data/docs/CompanyAssetsRow.md +42 -0
  23. data/docs/CompanyFundingEventsResponse.md +58 -0
  24. data/docs/CompanyFundingEventsRow.md +62 -0
  25. data/docs/CompanyFundingSummaryResponse.md +58 -0
  26. data/docs/CompanyFundingSummaryRow.md +46 -0
  27. data/docs/CompanyProgramsRow.md +2 -2
  28. data/docs/ConditionAdverseEventsResponse.md +58 -0
  29. data/docs/ConditionAdverseEventsRow.md +24 -0
  30. data/docs/ConditionBurdenResponse.md +58 -0
  31. data/docs/ConditionBurdenRow.md +32 -0
  32. data/docs/ConditionDeliveryResponse.md +58 -0
  33. data/docs/ConditionDeliveryRow.md +44 -0
  34. data/docs/ConditionDrugsResponse.md +58 -0
  35. data/docs/ConditionDrugsRow.md +26 -0
  36. data/docs/ConditionPrevalenceResponse.md +58 -0
  37. data/docs/ConditionPrevalenceRow.md +62 -0
  38. data/docs/ConditionPublicationsResponse.md +58 -0
  39. data/docs/ConditionPublicationsRow.md +32 -0
  40. data/docs/ConditionSitesResponse.md +58 -0
  41. data/docs/ConditionSitesRow.md +28 -0
  42. data/docs/ConditionTrialsResponse.md +58 -0
  43. data/docs/ConditionTrialsRow.md +58 -0
  44. data/docs/ConditionsApi.md +953 -0
  45. data/docs/ConditionsRecord.md +38 -0
  46. data/docs/ConditionsRecordAttributes.md +20 -0
  47. data/docs/ConditionsResponse.md +58 -0
  48. data/docs/ConditionsRow.md +32 -0
  49. data/docs/DrugPatentCliffRow.md +1 -1
  50. data/docs/InstitutionalHoldingsRow.md +3 -1
  51. data/docs/LegalEntitiesApi.md +160 -0
  52. data/docs/LegalEntitiesRow.md +1 -1
  53. data/docs/OwnershipPositionsResponse.md +58 -0
  54. data/docs/OwnershipPositionsRow.md +100 -0
  55. data/docs/PdufaDatesRow.md +2 -2
  56. data/docs/SiteCroTrialsRow.md +1 -1
  57. data/docs/SiteTrialConditionsRow.md +1 -1
  58. data/docs/SiteTrialDrugsRow.md +1 -1
  59. data/docs/SiteTrialsRow.md +1 -1
  60. data/docs/SponsorRecruitmentByPhaseRow.md +2 -2
  61. data/docs/SponsorRecruitmentDurationRow.md +1 -1
  62. data/docs/SponsorTrialsRow.md +2 -2
  63. data/docs/TrialAdverseEventsResponse.md +58 -0
  64. data/docs/TrialAdverseEventsRow.md +28 -0
  65. data/docs/TrialChangesResponse.md +58 -0
  66. data/docs/TrialChangesRow.md +36 -0
  67. data/docs/TrialDeliveryResponse.md +58 -0
  68. data/docs/TrialDeliveryRow.md +64 -0
  69. data/docs/TrialDemographicsResponse.md +58 -0
  70. data/docs/TrialDemographicsRow.md +32 -0
  71. data/docs/TrialDrugsResponse.md +58 -0
  72. data/docs/TrialDrugsRow.md +30 -0
  73. data/docs/TrialEnrollmentHistoryResponse.md +58 -0
  74. data/docs/TrialEnrollmentHistoryRow.md +36 -0
  75. data/docs/TrialEnrollmentRateResponse.md +58 -0
  76. data/docs/TrialEnrollmentRateRow.md +58 -0
  77. data/docs/TrialExtractedEndpointsResponse.md +58 -0
  78. data/docs/TrialExtractedEndpointsRow.md +40 -0
  79. data/docs/TrialOutcomeMeasuresResponse.md +58 -0
  80. data/docs/TrialOutcomeMeasuresRow.md +28 -0
  81. data/docs/TrialSitesResponse.md +58 -0
  82. data/docs/TrialSitesRow.md +46 -0
  83. data/docs/TrialsApi.md +1033 -0
  84. data/docs/TrialsRecord.md +38 -0
  85. data/docs/TrialsRecordAttributes.md +24 -0
  86. data/docs/TrialsResponse.md +58 -0
  87. data/docs/TrialsRow.md +116 -0
  88. data/lib/pharmaobservatory/api/biomarkers_api.rb +336 -0
  89. data/lib/pharmaobservatory/api/companies_api.rb +455 -0
  90. data/lib/pharmaobservatory/api/conditions_api.rb +1001 -0
  91. data/lib/pharmaobservatory/api/legal_entities_api.rb +168 -0
  92. data/lib/pharmaobservatory/api/trials_api.rb +1085 -0
  93. data/lib/pharmaobservatory/models/biomarker_bqp_assertions_row.rb +1 -1
  94. data/lib/pharmaobservatory/models/biomarker_evidence_row.rb +1 -1
  95. data/lib/pharmaobservatory/models/biomarker_literature_row.rb +1 -1
  96. data/lib/pharmaobservatory/models/biomarker_relations_response.rb +478 -0
  97. data/lib/pharmaobservatory/models/biomarker_relations_row.rb +421 -0
  98. data/lib/pharmaobservatory/models/biomarker_sample_coverage_response.rb +478 -0
  99. data/lib/pharmaobservatory/models/biomarker_sample_coverage_row.rb +322 -0
  100. data/lib/pharmaobservatory/models/biomarker_sample_prevalence_response.rb +478 -0
  101. data/lib/pharmaobservatory/models/biomarker_sample_prevalence_row.rb +436 -0
  102. data/lib/pharmaobservatory/models/biomarker_validation_response.rb +478 -0
  103. data/lib/pharmaobservatory/models/biomarker_validation_row.rb +509 -0
  104. data/lib/pharmaobservatory/models/biomarkers_row.rb +2 -2
  105. data/lib/pharmaobservatory/models/cell_lines_row.rb +1 -1
  106. data/lib/pharmaobservatory/models/companies_record.rb +1 -1
  107. data/lib/pharmaobservatory/models/companies_record_attributes.rb +220 -0
  108. data/lib/pharmaobservatory/models/companies_row.rb +29 -7
  109. data/lib/pharmaobservatory/models/company_assets_response.rb +478 -0
  110. data/lib/pharmaobservatory/models/company_assets_row.rb +355 -0
  111. data/lib/pharmaobservatory/models/company_funding_events_response.rb +478 -0
  112. data/lib/pharmaobservatory/models/company_funding_events_row.rb +465 -0
  113. data/lib/pharmaobservatory/models/company_funding_summary_response.rb +478 -0
  114. data/lib/pharmaobservatory/models/company_funding_summary_row.rb +377 -0
  115. data/lib/pharmaobservatory/models/company_programs_row.rb +2 -2
  116. data/lib/pharmaobservatory/models/condition_adverse_events_response.rb +478 -0
  117. data/lib/pharmaobservatory/models/condition_adverse_events_row.rb +256 -0
  118. data/lib/pharmaobservatory/models/condition_burden_response.rb +478 -0
  119. data/lib/pharmaobservatory/models/condition_burden_row.rb +300 -0
  120. data/lib/pharmaobservatory/models/condition_delivery_response.rb +478 -0
  121. data/lib/pharmaobservatory/models/condition_delivery_row.rb +366 -0
  122. data/lib/pharmaobservatory/models/condition_drugs_response.rb +478 -0
  123. data/lib/pharmaobservatory/models/condition_drugs_row.rb +267 -0
  124. data/lib/pharmaobservatory/models/condition_prevalence_response.rb +478 -0
  125. data/lib/pharmaobservatory/models/condition_prevalence_row.rb +465 -0
  126. data/lib/pharmaobservatory/models/condition_publications_response.rb +478 -0
  127. data/lib/pharmaobservatory/models/condition_publications_row.rb +300 -0
  128. data/lib/pharmaobservatory/models/condition_sites_response.rb +478 -0
  129. data/lib/pharmaobservatory/models/condition_sites_row.rb +278 -0
  130. data/lib/pharmaobservatory/models/condition_trials_response.rb +478 -0
  131. data/lib/pharmaobservatory/models/condition_trials_row.rb +443 -0
  132. data/lib/pharmaobservatory/models/conditions_record.rb +385 -0
  133. data/lib/pharmaobservatory/models/conditions_record_attributes.rb +229 -0
  134. data/lib/pharmaobservatory/models/conditions_response.rb +478 -0
  135. data/lib/pharmaobservatory/models/conditions_row.rb +304 -0
  136. data/lib/pharmaobservatory/models/drug_patent_cliff_row.rb +1 -1
  137. data/lib/pharmaobservatory/models/institutional_holdings_row.rb +13 -2
  138. data/lib/pharmaobservatory/models/legal_entities_row.rb +1 -1
  139. data/lib/pharmaobservatory/models/ownership_positions_response.rb +478 -0
  140. data/lib/pharmaobservatory/models/ownership_positions_row.rb +674 -0
  141. data/lib/pharmaobservatory/models/pdufa_dates_row.rb +2 -2
  142. data/lib/pharmaobservatory/models/site_cro_trials_row.rb +1 -1
  143. data/lib/pharmaobservatory/models/site_trial_conditions_row.rb +1 -1
  144. data/lib/pharmaobservatory/models/site_trial_drugs_row.rb +1 -1
  145. data/lib/pharmaobservatory/models/site_trials_row.rb +1 -1
  146. data/lib/pharmaobservatory/models/sponsor_recruitment_by_phase_row.rb +2 -2
  147. data/lib/pharmaobservatory/models/sponsor_recruitment_duration_row.rb +1 -1
  148. data/lib/pharmaobservatory/models/sponsor_trials_row.rb +2 -2
  149. data/lib/pharmaobservatory/models/trial_adverse_events_response.rb +478 -0
  150. data/lib/pharmaobservatory/models/trial_adverse_events_row.rb +278 -0
  151. data/lib/pharmaobservatory/models/trial_changes_response.rb +478 -0
  152. data/lib/pharmaobservatory/models/trial_changes_row.rb +328 -0
  153. data/lib/pharmaobservatory/models/trial_delivery_response.rb +478 -0
  154. data/lib/pharmaobservatory/models/trial_delivery_row.rb +476 -0
  155. data/lib/pharmaobservatory/models/trial_demographics_response.rb +478 -0
  156. data/lib/pharmaobservatory/models/trial_demographics_row.rb +300 -0
  157. data/lib/pharmaobservatory/models/trial_drugs_response.rb +478 -0
  158. data/lib/pharmaobservatory/models/trial_drugs_row.rb +291 -0
  159. data/lib/pharmaobservatory/models/trial_enrollment_history_response.rb +478 -0
  160. data/lib/pharmaobservatory/models/trial_enrollment_history_row.rb +322 -0
  161. data/lib/pharmaobservatory/models/trial_enrollment_rate_response.rb +478 -0
  162. data/lib/pharmaobservatory/models/trial_enrollment_rate_row.rb +443 -0
  163. data/lib/pharmaobservatory/models/trial_extracted_endpoints_response.rb +478 -0
  164. data/lib/pharmaobservatory/models/trial_extracted_endpoints_row.rb +346 -0
  165. data/lib/pharmaobservatory/models/trial_outcome_measures_response.rb +478 -0
  166. data/lib/pharmaobservatory/models/trial_outcome_measures_row.rb +278 -0
  167. data/lib/pharmaobservatory/models/trial_sites_response.rb +478 -0
  168. data/lib/pharmaobservatory/models/trial_sites_row.rb +377 -0
  169. data/lib/pharmaobservatory/models/trials_record.rb +385 -0
  170. data/lib/pharmaobservatory/models/trials_record_attributes.rb +247 -0
  171. data/lib/pharmaobservatory/models/trials_response.rb +478 -0
  172. data/lib/pharmaobservatory/models/trials_row.rb +784 -0
  173. data/lib/pharmaobservatory/version.rb +1 -1
  174. data/lib/pharmaobservatory.rb +63 -0
  175. metadata +127 -1
@@ -19,6 +19,90 @@ module PharmaObservatory
19
19
  def initialize(api_client = ApiClient.default)
20
20
  @api_client = api_client
21
21
  end
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+ # Company assets (approved and marketed drugs)
23
+ # @param id [String]
24
+ # @param [Hash] opts the optional parameters
25
+ # @option opts [String] :cursor The next_cursor of the previous page. Opaque; it is bound to the filters and the warehouse build that issued it.
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+ # @option opts [Integer] :limit Rows per page, up to 500 (default 50).
27
+ # @option opts [String] :sort Comma separated columns, a leading minus for descending: sort=a,-b.
28
+ # @option opts [String] :group_by A dimension to group by; a date takes :year, :quarter or :month.
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+ # @option opts [String] :measure count, sum(col), avg(col), min(col), max(col), median(col) or count_distinct(col).
30
+ # @return [CompanyAssetsResponse]
31
+ def legal_entities_company_assets(id, opts = {})
32
+ data, _status_code, _headers = legal_entities_company_assets_with_http_info(id, opts)
33
+ data
34
+ end
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+
36
+ # Company assets (approved and marketed drugs)
37
+ # @param id [String]
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+ # @param [Hash] opts the optional parameters
39
+ # @option opts [String] :cursor The next_cursor of the previous page. Opaque; it is bound to the filters and the warehouse build that issued it.
40
+ # @option opts [Integer] :limit Rows per page, up to 500 (default 50).
41
+ # @option opts [String] :sort Comma separated columns, a leading minus for descending: sort=a,-b.
42
+ # @option opts [String] :group_by A dimension to group by; a date takes :year, :quarter or :month.
43
+ # @option opts [String] :measure count, sum(col), avg(col), min(col), max(col), median(col) or count_distinct(col).
44
+ # @return [Array<(CompanyAssetsResponse, Integer, Hash)>] CompanyAssetsResponse data, response status code and response headers
45
+ def legal_entities_company_assets_with_http_info(id, opts = {})
46
+ if @api_client.config.debugging
47
+ @api_client.config.logger.debug 'Calling API: LegalEntitiesApi.legal_entities_company_assets ...'
48
+ end
49
+ # verify the required parameter 'id' is set
50
+ if @api_client.config.client_side_validation && id.nil?
51
+ fail ArgumentError, "Missing the required parameter 'id' when calling LegalEntitiesApi.legal_entities_company_assets"
52
+ end
53
+ if @api_client.config.client_side_validation && !opts[:'limit'].nil? && opts[:'limit'] > 500
54
+ fail ArgumentError, 'invalid value for "opts[:"limit"]" when calling LegalEntitiesApi.legal_entities_company_assets, must be smaller than or equal to 500.'
55
+ end
56
+
57
+ if @api_client.config.client_side_validation && !opts[:'limit'].nil? && opts[:'limit'] < 1
58
+ fail ArgumentError, 'invalid value for "opts[:"limit"]" when calling LegalEntitiesApi.legal_entities_company_assets, must be greater than or equal to 1.'
59
+ end
60
+
61
+ # resource path
62
+ local_var_path = '/api/v1/legal_entities/{id}/company_assets'.sub('{' + 'id' + '}', CGI.escape(id.to_s))
63
+
64
+ # query parameters
65
+ query_params = opts[:query_params] || {}
66
+ query_params[:'cursor'] = opts[:'cursor'] if !opts[:'cursor'].nil?
67
+ query_params[:'limit'] = opts[:'limit'] if !opts[:'limit'].nil?
68
+ query_params[:'sort'] = opts[:'sort'] if !opts[:'sort'].nil?
69
+ query_params[:'group_by'] = opts[:'group_by'] if !opts[:'group_by'].nil?
70
+ query_params[:'measure'] = opts[:'measure'] if !opts[:'measure'].nil?
71
+
72
+ # header parameters
73
+ header_params = opts[:header_params] || {}
74
+ # HTTP header 'Accept' (if needed)
75
+ header_params['Accept'] = @api_client.select_header_accept(['application/json']) unless header_params['Accept']
76
+
77
+ # form parameters
78
+ form_params = opts[:form_params] || {}
79
+
80
+ # http body (model)
81
+ post_body = opts[:debug_body]
82
+
83
+ # return_type
84
+ return_type = opts[:debug_return_type] || 'CompanyAssetsResponse'
85
+
86
+ # auth_names
87
+ auth_names = opts[:debug_auth_names] || ['ApiBearerJwt']
88
+
89
+ new_options = opts.merge(
90
+ :operation => :"LegalEntitiesApi.legal_entities_company_assets",
91
+ :header_params => header_params,
92
+ :query_params => query_params,
93
+ :form_params => form_params,
94
+ :body => post_body,
95
+ :auth_names => auth_names,
96
+ :return_type => return_type
97
+ )
98
+
99
+ data, status_code, headers = @api_client.call_api(:GET, local_var_path, new_options)
100
+ if @api_client.config.debugging
101
+ @api_client.config.logger.debug "API called: LegalEntitiesApi#legal_entities_company_assets\nData: #{data.inspect}\nStatus code: #{status_code}\nHeaders: #{headers}"
102
+ end
103
+ return data, status_code, headers
104
+ end
105
+
22
106
  # Company programs
23
107
  # @param id [String]
24
108
  # @param [Hash] opts the optional parameters
@@ -410,6 +494,90 @@ module PharmaObservatory
410
494
  return data, status_code, headers
411
495
  end
412
496
 
497
+ # Ownership and control positions
498
+ # @param id [String]
499
+ # @param [Hash] opts the optional parameters
500
+ # @option opts [String] :cursor The next_cursor of the previous page. Opaque; it is bound to the filters and the warehouse build that issued it.
501
+ # @option opts [Integer] :limit Rows per page, up to 500 (default 50).
502
+ # @option opts [String] :sort Comma separated columns, a leading minus for descending: sort&#x3D;a,-b.
503
+ # @option opts [String] :group_by A dimension to group by; a date takes :year, :quarter or :month.
504
+ # @option opts [String] :measure count, sum(col), avg(col), min(col), max(col), median(col) or count_distinct(col).
505
+ # @return [OwnershipPositionsResponse]
506
+ def legal_entities_ownership_positions(id, opts = {})
507
+ data, _status_code, _headers = legal_entities_ownership_positions_with_http_info(id, opts)
508
+ data
509
+ end
510
+
511
+ # Ownership and control positions
512
+ # @param id [String]
513
+ # @param [Hash] opts the optional parameters
514
+ # @option opts [String] :cursor The next_cursor of the previous page. Opaque; it is bound to the filters and the warehouse build that issued it.
515
+ # @option opts [Integer] :limit Rows per page, up to 500 (default 50).
516
+ # @option opts [String] :sort Comma separated columns, a leading minus for descending: sort&#x3D;a,-b.
517
+ # @option opts [String] :group_by A dimension to group by; a date takes :year, :quarter or :month.
518
+ # @option opts [String] :measure count, sum(col), avg(col), min(col), max(col), median(col) or count_distinct(col).
519
+ # @return [Array<(OwnershipPositionsResponse, Integer, Hash)>] OwnershipPositionsResponse data, response status code and response headers
520
+ def legal_entities_ownership_positions_with_http_info(id, opts = {})
521
+ if @api_client.config.debugging
522
+ @api_client.config.logger.debug 'Calling API: LegalEntitiesApi.legal_entities_ownership_positions ...'
523
+ end
524
+ # verify the required parameter 'id' is set
525
+ if @api_client.config.client_side_validation && id.nil?
526
+ fail ArgumentError, "Missing the required parameter 'id' when calling LegalEntitiesApi.legal_entities_ownership_positions"
527
+ end
528
+ if @api_client.config.client_side_validation && !opts[:'limit'].nil? && opts[:'limit'] > 500
529
+ fail ArgumentError, 'invalid value for "opts[:"limit"]" when calling LegalEntitiesApi.legal_entities_ownership_positions, must be smaller than or equal to 500.'
530
+ end
531
+
532
+ if @api_client.config.client_side_validation && !opts[:'limit'].nil? && opts[:'limit'] < 1
533
+ fail ArgumentError, 'invalid value for "opts[:"limit"]" when calling LegalEntitiesApi.legal_entities_ownership_positions, must be greater than or equal to 1.'
534
+ end
535
+
536
+ # resource path
537
+ local_var_path = '/api/v1/legal_entities/{id}/ownership_positions'.sub('{' + 'id' + '}', CGI.escape(id.to_s))
538
+
539
+ # query parameters
540
+ query_params = opts[:query_params] || {}
541
+ query_params[:'cursor'] = opts[:'cursor'] if !opts[:'cursor'].nil?
542
+ query_params[:'limit'] = opts[:'limit'] if !opts[:'limit'].nil?
543
+ query_params[:'sort'] = opts[:'sort'] if !opts[:'sort'].nil?
544
+ query_params[:'group_by'] = opts[:'group_by'] if !opts[:'group_by'].nil?
545
+ query_params[:'measure'] = opts[:'measure'] if !opts[:'measure'].nil?
546
+
547
+ # header parameters
548
+ header_params = opts[:header_params] || {}
549
+ # HTTP header 'Accept' (if needed)
550
+ header_params['Accept'] = @api_client.select_header_accept(['application/json']) unless header_params['Accept']
551
+
552
+ # form parameters
553
+ form_params = opts[:form_params] || {}
554
+
555
+ # http body (model)
556
+ post_body = opts[:debug_body]
557
+
558
+ # return_type
559
+ return_type = opts[:debug_return_type] || 'OwnershipPositionsResponse'
560
+
561
+ # auth_names
562
+ auth_names = opts[:debug_auth_names] || ['ApiBearerJwt']
563
+
564
+ new_options = opts.merge(
565
+ :operation => :"LegalEntitiesApi.legal_entities_ownership_positions",
566
+ :header_params => header_params,
567
+ :query_params => query_params,
568
+ :form_params => form_params,
569
+ :body => post_body,
570
+ :auth_names => auth_names,
571
+ :return_type => return_type
572
+ )
573
+
574
+ data, status_code, headers = @api_client.call_api(:GET, local_var_path, new_options)
575
+ if @api_client.config.debugging
576
+ @api_client.config.logger.debug "API called: LegalEntitiesApi#legal_entities_ownership_positions\nData: #{data.inspect}\nStatus code: #{status_code}\nHeaders: #{headers}"
577
+ end
578
+ return data, status_code, headers
579
+ end
580
+
413
581
  # FDA decision dates (PDUFA) and catalysts
414
582
  # @param id [String]
415
583
  # @param [Hash] opts the optional parameters