pharmaobservatory 0.1.1 → 0.1.2

data/lib/pharmaobservatory/models/api_v1_resolve_entity_get200_response.rb

@@ -1,383 +0,0 @@
-=begin
-#Pharma Observatory Public REST API
-
-#Read-only REST API over the Pharma Observatory biomedical data platform. Reference: https://pharmaobservatory.com/api-reference
-
-The version of the OpenAPI document: 1.0.0
-
-Generated by: https://openapi-generator.tech
-Generator version: 7.13.0
-
-=end
-
-require 'date'
-require 'time'
-
-module PharmaObservatory
-  class ApiV1ResolveEntityGet200Response
-    attr_accessor :spine
-
-    attr_accessor :mode
-
-    attr_accessor :query
-
-    attr_accessor :source_type
-
-    attr_accessor :raw_key
-
-    attr_accessor :candidates
-
-    attr_accessor :persistence_stable
-
-    attr_accessor :message
-
-    attr_accessor :resolution_confidence
-
-    attr_accessor :build_state
-
-    # Attribute mapping from ruby-style variable name to JSON key.
-    def self.attribute_map
-      {
-        :'spine' => :'spine',
-        :'mode' => :'mode',
-        :'query' => :'query',
-        :'source_type' => :'source_type',
-        :'raw_key' => :'raw_key',
-        :'candidates' => :'candidates',
-        :'persistence_stable' => :'persistence_stable',
-        :'message' => :'message',
-        :'resolution_confidence' => :'resolution_confidence',
-        :'build_state' => :'build_state'
-      }
-    end
-
-    # Returns attribute mapping this model knows about
-    def self.acceptable_attribute_map
-      attribute_map
-    end
-
-    # Returns all the JSON keys this model knows about
-    def self.acceptable_attributes
-      acceptable_attribute_map.values
-    end
-
-    # Attribute type mapping.
-    def self.openapi_types
-      {
-        :'spine' => :'String',
-        :'mode' => :'String',
-        :'query' => :'String',
-        :'source_type' => :'String',
-        :'raw_key' => :'String',
-        :'candidates' => :'Array<ApiV1ResolveEntityGet200ResponseCandidatesInner>',
-        :'persistence_stable' => :'Boolean',
-        :'message' => :'String',
-        :'resolution_confidence' => :'ApiV1ResolveEntityGet200ResponseResolutionConfidence',
-        :'build_state' => :'ApiV1BiomarkerAssayScreenGet200ResponseBuildState'
-      }
-    end
-
-    # List of attributes with nullable: true
-    def self.openapi_nullable
-      Set.new([
-        :'query',
-        :'source_type',
-        :'raw_key',
-        :'persistence_stable',
-      ])
-    end
-
-    # Initializes the object
-    # @param [Hash] attributes Model attributes in the form of hash
-    def initialize(attributes = {})
-      if (!attributes.is_a?(Hash))
-        fail ArgumentError, "The input argument (attributes) must be a hash in `PharmaObservatory::ApiV1ResolveEntityGet200Response` initialize method"
-      end
-
-      # check to see if the attribute exists and convert string to symbol for hash key
-      acceptable_attribute_map = self.class.acceptable_attribute_map
-      attributes = attributes.each_with_object({}) { |(k, v), h|
-        if (!acceptable_attribute_map.key?(k.to_sym))
-          fail ArgumentError, "`#{k}` is not a valid attribute in `PharmaObservatory::ApiV1ResolveEntityGet200Response`. Please check the name to make sure it's valid. List of attributes: " + acceptable_attribute_map.keys.inspect
-        end
-        h[k.to_sym] = v
-      }
-
-      if attributes.key?(:'spine')
-        self.spine = attributes[:'spine']
-      else
-        self.spine = nil
-      end
-
-      if attributes.key?(:'mode')
-        self.mode = attributes[:'mode']
-      else
-        self.mode = nil
-      end
-
-      if attributes.key?(:'query')
-        self.query = attributes[:'query']
-      else
-        self.query = nil
-      end
-
-      if attributes.key?(:'source_type')
-        self.source_type = attributes[:'source_type']
-      else
-        self.source_type = nil
-      end
-
-      if attributes.key?(:'raw_key')
-        self.raw_key = attributes[:'raw_key']
-      else
-        self.raw_key = nil
-      end
-
-      if attributes.key?(:'candidates')
-        if (value = attributes[:'candidates']).is_a?(Array)
-          self.candidates = value
-        end
-      else
-        self.candidates = nil
-      end
-
-      if attributes.key?(:'persistence_stable')
-        self.persistence_stable = attributes[:'persistence_stable']
-      else
-        self.persistence_stable = nil
-      end
-
-      if attributes.key?(:'message')
-        self.message = attributes[:'message']
-      end
-
-      if attributes.key?(:'resolution_confidence')
-        self.resolution_confidence = attributes[:'resolution_confidence']
-      else
-        self.resolution_confidence = nil
-      end
-
-      if attributes.key?(:'build_state')
-        self.build_state = attributes[:'build_state']
-      end
-    end
-
-    # Show invalid properties with the reasons. Usually used together with valid?
-    # @return Array for valid properties with the reasons
-    def list_invalid_properties
-      warn '[DEPRECATED] the `list_invalid_properties` method is obsolete'
-      invalid_properties = Array.new
-      if @spine.nil?
-        invalid_properties.push('invalid value for "spine", spine cannot be nil.')
-      end
-
-      if @mode.nil?
-        invalid_properties.push('invalid value for "mode", mode cannot be nil.')
-      end
-
-      if @candidates.nil?
-        invalid_properties.push('invalid value for "candidates", candidates cannot be nil.')
-      end
-
-      if @resolution_confidence.nil?
-        invalid_properties.push('invalid value for "resolution_confidence", resolution_confidence cannot be nil.')
-      end
-
-      invalid_properties
-    end
-
-    # Check to see if the all the properties in the model are valid
-    # @return true if the model is valid
-    def valid?
-      warn '[DEPRECATED] the `valid?` method is obsolete'
-      return false if @spine.nil?
-      return false if @mode.nil?
-      return false if @candidates.nil?
-      return false if @resolution_confidence.nil?
-      true
-    end
-
-    # Custom attribute writer method with validation
-    # @param [Object] spine Value to be assigned
-    def spine=(spine)
-      if spine.nil?
-        fail ArgumentError, 'spine cannot be nil'
-      end
-
-      @spine = spine
-    end
-
-    # Custom attribute writer method with validation
-    # @param [Object] mode Value to be assigned
-    def mode=(mode)
-      if mode.nil?
-        fail ArgumentError, 'mode cannot be nil'
-      end
-
-      @mode = mode
-    end
-
-    # Custom attribute writer method with validation
-    # @param [Object] candidates Value to be assigned
-    def candidates=(candidates)
-      if candidates.nil?
-        fail ArgumentError, 'candidates cannot be nil'
-      end
-
-      @candidates = candidates
-    end
-
-    # Custom attribute writer method with validation
-    # @param [Object] resolution_confidence Value to be assigned
-    def resolution_confidence=(resolution_confidence)
-      if resolution_confidence.nil?
-        fail ArgumentError, 'resolution_confidence cannot be nil'
-      end
-
-      @resolution_confidence = resolution_confidence
-    end
-
-    # Checks equality by comparing each attribute.
-    # @param [Object] Object to be compared
-    def ==(o)
-      return true if self.equal?(o)
-      self.class == o.class &&
-          spine == o.spine &&
-          mode == o.mode &&
-          query == o.query &&
-          source_type == o.source_type &&
-          raw_key == o.raw_key &&
-          candidates == o.candidates &&
-          persistence_stable == o.persistence_stable &&
-          message == o.message &&
-          resolution_confidence == o.resolution_confidence &&
-          build_state == o.build_state
-    end
-
-    # @see the `==` method
-    # @param [Object] Object to be compared
-    def eql?(o)
-      self == o
-    end
-
-    # Calculates hash code according to all attributes.
-    # @return [Integer] Hash code
-    def hash
-      [spine, mode, query, source_type, raw_key, candidates, persistence_stable, message, resolution_confidence, build_state].hash
-    end
-
-    # Builds the object from hash
-    # @param [Hash] attributes Model attributes in the form of hash
-    # @return [Object] Returns the model itself
-    def self.build_from_hash(attributes)
-      return nil unless attributes.is_a?(Hash)
-      attributes = attributes.transform_keys(&:to_sym)
-      transformed_hash = {}
-      openapi_types.each_pair do |key, type|
-        if attributes.key?(attribute_map[key]) && attributes[attribute_map[key]].nil?
-          transformed_hash["#{key}"] = nil
-        elsif type =~ /\AArray<(.*)>/i
-          # check to ensure the input is an array given that the attribute
-          # is documented as an array but the input is not
-          if attributes[attribute_map[key]].is_a?(Array)
-            transformed_hash["#{key}"] = attributes[attribute_map[key]].map { |v| _deserialize($1, v) }
-          end
-        elsif !attributes[attribute_map[key]].nil?
-          transformed_hash["#{key}"] = _deserialize(type, attributes[attribute_map[key]])
-        end
-      end
-      new(transformed_hash)
-    end
-
-    # Deserializes the data based on type
-    # @param string type Data type
-    # @param string value Value to be deserialized
-    # @return [Object] Deserialized data
-    def self._deserialize(type, value)
-      case type.to_sym
-      when :Time
-        Time.parse(value)
-      when :Date
-        Date.parse(value)
-      when :String
-        value.to_s
-      when :Integer
-        value.to_i
-      when :Float
-        value.to_f
-      when :Boolean
-        if value.to_s =~ /\A(true|t|yes|y|1)\z/i
-          true
-        else
-          false
-        end
-      when :Object
-        # generic object (usually a Hash), return directly
-        value
-      when /\AArray<(?<inner_type>.+)>\z/
-        inner_type = Regexp.last_match[:inner_type]
-        value.map { |v| _deserialize(inner_type, v) }
-      when /\AHash<(?<k_type>.+?), (?<v_type>.+)>\z/
-        k_type = Regexp.last_match[:k_type]
-        v_type = Regexp.last_match[:v_type]
-        {}.tap do |hash|
-          value.each do |k, v|
-            hash[_deserialize(k_type, k)] = _deserialize(v_type, v)
-          end
-        end
-      else # model
-        # models (e.g. Pet) or oneOf
-        klass = PharmaObservatory.const_get(type)
-        klass.respond_to?(:openapi_any_of) || klass.respond_to?(:openapi_one_of) ? klass.build(value) : klass.build_from_hash(value)
-      end
-    end
-
-    # Returns the string representation of the object
-    # @return [String] String presentation of the object
-    def to_s
-      to_hash.to_s
-    end
-
-    # to_body is an alias to to_hash (backward compatibility)
-    # @return [Hash] Returns the object in the form of hash
-    def to_body
-      to_hash
-    end
-
-    # Returns the object in the form of hash
-    # @return [Hash] Returns the object in the form of hash
-    def to_hash
-      hash = {}
-      self.class.attribute_map.each_pair do |attr, param|
-        value = self.send(attr)
-        if value.nil?
-          is_nullable = self.class.openapi_nullable.include?(attr)
-          next if !is_nullable || (is_nullable && !instance_variable_defined?(:"@#{attr}"))
-        end
-
-        hash[param] = _to_hash(value)
-      end
-      hash
-    end
-
-    # Outputs non-array value in the form of hash
-    # For object, use to_hash. Otherwise, just return the value
-    # @param [Object] value Any valid value
-    # @return [Hash] Returns the value in the form of hash
-    def _to_hash(value)
-      if value.is_a?(Array)
-        value.compact.map { |v| _to_hash(v) }
-      elsif value.is_a?(Hash)
-        {}.tap do |hash|
-          value.each { |k, v| hash[k] = _to_hash(v) }
-        end
-      elsif value.respond_to? :to_hash
-        value.to_hash
-      else
-        value
-      end
-    end
-
-  end
-
-end

data/lib/pharmaobservatory/models/api_v1_resolve_entity_get200_response_candidates_inner.rb

@@ -1,283 +0,0 @@
-=begin
-#Pharma Observatory Public REST API
-
-#Read-only REST API over the Pharma Observatory biomedical data platform. Reference: https://pharmaobservatory.com/api-reference
-
-The version of the OpenAPI document: 1.0.0
-
-Generated by: https://openapi-generator.tech
-Generator version: 7.13.0
-
-=end
-
-require 'date'
-require 'time'
-
-module PharmaObservatory
-  class ApiV1ResolveEntityGet200ResponseCandidatesInner
-    attr_accessor :id
-
-    attr_accessor :display_name
-
-    attr_accessor :subtitle
-
-    attr_accessor :restriction
-
-    attr_accessor :name_withheld_note
-
-    # Attribute mapping from ruby-style variable name to JSON key.
-    def self.attribute_map
-      {
-        :'id' => :'id',
-        :'display_name' => :'display_name',
-        :'subtitle' => :'subtitle',
-        :'restriction' => :'restriction',
-        :'name_withheld_note' => :'name_withheld_note'
-      }
-    end
-
-    # Returns attribute mapping this model knows about
-    def self.acceptable_attribute_map
-      attribute_map
-    end
-
-    # Returns all the JSON keys this model knows about
-    def self.acceptable_attributes
-      acceptable_attribute_map.values
-    end
-
-    # Attribute type mapping.
-    def self.openapi_types
-      {
-        :'id' => :'String',
-        :'display_name' => :'String',
-        :'subtitle' => :'String',
-        :'restriction' => :'ApiV1ResolveEntityGet200ResponseCandidatesInnerRestriction',
-        :'name_withheld_note' => :'String'
-      }
-    end
-
-    # List of attributes with nullable: true
-    def self.openapi_nullable
-      Set.new([
-        :'display_name',
-        :'subtitle',
-        :'restriction',
-        :'name_withheld_note'
-      ])
-    end
-
-    # Initializes the object
-    # @param [Hash] attributes Model attributes in the form of hash
-    def initialize(attributes = {})
-      if (!attributes.is_a?(Hash))
-        fail ArgumentError, "The input argument (attributes) must be a hash in `PharmaObservatory::ApiV1ResolveEntityGet200ResponseCandidatesInner` initialize method"
-      end
-
-      # check to see if the attribute exists and convert string to symbol for hash key
-      acceptable_attribute_map = self.class.acceptable_attribute_map
-      attributes = attributes.each_with_object({}) { |(k, v), h|
-        if (!acceptable_attribute_map.key?(k.to_sym))
-          fail ArgumentError, "`#{k}` is not a valid attribute in `PharmaObservatory::ApiV1ResolveEntityGet200ResponseCandidatesInner`. Please check the name to make sure it's valid. List of attributes: " + acceptable_attribute_map.keys.inspect
-        end
-        h[k.to_sym] = v
-      }
-
-      if attributes.key?(:'id')
-        self.id = attributes[:'id']
-      else
-        self.id = nil
-      end
-
-      if attributes.key?(:'display_name')
-        self.display_name = attributes[:'display_name']
-      else
-        self.display_name = nil
-      end
-
-      if attributes.key?(:'subtitle')
-        self.subtitle = attributes[:'subtitle']
-      else
-        self.subtitle = nil
-      end
-
-      if attributes.key?(:'restriction')
-        self.restriction = attributes[:'restriction']
-      else
-        self.restriction = nil
-      end
-
-      if attributes.key?(:'name_withheld_note')
-        self.name_withheld_note = attributes[:'name_withheld_note']
-      end
-    end
-
-    # Show invalid properties with the reasons. Usually used together with valid?
-    # @return Array for valid properties with the reasons
-    def list_invalid_properties
-      warn '[DEPRECATED] the `list_invalid_properties` method is obsolete'
-      invalid_properties = Array.new
-      if @id.nil?
-        invalid_properties.push('invalid value for "id", id cannot be nil.')
-      end
-
-      invalid_properties
-    end
-
-    # Check to see if the all the properties in the model are valid
-    # @return true if the model is valid
-    def valid?
-      warn '[DEPRECATED] the `valid?` method is obsolete'
-      return false if @id.nil?
-      true
-    end
-
-    # Custom attribute writer method with validation
-    # @param [Object] id Value to be assigned
-    def id=(id)
-      if id.nil?
-        fail ArgumentError, 'id cannot be nil'
-      end
-
-      @id = id
-    end
-
-    # Checks equality by comparing each attribute.
-    # @param [Object] Object to be compared
-    def ==(o)
-      return true if self.equal?(o)
-      self.class == o.class &&
-          id == o.id &&
-          display_name == o.display_name &&
-          subtitle == o.subtitle &&
-          restriction == o.restriction &&
-          name_withheld_note == o.name_withheld_note
-    end
-
-    # @see the `==` method
-    # @param [Object] Object to be compared
-    def eql?(o)
-      self == o
-    end
-
-    # Calculates hash code according to all attributes.
-    # @return [Integer] Hash code
-    def hash
-      [id, display_name, subtitle, restriction, name_withheld_note].hash
-    end
-
-    # Builds the object from hash
-    # @param [Hash] attributes Model attributes in the form of hash
-    # @return [Object] Returns the model itself
-    def self.build_from_hash(attributes)
-      return nil unless attributes.is_a?(Hash)
-      attributes = attributes.transform_keys(&:to_sym)
-      transformed_hash = {}
-      openapi_types.each_pair do |key, type|
-        if attributes.key?(attribute_map[key]) && attributes[attribute_map[key]].nil?
-          transformed_hash["#{key}"] = nil
-        elsif type =~ /\AArray<(.*)>/i
-          # check to ensure the input is an array given that the attribute
-          # is documented as an array but the input is not
-          if attributes[attribute_map[key]].is_a?(Array)
-            transformed_hash["#{key}"] = attributes[attribute_map[key]].map { |v| _deserialize($1, v) }
-          end
-        elsif !attributes[attribute_map[key]].nil?
-          transformed_hash["#{key}"] = _deserialize(type, attributes[attribute_map[key]])
-        end
-      end
-      new(transformed_hash)
-    end
-
-    # Deserializes the data based on type
-    # @param string type Data type
-    # @param string value Value to be deserialized
-    # @return [Object] Deserialized data
-    def self._deserialize(type, value)
-      case type.to_sym
-      when :Time
-        Time.parse(value)
-      when :Date
-        Date.parse(value)
-      when :String
-        value.to_s
-      when :Integer
-        value.to_i
-      when :Float
-        value.to_f
-      when :Boolean
-        if value.to_s =~ /\A(true|t|yes|y|1)\z/i
-          true
-        else
-          false
-        end
-      when :Object
-        # generic object (usually a Hash), return directly
-        value
-      when /\AArray<(?<inner_type>.+)>\z/
-        inner_type = Regexp.last_match[:inner_type]
-        value.map { |v| _deserialize(inner_type, v) }
-      when /\AHash<(?<k_type>.+?), (?<v_type>.+)>\z/
-        k_type = Regexp.last_match[:k_type]
-        v_type = Regexp.last_match[:v_type]
-        {}.tap do |hash|
-          value.each do |k, v|
-            hash[_deserialize(k_type, k)] = _deserialize(v_type, v)
-          end
-        end
-      else # model
-        # models (e.g. Pet) or oneOf
-        klass = PharmaObservatory.const_get(type)
-        klass.respond_to?(:openapi_any_of) || klass.respond_to?(:openapi_one_of) ? klass.build(value) : klass.build_from_hash(value)
-      end
-    end
-
-    # Returns the string representation of the object
-    # @return [String] String presentation of the object
-    def to_s
-      to_hash.to_s
-    end
-
-    # to_body is an alias to to_hash (backward compatibility)
-    # @return [Hash] Returns the object in the form of hash
-    def to_body
-      to_hash
-    end
-
-    # Returns the object in the form of hash
-    # @return [Hash] Returns the object in the form of hash
-    def to_hash
-      hash = {}
-      self.class.attribute_map.each_pair do |attr, param|
-        value = self.send(attr)
-        if value.nil?
-          is_nullable = self.class.openapi_nullable.include?(attr)
-          next if !is_nullable || (is_nullable && !instance_variable_defined?(:"@#{attr}"))
-        end
-
-        hash[param] = _to_hash(value)
-      end
-      hash
-    end
-
-    # Outputs non-array value in the form of hash
-    # For object, use to_hash. Otherwise, just return the value
-    # @param [Object] value Any valid value
-    # @return [Hash] Returns the value in the form of hash
-    def _to_hash(value)
-      if value.is_a?(Array)
-        value.compact.map { |v| _to_hash(v) }
-      elsif value.is_a?(Hash)
-        {}.tap do |hash|
-          value.each { |k, v| hash[k] = _to_hash(v) }
-        end
-      elsif value.respond_to? :to_hash
-        value.to_hash
-      else
-        value
-      end
-    end
-
-  end
-
-end