parse_fasta 0.0.5 → 1.0.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/.gitignore +0 -1
- data/COPYING +674 -0
- data/README.md +56 -6
- data/Rakefile +6 -0
- data/doc/FastaFile.html +292 -0
- data/doc/File.html +212 -0
- data/doc/ParseFasta.html +144 -0
- data/doc/Sequence.html +361 -0
- data/doc/_index.html +136 -0
- data/doc/class_list.html +54 -0
- data/doc/css/common.css +1 -0
- data/doc/css/full_list.css +57 -0
- data/doc/css/style.css +339 -0
- data/doc/file.README.html +161 -0
- data/doc/file_list.html +56 -0
- data/doc/frames.html +26 -0
- data/doc/index.html +161 -0
- data/doc/js/app.js +219 -0
- data/doc/js/full_list.js +178 -0
- data/doc/js/jquery.js +4 -0
- data/doc/method_list.html +71 -0
- data/doc/top-level-namespace.html +114 -0
- data/lib/parse_fasta/fasta_file.rb +46 -0
- data/lib/parse_fasta/sequence.rb +55 -0
- data/lib/parse_fasta/version.rb +19 -1
- data/lib/parse_fasta.rb +11 -21
- data/parse_fasta.gemspec +3 -0
- data/spec/lib/fasta_file_spec.rb +46 -0
- data/spec/lib/sequence_spec.rb +52 -0
- data/spec/spec_helper.rb +19 -0
- data/test_files/benchmark.rb +70 -0
- data/test_files/test.fa +9 -0
- metadata +75 -5
- data/LICENSE.txt +0 -22
- data/benchmark.rb +0 -22
checksums.yaml
CHANGED
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@@ -1,7 +1,7 @@
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1
1
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---
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2
2
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SHA1:
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3
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-
metadata.gz:
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4
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-
data.tar.gz:
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3
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+
metadata.gz: b296fad1f7f3a0758bfa9e3839eacfda5263d878
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4
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+
data.tar.gz: 4dffe3d99bf98969205b1a10fc5650b701676e67
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5
5
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SHA512:
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6
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metadata.gz:
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7
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data.tar.gz:
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6
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+
metadata.gz: 127538aa68f31e3e237b2a6625a3f66c7628bf19beaaff3a1bd351488f343a5f0af35fc0f64846feb62ffcac0c02c5bc9f0a05761a061c501c1e50e6dcaa27dc
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7
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+
data.tar.gz: aaa836672419f8ab54bf66e6ea5695599f7bc19f6a1d126b151c6865182d3cf4fc1023a68f833cee79d8c9a7c9180c5a0044656003a293868d4d248b43decadb
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