opentox-ruby-api-wrapper 1.1.0

data/lib/templates/config.yaml

@@ -0,0 +1,10 @@
+:base_dir: /home/ch/webservices
+:webserver: thin
+:services:
+# make sure to enter a full uri (including training slash)
+  opentox-compound:      "http://localhost:4000/"
+  opentox-feature:       "http://localhost:4001/"
+  opentox-dataset:       "http://localhost:4002/"
+  opentox-algorithm:     "http://localhost:4003/"
+  opentox-model:         "http://localhost:4004/"
+  #opentox-task:          "http://localhost:4005/"

data/lib/utils.rb

@@ -0,0 +1,9 @@
+module OpenTox
+	module Utils
+		# gauss kernel
+		def self.gauss(sim, sigma = 0.3) 
+			x = 1.0 - sim
+			Math.exp(-(x*x)/(2*sigma*sigma))
+		end
+	end
+end

metadata

@@ -0,0 +1,84 @@
+--- !ruby/object:Gem::Specification 
+name: opentox-ruby-api-wrapper
+version: !ruby/object:Gem::Version 
+  version: 1.1.0
+platform: ruby
+authors: 
+- Christoph Helma
+autorequire: 
+bindir: bin
+cert_chain: []
+
+date: 2009-10-06 00:00:00 +02:00
+default_executable: 
+dependencies: 
+- !ruby/object:Gem::Dependency 
+  name: technoweenie-rest-client
+  type: :runtime
+  version_requirement: 
+  version_requirements: !ruby/object:Gem::Requirement 
+    requirements: 
+    - - ">="
+      - !ruby/object:Gem::Version 
+        version: "0"
+    version: 
+description: Ruby wrapper for the OpenTox REST API (http://www.opentox.org)
+email: helma@in-silico.ch
+executables: []
+
+extensions: []
+
+extra_rdoc_files: 
+- LICENSE
+- README.rdoc
+files: 
+- LICENSE
+- README.rdoc
+- Rakefile
+- VERSION
+- lib/algorithm.rb
+- lib/compound.rb
+- lib/dataset.rb
+- lib/environment.rb
+- lib/feature.rb
+- lib/helper.rb
+- lib/model.rb
+- lib/opentox-ruby-api-wrapper.rb
+- lib/opentox.rb
+- lib/spork.rb
+- lib/task.rb
+- lib/tasks/opentox.rb
+- lib/tasks/redis.rb
+- lib/templates/config.ru
+- lib/templates/config.yaml
+- lib/utils.rb
+has_rdoc: true
+homepage: http://github.com/helma/opentox-ruby-api-wrapper
+licenses: []
+
+post_install_message: 
+rdoc_options: 
+- --charset=UTF-8
+require_paths: 
+- lib
+required_ruby_version: !ruby/object:Gem::Requirement 
+  requirements: 
+  - - ">="
+    - !ruby/object:Gem::Version 
+      version: "0"
+  version: 
+required_rubygems_version: !ruby/object:Gem::Requirement 
+  requirements: 
+  - - ">="
+    - !ruby/object:Gem::Version 
+      version: "0"
+  version: 
+requirements: []
+
+rubyforge_project: 
+rubygems_version: 1.3.5
+signing_key: 
+specification_version: 3
+summary: Ruby wrapper for the OpenTox REST API
+test_files: []
+