open_ehr 0.9.1 → 0.9.2
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- data/Gemfile.lock +22 -20
- data/README.rdoc +4 -3
- data/Rakefile +0 -5
- data/VERSION +1 -1
- data/lib/open_ehr/parser/adl_grammar.tt +30 -23
- data/lib/open_ehr/parser/cadl_grammar.tt +85 -59
- data/lib/open_ehr/parser/cadl_node.rb +18 -0
- data/lib/open_ehr/parser/dadl_grammar.tt +1 -1
- data/lib/open_ehr/parser/shared_token_grammar.tt +4 -4
- data/open_ehr.gemspec +104 -55
- data/spec/lib/open_ehr/parser/{adl → adl14}/adl-test-ENTRY.assumed_types.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/adl-test-ENTRY.basic_types.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/adl-test-ENTRY.basic_types_fail.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/adl-test-ENTRY.most_minimal.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/adl-test-ENTRY.structure_test1.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-SOME_TYPE.generic_type_basic.draft.adl +56 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-SOME_TYPE.generic_type_use_node.draft.adl +63 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-car.paths.test.adl +80 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-car.use_node.test.adl +87 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-composition.dv_coded_text.test.adl +29 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.archetype_bindings.test.adl +47 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.archetype_desc_missing_purpose.test.adl +45 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.archetype_description.test.adl +61 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.archetype_description2.test.adl +45 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.archetype_identification.test.adl +26 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.archetype_internal_ref.test.adl +36 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.archetype_internal_ref2.test.adl +36 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.archetype_language.test.adl +47 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.archetype_language_no_accreditation.test.adl +38 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.archetype_language_order_of_translation_details.test.adl +40 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.archetype_ontology.test.adl +25 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.archetype_slot.test.adl +40 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.archetype_slot.test2.adl +37 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.archetype_uncommonkeys.test.adl +29 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.basic_types.test.adl +272 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.c_code_phrase.test.adl +77 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.c_dv_ordinal.test.adl +66 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.c_dv_quantity_empty.test.adl +46 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.c_dv_quantity_full.test.adl +64 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.c_dv_quantity_full2.test.adl +64 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.c_dv_quantity_full3.test.adl +64 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.c_dv_quantity_item_units_only.test.adl +55 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.c_dv_quantity_list.test.adl +58 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.c_dv_quantity_property.test.adl +47 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.c_dv_quantity_reversed.test.adl +59 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.constraint_binding.test.adl +37 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.constraint_ref.test.adl +43 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.datetime.test.adl +183 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.domain_types.test.adl +97 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.durations.test.adl +111 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.empty_other_contributors.test.adl +42 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.missing_language.test.adl +23 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.mixed_node_types.draft.adl +61 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.most_minimal.test.adl +23 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.multi_language.test.adl +52 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.special_string.test.adl +88 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.structure_test1.test.adl +45 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.structure_test2.test.adl +45 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.term_binding.test.adl +37 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.term_binding2.test.adl +32 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.testtranslations.test.adl +83 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.translations_author_language.test.adl +34 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.translations_language_author.test.adl +34 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.unicode_BOM_support.test.adl +41 -0
- data/spec/lib/open_ehr/parser/adl14/adl-test-entry.unicode_support.test.adl +41 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-ACTION.imaging.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-ACTION.referral.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-CLUSTER.auscultation-chest.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/adl14/openEHR-EHR-CLUSTER.auscultation.v1.adl +48 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-CLUSTER.dimensions-circumference.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-CLUSTER.dimensions.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-CLUSTER.exam-abdomen.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-CLUSTER.exam-chest.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-CLUSTER.exam-fetus.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-CLUSTER.exam-generic-joint.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-CLUSTER.exam-generic-lymphnode.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-CLUSTER.exam-generic-mass.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-CLUSTER.exam-generic.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-CLUSTER.exam-nervous_system.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-CLUSTER.exam-uterine_cervix.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-CLUSTER.exam-uterus.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-COMPOSITION.discharge.v1draft.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-COMPOSITION.encounter.v1draft.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-EVALUATION.adverse.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/adl14/openEHR-EHR-EVALUATION.columna_vertebral.v1.adl +85 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-INSTRUCTION.medication.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-INSTRUCTION.referral.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-ITEM_TREE.Laboratory_request.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-ITEM_TREE.follow_up.v1draft.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-ITEM_TREE.imaging.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-ITEM_TREE.medication-formulation.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-ITEM_TREE.medication.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-ITEM_TREE.referral.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-OBSERVATION.apgar.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-OBSERVATION.blood_pressure.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-OBSERVATION.body_mass_index.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/adl14/openEHR-EHR-OBSERVATION.testassumedvalue.v1.adl +99 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-SECTION.findings.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-SECTION.reason_for_encounter.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-SECTION.summary.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/{adl → adl14}/openEHR-EHR-SECTION.vital_signs.v1.adl +0 -0
- data/spec/lib/open_ehr/parser/adl_parser_spec.rb +2 -2
- data/spec/lib/open_ehr/parser/adl_path_spec.rb +180 -0
- metadata +132 -83
- data/bin/adl_validator.rb +0 -84
- data/lib/open_ehr/parser/scanner/adl_scanner.rb +0 -819
- data/spec/lib/open_ehr/parser/adl/openEHR-EHR-CLUSTER.auscultation.v1.adl +0 -217
- data/spec/lib/open_ehr/parser/adl/openEHR-EHR-cadl_sample.v1.adl +0 -9
- data/spec/rcov.opts +0 -1
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archetype (adl_version=1.4)
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openEHR-EHR-CLUSTER.auscultation.v1
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concept
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[at0000] -- Auscultation
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language
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original_language = <[ISO_639-1::en]>
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description
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original_author = <
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["name"] = <"Sam Heard">
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["organisation"] = <"Ocean Informatics">
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["date"] = <"7/04/2007">
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["email"] = <"sam.heard@oceaninformatics.biz">
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>
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details = <
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["en"] = <
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language = <[ISO_639-1::en]>
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purpose = <"To record data found on examination by auscultation/listening">
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use = <"To be embedded in an openEHR-EHR-OBSERVATION.exam cluster to express findings determined by auscultation">
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keywords = <"auscultate", "listen", "auscultation", "listening", "bruit", "bowel sounds", "sounds">
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misuse = <"Not for use in any other context at present">
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lifecycle_state = <"OrganisationDraft">
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other_contributors = <"Heather Leslie", ...>
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definition
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CLUSTER[at0000] matches { -- Auscultation
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items cardinality matches {0..*; unordered} matches {
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CLUSTER[at0001] occurrences matches {0..1} matches { -- Normal Statements
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items cardinality matches {0..*; unordered} matches {
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ELEMENT[at0003] occurrences matches {0..*} matches { -- Normal Statement
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value matches {
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DV_CODED_TEXT matches {
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defining_code matches {
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[local::
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at0056, -- No murmur
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at0057, -- No bruit
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at0073, -- Normal bowel sounds
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at0085] -- No abnormality detected
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}
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}
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}
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}
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}
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ELEMENT[at0004] occurrences matches {0..1} matches { -- Clinical Description
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value matches {
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DV_TEXT matches {*}
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}
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}
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CLUSTER[at0002] occurrences matches {0..1} matches { -- Findings
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items cardinality matches {0..*; unordered} matches {
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CLUSTER[at0009] occurrences matches {0..1} matches { -- Bowel sounds
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items cardinality matches {0..*; unordered} matches {
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ELEMENT[at0074] occurrences matches {0..*} matches { -- Specific Findings
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value matches {
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DV_CODED_TEXT matches {
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defining_code matches {
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[local::
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at0078, -- Absent bowel sounds
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at0080, -- Increased bowel sounds
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at0081] -- Tinkling bowel sounds
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}
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}
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}
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}
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}
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CLUSTER[at0010] occurrences matches {0..1} matches { -- Vessel bruit
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items cardinality matches {0..*; unordered} matches {
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ELEMENT[at0088] matches { -- Vessel name
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value matches {
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DV_TEXT matches {*}
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}
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}
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}
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description = <"Findings on Auscultation">
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description = <"Group of findings about auscultation of the bowel">
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description = <"Site where finding is heard maximally">
|
|
153
|
-
text = <"Maximal Location">
|
|
154
|
-
>
|
|
155
|
-
["at0056"] = <
|
|
156
|
-
description = <"No murmur is heard">
|
|
157
|
-
text = <"No murmur">
|
|
158
|
-
>
|
|
159
|
-
["at0057"] = <
|
|
160
|
-
description = <"No bruit is heard">
|
|
161
|
-
text = <"No bruit">
|
|
162
|
-
>
|
|
163
|
-
["at0073"] = <
|
|
164
|
-
description = <"Bowel sounds are normal in intensity and character">
|
|
165
|
-
text = <"Normal bowel sounds">
|
|
166
|
-
>
|
|
167
|
-
["at0074"] = <
|
|
168
|
-
description = <"Specific auscultatory findings related to examination of the bowels">
|
|
169
|
-
text = <"Specific Findings">
|
|
170
|
-
>
|
|
171
|
-
["at0078"] = <
|
|
172
|
-
description = <"No bowel sounds can be heard">
|
|
173
|
-
text = <"Absent bowel sounds">
|
|
174
|
-
>
|
|
175
|
-
["at0079"] = <
|
|
176
|
-
description = <"Bowel sounds are less than normal">
|
|
177
|
-
text = <"Decreased bowel sounds">
|
|
178
|
-
>
|
|
179
|
-
["at0080"] = <
|
|
180
|
-
description = <"Bowel sounds are more intense than normal">
|
|
181
|
-
text = <"Increased bowel sounds">
|
|
182
|
-
>
|
|
183
|
-
["at0081"] = <
|
|
184
|
-
description = <"High pitched and very frequent bowel sounds can be heard">
|
|
185
|
-
text = <"Tinkling bowel sounds">
|
|
186
|
-
>
|
|
187
|
-
["at0085"] = <
|
|
188
|
-
description = <"Nothing abnormal on auscultation">
|
|
189
|
-
text = <"No abnormality detected">
|
|
190
|
-
>
|
|
191
|
-
["at0086"] = <
|
|
192
|
-
description = <"Auscultation in a particular site">
|
|
193
|
-
text = <"Localised auscultation">
|
|
194
|
-
>
|
|
195
|
-
["at0087"] = <
|
|
196
|
-
description = <"The site of the localised findings">
|
|
197
|
-
text = <"Site or region">
|
|
198
|
-
>
|
|
199
|
-
["at0088"] = <
|
|
200
|
-
description = <"The name of the vessel to which is being listened">
|
|
201
|
-
text = <"Vessel name">
|
|
202
|
-
>
|
|
203
|
-
["at0089"] = <
|
|
204
|
-
description = <"Recording of sounds of a different nature">
|
|
205
|
-
text = <"Other sounds">
|
|
206
|
-
>
|
|
207
|
-
["at0090"] = <
|
|
208
|
-
description = <"Description of other sounds">
|
|
209
|
-
text = <"Description">
|
|
210
|
-
>
|
|
211
|
-
["at0091"] = <
|
|
212
|
-
description = <"Description of the bruit">
|
|
213
|
-
text = <"Description">
|
|
214
|
-
>
|
|
215
|
-
>
|
|
216
|
-
>
|
|
217
|
-
>
|
|
@@ -1,9 +0,0 @@
|
|
|
1
|
-
SECTION[at0000] matches { -- Summary
|
|
2
|
-
items cardinality matches {0..*; unordered} matches {
|
|
3
|
-
allow_archetype EVALUATION occurrences matches {0..1} matches {
|
|
4
|
-
include
|
|
5
|
-
archetype_id/value matches {/clinical_synopsis\.v1/} archetype_id/value matches {/problem\.v1/} archetype_id/value matches {/problem-diagnosis\.v1/}
|
|
6
|
-
archetype_id/value matches {/problem-diagnosis-histological\.v1/}
|
|
7
|
-
archetype_id/value matches {/problem-genetic\.v1/}
|
|
8
|
-
}
|
|
9
|
-
}
|
data/spec/rcov.opts
DELETED
|
@@ -1 +0,0 @@
|
|
|
1
|
-
--exclude "spec/*,gems/*"
|