numo-narray 0.9.0.1-x86-mingw32
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- checksums.yaml +7 -0
- data/Gemfile +4 -0
- data/README.md +47 -0
- data/Rakefile +41 -0
- data/ext/numo/narray/SFMT-params.h +97 -0
- data/ext/numo/narray/SFMT-params19937.h +46 -0
- data/ext/numo/narray/SFMT.c +620 -0
- data/ext/numo/narray/SFMT.h +157 -0
- data/ext/numo/narray/array.c +525 -0
- data/ext/numo/narray/data.c +901 -0
- data/ext/numo/narray/depend.erb +33 -0
- data/ext/numo/narray/extconf.rb +117 -0
- data/ext/numo/narray/gen/bit.erb.c +811 -0
- data/ext/numo/narray/gen/cogen.rb +18 -0
- data/ext/numo/narray/gen/def/dcomplex.rb +32 -0
- data/ext/numo/narray/gen/def/dfloat.rb +30 -0
- data/ext/numo/narray/gen/def/int16.rb +29 -0
- data/ext/numo/narray/gen/def/int32.rb +29 -0
- data/ext/numo/narray/gen/def/int64.rb +29 -0
- data/ext/numo/narray/gen/def/int8.rb +29 -0
- data/ext/numo/narray/gen/def/robject.rb +30 -0
- data/ext/numo/narray/gen/def/scomplex.rb +32 -0
- data/ext/numo/narray/gen/def/sfloat.rb +30 -0
- data/ext/numo/narray/gen/def/uint16.rb +29 -0
- data/ext/numo/narray/gen/def/uint32.rb +29 -0
- data/ext/numo/narray/gen/def/uint64.rb +29 -0
- data/ext/numo/narray/gen/def/uint8.rb +29 -0
- data/ext/numo/narray/gen/dtype.erb.c +328 -0
- data/ext/numo/narray/gen/tmpl/accum.c +36 -0
- data/ext/numo/narray/gen/tmpl/accum_binary.c +75 -0
- data/ext/numo/narray/gen/tmpl/accum_index.c +58 -0
- data/ext/numo/narray/gen/tmpl/allocate.c +35 -0
- data/ext/numo/narray/gen/tmpl/aref.c +51 -0
- data/ext/numo/narray/gen/tmpl/aset.c +61 -0
- data/ext/numo/narray/gen/tmpl/binary.c +53 -0
- data/ext/numo/narray/gen/tmpl/binary2.c +55 -0
- data/ext/numo/narray/gen/tmpl/binary_s.c +34 -0
- data/ext/numo/narray/gen/tmpl/bit_binary.c +94 -0
- data/ext/numo/narray/gen/tmpl/bit_count.c +82 -0
- data/ext/numo/narray/gen/tmpl/bit_unary.c +77 -0
- data/ext/numo/narray/gen/tmpl/cast.c +37 -0
- data/ext/numo/narray/gen/tmpl/cast_array.c +79 -0
- data/ext/numo/narray/gen/tmpl/cast_numeric.c +22 -0
- data/ext/numo/narray/gen/tmpl/coerce_cast.c +8 -0
- data/ext/numo/narray/gen/tmpl/cond_binary.c +51 -0
- data/ext/numo/narray/gen/tmpl/cond_unary.c +45 -0
- data/ext/numo/narray/gen/tmpl/cum.c +42 -0
- data/ext/numo/narray/gen/tmpl/each.c +43 -0
- data/ext/numo/narray/gen/tmpl/each_with_index.c +64 -0
- data/ext/numo/narray/gen/tmpl/extract.c +23 -0
- data/ext/numo/narray/gen/tmpl/eye.c +91 -0
- data/ext/numo/narray/gen/tmpl/fill.c +38 -0
- data/ext/numo/narray/gen/tmpl/format.c +60 -0
- data/ext/numo/narray/gen/tmpl/format_to_a.c +47 -0
- data/ext/numo/narray/gen/tmpl/head.c +25 -0
- data/ext/numo/narray/gen/tmpl/inspect.c +16 -0
- data/ext/numo/narray/gen/tmpl/map_with_index.c +94 -0
- data/ext/numo/narray/gen/tmpl/median.c +44 -0
- data/ext/numo/narray/gen/tmpl/minmax.c +47 -0
- data/ext/numo/narray/gen/tmpl/poly.c +49 -0
- data/ext/numo/narray/gen/tmpl/pow.c +74 -0
- data/ext/numo/narray/gen/tmpl/powint.c +17 -0
- data/ext/numo/narray/gen/tmpl/qsort.c +149 -0
- data/ext/numo/narray/gen/tmpl/rand.c +33 -0
- data/ext/numo/narray/gen/tmpl/rand_norm.c +46 -0
- data/ext/numo/narray/gen/tmpl/robj_allocate.c +32 -0
- data/ext/numo/narray/gen/tmpl/seq.c +61 -0
- data/ext/numo/narray/gen/tmpl/set2.c +56 -0
- data/ext/numo/narray/gen/tmpl/sort.c +36 -0
- data/ext/numo/narray/gen/tmpl/sort_index.c +86 -0
- data/ext/numo/narray/gen/tmpl/store.c +31 -0
- data/ext/numo/narray/gen/tmpl/store_array.c +5 -0
- data/ext/numo/narray/gen/tmpl/store_from.c +53 -0
- data/ext/numo/narray/gen/tmpl/store_numeric.c +22 -0
- data/ext/numo/narray/gen/tmpl/to_a.c +41 -0
- data/ext/numo/narray/gen/tmpl/unary.c +58 -0
- data/ext/numo/narray/gen/tmpl/unary2.c +58 -0
- data/ext/numo/narray/gen/tmpl/unary_s.c +57 -0
- data/ext/numo/narray/index.c +822 -0
- data/ext/numo/narray/kwarg.c +79 -0
- data/ext/numo/narray/math.c +140 -0
- data/ext/numo/narray/narray.c +1539 -0
- data/ext/numo/narray/ndloop.c +1928 -0
- data/ext/numo/narray/numo/compat.h +23 -0
- data/ext/numo/narray/numo/intern.h +112 -0
- data/ext/numo/narray/numo/narray.h +411 -0
- data/ext/numo/narray/numo/ndloop.h +99 -0
- data/ext/numo/narray/numo/template.h +140 -0
- data/ext/numo/narray/numo/types/bit.h +19 -0
- data/ext/numo/narray/numo/types/complex.h +410 -0
- data/ext/numo/narray/numo/types/complex_macro.h +205 -0
- data/ext/numo/narray/numo/types/dcomplex.h +11 -0
- data/ext/numo/narray/numo/types/dfloat.h +12 -0
- data/ext/numo/narray/numo/types/float_def.h +34 -0
- data/ext/numo/narray/numo/types/float_macro.h +277 -0
- data/ext/numo/narray/numo/types/int16.h +12 -0
- data/ext/numo/narray/numo/types/int32.h +12 -0
- data/ext/numo/narray/numo/types/int64.h +12 -0
- data/ext/numo/narray/numo/types/int8.h +12 -0
- data/ext/numo/narray/numo/types/int_macro.h +34 -0
- data/ext/numo/narray/numo/types/robj_macro.h +218 -0
- data/ext/numo/narray/numo/types/robject.h +21 -0
- data/ext/numo/narray/numo/types/scomplex.h +11 -0
- data/ext/numo/narray/numo/types/sfloat.h +13 -0
- data/ext/numo/narray/numo/types/uint16.h +12 -0
- data/ext/numo/narray/numo/types/uint32.h +12 -0
- data/ext/numo/narray/numo/types/uint64.h +12 -0
- data/ext/numo/narray/numo/types/uint8.h +12 -0
- data/ext/numo/narray/numo/types/uint_macro.h +31 -0
- data/ext/numo/narray/numo/types/xint_macro.h +133 -0
- data/ext/numo/narray/rand.c +87 -0
- data/ext/numo/narray/step.c +506 -0
- data/ext/numo/narray/struct.c +872 -0
- data/lib/2.1/numo/narray.so +0 -0
- data/lib/2.2/numo/narray.so +0 -0
- data/lib/2.3/numo/narray.so +0 -0
- data/lib/erbpp/line_number.rb +126 -0
- data/lib/erbpp/narray_def.rb +338 -0
- data/lib/erbpp.rb +286 -0
- data/lib/numo/narray.rb +6 -0
- data/numo-narray.gemspec +35 -0
- data/spec/bit_spec.rb +93 -0
- data/spec/narray_spec.rb +249 -0
- metadata +238 -0
@@ -0,0 +1,901 @@
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/*
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data.c
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Numerical Array Extension for Ruby
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(C) Copyright 1999-2011,2013 by Masahiro TANAKA
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This program is free software.
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You can distribute/modify this program
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under the same terms as Ruby itself.
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NO WARRANTY.
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*/
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#include <ruby.h>
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#include "numo/narray.h"
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#include "numo/template.h"
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// ---------------------------------------------------------------------
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#define LOOP_UNARY_PTR(lp,proc) \
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{ \
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size_t i; \
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ssize_t s1, s2; \
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char *p1, *p2; \
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size_t *idx1, *idx2; \
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INIT_COUNTER(lp, i); \
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INIT_PTR_IDX(lp, 0, p1, s1, idx1); \
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INIT_PTR_IDX(lp, 1, p2, s2, idx2); \
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if (idx1) { \
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if (idx2) { \
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for (; i--;) { \
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proc((p1+*idx1), (p2+*idx2)); \
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idx1++; \
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idx2++; \
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} \
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} else { \
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for (; i--;) { \
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proc((p1+*idx1), p2); \
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idx1++; \
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p2 += s2; \
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} \
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} \
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} else { \
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if (idx2) { \
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for (; i--;) { \
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proc(p1, (p1+*idx2)); \
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p1 += s1; \
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idx2++; \
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} \
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} else { \
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for (; i--;) { \
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proc(p1, p2); \
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p1 += s1; \
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p2 += s2; \
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} \
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} \
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} \
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}
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#define m_memcpy(src,dst) memcpy(dst,src,e)
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void
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iter_copy_bytes(na_loop_t *const lp)
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{
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size_t e;
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e = lp->args[0].elmsz;
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LOOP_UNARY_PTR(lp,m_memcpy);
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}
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VALUE
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na_copy(VALUE self)
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{
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VALUE v;
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ndfunc_arg_in_t ain[1] = {{Qnil,0}};
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ndfunc_arg_out_t aout[1] = {{INT2FIX(0),0}};
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ndfunc_t ndf = { iter_copy_bytes, FULL_LOOP, 1, 1, ain, aout };
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v = na_ndloop(&ndf, 1, self);
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return v;
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}
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VALUE
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na_store(VALUE self, VALUE src)
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{
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return rb_funcall(self,rb_intern("store"),1,src);
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}
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// ---------------------------------------------------------------------
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#define m_swap_byte(q1,q2) \
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{ \
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size_t j; \
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memcpy(b1,q1,e); \
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for (j=0; j<e; j++) { \
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b2[e-1-j] = b1[j]; \
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} \
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memcpy(q2,b2,e); \
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}
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static void
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iter_swap_byte(na_loop_t *const lp)
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{
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char *b1, *b2;
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size_t e;
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e = lp->args[0].elmsz;
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b1 = ALLOCA_N(char, e);
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b2 = ALLOCA_N(char, e);
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LOOP_UNARY_PTR(lp,m_swap_byte);
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}
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static VALUE
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nary_swap_byte(VALUE self)
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{
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VALUE v;
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ndfunc_arg_in_t ain[1] = {{Qnil,0}};
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ndfunc_arg_out_t aout[1] = {{INT2FIX(0),0}};
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ndfunc_t ndf = { iter_swap_byte, FULL_LOOP|NDF_ACCEPT_BYTESWAP,
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1, 1, ain, aout };
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v = na_ndloop(&ndf, 1, self);
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if (self!=v) {
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na_copy_flags(self, v);
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}
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REVERSE_BYTE_SWAPPED(v);
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return v;
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}
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static VALUE
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nary_to_network(VALUE self)
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{
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if (TEST_NETWORK_ORDER(self)) {
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return self;
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}
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return rb_funcall(self, rb_intern("swap_byte"), 0);
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}
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static VALUE
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nary_to_vacs(VALUE self)
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{
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if (TEST_VACS_ORDER(self)) {
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return self;
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}
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return rb_funcall(self, rb_intern("swap_byte"), 0);
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}
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static VALUE
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nary_to_host(VALUE self)
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{
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if (TEST_HOST_ORDER(self)) {
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return self;
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}
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return rb_funcall(self, rb_intern("swap_byte"), 0);
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}
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static VALUE
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nary_to_swapped(VALUE self)
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{
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if (TEST_BYTE_SWAPPED(self)) {
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return self;
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}
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return rb_funcall(self, rb_intern("swap_byte"), 0);
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}
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//----------------------------------------------------------------------
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VALUE
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na_transpose_map(VALUE self, int *map)
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{
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int i, ndim;
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size_t *shape;
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stridx_t *stridx;
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narray_view_t *na;
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volatile VALUE view;
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view = na_make_view(self);
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GetNArrayView(view,na);
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ndim = na->base.ndim;
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shape = ALLOCA_N(size_t,ndim);
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stridx = ALLOCA_N(stridx_t,ndim);
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for (i=0; i<ndim; i++) {
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shape[i] = na->base.shape[i];
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stridx[i] = na->stridx[i];
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}
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for (i=0; i<ndim; i++) {
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na->base.shape[i] = shape[map[i]];
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na->stridx[i] = stridx[map[i]];
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}
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return view;
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}
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#define SWAP(a,b,tmp) {tmp=a;a=b;b=tmp;}
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VALUE
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na_transpose(int argc, VALUE *argv, VALUE self)
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{
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int ndim, *map, tmp;
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int row_major;
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int i, j, c, r;
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size_t len;
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ssize_t beg, step;
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volatile VALUE v, view;
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narray_t *na1;
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GetNArray(self,na1);
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ndim = na1->ndim;
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row_major = TEST_COLUMN_MAJOR( self );
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map = ALLOCA_N(int,ndim);
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for (i=0;i<ndim;i++) {
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map[i] = i;
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}
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if (argc==0) {
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SWAP(map[ndim-1], map[ndim-2], tmp);
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goto new_object;
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}
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if (argc==2) {
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if (TYPE(argv[0])==T_FIXNUM && TYPE(argv[1])==T_FIXNUM) {
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i = FIX2INT(argv[0]);
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j = FIX2INT(argv[1]);
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if (row_major) {
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i = ndim-1-i;
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j = ndim-1-j;
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}
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SWAP( map[i], map[j], tmp );
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goto new_object;
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}
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}
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for (i=argc,c=ndim-1; i;) {
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v = argv[--i];
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if (TYPE(v)==T_FIXNUM) {
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beg = FIX2INT(v);
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len = 1;
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step = 0;
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} else if (rb_obj_is_kind_of(v,rb_cRange) || rb_obj_is_kind_of(v,na_cStep)) {
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// write me
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nary_step_array_index(v, ndim, &len, &beg, &step);
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//printf("len=%d beg=%d step=%d\n",len,beg,step);
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}
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for (j=len; j; ) {
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r = beg + step*(--j);
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if (row_major) {
|
247
|
+
r = ndim-1-r;
|
248
|
+
}
|
249
|
+
if ( c < 0 ) {
|
250
|
+
rb_raise(rb_eArgError, "too many dims");
|
251
|
+
}
|
252
|
+
map[c--] = r;
|
253
|
+
//printf("r=%d\n",r);
|
254
|
+
}
|
255
|
+
}
|
256
|
+
|
257
|
+
new_object:
|
258
|
+
view = na_transpose_map(self,map);
|
259
|
+
return view;
|
260
|
+
}
|
261
|
+
|
262
|
+
//----------------------------------------------------------------------
|
263
|
+
|
264
|
+
/* private function for reshape */
|
265
|
+
static VALUE
|
266
|
+
na_reshape(int argc, VALUE *argv, VALUE self)
|
267
|
+
{
|
268
|
+
int i, unfixed=-1;
|
269
|
+
size_t total=1;
|
270
|
+
size_t *shape; //, *shape_save;
|
271
|
+
narray_t *na;
|
272
|
+
VALUE copy;
|
273
|
+
|
274
|
+
if (argc == 0) {
|
275
|
+
rb_raise(rb_eRuntimeError, "No argrument");
|
276
|
+
}
|
277
|
+
GetNArray(self,na);
|
278
|
+
if (NA_SIZE(na) == 0) {
|
279
|
+
rb_raise(rb_eRuntimeError, "cannot reshape empty array");
|
280
|
+
}
|
281
|
+
|
282
|
+
/* get shape from argument */
|
283
|
+
shape = ALLOCA_N(size_t,argc);
|
284
|
+
for (i=0; i<argc; ++i) {
|
285
|
+
switch(TYPE(argv[i])) {
|
286
|
+
case T_FIXNUM:
|
287
|
+
total *= shape[i] = NUM2INT(argv[i]);
|
288
|
+
break;
|
289
|
+
case T_NIL:
|
290
|
+
case T_TRUE:
|
291
|
+
unfixed = i;
|
292
|
+
break;
|
293
|
+
default:
|
294
|
+
rb_raise(rb_eArgError,"illegal type");
|
295
|
+
}
|
296
|
+
}
|
297
|
+
|
298
|
+
if (unfixed>=0) {
|
299
|
+
if (NA_SIZE(na) % total != 0)
|
300
|
+
rb_raise(rb_eArgError, "Total size size must be divisor");
|
301
|
+
shape[unfixed] = NA_SIZE(na) / total;
|
302
|
+
}
|
303
|
+
else if (total != NA_SIZE(na)) {
|
304
|
+
rb_raise(rb_eArgError, "Total size must be same");
|
305
|
+
}
|
306
|
+
|
307
|
+
copy = na_copy(self);
|
308
|
+
GetNArray(copy,na);
|
309
|
+
//shape_save = NA_SHAPE(na);
|
310
|
+
na_setup_shape(na,argc,shape);
|
311
|
+
//if (NA_SHAPE(na) != shape_save) {
|
312
|
+
// xfree(shape_save);
|
313
|
+
//}
|
314
|
+
return copy;
|
315
|
+
}
|
316
|
+
|
317
|
+
|
318
|
+
//----------------------------------------------------------------------
|
319
|
+
|
320
|
+
VALUE
|
321
|
+
na_flatten_dim(VALUE self, int sd)
|
322
|
+
{
|
323
|
+
int i, nd, fd;
|
324
|
+
size_t j;
|
325
|
+
size_t *c, *pos, *idx1, *idx2;
|
326
|
+
size_t stride;
|
327
|
+
size_t *shape, size;
|
328
|
+
stridx_t sdx;
|
329
|
+
narray_t *na;
|
330
|
+
narray_view_t *na1, *na2;
|
331
|
+
volatile VALUE view;
|
332
|
+
|
333
|
+
GetNArray(self,na);
|
334
|
+
nd = na->ndim;
|
335
|
+
|
336
|
+
if (sd<0 || sd>=nd) {
|
337
|
+
rb_bug("na_flaten_dim: start_dim (%d) out of range",sd);
|
338
|
+
}
|
339
|
+
|
340
|
+
// new shape
|
341
|
+
shape = ALLOCA_N(size_t,sd+1);
|
342
|
+
for (i=0; i<sd; i++) {
|
343
|
+
shape[i] = na->shape[i];
|
344
|
+
}
|
345
|
+
size = 1;
|
346
|
+
for (i=sd; i<nd; i++) {
|
347
|
+
size *= na->shape[i];
|
348
|
+
}
|
349
|
+
shape[sd] = size;
|
350
|
+
|
351
|
+
// new object
|
352
|
+
view = na_s_allocate_view(CLASS_OF(self));
|
353
|
+
na_copy_flags(self, view);
|
354
|
+
GetNArrayView(view, na2);
|
355
|
+
|
356
|
+
// new stride
|
357
|
+
na_setup_shape((narray_t*)na2, sd+1, shape);
|
358
|
+
na2->stridx = ALLOC_N(stridx_t,sd+1);
|
359
|
+
|
360
|
+
switch(na->type) {
|
361
|
+
case NARRAY_DATA_T:
|
362
|
+
case NARRAY_FILEMAP_T:
|
363
|
+
stride = na_get_elmsz(self);
|
364
|
+
for (i=sd+1; i--; ) {
|
365
|
+
//printf("data: i=%d stride=%d\n",i,stride);
|
366
|
+
SDX_SET_STRIDE(na2->stridx[i],stride);
|
367
|
+
stride *= shape[i];
|
368
|
+
}
|
369
|
+
na2->offset = 0;
|
370
|
+
na2->data = self;
|
371
|
+
break;
|
372
|
+
case NARRAY_VIEW_T:
|
373
|
+
GetNArrayView(self, na1);
|
374
|
+
na2->data = na1->data;
|
375
|
+
na2->offset = na1->offset;
|
376
|
+
for (i=0; i<sd; i++) {
|
377
|
+
if (SDX_IS_INDEX(na1->stridx[i])) {
|
378
|
+
idx1 = SDX_GET_INDEX(na1->stridx[i]);
|
379
|
+
idx2 = ALLOC_N(size_t, shape[i]);
|
380
|
+
for (j=0; j<shape[i]; j++) {
|
381
|
+
idx2[j] = idx1[j];
|
382
|
+
}
|
383
|
+
SDX_SET_INDEX(na2->stridx[i],idx2);
|
384
|
+
} else {
|
385
|
+
na2->stridx[i] = na1->stridx[i];
|
386
|
+
//printf("view: i=%d stridx=%d\n",i,SDX_GET_STRIDE(sdx));
|
387
|
+
}
|
388
|
+
}
|
389
|
+
// flat dimenion == last dimension
|
390
|
+
if (RTEST(na_check_ladder(self,sd))) {
|
391
|
+
//if (0) {
|
392
|
+
na2->stridx[sd] = na1->stridx[nd-1];
|
393
|
+
} else {
|
394
|
+
// set index
|
395
|
+
idx2 = ALLOC_N(size_t, shape[sd]);
|
396
|
+
SDX_SET_INDEX(na2->stridx[sd],idx2);
|
397
|
+
// init for md-loop
|
398
|
+
fd = nd-sd;
|
399
|
+
c = ALLOC_N(size_t, fd);
|
400
|
+
for (i=0; i<fd; i++) c[i]=0;
|
401
|
+
pos = ALLOC_N(size_t, fd+1);
|
402
|
+
pos[0] = 0;
|
403
|
+
// md-loop
|
404
|
+
for (i=j=0;;) {
|
405
|
+
for (; i<fd; i++) {
|
406
|
+
sdx = na1->stridx[i+sd];
|
407
|
+
if (SDX_IS_INDEX(sdx)) {
|
408
|
+
pos[i+1] = pos[i] + SDX_GET_INDEX(sdx)[c[i]];
|
409
|
+
} else {
|
410
|
+
pos[i+1] = pos[i] + SDX_GET_STRIDE(sdx)*c[i];
|
411
|
+
}
|
412
|
+
}
|
413
|
+
idx2[j++] = pos[i];
|
414
|
+
for (;;) {
|
415
|
+
if (i==0) goto loop_end;
|
416
|
+
i--;
|
417
|
+
c[i]++;
|
418
|
+
if (c[i] < na1->base.shape[i+sd]) break;
|
419
|
+
c[i] = 0;
|
420
|
+
}
|
421
|
+
}
|
422
|
+
loop_end:
|
423
|
+
xfree(pos);
|
424
|
+
xfree(c);
|
425
|
+
}
|
426
|
+
break;
|
427
|
+
}
|
428
|
+
return view;
|
429
|
+
}
|
430
|
+
|
431
|
+
VALUE
|
432
|
+
na_flatten(VALUE self)
|
433
|
+
{
|
434
|
+
return na_flatten_dim(self,0);
|
435
|
+
}
|
436
|
+
|
437
|
+
|
438
|
+
VALUE
|
439
|
+
na_flatten_by_reduce(int argc, VALUE *argv, VALUE self)
|
440
|
+
{
|
441
|
+
size_t sz_reduce=1;
|
442
|
+
int i, j, ndim;
|
443
|
+
int nd_reduce=0, nd_rest=0;
|
444
|
+
int *dim_reduce, *dim_rest;
|
445
|
+
int *map;
|
446
|
+
volatile VALUE view, reduce;
|
447
|
+
narray_t *na;
|
448
|
+
|
449
|
+
//puts("pass1");
|
450
|
+
//rb_p(self);
|
451
|
+
reduce = na_reduce_dimension(argc, argv, 1, &self);
|
452
|
+
//reduce = INT2FIX(1);
|
453
|
+
//rb_p(self);
|
454
|
+
//puts("pass2");
|
455
|
+
|
456
|
+
if (reduce==INT2FIX(0)) {
|
457
|
+
//puts("pass flatten_dim");
|
458
|
+
//rb_funcall(self,rb_intern("debug_info"),0);
|
459
|
+
//rb_p(self);
|
460
|
+
view = na_flatten_dim(self,0);
|
461
|
+
//rb_funcall(view,rb_intern("debug_info"),0);
|
462
|
+
//rb_p(view);
|
463
|
+
} else {
|
464
|
+
//printf("reduce=0x%x\n",NUM2INT(reduce));
|
465
|
+
GetNArray(self,na);
|
466
|
+
ndim = na->ndim;
|
467
|
+
if (ndim==0) {
|
468
|
+
rb_raise(rb_eStandardError,"cannot flatten scalar(dim-0 array)");
|
469
|
+
return Qnil;
|
470
|
+
}
|
471
|
+
map = ALLOC_N(int,ndim);
|
472
|
+
dim_reduce = ALLOC_N(int,ndim);
|
473
|
+
dim_rest = ALLOC_N(int,ndim);
|
474
|
+
for (i=0; i<ndim; i++) {
|
475
|
+
if (na_test_reduce( reduce, i )) {
|
476
|
+
sz_reduce *= na->shape[i];
|
477
|
+
//printf("i=%d, nd_reduce=%d, na->shape[i]=%ld\n", i, nd_reduce, na->shape[i]);
|
478
|
+
dim_reduce[nd_reduce++] = i;
|
479
|
+
} else {
|
480
|
+
//shape[nd_rest] = na->shape[i];
|
481
|
+
//sz_rest *= na->shape[i];
|
482
|
+
//printf("i=%d, nd_rest=%d, na->shape[i]=%ld\n", i, nd_rest, na->shape[i]);
|
483
|
+
dim_rest[nd_rest++] = i;
|
484
|
+
}
|
485
|
+
}
|
486
|
+
for (i=0; i<nd_rest; i++) {
|
487
|
+
map[i] = dim_rest[i];
|
488
|
+
//printf("dim_rest[i=%d]=%d\n",i,dim_rest[i]);
|
489
|
+
//printf("map[i=%d]=%d\n",i,map[i]);
|
490
|
+
}
|
491
|
+
for (j=0; j<nd_reduce; j++,i++) {
|
492
|
+
map[i] = dim_reduce[j];
|
493
|
+
//printf("dim_reduce[j=%d]=%d\n",j,dim_reduce[j]);
|
494
|
+
//printf("map[i=%d]=%d\n",i,map[i]);
|
495
|
+
}
|
496
|
+
xfree(dim_reduce);
|
497
|
+
xfree(dim_rest);
|
498
|
+
//for (i=0; i<ndim; i++) {
|
499
|
+
// printf("map[%d]=%d\n",i,map[i]);
|
500
|
+
//}
|
501
|
+
//puts("pass transpose_map");
|
502
|
+
view = na_transpose_map(self,map);
|
503
|
+
xfree(map);
|
504
|
+
//rb_p(view);
|
505
|
+
//rb_funcall(view,rb_intern("debug_print"),0);
|
506
|
+
|
507
|
+
//puts("pass flatten_dim");
|
508
|
+
view = na_flatten_dim(view,nd_rest);
|
509
|
+
//rb_funcall(view,rb_intern("debug_print"),0);
|
510
|
+
//rb_p(view);
|
511
|
+
}
|
512
|
+
return view;
|
513
|
+
}
|
514
|
+
|
515
|
+
|
516
|
+
//----------------------------------------------------------------------
|
517
|
+
|
518
|
+
#define MIN(a,b) (((a)<(b))?(a):(b))
|
519
|
+
|
520
|
+
/*
|
521
|
+
Returns a diagonal view of NArray
|
522
|
+
@overload diagonal([offset,axes])
|
523
|
+
@param [Integer] offset Diagonal offset from the main diagonal.
|
524
|
+
The default is 0. k>0 for diagonals above the main diagonal,
|
525
|
+
and k<0 for diagonals below the main diagonal.
|
526
|
+
@param [Array] axes Array of axes to be used as the 2-d sub-arrays
|
527
|
+
from which the diagonals should be taken. Defaults to last-two
|
528
|
+
axes ([-2,-1]).
|
529
|
+
@return [Numo::NArray] diagonal view of NArray.
|
530
|
+
@example
|
531
|
+
a = Numo::DFloat.new(4,5).seq
|
532
|
+
=> Numo::DFloat#shape=[4,5]
|
533
|
+
[[0, 1, 2, 3, 4],
|
534
|
+
[5, 6, 7, 8, 9],
|
535
|
+
[10, 11, 12, 13, 14],
|
536
|
+
[15, 16, 17, 18, 19]]
|
537
|
+
b = a.diagonal(1)
|
538
|
+
=> Numo::DFloat(view)#shape=[4]
|
539
|
+
[1, 7, 13, 19]
|
540
|
+
b.store(0)
|
541
|
+
a
|
542
|
+
=> Numo::DFloat#shape=[4,5]
|
543
|
+
[[0, 0, 2, 3, 4],
|
544
|
+
[5, 6, 0, 8, 9],
|
545
|
+
[10, 11, 12, 0, 14],
|
546
|
+
[15, 16, 17, 18, 0]]
|
547
|
+
b.store([1,2,3,4])
|
548
|
+
a
|
549
|
+
=> Numo::DFloat#shape=[4,5]
|
550
|
+
[[0, 1, 2, 3, 4],
|
551
|
+
[5, 6, 2, 8, 9],
|
552
|
+
[10, 11, 12, 3, 14],
|
553
|
+
[15, 16, 17, 18, 4]]
|
554
|
+
*/
|
555
|
+
VALUE
|
556
|
+
na_diagonal(int argc, VALUE *argv, VALUE self)
|
557
|
+
{
|
558
|
+
int i, k, nd;
|
559
|
+
size_t j;
|
560
|
+
size_t *idx0, *idx1, *diag_idx;
|
561
|
+
size_t *shape;
|
562
|
+
size_t diag_size;
|
563
|
+
ssize_t stride, stride0, stride1;
|
564
|
+
narray_t *na;
|
565
|
+
narray_view_t *na1, *na2;
|
566
|
+
VALUE view;
|
567
|
+
VALUE vofs=0, vaxes=0;
|
568
|
+
ssize_t kofs;
|
569
|
+
size_t k0, k1;
|
570
|
+
int ax[2];
|
571
|
+
|
572
|
+
// check arguments
|
573
|
+
if (argc>2) {
|
574
|
+
rb_raise(rb_eArgError,"too many arguments (%d for 0..2)",argc);
|
575
|
+
}
|
576
|
+
|
577
|
+
for (i=0; i<argc; i++) {
|
578
|
+
switch(TYPE(argv[i])) {
|
579
|
+
case T_FIXNUM:
|
580
|
+
if (vofs) {
|
581
|
+
rb_raise(rb_eArgError,"offset is given twice");
|
582
|
+
}
|
583
|
+
vofs = argv[i];
|
584
|
+
break;
|
585
|
+
case T_ARRAY:
|
586
|
+
if (vaxes) {
|
587
|
+
rb_raise(rb_eArgError,"axes-array is given twice");
|
588
|
+
}
|
589
|
+
vaxes = argv[i];
|
590
|
+
break;
|
591
|
+
}
|
592
|
+
}
|
593
|
+
|
594
|
+
if (vofs) {
|
595
|
+
kofs = NUM2SSIZE(vofs);
|
596
|
+
} else {
|
597
|
+
kofs = 0;
|
598
|
+
}
|
599
|
+
|
600
|
+
GetNArray(self,na);
|
601
|
+
nd = na->ndim;
|
602
|
+
if (nd < 2) {
|
603
|
+
rb_raise(nary_eDimensionError,"less than 2-d array");
|
604
|
+
}
|
605
|
+
|
606
|
+
if (vaxes) {
|
607
|
+
if (RARRAY_LEN(vaxes) != 2) {
|
608
|
+
rb_raise(rb_eArgError,"axes must be 2-element array");
|
609
|
+
}
|
610
|
+
ax[0] = NUM2INT(RARRAY_AREF(vaxes,0));
|
611
|
+
ax[1] = NUM2INT(RARRAY_AREF(vaxes,1));
|
612
|
+
if (ax[0]<-nd || ax[0]>=nd || ax[1]<-nd || ax[1]>=nd) {
|
613
|
+
rb_raise(rb_eArgError,"axis out of range:[%d,%d]",ax[0],ax[1]);
|
614
|
+
}
|
615
|
+
if (ax[0]<0) {ax[0] += nd;}
|
616
|
+
if (ax[1]<0) {ax[1] += nd;}
|
617
|
+
if (ax[0]==ax[1]) {
|
618
|
+
rb_raise(rb_eArgError,"same axes:[%d,%d]",ax[0],ax[1]);
|
619
|
+
}
|
620
|
+
} else {
|
621
|
+
ax[0] = nd-2;
|
622
|
+
ax[1] = nd-1;
|
623
|
+
}
|
624
|
+
|
625
|
+
// Diagonal offset from the main diagonal.
|
626
|
+
if (kofs >= 0) {
|
627
|
+
k0 = 0;
|
628
|
+
k1 = kofs;
|
629
|
+
if (k1 >= na->shape[ax[1]]) {
|
630
|
+
rb_raise(rb_eArgError,"invalid diagonal offset(%ld) for "
|
631
|
+
"last dimension size(%ld)",kofs,na->shape[ax[1]]);
|
632
|
+
}
|
633
|
+
} else {
|
634
|
+
k0 = -kofs;
|
635
|
+
k1 = 0;
|
636
|
+
if (k0 >= na->shape[ax[0]]) {
|
637
|
+
rb_raise(rb_eArgError,"invalid diagonal offset(=%ld) for "
|
638
|
+
"last-1 dimension size(%ld)",kofs,na->shape[ax[0]]);
|
639
|
+
}
|
640
|
+
}
|
641
|
+
|
642
|
+
diag_size = MIN(na->shape[ax[0]]-k0,na->shape[ax[1]]-k1);
|
643
|
+
|
644
|
+
// new shape
|
645
|
+
shape = ALLOCA_N(size_t,nd-1);
|
646
|
+
for (i=k=0; i<nd; i++) {
|
647
|
+
if (i != ax[0] && i != ax[1]) {
|
648
|
+
shape[k++] = na->shape[i];
|
649
|
+
}
|
650
|
+
}
|
651
|
+
shape[k] = diag_size;
|
652
|
+
|
653
|
+
// new object
|
654
|
+
view = na_s_allocate_view(CLASS_OF(self));
|
655
|
+
na_copy_flags(self, view);
|
656
|
+
GetNArrayView(view, na2);
|
657
|
+
|
658
|
+
// new stride
|
659
|
+
na_setup_shape((narray_t*)na2, nd-1, shape);
|
660
|
+
na2->stridx = ALLOC_N(stridx_t, nd-1);
|
661
|
+
|
662
|
+
switch(na->type) {
|
663
|
+
case NARRAY_DATA_T:
|
664
|
+
case NARRAY_FILEMAP_T:
|
665
|
+
na2->offset = 0;
|
666
|
+
na2->data = self;
|
667
|
+
stride = stride0 = stride1 = na_get_elmsz(self);
|
668
|
+
for (i=nd,k=nd-2; i--; ) {
|
669
|
+
if (i==ax[1]) {
|
670
|
+
stride1 = stride;
|
671
|
+
if (kofs > 0) {
|
672
|
+
na2->offset = kofs*stride;
|
673
|
+
}
|
674
|
+
} else if (i==ax[0]) {
|
675
|
+
stride0 = stride;
|
676
|
+
if (kofs < 0) {
|
677
|
+
na2->offset = (-kofs)*stride;
|
678
|
+
}
|
679
|
+
} else {
|
680
|
+
SDX_SET_STRIDE(na2->stridx[--k],stride);
|
681
|
+
}
|
682
|
+
stride *= na->shape[i];
|
683
|
+
}
|
684
|
+
SDX_SET_STRIDE(na2->stridx[nd-2],stride0+stride1);
|
685
|
+
break;
|
686
|
+
|
687
|
+
case NARRAY_VIEW_T:
|
688
|
+
GetNArrayView(self, na1);
|
689
|
+
na2->data = na1->data;
|
690
|
+
na2->offset = na1->offset;
|
691
|
+
for (i=k=0; i<nd; i++) {
|
692
|
+
if (i != ax[0] && i != ax[1]) {
|
693
|
+
if (SDX_IS_INDEX(na1->stridx[i])) {
|
694
|
+
idx0 = SDX_GET_INDEX(na1->stridx[i]);
|
695
|
+
idx1 = ALLOC_N(size_t, na->shape[i]);
|
696
|
+
for (j=0; j<na->shape[i]; j++) {
|
697
|
+
idx1[j] = idx0[j];
|
698
|
+
}
|
699
|
+
SDX_SET_INDEX(na2->stridx[k],idx1);
|
700
|
+
} else {
|
701
|
+
na2->stridx[k] = na1->stridx[i];
|
702
|
+
}
|
703
|
+
k++;
|
704
|
+
}
|
705
|
+
}
|
706
|
+
if (SDX_IS_INDEX(na1->stridx[ax[0]])) {
|
707
|
+
idx0 = SDX_GET_INDEX(na1->stridx[ax[0]]);
|
708
|
+
diag_idx = ALLOC_N(size_t, diag_size);
|
709
|
+
if (SDX_IS_INDEX(na1->stridx[ax[1]])) {
|
710
|
+
idx1 = SDX_GET_INDEX(na1->stridx[ax[1]]);
|
711
|
+
for (j=0; j<diag_size; j++) {
|
712
|
+
diag_idx[j] = idx0[j+k0] + idx1[j+k1];
|
713
|
+
}
|
714
|
+
} else {
|
715
|
+
stride1 = SDX_GET_STRIDE(na1->stridx[ax[1]]);
|
716
|
+
for (j=0; j<diag_size; j++) {
|
717
|
+
diag_idx[j] = idx0[j+k0] + stride1*(j+k1);
|
718
|
+
}
|
719
|
+
}
|
720
|
+
SDX_SET_INDEX(na2->stridx[nd-2],diag_idx);
|
721
|
+
} else {
|
722
|
+
stride0 = SDX_GET_STRIDE(na1->stridx[ax[0]]);
|
723
|
+
if (SDX_IS_INDEX(na1->stridx[ax[1]])) {
|
724
|
+
idx1 = SDX_GET_INDEX(na1->stridx[ax[1]]);
|
725
|
+
diag_idx = ALLOC_N(size_t, diag_size);
|
726
|
+
for (j=0; j<diag_size; j++) {
|
727
|
+
diag_idx[j] = stride0*(j+k0) + idx1[j+k1];
|
728
|
+
}
|
729
|
+
SDX_SET_INDEX(na2->stridx[nd-2],diag_idx);
|
730
|
+
} else {
|
731
|
+
stride1 = SDX_GET_STRIDE(na1->stridx[ax[1]]);
|
732
|
+
na2->offset += stride0*k0 + stride1*k1;
|
733
|
+
SDX_SET_STRIDE(na2->stridx[nd-2],stride0+stride1);
|
734
|
+
}
|
735
|
+
}
|
736
|
+
break;
|
737
|
+
}
|
738
|
+
return view;
|
739
|
+
}
|
740
|
+
|
741
|
+
//----------------------------------------------------------------------
|
742
|
+
|
743
|
+
|
744
|
+
#ifdef SWAP
|
745
|
+
#undef SWAP
|
746
|
+
#endif
|
747
|
+
#define SWAP(a,b,t) {t=a;a=b;b=t;}
|
748
|
+
|
749
|
+
static VALUE
|
750
|
+
na_new_dimension_for_dot(VALUE self, int pos, int len, bool transpose)
|
751
|
+
{
|
752
|
+
int i, k, nd;
|
753
|
+
size_t j;
|
754
|
+
size_t *idx1, *idx2;
|
755
|
+
size_t *shape;
|
756
|
+
ssize_t stride;
|
757
|
+
narray_t *na;
|
758
|
+
narray_view_t *na1, *na2;
|
759
|
+
size_t shape_n;
|
760
|
+
stridx_t stridx_n;
|
761
|
+
volatile VALUE view;
|
762
|
+
|
763
|
+
GetNArray(self,na);
|
764
|
+
nd = na->ndim;
|
765
|
+
|
766
|
+
view = na_s_allocate_view(CLASS_OF(self));
|
767
|
+
|
768
|
+
na_copy_flags(self, view);
|
769
|
+
GetNArrayView(view, na2);
|
770
|
+
|
771
|
+
// new dimension
|
772
|
+
if (pos < 0) pos += nd;
|
773
|
+
if (pos > nd || pos < 0) {
|
774
|
+
rb_raise(rb_eRangeError,"new dimension is out of range");
|
775
|
+
}
|
776
|
+
nd += len;
|
777
|
+
shape = ALLOCA_N(size_t,nd);
|
778
|
+
i = k = 0;
|
779
|
+
while (i < nd) {
|
780
|
+
if (i == pos) {
|
781
|
+
for (; len; len--) {
|
782
|
+
shape[i++] = 1;
|
783
|
+
}
|
784
|
+
pos = -1; // new axis done
|
785
|
+
} else {
|
786
|
+
shape[i++] = na->shape[k++];
|
787
|
+
}
|
788
|
+
}
|
789
|
+
|
790
|
+
na_setup_shape((narray_t*)na2, nd, shape);
|
791
|
+
na2->stridx = ALLOC_N(stridx_t,nd);
|
792
|
+
|
793
|
+
switch(na->type) {
|
794
|
+
case NARRAY_DATA_T:
|
795
|
+
case NARRAY_FILEMAP_T:
|
796
|
+
stride = na_get_elmsz(self);
|
797
|
+
for (i=nd; i--;) {
|
798
|
+
SDX_SET_STRIDE(na2->stridx[i],stride);
|
799
|
+
stride *= shape[i];
|
800
|
+
}
|
801
|
+
na2->offset = 0;
|
802
|
+
na2->data = self;
|
803
|
+
break;
|
804
|
+
case NARRAY_VIEW_T:
|
805
|
+
GetNArrayView(self, na1);
|
806
|
+
for (i=0; i<nd; i++) {
|
807
|
+
if (SDX_IS_INDEX(na1->stridx[i])) {
|
808
|
+
idx1 = SDX_GET_INDEX(na1->stridx[i]);
|
809
|
+
idx2 = ALLOC_N(size_t,na1->base.shape[i]);
|
810
|
+
for (j=0; j<na1->base.shape[i]; j++) {
|
811
|
+
idx2[j] = idx1[j];
|
812
|
+
}
|
813
|
+
SDX_SET_INDEX(na2->stridx[i],idx2);
|
814
|
+
} else {
|
815
|
+
na2->stridx[i] = na1->stridx[i];
|
816
|
+
}
|
817
|
+
}
|
818
|
+
na2->offset = na1->offset;
|
819
|
+
na2->data = na1->data;
|
820
|
+
break;
|
821
|
+
}
|
822
|
+
|
823
|
+
if (transpose) {
|
824
|
+
SWAP(na2->base.shape[nd-1], na2->base.shape[nd-2], shape_n);
|
825
|
+
SWAP(na2->stridx[nd-1], na2->stridx[nd-2], stridx_n);
|
826
|
+
}
|
827
|
+
|
828
|
+
return view;
|
829
|
+
}
|
830
|
+
|
831
|
+
|
832
|
+
//----------------------------------------------------------------------
|
833
|
+
|
834
|
+
/*
|
835
|
+
* call-seq:
|
836
|
+
* narray.dot(other) => narray
|
837
|
+
*
|
838
|
+
* Returns dot product.
|
839
|
+
*
|
840
|
+
*/
|
841
|
+
|
842
|
+
static VALUE
|
843
|
+
numo_na_dot(VALUE self, VALUE other)
|
844
|
+
{
|
845
|
+
VALUE test, sym_mulsum;
|
846
|
+
volatile VALUE a1=self, a2=other;
|
847
|
+
ID id_mulsum;
|
848
|
+
narray_t *na1, *na2;
|
849
|
+
|
850
|
+
id_mulsum = rb_intern("mulsum");
|
851
|
+
sym_mulsum = ID2SYM(id_mulsum);
|
852
|
+
test = rb_funcall(a1, rb_intern("respond_to?"), 1, sym_mulsum);
|
853
|
+
if (!RTEST(test)) {
|
854
|
+
rb_raise(rb_eNoMethodError,"requires mulsum method for dot method");
|
855
|
+
}
|
856
|
+
GetNArray(a1,na1);
|
857
|
+
GetNArray(a2,na2);
|
858
|
+
if (na2->ndim > 1) {
|
859
|
+
// insert new axis [ ..., last-1-dim, newaxis*other.ndim, last-dim ]
|
860
|
+
a1 = na_new_dimension_for_dot(a1, na1->ndim-1, na2->ndim-1, 0);
|
861
|
+
// insert & transpose [ newaxis*self.ndim, ..., last-dim, last-1-dim ]
|
862
|
+
a2 = na_new_dimension_for_dot(a2, 0, na1->ndim-1, 1);
|
863
|
+
}
|
864
|
+
return rb_funcall(a1,rb_intern("mulsum"),2,a2,INT2FIX(-1));
|
865
|
+
}
|
866
|
+
|
867
|
+
|
868
|
+
void
|
869
|
+
Init_nary_data()
|
870
|
+
{
|
871
|
+
rb_define_method(cNArray, "copy", na_copy, 0);
|
872
|
+
|
873
|
+
rb_define_method(cNArray, "flatten", na_flatten, 0);
|
874
|
+
rb_define_method(cNArray, "transpose", na_transpose, -1);
|
875
|
+
|
876
|
+
rb_define_method(cNArray, "reshape", na_reshape,-1);
|
877
|
+
/*
|
878
|
+
rb_define_method(cNArray, "reshape!", na_reshape_bang,-1);
|
879
|
+
rb_define_alias(cNArray, "shape=","reshape!");
|
880
|
+
*/
|
881
|
+
rb_define_method(cNArray, "diagonal", na_diagonal,-1);
|
882
|
+
|
883
|
+
rb_define_method(cNArray, "swap_byte", nary_swap_byte, 0);
|
884
|
+
#ifdef DYNAMIC_ENDIAN
|
885
|
+
#else
|
886
|
+
#ifdef WORDS_BIGENDIAN
|
887
|
+
#else // LITTLE_ENDIAN
|
888
|
+
rb_define_alias(cNArray, "hton", "swap_byte");
|
889
|
+
rb_define_alias(cNArray, "hton", "swap_byte");
|
890
|
+
rb_define_alias(cNArray, "network_order?", "byte_swapped?");
|
891
|
+
rb_define_alias(cNArray, "little_endian?", "host_order?");
|
892
|
+
rb_define_alias(cNArray, "vacs_order?", "host_order?");
|
893
|
+
#endif
|
894
|
+
#endif
|
895
|
+
rb_define_method(cNArray, "to_network", nary_to_network, 0);
|
896
|
+
rb_define_method(cNArray, "to_vacs", nary_to_vacs, 0);
|
897
|
+
rb_define_method(cNArray, "to_host", nary_to_host, 0);
|
898
|
+
rb_define_method(cNArray, "to_swapped", nary_to_swapped, 0);
|
899
|
+
|
900
|
+
rb_define_method(cNArray, "dot", numo_na_dot, 1);
|
901
|
+
}
|