niso-jats 0.1.1

data/lib/niso/jats/overline.rb

@@ -0,0 +1,61 @@
+# frozen_string_literal: true
+
+module Niso
+  module Jats
+    class Overline < Lutaml::Model::Serializable
+      include BasicText
+
+      attribute :content, :string
+      attribute :id, :string
+      attribute :specific_use, :string
+      attribute :toggle, :string
+
+      xml do
+        root "overline"
+
+        map_content to: :content
+        map_attribute "id", to: :id
+        map_attribute "specific-use", to: :specific_use
+        map_attribute "toggle", to: :toggle
+        map_element "email", to: :email
+        map_element "ext-link", to: :ext_link
+        map_element "uri", to: :uri
+        map_element "inline-supplementary-material",
+                    to: :inline_supplementary_material
+        map_element "related-article", to: :related_article
+        map_element "related-object", to: :related_object
+        map_element "bold", to: :bold
+        map_element "fixed-case", to: :fixed_case
+        map_element "italic", to: :italic
+        map_element "monospace", to: :monospace
+        map_element "overline", to: :overline
+        map_element "roman", to: :roman
+        map_element "sans-serif", to: :sans_serif
+        map_element "sc", to: :sc
+        map_element "strike", to: :strike
+        map_element "underline", to: :underline
+        map_element "ruby", to: :ruby
+        map_element "alternatives", to: :alternatives
+        map_element "inline-graphic", to: :inline_graphic
+        map_element "inline-media", to: :inline_media
+        map_element "private-char", to: :private_char
+        map_element "chem-struct", to: :chem_struct
+        map_element "inline-formula", to: :inline_formula
+        map_element "tex-math", to: :tex_math
+        map_element "mml-math", to: :mml_math
+        map_element "abbrev", to: :abbrev
+        map_element "index-term", to: :index_term
+        map_element "index-term-range-end", to: :index_term_range_end
+        map_element "milestone-end", to: :milestone_end
+        map_element "milestone-start", to: :milestone_start
+        map_element "named-content", to: :named_content
+        map_element "styled-content", to: :styled_content
+        map_element "fn", to: :fn
+        map_element "target", to: :target
+        map_element "xref", to: :xref
+        map_element "sub", to: :sub
+        map_element "sup", to: :sup
+      end
+    end
+  end
+end

data/lib/niso/jats/overline_end.rb

@@ -0,0 +1,19 @@
+# frozen_string_literal: true
+
+module Niso
+  module Jats
+    class OverlineEnd < Lutaml::Model::Serializable
+      attribute :id, :string
+      attribute :rid, :string
+      attribute :specific_use, :string
+
+      xml do
+        root "overline-end"
+
+        map_attribute "id", to: :id
+        map_attribute "rid", to: :rid
+        map_attribute "specific-use", to: :specific_use
+      end
+    end
+  end
+end

data/lib/niso/jats/overline_start.rb

@@ -0,0 +1,17 @@
+# frozen_string_literal: true
+
+module Niso
+  module Jats
+    class OverlineStart < Lutaml::Model::Serializable
+      attribute :id, :string
+      attribute :specific_use, :string
+
+      xml do
+        root "overline-start"
+
+        map_attribute "id", to: :id
+        map_attribute "specific-use", to: :specific_use
+      end
+    end
+  end
+end

data/lib/niso/jats/page_count.rb

@@ -0,0 +1,17 @@
+# frozen_string_literal: true
+
+module Niso
+  module Jats
+    class PageCount < Lutaml::Model::Serializable
+      attribute :count, :string
+      attribute :id, :string
+
+      xml do
+        root "page-count"
+
+        map_attribute "count", to: :count
+        map_attribute "id", to: :id
+      end
+    end
+  end
+end

data/lib/niso/jats/page_range.rb

@@ -0,0 +1,23 @@
+# frozen_string_literal: true
+
+module Niso
+  module Jats
+    class PageRange < Lutaml::Model::Serializable
+      attribute :content, :string
+      attribute :content_type, :string
+      attribute :id, :string
+      attribute :specific_use, :string
+      attribute :lang, :string
+
+      xml do
+        root "page-range"
+
+        map_content to: :content
+        map_attribute "content-type", to: :content_type
+        map_attribute "id", to: :id
+        map_attribute "specific-use", to: :specific_use
+        map_attribute "lang", to: :lang, namespace: "http://www.w3.org/XML/1998/namespace", prefix: "xml"
+      end
+    end
+  end
+end

data/lib/niso/jats/paragraph.rb

@@ -0,0 +1,169 @@
+# frozen_string_literal: true
+
+module Niso
+  module Jats
+    class Paragraph < Lutaml::Model::Serializable
+      attribute :content, :string
+      attribute :content_type, :string
+      attribute :id, :string
+      attribute :specific_use, :string
+      attribute :lang, :string
+      attribute :email, Email, collection: true
+      attribute :ext_link, ExtLink, collection: true
+      attribute :uri, Uri, collection: true
+      attribute :inline_supplementary_material, InlineSupplementaryMaterial,
+                collection: true
+      attribute :related_article, RelatedArticle, collection: true
+      attribute :related_object, RelatedObject, collection: true
+      attribute :address, Address, collection: true
+      attribute :alternatives, Alternatives, collection: true
+      attribute :answer, Answer, collection: true
+      attribute :answer_set, AnswerSet, collection: true
+      attribute :array, Array, collection: true
+      attribute :block_alternatives, BlockAlternatives, collection: true
+      attribute :boxed_text, BoxedText, collection: true
+      attribute :chem_struct_wrap, ChemStructWrap, collection: true
+      attribute :code, Code, collection: true
+      attribute :explanation, Explanation, collection: true
+      attribute :fig, Fig, collection: true
+      attribute :fig_group, FigGroup, collection: true
+      attribute :graphic, Graphic, collection: true
+      attribute :media, Media, collection: true
+      attribute :preformat, Preformat, collection: true
+      attribute :question, Question, collection: true
+      attribute :question_wrap, QuestionWrap, collection: true
+      attribute :question_wrap_group, QuestionWrapGroup, collection: true
+      attribute :supplementary_material, SupplementaryMaterial, collection: true
+      attribute :table_wrap, TableWrap, collection: true
+      attribute :table_wrap_group, TableWrapGroup, collection: true
+      attribute :disp_formula, DispFormula, collection: true
+      attribute :disp_formula_group, DispFormulaGroup, collection: true
+      attribute :citation_alternatives, CitationAlternatives, collection: true
+      attribute :element_citation, ElementCitation, collection: true
+      attribute :mixed_citation, MixedCitation, collection: true
+      attribute :nlm_citation, NlmCitation, collection: true
+      attribute :bold, Bold, collection: true
+      attribute :fixed_case, FixedCase, collection: true
+      attribute :italic, Italic, collection: true
+      attribute :monospace, Monospace, collection: true
+      attribute :overline, Overline, collection: true
+      attribute :roman, Roman, collection: true
+      attribute :sans_serif, SansSerif, collection: true
+      attribute :sc, Sc, collection: true
+      attribute :strike, Strike, collection: true
+      attribute :underline, Underline, collection: true
+      attribute :ruby, Ruby, collection: true
+      attribute :award_id, AwardId, collection: true
+      attribute :funding_source, FundingSource, collection: true
+      attribute :open_access, OpenAccess, collection: true
+      attribute :chem_struct, ChemStruct, collection: true
+      attribute :inline_formula, InlineFormula, collection: true
+      attribute :inline_graphic, InlineGraphic, collection: true
+      attribute :inline_media, InlineMedia, collection: true
+      attribute :private_char, PrivateChar, collection: true
+      attribute :def_list, DefList, collection: true
+      attribute :list, List, collection: true
+      attribute :tex_math, TexMath, collection: true
+      attribute :mml_math, :string, collection: true
+      attribute :abbrev, Abbrev, collection: true
+      attribute :index_term, IndexTerm, collection: true
+      attribute :index_term_range_end, IndexTermRangeEnd, collection: true
+      attribute :milestone_end, MilestoneEnd, collection: true
+      attribute :milestone_start, MilestoneStart, collection: true
+      attribute :named_content, NamedContent, collection: true
+      attribute :styled_content, StyledContent, collection: true
+      attribute :disp_quote, DispQuote, collection: true
+      attribute :speech, Speech, collection: true
+      attribute :statement, Statement, collection: true
+      attribute :verse_group, VerseGroup, collection: true
+      attribute :fn, Fn, collection: true
+      attribute :target, Target, collection: true
+      attribute :xref, Xref, collection: true
+      attribute :sub, Sub, collection: true
+      attribute :sup, Sup, collection: true
+
+      xml do
+        root "p", mixed: true
+
+        map_content to: :content
+        map_attribute "content-type", to: :content_type
+        map_attribute "id", to: :id
+        map_attribute "specific-use", to: :specific_use
+        map_attribute "lang", to: :lang, namespace: "http://www.w3.org/XML/1998/namespace", prefix: "xml"
+        map_element "email", to: :email
+        map_element "ext-link", to: :ext_link
+        map_element "uri", to: :uri
+        map_element "inline-supplementary-material",
+                    to: :inline_supplementary_material
+        map_element "related-article", to: :related_article
+        map_element "related-object", to: :related_object
+        map_element "address", to: :address
+        map_element "alternatives", to: :alternatives
+        map_element "answer", to: :answer
+        map_element "answer-set", to: :answer_set
+        map_element "array", to: :array
+        map_element "block-alternatives", to: :block_alternatives
+        map_element "boxed-text", to: :boxed_text
+        map_element "chem-struct-wrap", to: :chem_struct_wrap
+        map_element "code", to: :code
+        map_element "explanation", to: :explanation
+        map_element "fig", to: :fig
+        map_element "fig-group", to: :fig_group
+        map_element "graphic", to: :graphic
+        map_element "media", to: :media
+        map_element "preformat", to: :preformat
+        map_element "question", to: :question
+        map_element "question-wrap", to: :question_wrap
+        map_element "question-wrap-group", to: :question_wrap_group
+        map_element "supplementary-material", to: :supplementary_material
+        map_element "table-wrap", to: :table_wrap
+        map_element "table-wrap-group", to: :table_wrap_group
+        map_element "disp-formula", to: :disp_formula
+        map_element "disp-formula-group", to: :disp_formula_group
+        map_element "citation-alternatives", to: :citation_alternatives
+        map_element "element-citation", to: :element_citation
+        map_element "mixed-citation", to: :mixed_citation
+        map_element "nlm-citation", to: :nlm_citation
+        map_element "bold", to: :bold
+        map_element "fixed-case", to: :fixed_case
+        map_element "italic", to: :italic
+        map_element "monospace", to: :monospace
+        map_element "overline", to: :overline
+        map_element "roman", to: :roman
+        map_element "sans-serif", to: :sans_serif
+        map_element "sc", to: :sc
+        map_element "strike", to: :strike
+        map_element "underline", to: :underline
+        map_element "ruby", to: :ruby
+        map_element "award-id", to: :award_id
+        map_element "funding-source", to: :funding_source
+        map_element "open-access", to: :open_access
+        map_element "chem-struct", to: :chem_struct
+        map_element "inline-formula", to: :inline_formula
+        map_element "inline-graphic", to: :inline_graphic
+        map_element "inline-media", to: :inline_media
+        map_element "private-char", to: :private_char
+        map_element "def-list", to: :def_list
+        map_element "list", to: :list
+        map_element "tex-math", to: :tex_math
+        map_element "mml-math", to: :mml_math
+        map_element "abbrev", to: :abbrev
+        map_element "index-term", to: :index_term
+        map_element "index-term-range-end", to: :index_term_range_end
+        map_element "milestone-end", to: :milestone_end
+        map_element "milestone-start", to: :milestone_start
+        map_element "named-content", to: :named_content
+        map_element "styled-content", to: :styled_content
+        map_element "disp-quote", to: :disp_quote
+        map_element "speech", to: :speech
+        map_element "statement", to: :statement
+        map_element "verse-group", to: :verse_group
+        map_element "fn", to: :fn
+        map_element "target", to: :target
+        map_element "xref", to: :xref
+        map_element "sub", to: :sub
+        map_element "sup", to: :sup
+      end
+    end
+  end
+end

data/lib/niso/jats/part_title.rb

@@ -0,0 +1,81 @@
+# frozen_string_literal: true
+
+module Niso
+  module Jats
+    class PartTitle < Lutaml::Model::Serializable
+      attribute :content, :string
+      attribute :id, :string
+      attribute :specific_use, :string
+      attribute :lang, :string
+      attribute :abbrev, Abbrev, collection: true
+      attribute :email, Email, collection: true
+      attribute :ext_link, ExtLink, collection: true
+      attribute :uri, Uri, collection: true
+      attribute :bold, Bold, collection: true
+      attribute :fixed_case, FixedCase, collection: true
+      attribute :italic, Italic, collection: true
+      attribute :monospace, Monospace, collection: true
+      attribute :overline, Overline, collection: true
+      attribute :roman, Roman, collection: true
+      attribute :sans_serif, SansSerif, collection: true
+      attribute :sc, Sc, collection: true
+      attribute :strike, Strike, collection: true
+      attribute :underline, Underline, collection: true
+      attribute :ruby, Ruby, collection: true
+      attribute :alternatives, Alternatives, collection: true
+      attribute :inline_graphic, InlineGraphic, collection: true
+      attribute :inline_media, InlineMedia, collection: true
+      attribute :private_char, PrivateChar, collection: true
+      attribute :chem_struct, ChemStruct, collection: true
+      attribute :inline_formula, InlineFormula, collection: true
+      attribute :tex_math, TexMath, collection: true
+      attribute :mml_math, :string, collection: true
+      attribute :named_content, NamedContent, collection: true
+      attribute :styled_content, StyledContent, collection: true
+      attribute :fn, Fn, collection: true
+      attribute :target, Target, collection: true
+      attribute :xref, Xref, collection: true
+      attribute :sub, Sub, collection: true
+      attribute :sup, Sup, collection: true
+
+      xml do
+        root "part-title"
+
+        map_content to: :content
+        map_attribute "id", to: :id
+        map_attribute "specific-use", to: :specific_use
+        map_attribute "lang", to: :lang, namespace: "http://www.w3.org/XML/1998/namespace", prefix: "xml"
+        map_element "abbrev", to: :abbrev
+        map_element "email", to: :email
+        map_element "ext-link", to: :ext_link
+        map_element "uri", to: :uri
+        map_element "bold", to: :bold
+        map_element "fixed-case", to: :fixed_case
+        map_element "italic", to: :italic
+        map_element "monospace", to: :monospace
+        map_element "overline", to: :overline
+        map_element "roman", to: :roman
+        map_element "sans-serif", to: :sans_serif
+        map_element "sc", to: :sc
+        map_element "strike", to: :strike
+        map_element "underline", to: :underline
+        map_element "ruby", to: :ruby
+        map_element "alternatives", to: :alternatives
+        map_element "inline-graphic", to: :inline_graphic
+        map_element "inline-media", to: :inline_media
+        map_element "private-char", to: :private_char
+        map_element "chem-struct", to: :chem_struct
+        map_element "inline-formula", to: :inline_formula
+        map_element "tex-math", to: :tex_math
+        map_element "mml-math", to: :mml_math
+        map_element "named-content", to: :named_content
+        map_element "styled-content", to: :styled_content
+        map_element "fn", to: :fn
+        map_element "target", to: :target
+        map_element "xref", to: :xref
+        map_element "sub", to: :sub
+        map_element "sup", to: :sup
+      end
+    end
+  end
+end

data/lib/niso/jats/patent.rb

@@ -0,0 +1,25 @@
+# frozen_string_literal: true
+
+module Niso
+  module Jats
+    class Patent < Lutaml::Model::Serializable
+      attribute :content, :string
+      attribute :content_type, :string
+      attribute :country, :string
+      attribute :id, :string
+      attribute :specific_use, :string
+      attribute :lang, :string
+
+      xml do
+        root "patent"
+
+        map_content to: :content
+        map_attribute "content-type", to: :content_type
+        map_attribute "country", to: :country
+        map_attribute "id", to: :id
+        map_attribute "specific-use", to: :specific_use
+        map_attribute "lang", to: :lang, namespace: "http://www.w3.org/XML/1998/namespace", prefix: "xml"
+      end
+    end
+  end
+end

data/lib/niso/jats/permissions.rb

@@ -0,0 +1,23 @@
+# frozen_string_literal: true
+
+module Niso
+  module Jats
+    class Permissions < Lutaml::Model::Serializable
+      attribute :id, :string
+      attribute :copyright_statement, CopyrightStatement, collection: true
+      attribute :copyright_year, CopyrightYear, collection: true
+      attribute :copyright_holder, CopyrightHolder, collection: true
+      attribute :license, License, collection: true
+
+      xml do
+        root "permissions"
+
+        map_attribute "id", to: :id
+        map_element "copyright-statement", to: :copyright_statement
+        map_element "copyright-year", to: :copyright_year
+        map_element "copyright-holder", to: :copyright_holder
+        map_element "license", to: :license
+      end
+    end
+  end
+end

data/lib/niso/jats/person_group.rb

@@ -0,0 +1,45 @@
+# frozen_string_literal: true
+
+module Niso
+  module Jats
+    class PersonGroup < Lutaml::Model::Serializable
+      attribute :content, :string
+      attribute :custom_type, :string
+      attribute :id, :string
+      attribute :person_group_type, :string
+      attribute :specific_use, :string
+      attribute :lang, :string
+      attribute :anonymous, Anonymous, collection: true
+      attribute :collab, Collab, collection: true
+      attribute :collab_alternatives, CollabAlternatives, collection: true
+      attribute :name, Name, collection: true
+      attribute :name_alternatives, NameAlternatives, collection: true
+      attribute :string_name, StringName, collection: true
+      attribute :aff, Aff, collection: true
+      attribute :aff_alternatives, AffAlternatives, collection: true
+      attribute :etal, Etal, collection: true
+      attribute :role, Role, collection: true
+
+      xml do
+        root "person-group"
+
+        map_content to: :content
+        map_attribute "custom-type", to: :custom_type
+        map_attribute "id", to: :id
+        map_attribute "person-group-type", to: :person_group_type
+        map_attribute "specific-use", to: :specific_use
+        map_attribute "lang", to: :lang, namespace: "http://www.w3.org/XML/1998/namespace", prefix: "xml"
+        map_element "anonymous", to: :anonymous
+        map_element "collab", to: :collab
+        map_element "collab-alternatives", to: :collab_alternatives
+        map_element "name", to: :name
+        map_element "name-alternatives", to: :name_alternatives
+        map_element "string-name", to: :string_name
+        map_element "aff", to: :aff
+        map_element "aff-alternatives", to: :aff_alternatives
+        map_element "etal", to: :etal
+        map_element "role", to: :role
+      end
+    end
+  end
+end

data/lib/niso/jats/phone.rb

@@ -0,0 +1,21 @@
+# frozen_string_literal: true
+
+module Niso
+  module Jats
+    class Phone < Lutaml::Model::Serializable
+      attribute :content, :string
+      attribute :content_type, :string
+      attribute :id, :string
+      attribute :specific_use, :string
+
+      xml do
+        root "phone"
+
+        map_content to: :content
+        map_attribute "content-type", to: :content_type
+        map_attribute "id", to: :id
+        map_attribute "specific-use", to: :specific_use
+      end
+    end
+  end
+end

data/lib/niso/jats/postal_code.rb

@@ -0,0 +1,23 @@
+# frozen_string_literal: true
+
+module Niso
+  module Jats
+    class PostalCode < Lutaml::Model::Serializable
+      attribute :content, :string
+      attribute :content_type, :string
+      attribute :id, :string
+      attribute :specific_use, :string
+      attribute :lang, :string
+
+      xml do
+        root "postal-code"
+
+        map_content to: :content
+        map_attribute "content-type", to: :content_type
+        map_attribute "id", to: :id
+        map_attribute "specific-use", to: :specific_use
+        map_attribute "lang", to: :lang, namespace: "http://www.w3.org/XML/1998/namespace", prefix: "xml"
+      end
+    end
+  end
+end

data/lib/niso/jats/prefix.rb

@@ -0,0 +1,23 @@
+# frozen_string_literal: true
+
+module Niso
+  module Jats
+    class Prefix < Lutaml::Model::Serializable
+      attribute :content, :string
+      attribute :content_type, :string
+      attribute :id, :string
+      attribute :specific_use, :string
+      attribute :lang, :string
+
+      xml do
+        root "prefix"
+
+        map_content to: :content
+        map_attribute "content-type", to: :content_type
+        map_attribute "id", to: :id
+        map_attribute "specific-use", to: :specific_use
+        map_attribute "lang", to: :lang, namespace: "http://www.w3.org/XML/1998/namespace", prefix: "xml"
+      end
+    end
+  end
+end

data/lib/niso/jats/preformat.rb

@@ -0,0 +1,81 @@
+# frozen_string_literal: true
+
+module Niso
+  module Jats
+    class Preformat < Lutaml::Model::Serializable
+      attribute :content, :string
+      attribute :id, :string
+      attribute :orientation, :string, default: -> { "portrait" }
+      attribute :position, :string, default: -> { "float" }
+      attribute :preformat_type, :string
+      attribute :specific_use, :string
+      attribute :lang, :string
+      attribute :alt_text, AltText, collection: true
+      attribute :long_desc, LongDesc, collection: true
+      attribute :email, Email, collection: true
+      attribute :ext_link, ExtLink, collection: true
+      attribute :uri, Uri, collection: true
+      attribute :attrib, Attrib, collection: true
+      attribute :permissions, Permissions, collection: true
+      attribute :bold, Bold, collection: true
+      attribute :fixed_case, FixedCase, collection: true
+      attribute :italic, Italic, collection: true
+      attribute :monospace, Monospace, collection: true
+      attribute :overline, Overline, collection: true
+      attribute :roman, Roman, collection: true
+      attribute :sans_serif, SansSerif, collection: true
+      attribute :sc, Sc, collection: true
+      attribute :strike, Strike, collection: true
+      attribute :underline, Underline, collection: true
+      attribute :ruby, Ruby, collection: true
+      attribute :abbrev, Abbrev, collection: true
+      attribute :index_term, IndexTerm, collection: true
+      attribute :index_term_range_end, IndexTermRangeEnd, collection: true
+      attribute :milestone_end, MilestoneEnd, collection: true
+      attribute :milestone_start, MilestoneStart, collection: true
+      attribute :named_content, NamedContent, collection: true
+      attribute :styled_content, StyledContent, collection: true
+      attribute :sub, Sub, collection: true
+      attribute :sup, Sup, collection: true
+
+      xml do
+        root "preformat"
+
+        map_content to: :content
+        map_attribute "id", to: :id
+        map_attribute "orientation", to: :orientation
+        map_attribute "position", to: :position
+        map_attribute "preformat-type", to: :preformat_type
+        map_attribute "specific-use", to: :specific_use
+        map_attribute "lang", to: :lang, namespace: "http://www.w3.org/XML/1998/namespace", prefix: "xml"
+        map_element "alt-text", to: :alt_text
+        map_element "long-desc", to: :long_desc
+        map_element "email", to: :email
+        map_element "ext-link", to: :ext_link
+        map_element "uri", to: :uri
+        map_element "attrib", to: :attrib
+        map_element "permissions", to: :permissions
+        map_element "bold", to: :bold
+        map_element "fixed-case", to: :fixed_case
+        map_element "italic", to: :italic
+        map_element "monospace", to: :monospace
+        map_element "overline", to: :overline
+        map_element "roman", to: :roman
+        map_element "sans-serif", to: :sans_serif
+        map_element "sc", to: :sc
+        map_element "strike", to: :strike
+        map_element "underline", to: :underline
+        map_element "ruby", to: :ruby
+        map_element "abbrev", to: :abbrev
+        map_element "index-term", to: :index_term
+        map_element "index-term-range-end", to: :index_term_range_end
+        map_element "milestone-end", to: :milestone_end
+        map_element "milestone-start", to: :milestone_start
+        map_element "named-content", to: :named_content
+        map_element "styled-content", to: :styled_content
+        map_element "sub", to: :sub
+        map_element "sup", to: :sup
+      end
+    end
+  end
+end