myexperiment-rest 0.2.8 → 0.3.0

Sign up to get free protection for your applications and to get access to all the features.
@@ -5,7 +5,7 @@
5
5
  <head>
6
6
  <meta content="text/html; charset=UTF-8" http-equiv="Content-Type" />
7
7
 
8
- <title>Class: MyExperimentREST::TavernaUser</title>
8
+ <title>Class: MyExperimentREST::MyExperimentUser</title>
9
9
 
10
10
  <link rel="stylesheet" href="../rdoc.css" type="text/css" media="screen" />
11
11
 
@@ -34,8 +34,8 @@
34
34
  <div class="section-body">
35
35
  <ul>
36
36
 
37
- <li><a href="../lib/myexperiment-rest/myexperiment_rest_rb.html?TB_iframe=true&amp;height=550&amp;width=785"
38
- class="thickbox" title="lib/myexperiment-rest/myexperiment_rest.rb">lib/myexperiment-rest/myexperiment_rest.rb</a></li>
37
+ <li><a href="../lib/myexperiment-rest/user_rb.html?TB_iframe=true&amp;height=550&amp;width=785"
38
+ class="thickbox" title="lib/myexperiment-rest/user.rb">lib/myexperiment-rest/user.rb</a></li>
39
39
 
40
40
  </ul>
41
41
  </div>
@@ -67,6 +67,8 @@
67
67
 
68
68
  <li><a href="#method-c-new">::new</a></li>
69
69
 
70
+ <li><a href="#method-c-parse">::parse</a></li>
71
+
70
72
  </ul>
71
73
  </div>
72
74
 
@@ -108,13 +110,17 @@
108
110
 
109
111
  <li><a href="../MyExperimentREST.html">MyExperimentREST</a></li>
110
112
 
111
- <li><a href="../MyExperimentREST/TavernaIOData.html">MyExperimentREST::TavernaIOData</a></li>
113
+ <li><a href="../MyExperimentREST/MyExperimentIOData.html">MyExperimentREST::MyExperimentIOData</a></li>
114
+
115
+ <li><a href="../MyExperimentREST/MyExperimentUser.html">MyExperimentREST::MyExperimentUser</a></li>
112
116
 
113
- <li><a href="../MyExperimentREST/TavernaUser.html">MyExperimentREST::TavernaUser</a></li>
117
+ <li><a href="../MyExperimentREST/MyExperimentWorkflow.html">MyExperimentREST::MyExperimentWorkflow</a></li>
114
118
 
115
- <li><a href="../MyExperimentREST/TavernaWorkflow.html">MyExperimentREST::TavernaWorkflow</a></li>
119
+ <li><a href="../MyExperimentREST/Urls.html">MyExperimentREST::Urls</a></li>
116
120
 
117
- <li><a href="../MyExperimentREST/Workflows.html">MyExperimentREST::Workflows</a></li>
121
+ <li><a href="../MyExperimentREST/User.html">MyExperimentREST::User</a></li>
122
+
123
+ <li><a href="../MyExperimentREST/Workflow.html">MyExperimentREST::Workflow</a></li>
118
124
 
119
125
  </ul>
120
126
  <div id="no-class-search-results" style="display: none;">No matching classes.</div>
@@ -125,12 +131,12 @@
125
131
  </div>
126
132
 
127
133
  <div id="documentation">
128
- <h1 class="class">MyExperimentREST::TavernaUser</h1>
134
+ <h1 class="class">MyExperimentREST::MyExperimentUser</h1>
129
135
 
130
136
  <div id="description" class="description">
131
137
 
132
- <p>Contains all available information about an input or output: name,
133
- descriptions and examples. The last two are lists.</p>
138
+ <p>Contains information about a user. All basic information is available but
139
+ not some of the more advanced like all user’s friends or workflow’s.</p>
134
140
 
135
141
  </div><!-- description -->
136
142
 
@@ -148,11 +154,41 @@ descriptions and examples. The last two are lists.</p>
148
154
  <h3 class="section-header">Attributes</h3>
149
155
 
150
156
 
151
- <div id="avatar-attribute-method" class="method-detail">
152
- <a name="avatar"></a>
157
+ <div id="avatar_uri-attribute-method" class="method-detail">
158
+ <a name="avatar_uri"></a>
159
+
160
+ <div class="method-heading attribute-method-heading">
161
+ <span class="method-name">avatar_uri</span><span
162
+ class="attribute-access-type">[R]</span>
163
+ </div>
164
+
165
+ <div class="method-description">
166
+
167
+
168
+
169
+ </div>
170
+ </div>
171
+
172
+ <div id="city-attribute-method" class="method-detail">
173
+ <a name="city"></a>
174
+
175
+ <div class="method-heading attribute-method-heading">
176
+ <span class="method-name">city</span><span
177
+ class="attribute-access-type">[R]</span>
178
+ </div>
179
+
180
+ <div class="method-description">
181
+
182
+
183
+
184
+ </div>
185
+ </div>
186
+
187
+ <div id="country-attribute-method" class="method-detail">
188
+ <a name="country"></a>
153
189
 
154
190
  <div class="method-heading attribute-method-heading">
155
- <span class="method-name">avatar</span><span
191
+ <span class="method-name">country</span><span
156
192
  class="attribute-access-type">[R]</span>
157
193
  </div>
158
194
 
@@ -205,6 +241,21 @@ descriptions and examples. The last two are lists.</p>
205
241
 
206
242
 
207
243
 
244
+ </div>
245
+ </div>
246
+
247
+ <div id="id-attribute-method" class="method-detail">
248
+ <a name="id"></a>
249
+
250
+ <div class="method-heading attribute-method-heading">
251
+ <span class="method-name">id</span><span
252
+ class="attribute-access-type">[R]</span>
253
+ </div>
254
+
255
+ <div class="method-description">
256
+
257
+
258
+
208
259
  </div>
209
260
  </div>
210
261
 
@@ -253,7 +304,7 @@ descriptions and examples. The last two are lists.</p>
253
304
 
254
305
  <div class="method-heading">
255
306
  <span class="method-name">new</span><span
256
- class="method-args">(name, description, email, avatar, website, created_at)</span>
307
+ class="method-args">(attributes)</span>
257
308
  <span class="method-click-advice">click to toggle source</span>
258
309
  </div>
259
310
 
@@ -266,14 +317,17 @@ descriptions and examples. The last two are lists.</p>
266
317
 
267
318
  <div class="method-source-code" id="new-source">
268
319
  <pre>
269
- <span class="ruby-comment"># File lib/myexperiment-rest/myexperiment_rest.rb, line 176</span>
270
- <span class="ruby-keyword">def</span> <span class="ruby-identifier">initialize</span>(<span class="ruby-identifier">name</span>, <span class="ruby-identifier">description</span>, <span class="ruby-identifier">email</span>, <span class="ruby-identifier">avatar</span>, <span class="ruby-identifier">website</span>, <span class="ruby-identifier">created_at</span>)
271
- <span class="ruby-ivar">@name</span> = <span class="ruby-identifier">name</span>
272
- <span class="ruby-ivar">@description</span> = <span class="ruby-identifier">description</span>
273
- <span class="ruby-ivar">@email</span> = <span class="ruby-identifier">email</span>
274
- <span class="ruby-ivar">@avatar</span> = <span class="ruby-identifier">avatar</span>
275
- <span class="ruby-ivar">@website</span> = <span class="ruby-identifier">website</span>
276
- <span class="ruby-ivar">@created_at</span> = <span class="ruby-identifier">created_at</span>
320
+ <span class="ruby-comment"># File lib/myexperiment-rest/user.rb, line 50</span>
321
+ <span class="ruby-keyword">def</span> <span class="ruby-identifier">initialize</span>(<span class="ruby-identifier">attributes</span>)
322
+ <span class="ruby-ivar">@id</span> = <span class="ruby-identifier">attributes</span>[<span class="ruby-value">:id</span>]
323
+ <span class="ruby-ivar">@created_at</span> = <span class="ruby-identifier">attributes</span>[<span class="ruby-value">:created_at</span>]
324
+ <span class="ruby-ivar">@name</span> = <span class="ruby-identifier">attributes</span>[<span class="ruby-value">:name</span>]
325
+ <span class="ruby-ivar">@description</span> = <span class="ruby-identifier">attributes</span>[<span class="ruby-value">:description</span>]
326
+ <span class="ruby-ivar">@email</span> = <span class="ruby-identifier">attributes</span>[<span class="ruby-value">:email</span>]
327
+ <span class="ruby-ivar">@avatar_uri</span> = <span class="ruby-identifier">attributes</span>[<span class="ruby-value">:avatar_uri</span>]
328
+ <span class="ruby-ivar">@city</span> = <span class="ruby-identifier">attributes</span>[<span class="ruby-value">:city</span>]
329
+ <span class="ruby-ivar">@country</span> = <span class="ruby-identifier">attributes</span>[<span class="ruby-value">:country</span>]
330
+ <span class="ruby-ivar">@website</span> = <span class="ruby-identifier">attributes</span>[<span class="ruby-value">:website</span>]
277
331
  <span class="ruby-keyword">end</span></pre>
278
332
  </div><!-- new-source -->
279
333
 
@@ -285,6 +339,52 @@ descriptions and examples. The last two are lists.</p>
285
339
  </div><!-- new-method -->
286
340
 
287
341
 
342
+ <div id="parse-method" class="method-detail ">
343
+ <a name="method-c-parse"></a>
344
+
345
+
346
+ <div class="method-heading">
347
+ <span class="method-name">parse</span><span
348
+ class="method-args">(xml)</span>
349
+ <span class="method-click-advice">click to toggle source</span>
350
+ </div>
351
+
352
+
353
+ <div class="method-description">
354
+
355
+ <p>Acquire data from XML response and instantiate a <em><a
356
+ href="MyExperimentWorkflow.html">MyExperimentWorkflow</a></em> object</p>
357
+
358
+
359
+
360
+ <div class="method-source-code" id="parse-source">
361
+ <pre>
362
+ <span class="ruby-comment"># File lib/myexperiment-rest/user.rb, line 64</span>
363
+ <span class="ruby-keyword">def</span> <span class="ruby-keyword">self</span>.<span class="ruby-identifier">parse</span>(<span class="ruby-identifier">xml</span>)
364
+
365
+ <span class="ruby-identifier">doc</span> = <span class="ruby-constant">LibXML</span><span class="ruby-operator">::</span><span class="ruby-constant">XML</span><span class="ruby-operator">::</span><span class="ruby-constant">Document</span>.<span class="ruby-identifier">string</span>(<span class="ruby-identifier">xml</span>)
366
+
367
+ <span class="ruby-identifier">new</span>(<span class="ruby-value">:id</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">doc</span>.<span class="ruby-identifier">find_first</span>(<span class="ruby-string">&quot;/user/id&quot;</span>).<span class="ruby-identifier">content</span>,
368
+ <span class="ruby-value">:created_at</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">doc</span>.<span class="ruby-identifier">find_first</span>(<span class="ruby-string">&quot;/user/created-at&quot;</span>).<span class="ruby-identifier">content</span>,
369
+ <span class="ruby-value">:name</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">doc</span>.<span class="ruby-identifier">find_first</span>(<span class="ruby-string">&quot;/user/name&quot;</span>).<span class="ruby-identifier">content</span>,
370
+ <span class="ruby-value">:description</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">doc</span>.<span class="ruby-identifier">find_first</span>(<span class="ruby-string">&quot;/user/description&quot;</span>).<span class="ruby-identifier">content</span>,
371
+ <span class="ruby-value">:email</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">doc</span>.<span class="ruby-identifier">find_first</span>(<span class="ruby-string">&quot;/user/email&quot;</span>).<span class="ruby-identifier">content</span>,
372
+ <span class="ruby-value">:avatar_uri</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">doc</span>.<span class="ruby-identifier">find_first</span>(<span class="ruby-string">&quot;/user/avatar&quot;</span>).<span class="ruby-identifier">attributes</span>[<span class="ruby-value">:uri</span>],
373
+ <span class="ruby-value">:city</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">doc</span>.<span class="ruby-identifier">find_first</span>(<span class="ruby-string">&quot;/user/city&quot;</span>).<span class="ruby-identifier">content</span>,
374
+ <span class="ruby-value">:country</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">doc</span>.<span class="ruby-identifier">find_first</span>(<span class="ruby-string">&quot;/user/country&quot;</span>).<span class="ruby-identifier">content</span>,
375
+ <span class="ruby-value">:website</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">doc</span>.<span class="ruby-identifier">find_first</span>(<span class="ruby-string">&quot;/user/website&quot;</span>).<span class="ruby-identifier">content</span>)
376
+
377
+ <span class="ruby-keyword">end</span></pre>
378
+ </div><!-- parse-source -->
379
+
380
+ </div>
381
+
382
+
383
+
384
+
385
+ </div><!-- parse-method -->
386
+
387
+
288
388
  </div><!-- public-class-method-details -->
289
389
 
290
390
  </div><!-- 5Buntitled-5D -->
@@ -5,7 +5,7 @@
5
5
  <head>
6
6
  <meta content="text/html; charset=UTF-8" http-equiv="Content-Type" />
7
7
 
8
- <title>Class: MyExperimentREST::TavernaWorkflow</title>
8
+ <title>Class: MyExperimentREST::MyExperimentWorkflow</title>
9
9
 
10
10
  <link rel="stylesheet" href="../rdoc.css" type="text/css" media="screen" />
11
11
 
@@ -34,8 +34,8 @@
34
34
  <div class="section-body">
35
35
  <ul>
36
36
 
37
- <li><a href="../lib/myexperiment-rest/myexperiment_rest_rb.html?TB_iframe=true&amp;height=550&amp;width=785"
38
- class="thickbox" title="lib/myexperiment-rest/myexperiment_rest.rb">lib/myexperiment-rest/myexperiment_rest.rb</a></li>
37
+ <li><a href="../lib/myexperiment-rest/workflow_rb.html?TB_iframe=true&amp;height=550&amp;width=785"
38
+ class="thickbox" title="lib/myexperiment-rest/workflow.rb">lib/myexperiment-rest/workflow.rb</a></li>
39
39
 
40
40
  </ul>
41
41
  </div>
@@ -67,6 +67,8 @@
67
67
 
68
68
  <li><a href="#method-c-new">::new</a></li>
69
69
 
70
+ <li><a href="#method-c-parse">::parse</a></li>
71
+
70
72
  </ul>
71
73
  </div>
72
74
 
@@ -108,13 +110,17 @@
108
110
 
109
111
  <li><a href="../MyExperimentREST.html">MyExperimentREST</a></li>
110
112
 
111
- <li><a href="../MyExperimentREST/TavernaIOData.html">MyExperimentREST::TavernaIOData</a></li>
113
+ <li><a href="../MyExperimentREST/MyExperimentIOData.html">MyExperimentREST::MyExperimentIOData</a></li>
114
+
115
+ <li><a href="../MyExperimentREST/MyExperimentUser.html">MyExperimentREST::MyExperimentUser</a></li>
112
116
 
113
- <li><a href="../MyExperimentREST/TavernaUser.html">MyExperimentREST::TavernaUser</a></li>
117
+ <li><a href="../MyExperimentREST/MyExperimentWorkflow.html">MyExperimentREST::MyExperimentWorkflow</a></li>
114
118
 
115
- <li><a href="../MyExperimentREST/TavernaWorkflow.html">MyExperimentREST::TavernaWorkflow</a></li>
119
+ <li><a href="../MyExperimentREST/Urls.html">MyExperimentREST::Urls</a></li>
116
120
 
117
- <li><a href="../MyExperimentREST/Workflows.html">MyExperimentREST::Workflows</a></li>
121
+ <li><a href="../MyExperimentREST/User.html">MyExperimentREST::User</a></li>
122
+
123
+ <li><a href="../MyExperimentREST/Workflow.html">MyExperimentREST::Workflow</a></li>
118
124
 
119
125
  </ul>
120
126
  <div id="no-class-search-results" style="display: none;">No matching classes.</div>
@@ -125,21 +131,19 @@
125
131
  </div>
126
132
 
127
133
  <div id="documentation">
128
- <h1 class="class">MyExperimentREST::TavernaWorkflow</h1>
134
+ <h1 class="class">MyExperimentREST::MyExperimentWorkflow</h1>
129
135
 
130
136
  <div id="description" class="description">
131
137
 
132
138
  <p>Contains all available information about a workflow: <em><a
133
- href="TavernaWorkflow.html#attribute-i-input_type">input_type</a></em>,
134
- <em><a href="TavernaWorkflow.html#attribute-i-xml_uri">xml_uri</a></em>,
139
+ href="MyExperimentWorkflow.html#attribute-i-xml_uri">xml_uri</a></em>,
135
140
  <em>title</em>, <em>description</em>,<em>inputs</em>, <em>outputs</em> and
136
- <em>user</em>. The <em><a
137
- href="TavernaWorkflow.html#attribute-i-xml_uri">xml_uri</a></em> specifies
138
- the XML description on myExperiment and not the XML of the workflow itself.
139
141
  <em><a
140
- href="TavernaWorkflow.html#attribute-i-input_type">input_type</a></em>
141
- specifies the kind of input. Currently, either “myexperiment”
142
- (myExperiment’s xml uri) or “t2flow” (filename)</p>
142
+ href="MyExperimentWorkflow.html#attribute-i-uploader_uri">uploader_uri</a></em>.
143
+ The <em><a
144
+ href="MyExperimentWorkflow.html#attribute-i-xml_uri">xml_uri</a></em>
145
+ specifies the XML description on myExperiment and not the XML of the
146
+ workflow itself.</p>
143
147
 
144
148
  </div><!-- description -->
145
149
 
@@ -150,24 +154,6 @@ specifies the kind of input. Currently, either “myexperiment”
150
154
 
151
155
 
152
156
 
153
- <!-- Constants -->
154
- <div id="constants-list" class="section">
155
- <h3 class="section-header">Constants</h3>
156
- <dl>
157
-
158
- <dt><a name="MY_EXPERIMENT">MY_EXPERIMENT</a></dt>
159
-
160
- <dd class="description"><p>possible input types</p></dd>
161
-
162
-
163
- <dt><a name="T2_FLOW">T2_FLOW</a></dt>
164
-
165
- <dd class="description"></dd>
166
-
167
-
168
- </dl>
169
- </div>
170
-
171
157
 
172
158
 
173
159
  <!-- Attributes -->
@@ -187,21 +173,6 @@ specifies the kind of input. Currently, either “myexperiment”
187
173
 
188
174
 
189
175
 
190
- </div>
191
- </div>
192
-
193
- <div id="input_type-attribute-method" class="method-detail">
194
- <a name="input_type"></a>
195
-
196
- <div class="method-heading attribute-method-heading">
197
- <span class="method-name">input_type</span><span
198
- class="attribute-access-type">[R]</span>
199
- </div>
200
-
201
- <div class="method-description">
202
-
203
-
204
-
205
176
  </div>
206
177
  </div>
207
178
 
@@ -250,11 +221,11 @@ specifies the kind of input. Currently, either “myexperiment”
250
221
  </div>
251
222
  </div>
252
223
 
253
- <div id="user-attribute-method" class="method-detail">
254
- <a name="user"></a>
224
+ <div id="uploader_uri-attribute-method" class="method-detail">
225
+ <a name="uploader_uri"></a>
255
226
 
256
227
  <div class="method-heading attribute-method-heading">
257
- <span class="method-name">user</span><span
228
+ <span class="method-name">uploader_uri</span><span
258
229
  class="attribute-access-type">[R]</span>
259
230
  </div>
260
231
 
@@ -295,7 +266,7 @@ specifies the kind of input. Currently, either “myexperiment”
295
266
 
296
267
  <div class="method-heading">
297
268
  <span class="method-name">new</span><span
298
- class="method-args">(input_type, xml_uri, title, description, inputs, outputs, user)</span>
269
+ class="method-args">(attributes)</span>
299
270
  <span class="method-click-advice">click to toggle source</span>
300
271
  </div>
301
272
 
@@ -308,15 +279,14 @@ specifies the kind of input. Currently, either “myexperiment”
308
279
 
309
280
  <div class="method-source-code" id="new-source">
310
281
  <pre>
311
- <span class="ruby-comment"># File lib/myexperiment-rest/myexperiment_rest.rb, line 137</span>
312
- <span class="ruby-keyword">def</span> <span class="ruby-identifier">initialize</span>(<span class="ruby-identifier">input_type</span>, <span class="ruby-identifier">xml_uri</span>, <span class="ruby-identifier">title</span>, <span class="ruby-identifier">description</span>, <span class="ruby-identifier">inputs</span>, <span class="ruby-identifier">outputs</span>, <span class="ruby-identifier">user</span>)
313
- <span class="ruby-ivar">@input_type</span> = <span class="ruby-identifier">input_type</span>
314
- <span class="ruby-ivar">@xml_uri</span> = <span class="ruby-identifier">xml_uri</span>
315
- <span class="ruby-ivar">@title</span> = <span class="ruby-identifier">title</span>
316
- <span class="ruby-ivar">@description</span> = <span class="ruby-identifier">description</span>
317
- <span class="ruby-ivar">@inputs</span> = <span class="ruby-identifier">inputs</span>
318
- <span class="ruby-ivar">@outputs</span> = <span class="ruby-identifier">outputs</span>
319
- <span class="ruby-ivar">@user</span> = <span class="ruby-identifier">user</span>
282
+ <span class="ruby-comment"># File lib/myexperiment-rest/workflow.rb, line 61</span>
283
+ <span class="ruby-keyword">def</span> <span class="ruby-identifier">initialize</span>(<span class="ruby-identifier">attributes</span>)
284
+ <span class="ruby-ivar">@xml_uri</span> = <span class="ruby-identifier">attributes</span>[<span class="ruby-value">:xml_uri</span>]
285
+ <span class="ruby-ivar">@title</span> = <span class="ruby-identifier">attributes</span>[<span class="ruby-value">:title</span>]
286
+ <span class="ruby-ivar">@description</span> = <span class="ruby-identifier">attributes</span>[<span class="ruby-value">:description</span>]
287
+ <span class="ruby-ivar">@inputs</span> = <span class="ruby-identifier">attributes</span>[<span class="ruby-value">:inputs</span>]
288
+ <span class="ruby-ivar">@outputs</span> = <span class="ruby-identifier">attributes</span>[<span class="ruby-value">:outputs</span>]
289
+ <span class="ruby-ivar">@uploader_uri</span> = <span class="ruby-identifier">attributes</span>[<span class="ruby-value">:uploader_uri</span>]
320
290
  <span class="ruby-keyword">end</span></pre>
321
291
  </div><!-- new-source -->
322
292
 
@@ -328,6 +298,61 @@ specifies the kind of input. Currently, either “myexperiment”
328
298
  </div><!-- new-method -->
329
299
 
330
300
 
301
+ <div id="parse-method" class="method-detail ">
302
+ <a name="method-c-parse"></a>
303
+
304
+
305
+ <div class="method-heading">
306
+ <span class="method-name">parse</span><span
307
+ class="method-args">(xml)</span>
308
+ <span class="method-click-advice">click to toggle source</span>
309
+ </div>
310
+
311
+
312
+ <div class="method-description">
313
+
314
+ <p>Parse workflow information XML and instantiate a <em><a
315
+ href="MyExperimentWorkflow.html">MyExperimentWorkflow</a></em> object</p>
316
+
317
+
318
+
319
+ <div class="method-source-code" id="parse-source">
320
+ <pre>
321
+ <span class="ruby-comment"># File lib/myexperiment-rest/workflow.rb, line 71</span>
322
+ <span class="ruby-keyword">def</span> <span class="ruby-keyword">self</span>.<span class="ruby-identifier">parse</span>(<span class="ruby-identifier">xml</span>)
323
+
324
+ <span class="ruby-identifier">wkf_inputs</span> = []
325
+ <span class="ruby-identifier">wkf_outputs</span> = []
326
+
327
+ <span class="ruby-identifier">doc</span> = <span class="ruby-constant">LibXML</span><span class="ruby-operator">::</span><span class="ruby-constant">XML</span><span class="ruby-operator">::</span><span class="ruby-constant">Document</span>.<span class="ruby-identifier">string</span>(<span class="ruby-identifier">xml</span>)
328
+
329
+ <span class="ruby-identifier">doc</span>.<span class="ruby-identifier">find</span>(<span class="ruby-string">&quot;//workflow/components/dataflows/dataflow[@role='top']/sources/source&quot;</span>).<span class="ruby-identifier">each</span> <span class="ruby-keyword">do</span> <span class="ruby-operator">|</span><span class="ruby-identifier">element</span><span class="ruby-operator">|</span>
330
+ <span class="ruby-identifier">wkf_inputs</span> <span class="ruby-operator">&lt;&lt;</span> <span class="ruby-constant">MyExperimentIOData</span>.<span class="ruby-identifier">from_xml</span>(<span class="ruby-identifier">element</span>)
331
+ <span class="ruby-keyword">end</span>
332
+
333
+ <span class="ruby-identifier">doc</span>.<span class="ruby-identifier">find</span>(<span class="ruby-string">&quot;//workflow/components/dataflows/dataflow[@role='top']/sinks/sink&quot;</span>).<span class="ruby-identifier">each</span> <span class="ruby-keyword">do</span> <span class="ruby-operator">|</span><span class="ruby-identifier">element</span><span class="ruby-operator">|</span>
334
+ <span class="ruby-identifier">wkf_outputs</span> <span class="ruby-operator">&lt;&lt;</span> <span class="ruby-constant">MyExperimentIOData</span>.<span class="ruby-identifier">from_xml</span>(<span class="ruby-identifier">element</span>)
335
+ <span class="ruby-keyword">end</span>
336
+
337
+
338
+ <span class="ruby-identifier">new</span>(<span class="ruby-value">:xml_uri</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">doc</span>.<span class="ruby-identifier">find_first</span>(<span class="ruby-string">&quot;/workflow/content-uri&quot;</span>).<span class="ruby-identifier">content</span>,
339
+ <span class="ruby-value">:title</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">doc</span>.<span class="ruby-identifier">find_first</span>(<span class="ruby-string">&quot;/workflow/title&quot;</span>).<span class="ruby-identifier">content</span>,
340
+ <span class="ruby-value">:description</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">doc</span>.<span class="ruby-identifier">find_first</span>(<span class="ruby-string">&quot;/workflow/description&quot;</span>).<span class="ruby-identifier">content</span>,
341
+ <span class="ruby-value">:inputs</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">wkf_inputs</span>,
342
+ <span class="ruby-value">:outputs</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">wkf_outputs</span>,
343
+ <span class="ruby-value">:uploader_uri</span> =<span class="ruby-operator">&gt;</span> <span class="ruby-identifier">doc</span>.<span class="ruby-identifier">find_first</span>(<span class="ruby-string">&quot;/workflow/uploader&quot;</span>).<span class="ruby-identifier">attributes</span>[<span class="ruby-string">'uri'</span>])
344
+
345
+ <span class="ruby-keyword">end</span></pre>
346
+ </div><!-- parse-source -->
347
+
348
+ </div>
349
+
350
+
351
+
352
+
353
+ </div><!-- parse-method -->
354
+
355
+
331
356
  </div><!-- public-class-method-details -->
332
357
 
333
358
  </div><!-- 5Buntitled-5D -->
@@ -0,0 +1,168 @@
1
+ <?xml version="1.0" encoding="UTF-8"?>
2
+ <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN"
3
+ "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd">
4
+ <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
5
+ <head>
6
+ <meta content="text/html; charset=UTF-8" http-equiv="Content-Type" />
7
+
8
+ <title>Module: MyExperimentREST::Urls</title>
9
+
10
+ <link rel="stylesheet" href="../rdoc.css" type="text/css" media="screen" />
11
+
12
+ <script src="../js/jquery.js" type="text/javascript" charset="utf-8"></script>
13
+ <script src="../js/thickbox-compressed.js" type="text/javascript" charset="utf-8"></script>
14
+ <script src="../js/quicksearch.js" type="text/javascript" charset="utf-8"></script>
15
+ <script src="../js/darkfish.js" type="text/javascript" charset="utf-8"></script>
16
+
17
+ </head>
18
+ <body id="top" class="module">
19
+
20
+ <div id="metadata">
21
+ <div id="home-metadata">
22
+ <div id="home-section" class="section">
23
+ <h3 class="section-header">
24
+ <a href="../index.html">Home</a>
25
+ <a href="../index.html#classes">Classes</a>
26
+ <a href="../index.html#methods">Methods</a>
27
+ </h3>
28
+ </div>
29
+ </div>
30
+
31
+ <div id="file-metadata">
32
+ <div id="file-list-section" class="section">
33
+ <h3 class="section-header">In Files</h3>
34
+ <div class="section-body">
35
+ <ul>
36
+
37
+ <li><a href="../lib/myexperiment-rest/constants_rb.html?TB_iframe=true&amp;height=550&amp;width=785"
38
+ class="thickbox" title="lib/myexperiment-rest/constants.rb">lib/myexperiment-rest/constants.rb</a></li>
39
+
40
+ </ul>
41
+ </div>
42
+ </div>
43
+
44
+
45
+ </div>
46
+
47
+ <div id="class-metadata">
48
+
49
+
50
+
51
+
52
+
53
+
54
+
55
+
56
+
57
+ </div>
58
+
59
+ <div id="project-metadata">
60
+
61
+
62
+ <div id="fileindex-section" class="section project-section">
63
+ <h3 class="section-header">Files</h3>
64
+ <ul>
65
+
66
+ <li class="file"><a href="../CHANGES.html">CHANGES</a></li>
67
+
68
+ <li class="file"><a href="../LICENSE.html">LICENSE</a></li>
69
+
70
+ <li class="file"><a href="../README.html">README</a></li>
71
+
72
+ </ul>
73
+ </div>
74
+
75
+
76
+ <div id="classindex-section" class="section project-section">
77
+ <h3 class="section-header">Class/Module Index
78
+ <span class="search-toggle"><img src="../images/find.png"
79
+ height="16" width="16" alt="[+]"
80
+ title="show/hide quicksearch" /></span></h3>
81
+ <form action="#" method="get" accept-charset="utf-8" class="initially-hidden">
82
+ <fieldset>
83
+ <legend>Quicksearch</legend>
84
+ <input type="text" name="quicksearch" value=""
85
+ class="quicksearch-field" />
86
+ </fieldset>
87
+ </form>
88
+
89
+ <ul class="link-list">
90
+
91
+ <li><a href="../MyExperimentREST.html">MyExperimentREST</a></li>
92
+
93
+ <li><a href="../MyExperimentREST/MyExperimentIOData.html">MyExperimentREST::MyExperimentIOData</a></li>
94
+
95
+ <li><a href="../MyExperimentREST/MyExperimentUser.html">MyExperimentREST::MyExperimentUser</a></li>
96
+
97
+ <li><a href="../MyExperimentREST/MyExperimentWorkflow.html">MyExperimentREST::MyExperimentWorkflow</a></li>
98
+
99
+ <li><a href="../MyExperimentREST/Urls.html">MyExperimentREST::Urls</a></li>
100
+
101
+ <li><a href="../MyExperimentREST/User.html">MyExperimentREST::User</a></li>
102
+
103
+ <li><a href="../MyExperimentREST/Workflow.html">MyExperimentREST::Workflow</a></li>
104
+
105
+ </ul>
106
+ <div id="no-class-search-results" style="display: none;">No matching classes.</div>
107
+ </div>
108
+
109
+
110
+ </div>
111
+ </div>
112
+
113
+ <div id="documentation">
114
+ <h1 class="module">MyExperimentREST::Urls</h1>
115
+
116
+ <div id="description" class="description">
117
+
118
+ </div><!-- description -->
119
+
120
+
121
+ <div id="5Buntitled-5D" class="documentation-section">
122
+
123
+
124
+
125
+
126
+
127
+ <!-- Constants -->
128
+ <div id="constants-list" class="section">
129
+ <h3 class="section-header">Constants</h3>
130
+ <dl>
131
+
132
+ <dt><a name="MYEXPERIMENT_URL">MYEXPERIMENT_URL</a></dt>
133
+
134
+ <dd class="description"><p>URL constants</p></dd>
135
+
136
+
137
+ <dt><a name="USER_URL">USER_URL</a></dt>
138
+
139
+ <dd class="description"></dd>
140
+
141
+
142
+ <dt><a name="WORKFLOW_URL">WORKFLOW_URL</a></dt>
143
+
144
+ <dd class="description"></dd>
145
+
146
+
147
+ </dl>
148
+ </div>
149
+
150
+
151
+
152
+
153
+ <!-- Methods -->
154
+
155
+ </div><!-- 5Buntitled-5D -->
156
+
157
+
158
+ </div><!-- documentation -->
159
+
160
+ <div id="validator-badges">
161
+ <p><small><a href="http://validator.w3.org/check/referer">[Validate]</a></small></p>
162
+ <p><small>Generated with the <a href="http://deveiate.org/projects/Darkfish-Rdoc/">Darkfish
163
+ Rdoc Generator</a> 2</small>.</p>
164
+ </div>
165
+
166
+ </body>
167
+ </html>
168
+