minimap2 0.2.25.1 → 0.2.25.2

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Files changed (100) hide show
  1. checksums.yaml +4 -4
  2. data/ext/Rakefile +2 -2
  3. data/lib/minimap2/version.rb +1 -1
  4. metadata +1 -97
  5. data/ext/minimap2/lib/simde/CONTRIBUTING.md +0 -114
  6. data/ext/minimap2/lib/simde/COPYING +0 -20
  7. data/ext/minimap2/lib/simde/README.md +0 -333
  8. data/ext/minimap2/lib/simde/amalgamate.py +0 -58
  9. data/ext/minimap2/lib/simde/meson.build +0 -33
  10. data/ext/minimap2/lib/simde/netlify.toml +0 -20
  11. data/ext/minimap2/lib/simde/simde/arm/neon/float32x2.h +0 -140
  12. data/ext/minimap2/lib/simde/simde/arm/neon/float32x4.h +0 -137
  13. data/ext/minimap2/lib/simde/simde/arm/neon/float64x1.h +0 -142
  14. data/ext/minimap2/lib/simde/simde/arm/neon/float64x2.h +0 -145
  15. data/ext/minimap2/lib/simde/simde/arm/neon/int16x4.h +0 -140
  16. data/ext/minimap2/lib/simde/simde/arm/neon/int16x8.h +0 -145
  17. data/ext/minimap2/lib/simde/simde/arm/neon/int32x2.h +0 -140
  18. data/ext/minimap2/lib/simde/simde/arm/neon/int32x4.h +0 -143
  19. data/ext/minimap2/lib/simde/simde/arm/neon/int64x1.h +0 -137
  20. data/ext/minimap2/lib/simde/simde/arm/neon/int64x2.h +0 -141
  21. data/ext/minimap2/lib/simde/simde/arm/neon/int8x16.h +0 -147
  22. data/ext/minimap2/lib/simde/simde/arm/neon/int8x8.h +0 -141
  23. data/ext/minimap2/lib/simde/simde/arm/neon/uint16x4.h +0 -134
  24. data/ext/minimap2/lib/simde/simde/arm/neon/uint16x8.h +0 -138
  25. data/ext/minimap2/lib/simde/simde/arm/neon/uint32x2.h +0 -134
  26. data/ext/minimap2/lib/simde/simde/arm/neon/uint32x4.h +0 -137
  27. data/ext/minimap2/lib/simde/simde/arm/neon/uint64x1.h +0 -131
  28. data/ext/minimap2/lib/simde/simde/arm/neon/uint64x2.h +0 -135
  29. data/ext/minimap2/lib/simde/simde/arm/neon/uint8x16.h +0 -141
  30. data/ext/minimap2/lib/simde/simde/arm/neon/uint8x8.h +0 -135
  31. data/ext/minimap2/lib/simde/simde/arm/neon.h +0 -97
  32. data/ext/minimap2/lib/simde/simde/check.h +0 -267
  33. data/ext/minimap2/lib/simde/simde/debug-trap.h +0 -83
  34. data/ext/minimap2/lib/simde/simde/hedley.h +0 -1899
  35. data/ext/minimap2/lib/simde/simde/simde-arch.h +0 -445
  36. data/ext/minimap2/lib/simde/simde/simde-common.h +0 -697
  37. data/ext/minimap2/lib/simde/simde/x86/avx.h +0 -5385
  38. data/ext/minimap2/lib/simde/simde/x86/avx2.h +0 -2402
  39. data/ext/minimap2/lib/simde/simde/x86/avx512bw.h +0 -391
  40. data/ext/minimap2/lib/simde/simde/x86/avx512f.h +0 -3389
  41. data/ext/minimap2/lib/simde/simde/x86/avx512vl.h +0 -112
  42. data/ext/minimap2/lib/simde/simde/x86/fma.h +0 -659
  43. data/ext/minimap2/lib/simde/simde/x86/mmx.h +0 -2210
  44. data/ext/minimap2/lib/simde/simde/x86/sse.h +0 -3696
  45. data/ext/minimap2/lib/simde/simde/x86/sse2.h +0 -5991
  46. data/ext/minimap2/lib/simde/simde/x86/sse3.h +0 -343
  47. data/ext/minimap2/lib/simde/simde/x86/sse4.1.h +0 -1783
  48. data/ext/minimap2/lib/simde/simde/x86/sse4.2.h +0 -105
  49. data/ext/minimap2/lib/simde/simde/x86/ssse3.h +0 -1053
  50. data/ext/minimap2/lib/simde/simde/x86/svml.h +0 -543
  51. data/ext/minimap2/lib/simde/test/CMakeLists.txt +0 -166
  52. data/ext/minimap2/lib/simde/test/arm/meson.build +0 -4
  53. data/ext/minimap2/lib/simde/test/arm/neon/meson.build +0 -23
  54. data/ext/minimap2/lib/simde/test/arm/neon/skel.c +0 -871
  55. data/ext/minimap2/lib/simde/test/arm/neon/test-neon-internal.h +0 -134
  56. data/ext/minimap2/lib/simde/test/arm/neon/test-neon.c +0 -39
  57. data/ext/minimap2/lib/simde/test/arm/neon/test-neon.h +0 -10
  58. data/ext/minimap2/lib/simde/test/arm/neon/vadd.c +0 -1260
  59. data/ext/minimap2/lib/simde/test/arm/neon/vdup_n.c +0 -873
  60. data/ext/minimap2/lib/simde/test/arm/neon/vmul.c +0 -1084
  61. data/ext/minimap2/lib/simde/test/arm/neon/vsub.c +0 -1260
  62. data/ext/minimap2/lib/simde/test/arm/test-arm-internal.h +0 -18
  63. data/ext/minimap2/lib/simde/test/arm/test-arm.c +0 -20
  64. data/ext/minimap2/lib/simde/test/arm/test-arm.h +0 -8
  65. data/ext/minimap2/lib/simde/test/cmake/AddCompilerFlags.cmake +0 -171
  66. data/ext/minimap2/lib/simde/test/cmake/ExtraWarningFlags.cmake +0 -68
  67. data/ext/minimap2/lib/simde/test/meson.build +0 -64
  68. data/ext/minimap2/lib/simde/test/munit/COPYING +0 -21
  69. data/ext/minimap2/lib/simde/test/munit/Makefile +0 -55
  70. data/ext/minimap2/lib/simde/test/munit/README.md +0 -54
  71. data/ext/minimap2/lib/simde/test/munit/example.c +0 -351
  72. data/ext/minimap2/lib/simde/test/munit/meson.build +0 -37
  73. data/ext/minimap2/lib/simde/test/munit/munit.c +0 -2055
  74. data/ext/minimap2/lib/simde/test/munit/munit.h +0 -535
  75. data/ext/minimap2/lib/simde/test/run-tests.c +0 -20
  76. data/ext/minimap2/lib/simde/test/run-tests.h +0 -260
  77. data/ext/minimap2/lib/simde/test/x86/avx.c +0 -13752
  78. data/ext/minimap2/lib/simde/test/x86/avx2.c +0 -9977
  79. data/ext/minimap2/lib/simde/test/x86/avx512bw.c +0 -2664
  80. data/ext/minimap2/lib/simde/test/x86/avx512f.c +0 -10416
  81. data/ext/minimap2/lib/simde/test/x86/avx512vl.c +0 -210
  82. data/ext/minimap2/lib/simde/test/x86/fma.c +0 -2557
  83. data/ext/minimap2/lib/simde/test/x86/meson.build +0 -33
  84. data/ext/minimap2/lib/simde/test/x86/mmx.c +0 -2878
  85. data/ext/minimap2/lib/simde/test/x86/skel.c +0 -2984
  86. data/ext/minimap2/lib/simde/test/x86/sse.c +0 -5121
  87. data/ext/minimap2/lib/simde/test/x86/sse2.c +0 -9860
  88. data/ext/minimap2/lib/simde/test/x86/sse3.c +0 -486
  89. data/ext/minimap2/lib/simde/test/x86/sse4.1.c +0 -3446
  90. data/ext/minimap2/lib/simde/test/x86/sse4.2.c +0 -101
  91. data/ext/minimap2/lib/simde/test/x86/ssse3.c +0 -2084
  92. data/ext/minimap2/lib/simde/test/x86/svml.c +0 -1545
  93. data/ext/minimap2/lib/simde/test/x86/test-avx.h +0 -16
  94. data/ext/minimap2/lib/simde/test/x86/test-avx512.h +0 -25
  95. data/ext/minimap2/lib/simde/test/x86/test-mmx.h +0 -13
  96. data/ext/minimap2/lib/simde/test/x86/test-sse.h +0 -13
  97. data/ext/minimap2/lib/simde/test/x86/test-sse2.h +0 -13
  98. data/ext/minimap2/lib/simde/test/x86/test-x86-internal.h +0 -196
  99. data/ext/minimap2/lib/simde/test/x86/test-x86.c +0 -48
  100. data/ext/minimap2/lib/simde/test/x86/test-x86.h +0 -8
@@ -1,112 +0,0 @@
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- /* Permission is hereby granted, free of charge, to any person
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- * obtaining a copy of this software and associated documentation
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- * files (the "Software"), to deal in the Software without
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- * restriction, including without limitation the rights to use, copy,
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- * modify, merge, publish, distribute, sublicense, and/or sell copies
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- * of the Software, and to permit persons to whom the Software is
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- * furnished to do so, subject to the following conditions:
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- *
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- * The above copyright notice and this permission notice shall be
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- * included in all copies or substantial portions of the Software.
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- *
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- * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
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- * EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
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- * MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
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- * NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS
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- * BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN
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- * ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN
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- * CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
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- * SOFTWARE.
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- *
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- * Copyright:
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- * 2020 Evan Nemerson <evan@nemerson.com>
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- */
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-
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- #if !defined(SIMDE__AVX512VL_H)
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- #define SIMDE__AVX512VL_H
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- #include "avx512bw.h"
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-
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- HEDLEY_DIAGNOSTIC_PUSH
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- SIMDE_DISABLE_UNWANTED_DIAGNOSTICS
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-
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- #if defined(SIMDE_AVX512VL_NATIVE)
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- #undef SIMDE_AVX512VL_NATIVE
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- #endif
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- #if defined(SIMDE_ARCH_X86_AVX512VL) && !defined(SIMDE_AVX512VL_NO_NATIVE) && !defined(SIMDE_NO_NATIVE)
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- #define SIMDE_AVX512VL_NATIVE
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- #elif defined(SIMDE_ARCH_ARM_NEON) && !defined(SIMDE_AVX512VL_NO_NEON) && !defined(SIMDE_NO_NEON)
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- #define SIMDE_AVX512VL_NEON
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- #elif defined(SIMDE_ARCH_POWER_ALTIVEC)
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- #define SIMDE_AVX512VL_POWER_ALTIVEC
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- #endif
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-
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- #if defined(SIMDE_AVX512VL_NATIVE)
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- #include <immintrin.h>
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- #endif
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-
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- #if defined(SIMDE_AVX512VL_POWER_ALTIVEC)
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- #include <altivec.h>
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- #endif
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-
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- #if !defined(SIMDE_AVX512VL_NATIVE) && defined(SIMDE_ENABLE_NATIVE_ALIASES)
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- #define SIMDE_AVX512VL_ENABLE_NATIVE_ALIASES
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- #endif
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- SIMDE__BEGIN_DECLS
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-
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- SIMDE__FUNCTION_ATTRIBUTES
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- simde__m128i
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- simde_mm_cvtsepi16_epi8 (simde__m128i a) {
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- #if defined(SIMDE_AVX512VL_NATIVE) && defined(SIMDE_AVX512BW_NATIVE)
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- return _mm_cvtsepi16_epi8(a);
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- #else
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- simde__m128i_private r_ = simde__m128i_to_private(simde_mm_setzero_si128());;
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- simde__m128i_private a_ = simde__m128i_to_private(a);
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-
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- SIMDE__VECTORIZE
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- for (size_t i = 0 ; i < (sizeof(a_.i16) / sizeof(a_.i16[0])) ; i++) {
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- r_.i8[i] =
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- (a_.i16[i] < INT8_MIN)
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- ? (INT8_MIN)
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- : ((a_.i16[i] > INT8_MAX)
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- ? (INT8_MAX)
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- : HEDLEY_STATIC_CAST(int8_t, a_.i16[i]));
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- }
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-
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- return simde__m128i_from_private(r_);
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- #endif
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- }
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- #if defined(SIMDE_AVX512VL_ENABLE_NATIVE_ALIASES)
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- #define _mm_cvtsepi16_epi8(a) simde_mm_cvtsepi16_epi8(a)
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- #endif
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-
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- SIMDE__FUNCTION_ATTRIBUTES
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- simde__m128i
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- simde_mm256_cvtsepi16_epi8 (simde__m256i a) {
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- #if defined(SIMDE_AVX512VL_NATIVE) && defined(SIMDE_AVX512BW_NATIVE)
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- return _mm256_cvtsepi16_epi8(a);
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- #else
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- simde__m128i_private r_;
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- simde__m256i_private a_ = simde__m256i_to_private(a);
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-
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- SIMDE__VECTORIZE
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- for (size_t i = 0 ; i < (sizeof(r_.i8) / sizeof(r_.i8[0])) ; i++) {
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- r_.i8[i] =
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- (a_.i16[i] < INT8_MIN)
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- ? (INT8_MIN)
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- : ((a_.i16[i] > INT8_MAX)
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- ? (INT8_MAX)
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- : HEDLEY_STATIC_CAST(int8_t, a_.i16[i]));
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- }
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-
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- return simde__m128i_from_private(r_);
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- #endif
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- }
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- #if defined(SIMDE_AVX512VL_ENABLE_NATIVE_ALIASES)
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- #define _mm256_cvtsepi16_epi8(a) simde_mm256_cvtsepi16_epi8(a)
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- #endif
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-
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- SIMDE__END_DECLS
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-
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- HEDLEY_DIAGNOSTIC_POP
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-
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- #endif /* !defined(SIMDE__AVX512VL_H) */