mdarray 0.5.5.2-java → 0.5.6-java

data/doc/Const.html

@@ -6,18 +6,18 @@
 <title>
   Class: Const
   
-    &mdash; Documentation by YARD 0.8.5.2
+    &mdash; Documentation by YARD 0.8.7.6
   
 </title>
 
-  <link rel="stylesheet" href="css/style.css" type="text/css" media="screen" charset="utf-8" />
+  <link rel="stylesheet" href="css/style.css" type="text/css" charset="utf-8" />
 
-  <link rel="stylesheet" href="css/common.css" type="text/css" media="screen" charset="utf-8" />
+  <link rel="stylesheet" href="css/common.css" type="text/css" charset="utf-8" />
 
 <script type="text/javascript" charset="utf-8">
   hasFrames = window.top.frames.main ? true : false;
   relpath = '';
-  framesUrl = "frames.html#!" + escape(window.location.href);
+  framesUrl = "frames.html#!Const.html";
 </script>
 
 
@@ -151,6 +151,30 @@
         <li class="public ">
   <span class="summary_signature">
     
+      <a href="#get-instance_method" title="#get (instance method)">- (Object) <strong>get</strong>(index) </a>
+    
+
+    
+  </span>
+  
+  
+  
+  
+  
+  
+  
+
+  
+    <span class="summary_desc"><div class='inline'>
+<p>---------------------------------------------------------------------------------------.</p>
+</div></span>
+  
+</li>
+
+      
+        <li class="public ">
+  <span class="summary_signature">
+    
       <a href="#get_current-instance_method" title="#get_current (instance method)">- (Object) <strong>get_current</strong> </a>
     
 
@@ -166,7 +190,7 @@
 
   
     <span class="summary_desc"><div class='inline'>
-<p>?????????????????????????????.</p>
+<p>---------------------------------------------------------------------------------------.</p>
 </div></span>
   
 </li>
@@ -190,7 +214,7 @@
 
   
     <span class="summary_desc"><div class='inline'>
-<p>?????????????????????????????.</p>
+<p>---------------------------------------------------------------------------------------.</p>
 </div></span>
   
 </li>
@@ -214,7 +238,7 @@
 
   
     <span class="summary_desc"><div class='inline'>
-<p>?????????????????????????????.</p>
+<p>---------------------------------------------------------------------------------------.</p>
 </div></span>
   
 </li>
@@ -240,7 +264,7 @@
 
   
     <span class="summary_desc"><div class='inline'>
-<p>?????????????????????????????.</p>
+<p>---------------------------------------------------------------------------------------.</p>
 </div></span>
   
 </li>
@@ -263,8 +287,8 @@
   
 </h3><div class="docstring">
   <div class="discussion">
-    <hr style="height: 10px">
-<hr style="height: 10px">
+    <hr>
+<hr>
 
 
   </div>
@@ -285,10 +309,9 @@
     <td>
       <pre class="code"><span class="info file"># File 'lib/mdarray/operators.rb', line 39</span>
 
-<span class='rubyid_def def kw'>def</span> <span class='rubyid_initialize identifier id'>initialize</span><span class='lparen token'>(</span><span class='rubyid_value identifier id'>value</span><span class='rparen token'>)</span>
-  <span class='rubyid_@value ivar id'>@value</span> <span class='assign token'>=</span> <span class='rubyid_value identifier id'>value</span>
-<span class='rubyid_end end kw'>end</span>
-</pre>
+<span class='kw'>def</span> <span class='id identifier rubyid_initialize'>initialize</span><span class='lparen'>(</span><span class='id identifier rubyid_value'>value</span><span class='rparen'>)</span>
+  <span class='ivar'>@value</span> <span class='op'>=</span> <span class='id identifier rubyid_value'>value</span>
+<span class='kw'>end</span></pre>
     </td>
   </tr>
 </table>
@@ -334,10 +357,9 @@
     <td>
       <pre class="code"><span class="info file"># File 'lib/mdarray/operators.rb', line 33</span>
 
-<span class='rubyid_def def kw'>def</span> <span class='rubyid_value identifier id'>value</span>
-  <span class='rubyid_@value ivar id'>@value</span>
-<span class='rubyid_end end kw'>end</span>
-</pre>
+<span class='kw'>def</span> <span class='id identifier rubyid_value'>value</span>
+  <span class='ivar'>@value</span>
+<span class='kw'>end</span></pre>
     </td>
   </tr>
 </table>
@@ -351,7 +373,48 @@
 
     
       <div class="method_details first">
-  <h3 class="signature first" id="get_current-instance_method">
+  <h3 class="signature first" id="get-instance_method">
+  
+    - (<tt>Object</tt>) <strong>get</strong>(index) 
+  
+
+  
+
+  
+</h3><div class="docstring">
+  <div class="discussion">
+    <hr>
+<hr>
+
+
+  </div>
+</div>
+<div class="tags">
+  
+
+</div><table class="source_code">
+  <tr>
+    <td>
+      <pre class="lines">
+
+
+55
+56
+57</pre>
+    </td>
+    <td>
+      <pre class="code"><span class="info file"># File 'lib/mdarray/operators.rb', line 55</span>
+
+<span class='kw'>def</span> <span class='id identifier rubyid_get'>get</span><span class='lparen'>(</span><span class='id identifier rubyid_index'>index</span><span class='rparen'>)</span>
+  <span class='ivar'>@value</span>
+<span class='kw'>end</span></pre>
+    </td>
+  </tr>
+</table>
+</div>
+    
+      <div class="method_details ">
+  <h3 class="signature " id="get_current-instance_method">
   
     - (<tt>Object</tt>) <strong>get_current</strong> 
   
@@ -361,8 +424,8 @@
   
 </h3><div class="docstring">
   <div class="discussion">
-    <hr style="height: 10px">
-<hr style="height: 10px">
+    <hr>
+<hr>
 
 
   </div>
@@ -376,17 +439,16 @@
       <pre class="lines">
 
 
-63
-64
-65</pre>
+71
+72
+73</pre>
     </td>
     <td>
-      <pre class="code"><span class="info file"># File 'lib/mdarray/operators.rb', line 63</span>
+      <pre class="code"><span class="info file"># File 'lib/mdarray/operators.rb', line 71</span>
 
-<span class='rubyid_def def kw'>def</span> <span class='rubyid_get_current identifier id'>get_current</span>
-  <span class='rubyid_@value ivar id'>@value</span>
-<span class='rubyid_end end kw'>end</span>
-</pre>
+<span class='kw'>def</span> <span class='id identifier rubyid_get_current'>get_current</span>
+  <span class='ivar'>@value</span>
+<span class='kw'>end</span></pre>
     </td>
   </tr>
 </table>
@@ -403,8 +465,8 @@
   
 </h3><div class="docstring">
   <div class="discussion">
-    <hr style="height: 10px">
-<hr style="height: 10px">
+    <hr>
+<hr>
 
 
   </div>
@@ -425,10 +487,9 @@
     <td>
       <pre class="code"><span class="info file"># File 'lib/mdarray/operators.rb', line 47</span>
 
-<span class='rubyid_def def kw'>def</span> <span class='rubyid_get_iterator_fast identifier id'>get_iterator_fast</span>
-  <span class='rubyid_return return kw'>return</span> <span class='rubyid_self self kw'>self</span>
-<span class='rubyid_end end kw'>end</span>
-</pre>
+<span class='kw'>def</span> <span class='id identifier rubyid_get_iterator_fast'>get_iterator_fast</span>
+  <span class='kw'>return</span> <span class='kw'>self</span>
+<span class='kw'>end</span></pre>
     </td>
   </tr>
 </table>
@@ -445,8 +506,8 @@
   
 </h3><div class="docstring">
   <div class="discussion">
-    <hr style="height: 10px">
-<hr style="height: 10px">
+    <hr>
+<hr>
 
 
   </div>
@@ -460,17 +521,16 @@
       <pre class="lines">
 
 
-55
-56
-57</pre>
+63
+64
+65</pre>
     </td>
     <td>
-      <pre class="code"><span class="info file"># File 'lib/mdarray/operators.rb', line 55</span>
+      <pre class="code"><span class="info file"># File 'lib/mdarray/operators.rb', line 63</span>
 
-<span class='rubyid_def def kw'>def</span> <span class='rubyid_get_next identifier id'>get_next</span>
-  <span class='rubyid_@value ivar id'>@value</span>
-<span class='rubyid_end end kw'>end</span>
-</pre>
+<span class='kw'>def</span> <span class='id identifier rubyid_get_next'>get_next</span>
+  <span class='ivar'>@value</span>
+<span class='kw'>end</span></pre>
     </td>
   </tr>
 </table>
@@ -481,9 +541,9 @@
 </div>
 
     <div id="footer">
-  Generated on Thu May 16 12:48:41 2013 by
+  Generated on Tue Jul 14 18:09:10 2015 by
   <a href="http://yardoc.org" title="Yay! A Ruby Documentation Tool" target="_parent">yard</a>
-  0.8.5.2 (ruby-1.9.3).
+  0.8.7.6 (ruby-1.9.3).
 </div>
 
   </body>

data/doc/Csv.html

@@ -6,18 +6,18 @@
 <title>
   Class: Csv
   
-    &mdash; Documentation by YARD 0.8.5.2
+    &mdash; Documentation by YARD 0.8.7.6
   
 </title>
 
-  <link rel="stylesheet" href="css/style.css" type="text/css" media="screen" charset="utf-8" />
+  <link rel="stylesheet" href="css/style.css" type="text/css" charset="utf-8" />
 
-  <link rel="stylesheet" href="css/common.css" type="text/css" media="screen" charset="utf-8" />
+  <link rel="stylesheet" href="css/common.css" type="text/css" charset="utf-8" />
 
 <script type="text/javascript" charset="utf-8">
   hasFrames = window.top.frames.main ? true : false;
   relpath = '';
-  framesUrl = "frames.html#!" + escape(window.location.href);
+  framesUrl = "frames.html#!Csv.html";
 </script>
 
 
@@ -99,6 +99,16 @@
 </dl>
 <div class="clear"></div>
 
+<h2>Defined Under Namespace</h2>
+<p class="children">
+  
+    
+  
+    
+      <strong class="classes">Classes:</strong> <span class='object_link'><a href="Csv/Dimension.html" title="Csv::Dimension (class)">Dimension</a></span>, <span class='object_link'><a href="Csv/Dimensions.html" title="Csv::Dimensions (class)">Dimensions</a></span>
+    
+  
+</p>
 
 
 
@@ -243,6 +253,30 @@
         <li class="public ">
   <span class="summary_signature">
     
+      <a href="#read_file-class_method" title="read_file (class method)">+ (Object) <strong>read_file</strong>(filename, options = {}) </a>
+    
+
+    
+  </span>
+  
+  
+  
+  
+  
+  
+  
+
+  
+    <span class="summary_desc"><div class='inline'>
+<p>------------------------------------------------------------------------------------.</p>
+</div></span>
+  
+</li>
+
+      
+        <li class="public ">
+  <span class="summary_signature">
+    
       <a href="#read_numeric-class_method" title="read_numeric (class method)">+ (Object) <strong>read_numeric</strong>(filename, headers = false) </a>
     
 
@@ -258,7 +292,7 @@
 
   
     <span class="summary_desc"><div class='inline'>
-<p>????????????????????????????.</p>
+<p>------------------------------------------------------------------------------------.</p>
 </div></span>
   
 </li>
@@ -299,17 +333,16 @@
       <pre class="lines">
 
 
-13
-14
-15</pre>
+34
+35
+36</pre>
     </td>
     <td>
-      <pre class="code"><span class="info file"># File 'lib/mdarray/csv.rb', line 13</span>
+      <pre class="code"><span class="info file"># File 'lib/mdarray/csv.rb', line 34</span>
 
-<span class='rubyid_def def kw'>def</span> <span class='rubyid_epoch identifier id'>epoch</span>
-  <span class='rubyid_@epoch ivar id'>@epoch</span>
-<span class='rubyid_end end kw'>end</span>
-</pre>
+<span class='kw'>def</span> <span class='id identifier rubyid_epoch'>epoch</span>
+  <span class='ivar'>@epoch</span>
+<span class='kw'>end</span></pre>
     </td>
   </tr>
 </table>
@@ -348,17 +381,16 @@
       <pre class="lines">
 
 
-6
-7
-8</pre>
+27
+28
+29</pre>
     </td>
     <td>
-      <pre class="code"><span class="info file"># File 'lib/mdarray/csv.rb', line 6</span>
+      <pre class="code"><span class="info file"># File 'lib/mdarray/csv.rb', line 27</span>
 
-<span class='rubyid_def def kw'>def</span> <span class='rubyid_col_sep identifier id'>col_sep</span>
-  <span class='rubyid_@col_sep ivar id'>@col_sep</span>
-<span class='rubyid_end end kw'>end</span>
-</pre>
+<span class='kw'>def</span> <span class='id identifier rubyid_col_sep'>col_sep</span>
+  <span class='ivar'>@col_sep</span>
+<span class='kw'>end</span></pre>
     </td>
   </tr>
 </table>
@@ -392,17 +424,16 @@
       <pre class="lines">
 
 
-8
-9
-10</pre>
+29
+30
+31</pre>
     </td>
     <td>
-      <pre class="code"><span class="info file"># File 'lib/mdarray/csv.rb', line 8</span>
+      <pre class="code"><span class="info file"># File 'lib/mdarray/csv.rb', line 29</span>
 
-<span class='rubyid_def def kw'>def</span> <span class='rubyid_quote_char identifier id'>quote_char</span>
-  <span class='rubyid_@quote_char ivar id'>@quote_char</span>
-<span class='rubyid_end end kw'>end</span>
-</pre>
+<span class='kw'>def</span> <span class='id identifier rubyid_quote_char'>quote_char</span>
+  <span class='ivar'>@quote_char</span>
+<span class='kw'>end</span></pre>
     </td>
   </tr>
 </table>
@@ -436,17 +467,16 @@
       <pre class="lines">
 
 
-7
-8
-9</pre>
+28
+29
+30</pre>
     </td>
     <td>
-      <pre class="code"><span class="info file"># File 'lib/mdarray/csv.rb', line 7</span>
+      <pre class="code"><span class="info file"># File 'lib/mdarray/csv.rb', line 28</span>
 
-<span class='rubyid_def def kw'>def</span> <span class='rubyid_row_sep identifier id'>row_sep</span>
-  <span class='rubyid_@row_sep ivar id'>@row_sep</span>
-<span class='rubyid_end end kw'>end</span>
-</pre>
+<span class='kw'>def</span> <span class='id identifier rubyid_row_sep'>row_sep</span>
+  <span class='ivar'>@row_sep</span>
+<span class='kw'>end</span></pre>
     </td>
   </tr>
 </table>
@@ -460,7 +490,186 @@
 
     
       <div class="method_details first">
-  <h3 class="signature first" id="read_numeric-class_method">
+  <h3 class="signature first" id="read_file-class_method">
+  
+    + (<tt>Object</tt>) <strong>read_file</strong>(filename, options = {}) 
+  
+
+  
+
+  
+</h3><div class="docstring">
+  <div class="discussion">
+    <hr>
+<hr>
+
+
+  </div>
+</div>
+<div class="tags">
+  
+
+</div><table class="source_code">
+  <tr>
+    <td>
+      <pre class="lines">
+
+
+198
+199
+200
+201
+202
+203
+204
+205
+206
+207
+208
+209
+210
+211
+212
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+215
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+261
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+264
+265
+266
+267
+268
+269</pre>
+    </td>
+    <td>
+      <pre class="code"><span class="info file"># File 'lib/mdarray/csv.rb', line 198</span>
+
+<span class='kw'>def</span> <span class='kw'>self</span><span class='period'>.</span><span class='id identifier rubyid_read_file'>read_file</span><span class='lparen'>(</span><span class='id identifier rubyid_filename'>filename</span><span class='comma'>,</span> <span class='id identifier rubyid_options'>options</span> <span class='op'>=</span> <span class='lbrace'>{</span><span class='rbrace'>}</span><span class='rparen'>)</span>
+
+  <span class='id identifier rubyid_buffer'>buffer</span> <span class='op'>=</span> <span class='const'>Array</span><span class='period'>.</span><span class='id identifier rubyid_new'>new</span>
+  <span class='id identifier rubyid_heading'>heading</span> <span class='op'>=</span> <span class='const'>Array</span><span class='period'>.</span><span class='id identifier rubyid_new'>new</span>
+  <span class='id identifier rubyid_lines'>lines</span> <span class='op'>=</span> <span class='int'>0</span>
+  <span class='id identifier rubyid_columns'>columns</span> <span class='op'>=</span> <span class='kw'>nil</span>
+
+  <span class='comment'># user has to set the headers to true if the file has headers, however, we will force
+</span>  <span class='comment'># it to false for reading in order to get an array for each line.
+</span>  <span class='id identifier rubyid_hds'>hds</span> <span class='op'>=</span> <span class='id identifier rubyid_options'>options</span><span class='lbracket'>[</span><span class='symbol'>:headers</span><span class='rbracket'>]</span>
+  <span class='comment'># Get the dimensions on the file
+</span>  <span class='id identifier rubyid_dimensions_names'>dimensions_names</span> <span class='op'>=</span> <span class='id identifier rubyid_options'>options</span><span class='period'>.</span><span class='id identifier rubyid_delete'>delete</span><span class='lparen'>(</span><span class='symbol'>:dimensions</span><span class='rparen'>)</span>
+  <span class='id identifier rubyid_dimensions'>dimensions</span> <span class='op'>=</span> <span class='const'>Dimensions</span><span class='period'>.</span><span class='id identifier rubyid_new'>new</span><span class='lparen'>(</span><span class='id identifier rubyid_dimensions_names'>dimensions_names</span><span class='rparen'>)</span>
+  
+  <span class='id identifier rubyid_opts'>opts</span> <span class='op'>=</span> <span class='lbrace'>{</span><span class='label'>converters:</span> <span class='lbracket'>[</span><span class='symbol'>:numeric</span><span class='comma'>,</span> <span class='symbol'>:date</span><span class='rbracket'>]</span><span class='comma'>,</span> <span class='label'>return_headers:</span> <span class='kw'>true</span><span class='rbrace'>}</span> <span class='comment'>#, headers: false}
+</span>  <span class='id identifier rubyid_opts'>opts</span> <span class='op'>=</span> <span class='id identifier rubyid_options'>options</span><span class='period'>.</span><span class='id identifier rubyid_merge'>merge</span><span class='lparen'>(</span><span class='id identifier rubyid_opts'>opts</span><span class='rparen'>)</span>
+  
+  <span class='comment'># open the file for reading
+</span>  <span class='const'>CSV</span><span class='period'>.</span><span class='id identifier rubyid_open'>open</span><span class='lparen'>(</span><span class='id identifier rubyid_filename'>filename</span><span class='comma'>,</span> <span class='id identifier rubyid_opts'>opts</span><span class='rparen'>)</span> <span class='kw'>do</span> <span class='op'>|</span><span class='id identifier rubyid_csv'>csv</span><span class='op'>|</span>
+
+    <span class='comment'># if file has headers then read the first line
+</span>    <span class='kw'>if</span> <span class='id identifier rubyid_hds'>hds</span>
+      <span class='id identifier rubyid_i'>i</span> <span class='op'>=</span> <span class='int'>0</span>
+      <span class='id identifier rubyid_header'>header</span> <span class='op'>=</span> <span class='id identifier rubyid_csv'>csv</span><span class='period'>.</span><span class='id identifier rubyid_shift'>shift</span><span class='period'>.</span><span class='id identifier rubyid_to_hash'>to_hash</span>
+      <span class='id identifier rubyid_header'>header</span><span class='period'>.</span><span class='id identifier rubyid_each_pair'>each_pair</span> <span class='kw'>do</span> <span class='op'>|</span><span class='id identifier rubyid_key'>key</span><span class='comma'>,</span> <span class='id identifier rubyid_value'>value</span><span class='op'>|</span>
+        <span class='id identifier rubyid_header'>header</span><span class='lbracket'>[</span><span class='id identifier rubyid_key'>key</span><span class='rbracket'>]</span> <span class='op'>=</span> <span class='id identifier rubyid_i'>i</span>
+        <span class='id identifier rubyid_i'>i</span> <span class='op'>+=</span> <span class='int'>1</span>
+      <span class='kw'>end</span>
+    <span class='kw'>end</span>
+
+    <span class='id identifier rubyid_raise'>raise</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>Dimension(s) </span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_dimensions_names'>dimensions_names</span><span class='rbrace'>}</span><span class='tstring_content'> are not all in the header </span><span class='embexpr_beg'>#{</span><span class='id identifier rubyid_header'>header</span><span class='rbrace'>}</span><span class='tstring_end'>&quot;</span></span>       <span class='kw'>\
+</span>if <span class='op'>!</span><span class='lparen'>(</span><span class='id identifier rubyid_dimensions_names'>dimensions_names</span> <span class='op'>-</span> <span class='id identifier rubyid_header'>header</span><span class='period'>.</span><span class='id identifier rubyid_keys'>keys</span><span class='period'>.</span><span class='id identifier rubyid_to_a'>to_a</span><span class='rparen'>)</span><span class='period'>.</span><span class='id identifier rubyid_empty?'>empty?</span>
+
+    <span class='id identifier rubyid_dimensions'>dimensions</span><span class='period'>.</span><span class='id identifier rubyid_dimensions'>dimensions</span><span class='lbracket'>[</span><span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>Columns</span><span class='tstring_end'>&quot;</span></span><span class='rbracket'>]</span> <span class='op'>=</span> <span class='id identifier rubyid_header'>header</span>
+
+    <span class='id identifier rubyid_csv'>csv</span><span class='period'>.</span><span class='id identifier rubyid_each'>each</span> <span class='kw'>do</span> <span class='op'>|</span><span class='id identifier rubyid_row'>row</span><span class='op'>|</span>
+      <span class='comment'># columns is initialized with the first row.size
+</span>      <span class='id identifier rubyid_columns'>columns</span> <span class='op'>||=</span> <span class='id identifier rubyid_row'>row</span><span class='period'>.</span><span class='id identifier rubyid_size'>size</span>
+      <span class='id identifier rubyid_lines'>lines</span> <span class='op'>+=</span> <span class='int'>1</span>
+      <span class='comment'># every row should have the same number of columns
+</span>      <span class='kw'>if</span> <span class='lparen'>(</span><span class='id identifier rubyid_row'>row</span><span class='period'>.</span><span class='id identifier rubyid_size'>size</span> <span class='op'>!=</span> <span class='id identifier rubyid_columns'>columns</span><span class='rparen'>)</span>
+        <span class='id identifier rubyid_raise'>raise</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>Data does not have the same number of columns for all lines</span><span class='tstring_end'>&quot;</span></span>
+      <span class='kw'>end</span>
+      <span class='comment'># delete dimensions from data and store them on their proper dimension
+</span>      <span class='id identifier rubyid_dimensions_names'>dimensions_names</span><span class='period'>.</span><span class='id identifier rubyid_each'>each</span> <span class='kw'>do</span> <span class='op'>|</span><span class='id identifier rubyid_name'>name</span><span class='op'>|</span>
+        <span class='id identifier rubyid_dimensions'>dimensions</span><span class='lbracket'>[</span><span class='id identifier rubyid_name'>name</span><span class='rbracket'>]</span> <span class='op'>=</span> <span class='id identifier rubyid_row'>row</span><span class='period'>.</span><span class='id identifier rubyid_delete'>delete</span><span class='lparen'>(</span><span class='id identifier rubyid_name'>name</span><span class='rparen'>)</span>
+      <span class='kw'>end</span>
+
+      <span class='comment'># p row
+</span>      <span class='id identifier rubyid_row'>row</span><span class='period'>.</span><span class='id identifier rubyid_each'>each</span> <span class='kw'>do</span> <span class='op'>|</span><span class='id identifier rubyid_data'>data</span><span class='op'>|</span>
+        <span class='comment'># if it is a Date, then convert it to seconds since epoch
+</span>        <span class='kw'>if</span> <span class='lparen'>(</span><span class='id identifier rubyid_data'>data</span><span class='lbracket'>[</span><span class='int'>1</span><span class='rbracket'>]</span><span class='period'>.</span><span class='id identifier rubyid_is_a?'>is_a?</span> <span class='const'>Date</span><span class='rparen'>)</span>
+          <span class='id identifier rubyid_buffer'>buffer</span> <span class='op'>&lt;&lt;</span> <span class='id identifier rubyid_data'>data</span><span class='lbracket'>[</span><span class='int'>1</span><span class='rbracket'>]</span><span class='period'>.</span><span class='id identifier rubyid_to_time'>to_time</span><span class='period'>.</span><span class='id identifier rubyid_to_i'>to_i</span>
+        <span class='kw'>end</span>
+        <span class='comment'># if it is numeric then just add it to the buffer
+</span>        <span class='kw'>if</span> <span class='lparen'>(</span><span class='id identifier rubyid_data'>data</span><span class='lbracket'>[</span><span class='int'>1</span><span class='rbracket'>]</span><span class='period'>.</span><span class='id identifier rubyid_is_a?'>is_a?</span> <span class='const'>Numeric</span><span class='rparen'>)</span>
+          <span class='id identifier rubyid_buffer'>buffer</span> <span class='op'>&lt;&lt;</span> <span class='id identifier rubyid_data'>data</span><span class='lbracket'>[</span><span class='int'>1</span><span class='rbracket'>]</span>
+        <span class='kw'>end</span>
+      <span class='kw'>end</span>
+      
+    <span class='kw'>end</span>
+
+    <span class='comment'># reset all dimensions
+</span>    <span class='id identifier rubyid_dimensions_names'>dimensions_names</span><span class='period'>.</span><span class='id identifier rubyid_each'>each</span> <span class='kw'>do</span> <span class='op'>|</span><span class='id identifier rubyid_name'>name</span><span class='op'>|</span>
+      <span class='id identifier rubyid_dimensions'>dimensions</span><span class='lbracket'>[</span><span class='id identifier rubyid_name'>name</span><span class='rbracket'>]</span><span class='period'>.</span><span class='id identifier rubyid_reset'>reset</span>
+    <span class='kw'>end</span>
+    
+    <span class='lbracket'>[</span><span class='id identifier rubyid_lines'>lines</span><span class='comma'>,</span> <span class='id identifier rubyid_columns'>columns</span><span class='comma'>,</span> <span class='id identifier rubyid_buffer'>buffer</span><span class='comma'>,</span> <span class='id identifier rubyid_header'>header</span><span class='comma'>,</span> <span class='id identifier rubyid_dimensions'>dimensions</span><span class='rbracket'>]</span>
+    
+  <span class='kw'>end</span>
+  
+<span class='kw'>end</span></pre>
+    </td>
+  </tr>
+</table>
+</div>
+    
+      <div class="method_details ">
+  <h3 class="signature " id="read_numeric-class_method">
   
     + (<tt>Object</tt>) <strong>read_numeric</strong>(filename, headers = false) 
   
@@ -470,8 +679,8 @@
   
 </h3><div class="docstring">
   <div class="discussion">
-    <hr style="height: 10px">
-<hr style="height: 10px">
+    <hr>
+<hr>
 
 
   </div>
@@ -485,91 +694,94 @@
       <pre class="lines">
 
 
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     </td>
     <td>
-      <pre class="code"><span class="info file"># File 'lib/mdarray/csv.rb', line 20</span>
+      <pre class="code"><span class="info file"># File 'lib/mdarray/csv.rb', line 275</span>
 
-<span class='rubyid_def def kw'>def</span> <span class='rubyid_self self kw'>self</span><span class='dot token'>.</span><span class='rubyid_read_numeric identifier id'>read_numeric</span><span class='lparen token'>(</span><span class='rubyid_filename identifier id'>filename</span><span class='comma token'>,</span> <span class='rubyid_headers identifier id'>headers</span> <span class='assign token'>=</span> <span class='rubyid_false false kw'>false</span><span class='rparen token'>)</span>
+<span class='kw'>def</span> <span class='kw'>self</span><span class='period'>.</span><span class='id identifier rubyid_read_numeric'>read_numeric</span><span class='lparen'>(</span><span class='id identifier rubyid_filename'>filename</span><span class='comma'>,</span> <span class='id identifier rubyid_headers'>headers</span> <span class='op'>=</span> <span class='kw'>false</span><span class='rparen'>)</span>
 
-  <span class='rubyid_buffer identifier id'>buffer</span> <span class='assign token'>=</span> <span class='rubyid_Array constant id'>Array</span><span class='dot token'>.</span><span class='rubyid_new identifier id'>new</span>
-  <span class='rubyid_lines identifier id'>lines</span> <span class='assign token'>=</span> <span class='integer val'>0</span>
-  <span class='rubyid_columns identifier id'>columns</span> <span class='assign token'>=</span> <span class='rubyid_nil nil kw'>nil</span>
+  <span class='id identifier rubyid_buffer'>buffer</span> <span class='op'>=</span> <span class='const'>Array</span><span class='period'>.</span><span class='id identifier rubyid_new'>new</span>
+  <span class='id identifier rubyid_heading'>heading</span> <span class='op'>=</span> <span class='const'>Array</span><span class='period'>.</span><span class='id identifier rubyid_new'>new</span>
+  <span class='id identifier rubyid_lines'>lines</span> <span class='op'>=</span> <span class='int'>0</span>
+  <span class='id identifier rubyid_columns'>columns</span> <span class='op'>=</span> <span class='kw'>nil</span>
 
-  <span class='rubyid_CSV constant id'>CSV</span><span class='dot token'>.</span><span class='rubyid_foreach identifier id'>foreach</span><span class='lparen token'>(</span><span class='rubyid_filename identifier id'>filename</span><span class='comma token'>,</span>  
-              <span class='lbrace token'>{</span><span class='rubyid_return_headers identifier id'>return_headers</span><span class='colon op'>:</span> <span class='rubyid_false false kw'>false</span><span class='comma token'>,</span> 
-                <span class='comment val'># headers: true,</span>
-                <span class='rubyid_converters identifier id'>converters</span><span class='colon op'>:</span> <span class='lbrack token'>[</span><span class='symbol val'>:numeric</span><span class='comma token'>,</span> <span class='symbol val'>:date</span><span class='rbrack token'>]</span><span class='rbrace token'>}</span> <span class='rparen token'>)</span> <span class='rubyid_do do kw'>do</span> <span class='bitor op'>|</span><span class='rubyid_row identifier id'>row</span><span class='bitor op'>|</span>
+  <span class='const'>CSV</span><span class='period'>.</span><span class='id identifier rubyid_foreach'>foreach</span><span class='lparen'>(</span><span class='id identifier rubyid_filename'>filename</span><span class='comma'>,</span>  
+              <span class='lbrace'>{</span><span class='label'>return_headers:</span> <span class='kw'>false</span><span class='comma'>,</span> 
+                <span class='comment'># headers: true,
+</span>                <span class='label'>converters:</span> <span class='lbracket'>[</span><span class='symbol'>:numeric</span><span class='comma'>,</span> <span class='symbol'>:date</span><span class='rbracket'>]</span><span class='rbrace'>}</span> <span class='rparen'>)</span> <span class='kw'>do</span> <span class='op'>|</span><span class='id identifier rubyid_row'>row</span><span class='op'>|</span>
 
-    <span class='rubyid_if if kw'>if</span> <span class='lparen token'>(</span><span class='rubyid_headers identifier id'>headers</span><span class='rparen token'>)</span>
-      <span class='rubyid_headers identifier id'>headers</span> <span class='assign token'>=</span> <span class='rubyid_false false kw'>false</span>
-      <span class='rubyid_next next kw'>next</span>
-    <span class='rubyid_end end kw'>end</span>
+    <span class='kw'>if</span> <span class='lparen'>(</span><span class='id identifier rubyid_headers'>headers</span><span class='rparen'>)</span>
+      <span class='id identifier rubyid_headers'>headers</span> <span class='op'>=</span> <span class='kw'>false</span>
+      <span class='id identifier rubyid_heading'>heading</span> <span class='op'>&lt;&lt;</span> <span class='id identifier rubyid_row'>row</span>
+      <span class='kw'>next</span>
+    <span class='kw'>end</span>
 
-    <span class='rubyid_columns identifier id'>columns</span> <span class='opasgn op'>||=</span> <span class='rubyid_row identifier id'>row</span><span class='dot token'>.</span><span class='rubyid_size identifier id'>size</span>
-    <span class='rubyid_lines identifier id'>lines</span> <span class='opasgn op'>+=</span> <span class='integer val'>1</span>
+    <span class='id identifier rubyid_columns'>columns</span> <span class='op'>||=</span> <span class='id identifier rubyid_row'>row</span><span class='period'>.</span><span class='id identifier rubyid_size'>size</span>
+    <span class='id identifier rubyid_lines'>lines</span> <span class='op'>+=</span> <span class='int'>1</span>
 
-    <span class='rubyid_row identifier id'>row</span><span class='dot token'>.</span><span class='rubyid_each identifier id'>each</span> <span class='rubyid_do do kw'>do</span> <span class='bitor op'>|</span><span class='rubyid_data identifier id'>data</span><span class='bitor op'>|</span>
+    <span class='id identifier rubyid_row'>row</span><span class='period'>.</span><span class='id identifier rubyid_each'>each</span> <span class='kw'>do</span> <span class='op'>|</span><span class='id identifier rubyid_data'>data</span><span class='op'>|</span>
 
-      <span class='rubyid_if if kw'>if</span> <span class='lparen token'>(</span><span class='rubyid_row identifier id'>row</span><span class='dot token'>.</span><span class='rubyid_size identifier id'>size</span> <span class='neq op'>!=</span> <span class='rubyid_columns identifier id'>columns</span><span class='rparen token'>)</span>
-        <span class='rubyid_raise identifier id'>raise</span> <span class='string val'>&quot;Data does not have the same number of columns for all lines&quot;</span>
-      <span class='rubyid_end end kw'>end</span>
+      <span class='kw'>if</span> <span class='lparen'>(</span><span class='id identifier rubyid_row'>row</span><span class='period'>.</span><span class='id identifier rubyid_size'>size</span> <span class='op'>!=</span> <span class='id identifier rubyid_columns'>columns</span><span class='rparen'>)</span>
+        <span class='id identifier rubyid_raise'>raise</span> <span class='tstring'><span class='tstring_beg'>&quot;</span><span class='tstring_content'>Data does not have the same number of columns for all lines</span><span class='tstring_end'>&quot;</span></span>
+      <span class='kw'>end</span>
 
-      <span class='comment val'># if it is a Date, then convert it to seconds since epoch</span>
-      <span class='rubyid_if if kw'>if</span> <span class='lparen token'>(</span><span class='rubyid_data identifier id'>data</span><span class='dot token'>.</span><span class='rubyid_is_a? fid id'>is_a?</span> <span class='rubyid_Date constant id'>Date</span><span class='rparen token'>)</span>
-        <span class='rubyid_buffer identifier id'>buffer</span> <span class='lshft op'>&lt;&lt;</span> <span class='rubyid_data identifier id'>data</span><span class='dot token'>.</span><span class='rubyid_to_time identifier id'>to_time</span><span class='dot token'>.</span><span class='rubyid_to_i identifier id'>to_i</span>
-      <span class='rubyid_end end kw'>end</span>
+      <span class='comment'># if it is a Date, then convert it to seconds since epoch
+</span>      <span class='kw'>if</span> <span class='lparen'>(</span><span class='id identifier rubyid_data'>data</span><span class='period'>.</span><span class='id identifier rubyid_is_a?'>is_a?</span> <span class='const'>Date</span><span class='rparen'>)</span>
+        <span class='id identifier rubyid_buffer'>buffer</span> <span class='op'>&lt;&lt;</span> <span class='id identifier rubyid_data'>data</span><span class='period'>.</span><span class='id identifier rubyid_to_time'>to_time</span><span class='period'>.</span><span class='id identifier rubyid_to_i'>to_i</span>
+      <span class='kw'>end</span>
 
-      <span class='rubyid_if if kw'>if</span> <span class='lparen token'>(</span><span class='rubyid_data identifier id'>data</span><span class='dot token'>.</span><span class='rubyid_is_a? fid id'>is_a?</span> <span class='rubyid_Numeric constant id'>Numeric</span><span class='rparen token'>)</span>
-        <span class='rubyid_buffer identifier id'>buffer</span> <span class='lshft op'>&lt;&lt;</span> <span class='rubyid_data identifier id'>data</span>
-      <span class='rubyid_end end kw'>end</span>
-    <span class='rubyid_end end kw'>end</span>
+      <span class='kw'>if</span> <span class='lparen'>(</span><span class='id identifier rubyid_data'>data</span><span class='period'>.</span><span class='id identifier rubyid_is_a?'>is_a?</span> <span class='const'>Numeric</span><span class='rparen'>)</span>
+        <span class='id identifier rubyid_buffer'>buffer</span> <span class='op'>&lt;&lt;</span> <span class='id identifier rubyid_data'>data</span>
+      <span class='kw'>end</span>
+    <span class='kw'>end</span>
 
-  <span class='rubyid_end end kw'>end</span>
+  <span class='kw'>end</span>
 
-  <span class='lbrack token'>[</span><span class='rubyid_lines identifier id'>lines</span><span class='comma token'>,</span> <span class='rubyid_columns identifier id'>columns</span><span class='comma token'>,</span> <span class='rubyid_buffer identifier id'>buffer</span><span class='rbrack token'>]</span>
+  <span class='lbracket'>[</span><span class='id identifier rubyid_lines'>lines</span><span class='comma'>,</span> <span class='id identifier rubyid_columns'>columns</span><span class='comma'>,</span> <span class='id identifier rubyid_buffer'>buffer</span><span class='comma'>,</span> <span class='id identifier rubyid_heading'>heading</span><span class='rbracket'>]</span>
 
-<span class='rubyid_end end kw'>end</span>
-</pre>
+<span class='kw'>end</span></pre>
     </td>
   </tr>
 </table>
@@ -580,9 +792,9 @@
 </div>
 
     <div id="footer">
-  Generated on Thu May 16 12:48:37 2013 by
+  Generated on Tue Jul 14 18:09:00 2015 by
   <a href="http://yardoc.org" title="Yay! A Ruby Documentation Tool" target="_parent">yard</a>
-  0.8.5.2 (ruby-1.9.3).
+  0.8.7.6 (ruby-1.9.3).
 </div>
 
   </body>