iroki 0.0.25 → 0.0.26
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- checksums.yaml +4 -4
- data/.gitignore +3 -1
- data/README.md +4 -0
- data/lib/iroki/core_ext/file/file.rb +12 -0
- data/lib/iroki/main/main.rb +3 -0
- data/lib/iroki/version.rb +1 -1
- metadata +2 -2
checksums.yaml
CHANGED
@@ -1,7 +1,7 @@
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1
1
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---
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2
2
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SHA1:
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3
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-
metadata.gz:
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4
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-
data.tar.gz:
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3
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+
metadata.gz: 9cf667ad18dfe8bbbbe321c56bcda4c7cb308fd9
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4
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+
data.tar.gz: 637d39d6337b01a3e91bb194fdd6ead4ec4293c4
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5
5
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SHA512:
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6
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-
metadata.gz:
|
7
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-
data.tar.gz:
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6
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+
metadata.gz: 91d870557644bf808a515af2c31d930a2e707dcfeff79f97ca377b0641725727bb7942fa6d9b9258afa5a77d187fbbeee90785b4e8814fb8ccb32b3311a71fd1
|
7
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+
data.tar.gz: 27f6130d57b4d6222f4f5d0f3b3a797f963775796ab2d253c9c3bad72b54577e42604c41f236f1fb3f77746cf4b7ecb4874efbae2004fd8c9f22e6440b168290
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data/.gitignore
CHANGED
data/README.md
CHANGED
@@ -37,6 +37,18 @@ end
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37
37
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module Iroki
|
38
38
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module CoreExt
|
39
39
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module File
|
40
|
+
# @note Only checks that first and last chars off the file
|
41
|
+
# (minus trailing newlines) are correct. I.e., first char is
|
42
|
+
# '(' and last char is ';'
|
43
|
+
def valid_newick? fname
|
44
|
+
str = Object::File.read(fname).chomp
|
45
|
+
first_char = str[0]
|
46
|
+
last_char = str[-1]
|
47
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+
|
48
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+
p [:ryan, first_char, last_char]
|
49
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+
first_char == "(" && last_char == ";"
|
50
|
+
end
|
51
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+
|
40
52
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def check_file arg, which
|
41
53
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help = " Try iroki --help for help."
|
42
54
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data/lib/iroki/main/main.rb
CHANGED
@@ -214,6 +214,9 @@ module Iroki
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214
214
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|
215
215
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newick = check_file newick_f, :newick
|
216
216
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|
217
|
+
abort_unless valid_newick?(newick_f),
|
218
|
+
"The Newick file doesn't look like a real Newick file"
|
219
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+
|
217
220
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abort_if out_f.nil?,
|
218
221
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"--outfile is a required arg. Try iroki --help for help."
|
219
222
|
|
data/lib/iroki/version.rb
CHANGED
metadata
CHANGED
@@ -1,14 +1,14 @@
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|
1
1
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--- !ruby/object:Gem::Specification
|
2
2
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name: iroki
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 0.0.
|
4
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+
version: 0.0.26
|
5
5
|
platform: ruby
|
6
6
|
authors:
|
7
7
|
- Ryan Moore
|
8
8
|
autorequire:
|
9
9
|
bindir: exe
|
10
10
|
cert_chain: []
|
11
|
-
date: 2016-09-
|
11
|
+
date: 2016-09-23 00:00:00.000000000 Z
|
12
12
|
dependencies:
|
13
13
|
- !ruby/object:Gem::Dependency
|
14
14
|
name: bundler
|